View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15589_high_30 (Length: 295)
Name: NF15589_high_30
Description: NF15589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15589_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 8936966 - 8937255
Alignment:
| Q |
1 |
tccttgttccttgataaatttgtcataagtttcaaatgcatgactctctacgcattctgaaaagtgatctgcacttgcaatgaatcataaacacatatca |
100 |
Q |
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| T |
8936966 |
tccttgttccttgataaatttgtcataagtttcaaatgcatgactctctacgcattctgaaaagtgatctgcacttgcaatgaatcataaacacatatca |
8937065 |
T |
|
| Q |
101 |
gaaattgaagaaccaagcagacaggttggaatgctagaatgtgtaattcagtaaaacatggtacttttgattatttagcaaaagcaaactaggtcagtct |
200 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
8937066 |
gatattgaagaaccaagcagacaggttggaatgctagaatgtgtaattcagtaaaacatggtacttttgattatttagcaaaagcaaactagatcagtct |
8937165 |
T |
|
| Q |
201 |
gtacatgtcatctcatatacttccaaataagtgccaatttttcatttggcctctttgaaacttatcatacgcttggaacttcatctcact |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| |
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| T |
8937166 |
gtacatgtcatctcatatacttccaaataagtgccaatttttcatttggtctctttgaaacttatcatatgcttggaacttcatgtcact |
8937255 |
T |
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