View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15588_high_4 (Length: 328)
Name: NF15588_high_4
Description: NF15588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15588_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 6467861 - 6468048
Alignment:
| Q |
1 |
cggtgaaattgaaataaatgaaaataaagtcatagcaaatcaatttaggaaaataagagtttttgtaggaggccgtaaggccactagtggaagattttga |
100 |
Q |
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| T |
6467861 |
cggtgaaattgaaataaatgaaaataaaatcatagcaaatcaatttaggaaaataagagtttttgtaggaggccgtaaggccactagtggaagattttga |
6467960 |
T |
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| Q |
101 |
tttgcaaatctttatttcttgattttgtaagtgtgaccctttaattaatattacatacaataaatttttattccgtagataaaatgaga |
189 |
Q |
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| T |
6467961 |
tttgcaaatctttatttcttgattttgtaagtgtgaccctttaattaatattacatacaat-aattttttttccgtagataaaatgaga |
6468048 |
T |
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