View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15589_low_14 (Length: 486)

Name: NF15589_low_14
Description: NF15589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15589_low_14
NF15589_low_14
[»] chr1 (22 HSPs)
chr1 (15-278)||(49632071-49632334)
chr1 (353-419)||(49631931-49631997)
chr1 (16-56)||(9768864-9768904)
chr1 (16-56)||(18003816-18003856)
chr1 (16-56)||(42908771-42908811)
chr1 (16-58)||(195042-195084)
chr1 (15-49)||(5862135-5862169)
chr1 (15-56)||(7015741-7015782)
chr1 (15-55)||(9769634-9769674)
chr1 (16-56)||(18179328-18179368)
chr1 (16-56)||(52961137-52961177)
chr1 (16-55)||(47645851-47645890)
chr1 (16-58)||(1721138-1721180)
chr1 (15-45)||(3569055-3569085)
chr1 (16-49)||(3341791-3341824)
chr1 (16-56)||(9527425-9527466)
chr1 (16-61)||(37262160-37262205)
chr1 (16-65)||(43020602-43020651)
chr1 (16-49)||(50575908-50575941)
chr1 (16-56)||(7906381-7906421)
chr1 (16-56)||(9004346-9004386)
chr1 (16-56)||(41677060-41677100)
[»] chr4 (17 HSPs)
chr4 (16-65)||(20610730-20610779)
chr4 (16-56)||(20166316-20166356)
chr4 (16-56)||(49039500-49039540)
chr4 (16-58)||(56915-56957)
chr4 (16-56)||(38657540-38657580)
chr4 (16-56)||(41492553-41492593)
chr4 (15-46)||(12585613-12585644)
chr4 (16-58)||(1589212-1589254)
chr4 (16-46)||(42432018-42432048)
chr4 (16-56)||(36008274-36008315)
chr4 (16-56)||(48512198-48512239)
chr4 (16-55)||(9084759-9084799)
chr4 (16-56)||(27921896-27921936)
chr4 (16-56)||(36045830-36045870)
chr4 (16-56)||(43049988-43050028)
chr4 (16-56)||(49319393-49319433)
chr4 (16-56)||(54854234-54854274)
[»] chr3 (17 HSPs)
chr3 (16-62)||(30745786-30745832)
chr3 (16-56)||(12236599-12236639)
chr3 (16-56)||(16874245-16874285)
chr3 (16-59)||(4010073-4010116)
chr3 (16-49)||(12143462-12143495)
chr3 (16-49)||(51017797-51017830)
chr3 (16-56)||(3973302-3973342)
chr3 (16-56)||(3996534-3996574)
chr3 (16-56)||(19137619-19137659)
chr3 (16-56)||(40160735-40160775)
chr3 (16-59)||(3993762-3993805)
chr3 (17-56)||(38507648-38507687)
chr3 (15-49)||(23237369-23237403)
chr3 (15-56)||(3461778-3461819)
chr3 (16-45)||(51412045-51412074)
chr3 (16-56)||(24130559-24130599)
chr3 (16-56)||(44592000-44592040)
[»] scaffold0712 (1 HSPs)
scaffold0712 (16-56)||(4520-4560)
[»] scaffold0709 (1 HSPs)
scaffold0709 (16-56)||(4540-4580)
[»] scaffold0168 (1 HSPs)
scaffold0168 (16-56)||(34088-34128)
[»] chr7 (16 HSPs)
chr7 (16-64)||(8147241-8147289)
chr7 (16-56)||(17305445-17305485)
chr7 (15-64)||(41012635-41012684)
chr7 (16-56)||(3246541-3246581)
chr7 (15-58)||(1513485-1513528)
chr7 (16-49)||(10020524-10020557)
chr7 (16-49)||(19924774-19924807)
chr7 (16-56)||(21285408-21285449)
chr7 (16-49)||(35195850-35195883)
chr7 (17-46)||(38032911-38032940)
chr7 (16-56)||(7392361-7392401)
chr7 (16-56)||(7465466-7465506)
chr7 (16-56)||(11808038-11808078)
chr7 (16-56)||(25304178-25304218)
chr7 (16-56)||(32814827-32814867)
chr7 (16-56)||(37410536-37410576)
[»] chr6 (15 HSPs)
chr6 (16-56)||(34524875-34524915)
chr6 (16-55)||(8309165-8309204)
chr6 (16-49)||(9031773-9031806)
chr6 (17-56)||(9422833-9422872)
chr6 (16-55)||(30833018-30833057)
chr6 (16-46)||(4844153-4844183)
chr6 (16-46)||(20858438-20858468)
chr6 (16-56)||(2945595-2945636)
chr6 (16-49)||(17176156-17176189)
chr6 (16-56)||(28970167-28970208)
chr6 (17-49)||(6219361-6219393)
chr6 (16-56)||(8175996-8176036)
chr6 (16-56)||(10455742-10455782)
chr6 (16-56)||(19135929-19135969)
chr6 (16-56)||(22730757-22730797)
[»] chr5 (13 HSPs)
chr5 (16-56)||(11246549-11246589)
chr5 (16-55)||(38040267-38040306)
chr5 (16-49)||(42781649-42781682)
chr5 (16-56)||(25660912-25660952)
chr5 (16-56)||(35813297-35813337)
chr5 (17-56)||(3535992-3536031)
chr5 (15-56)||(17557030-17557071)
chr5 (16-57)||(41405143-41405184)
chr5 (17-49)||(17178278-17178310)
chr5 (16-56)||(20186866-20186906)
chr5 (17-49)||(31280602-31280634)
chr5 (16-56)||(36742022-36742062)
chr5 (16-56)||(40250232-40250272)
[»] chr8 (17 HSPs)
chr8 (16-58)||(14011093-14011135)
chr8 (16-58)||(26657854-26657896)
chr8 (16-65)||(216202-216251)
chr8 (16-65)||(220417-220466)
chr8 (16-65)||(689572-689621)
chr8 (16-65)||(692762-692811)
chr8 (16-65)||(696971-697020)
chr8 (16-65)||(729825-729874)
chr8 (16-65)||(734040-734089)
chr8 (16-65)||(853720-853769)
chr8 (16-65)||(857936-857985)
chr8 (16-56)||(39432383-39432423)
chr8 (16-56)||(7345428-7345468)
chr8 (16-56)||(29937210-29937250)
