View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15587_low_17 (Length: 319)
Name: NF15587_low_17
Description: NF15587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15587_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 313
Target Start/End: Complemental strand, 25001121 - 25000829
Alignment:
| Q |
18 |
gaaactgccataatctcatggcgcaaaatccccaacctcaaatgcgacgtcgtttcacccaattcctattcccctctccgccataacgccacactcatct |
117 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25001121 |
gaaaccgccataatctcatggcgcaaaatccccaacctcaaatgcgacgtcgtttcacccaattcctattcccctctccgccataacgccacactcatct |
25001022 |
T |
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| Q |
118 |
tctcctccaccaccaccgtagacaccaaattcgcctctatctccgtcgcagaagccaaaattcacaaccatttcgctccgacgccgtctcagcttctcaa |
217 |
Q |
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||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25001021 |
tcttctccaccacc---gtagacaccaaattcgcctctatctccgtcgcagaagccaaaattcacaaccatttcgctccgacgccgtctcagcttctcaa |
25000925 |
T |
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| Q |
218 |
acacccactcgctgcattagcgtttgttcctagagatgccgctctcttcgccgccggagcattcgccggcgctgctgctaagacgttctctgctcc |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
25000924 |
acacccactcgctgcattagcgtttgttcctagagatgccgctctcttcgccgccggagcattcgccggcgctgctgctaagacgttcactgctcc |
25000829 |
T |
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