View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15588_low_8 (Length: 277)
Name: NF15588_low_8
Description: NF15588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15588_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 4441286 - 4441030
Alignment:
| Q |
5 |
ttggttacattcaattgcttacatatttgcaaagtattatcaaggttgacagggcgtgtgtaagtgtttcatagatttaggagattaattgctccttaaa |
104 |
Q |
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| T |
4441286 |
ttggttacattcaattgcttacatatttgcaaagtattatcaaggttgacagggcgtgtgtaagtgtttcatagatttaggagattaattgctccttaaa |
4441187 |
T |
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| Q |
105 |
aatattcagatatttgcgatggatatcaatgaagaagtatccactgaagtcctaacctttgctacgacagaacctctgctctccacatatctacaactac |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4441186 |
aatattcagatatttgcgatggatatcaatgaagaagtatccactgaagtcctaacctttgctacgacagaacctctgctctccacatatctacaactac |
4441087 |
T |
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| Q |
205 |
agtttttctctgattcgatggtgttgactatacaaagaaatcacggagtgattttta |
261 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4441086 |
agtttttctctgcttcgatggtgttgactatacaaagaaatcacggagtgattttta |
4441030 |
T |
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