chr8 (17-49)||(32940370-32940402)
chr8 (17-49)||(36593201-36593233)
chr8 (15-59)||(43554446-43554490)
[»] chr2 (12 HSPs)
chr2 (15-56)||(36277756-36277797)
chr2 (15-49)||(6496446-6496480)
chr2 (16-61)||(20684266-20684311)
chr2 (19-56)||(22355083-22355120)
chr2 (16-45)||(34376553-34376582)
chr2 (16-61)||(36386168-36386213)
chr2 (16-49)||(44132618-44132651)
chr2 (16-56)||(2057481-2057521)
chr2 (16-56)||(5772860-5772900)
chr2 (16-56)||(14307749-14307789)
chr2 (16-60)||(25071206-25071250)
chr2 (16-56)||(39118393-39118433)
[»] scaffold2098 (1 HSPs)
scaffold2098 (15-58)||(667-711)
[»] scaffold0054 (1 HSPs)
scaffold0054 (15-55)||(67162-67202)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 49632334 - 49632071
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcacagaaacaaaattacatcgatttaaatcacactttctggtcaaaattgtcactaatatt 114  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49632334 acatataacaatgcatgtccctgccaattgagctacgctcacggaaacaaaattacatcgatttaaatcacacttactggtcaaaattgtcactaatatt 49632235  T
Q  115 caccactaaatattgttttgcagttttaataaatgttgtaaatttgttcgtttagtagttttctattacaaatcatgtatgcagatttagaaatataaat 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49632234 caccactaaatattgttttgcagttttaataaatgtagtaaatttgttcgtttagcagttttctattacaaatcatgtatgcagatttagaaatataaat 49632135  T
Q  215 atgacagtgtttcattaagctaggttcaaatattctctttgcgatccttgtcatccttagatag 278  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49632134 atgacagtgtttcattaagctaggttcaaatgttctctttgcgatccttgtcatccttagatag 49632071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 49631997 - 49631931
Alignment:
Q  353 gagaaaaattccagtgtttcacgttaaggtgcttaagtcagaagattagttctcaaaacgtgagcac 419  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  49631997 gagaaaaattccagtgtttcacgtttaggtgctgaagtcagaagattagttctcaaaacgcgagcac 49631931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 9768864 - 9768904
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  9768864 catataacaatgcatgtccctgccaactgagctatgctcac 9768904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 18003856 - 18003816
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  18003856 catataacaatgcatgtccctgccaactgagctatgctcac 18003816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 42908811 - 42908771
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  42908811 catataacaatgcatgtccctgccaactgagctaagctcac 42908771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 195084 - 195042
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacag 58  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  195084 catataattatgcatgtccctgccaactgagctacgctcacag 195042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 5862169 - 5862135
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagcta 49  Q
    |||||||||||||||||||||||||||||||||||    
T  5862169 acatataacaatgcatgtccctgccaactgagcta 5862135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 7015741 - 7015782
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  7015741 acatataacaatgcatgtcccagccaactgagctatgctcac 7015782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 9769634 - 9769674
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctca 55  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  9769634 acatataataatgcatgtccctgccaactgagctatgctca 9769674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 18179368 - 18179328
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  18179368 catataacaatgcatgtccctgccaactgagttatgctcac 18179328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 52961137 - 52961177
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  52961137 catataacaatgcatgtccttgccaactgagctatgctcac 52961177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 47645851 - 47645890
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctca 55  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  47645851 catataacaatgcatgtctctgccaactgagctatgctca 47645890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 1721180 - 1721138
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacag 58  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||    
T  1721180 catataacaatgcatgttcctaccaactgagctatgctcacag 1721138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 45
Target Start/End: Complemental strand, 3569085 - 3569055
Alignment:
Q  15 acatataacaatgcatgtccctgccaactga 45  Q
    |||||||||||||||||||||||||||||||    
T  3569085 acatataacaatgcatgtccctgccaactga 3569055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 3341791 - 3341824
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||| ||||||||||||||||||||||||||    
T  3341791 catataataatgcatgtccctgccaactgagcta 3341824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 9527466 - 9527425
Alignment:
Q  16 catataacaatgcat-gtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  9527466 catataacaatgcattgtccctgccaactgagctatgctcac 9527425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 37262160 - 37262205
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaa 61  Q
    |||||||||| ||||||||||||||||||| ||| |||||| ||||    
T  37262160 catataacaacgcatgtccctgccaactgaactatgctcacggaaa 37262205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 43020651 - 43020602
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    ||||||| ||||||||||||||||||| |||||| |||||| || |||||    
T  43020651 catataataatgcatgtccctgccaaccgagctatgctcaccgagacaaa 43020602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 50575941 - 50575908
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||||||||||||||||| ||||||||||||    
T  50575941 catataacaatgcatgtcccttccaactgagcta 50575908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 7906381 - 7906421
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||| |||||||| ||| ||||||    
T  7906381 catataacaatgcatgtccctaccaactgaactatgctcac 7906421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 9004386 - 9004346
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||  ||||||||||||||||||||| ||||||    
T  9004386 catataacaatatatgtccctgccaactgagctatgctcac 9004346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 41677100 - 41677060
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| |||| ||||| ||||||||||||||||||||||    
T  41677100 catataataatgaatgtctctgccaactgagctacgctcac 41677060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 20610779 - 20610730
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  20610779 catataacaatgcatgtccctgccaactgagctatgctcacagagacaaa 20610730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 20166356 - 20166316
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20166356 catataacaatgcatgtccctgccaactgagctacgctcac 20166316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 49039500 - 49039540
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  49039500 catataacaatgcatgtccctgccaactgagctatgctcac 49039540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 56915 - 56957
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacag 58  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  56915 catataacaatgcatgtccctgccaactgagttatgctcacag 56957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 38657580 - 38657540
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  38657580 catataacaatgcatgtccctgccaactgagccatgctcac 38657540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 41492553 - 41492593
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  41492553 catataataatgcatgtccctgccaactgagctatgctcac 41492593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 46
Target Start/End: Original strand, 12585613 - 12585644
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgag 46  Q
    ||||||||||||||||||||||||||||||||    
T  12585613 acatataacaatgcatgtccctgccaactgag 12585644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 1589212 - 1589254
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacag 58  Q
    |||||||||||||||||| | ||||||||||||| ||||||||    
T  1589212 catataacaatgcatgtcaccgccaactgagctatgctcacag 1589254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 42432048 - 42432018
Alignment:
Q  16 catataacaatgcatgtccctgccaactgag 46  Q
    |||||||||||||||||||||||||||||||    
T  42432048 catataacaatgcatgtccctgccaactgag 42432018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 36008315 - 36008274
Alignment:
Q  16 catataacaatgcat-gtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  36008315 catataacaatgcattgtccctgccaactgagctatgctcac 36008274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 48512239 - 48512198
Alignment:
Q  16 catataacaatgcat-gtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  48512239 catataacaatgcattgtccctgccaactgagctatgctcac 48512198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 9084799 - 9084759
Alignment:
Q  16 catataacaatgcat-gtccctgccaactgagctacgctca 55  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  9084799 catataacaatgcattgtccctgccaactgagctatgctca 9084759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 27921936 - 27921896
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| ||||||||||||| |||||||||||| ||||||    
T  27921936 catataataatgcatgtccctaccaactgagctatgctcac 27921896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 36045870 - 36045830
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||| ||| ||||||| ||||||    
T  36045870 catataacaatgcatgtccctgtcaattgagctatgctcac 36045830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 43049988 - 43050028
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    
T  43049988 catataacaatgcatgttcctgtcaactgagctatgctcac 43050028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 49319433 - 49319393
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| ||||||||||| |||||||||||||| ||||||    
T  49319433 catataataatgcatgtccatgccaactgagctatgctcac 49319393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 54854234 - 54854274
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||  ||||||||||||||||||||||||| ||||||    
T  54854234 catataattatgcatgtccctgccaactgagctatgctcac 54854274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 30745786 - 30745832
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaac 62  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||    
T  30745786 catataacaatgcatgtccctgccaactgagctatgctcacggaaac 30745832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 12236639 - 12236599
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  12236639 catataataatgcatgtccctgccaactgagctacgctcac 12236599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 16874245 - 16874285
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  16874245 catataacaatgcatgtccctgccaactgagctatgctcac 16874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 4010073 - 4010116
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacaga 59  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  4010073 catataacaatgcatgtccctaccaactgagctatgctcacaga 4010116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 12143462 - 12143495
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||||||||||||||||||||||||||||||    
T  12143462 catataacaatgcatgtccctgccaactgagcta 12143495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 51017830 - 51017797
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||||||||||||||||||||||||||||||    
T  51017830 catataacaatgcatgtccctgccaactgagcta 51017797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 3973342 - 3973302
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  3973342 catataacaatgcatgtccctaccaactgagctatgctcac 3973302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 3996534 - 3996574
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  3996534 catataacaatgcatgtccctaccaactgagctatgctcac 3996574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 19137659 - 19137619
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  19137659 catataacaatgcatgttcctgccaactgagctatgctcac 19137619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 40160775 - 40160735
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  40160775 catataacaatgcatgtccctgccaattgagctatgctcac 40160735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3993762 - 3993805
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacaga 59  Q
    |||||||||||||||||||||  ||||||||||| |||||||||    
T  3993762 catataacaatgcatgtccctctcaactgagctatgctcacaga 3993805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 38507687 - 38507648
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  38507687 atataataatgcatgtccctgccaactgagctatgctcac 38507648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 23237403 - 23237369
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagcta 49  Q
    |||||||| ||||||||||||||||||||||||||    
T  23237403 acatataataatgcatgtccctgccaactgagcta 23237369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 3461778 - 3461819
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||||| |||||||| || ||||||    
T  3461778 acatataacaatgcatgtccctgtcaactgagttatgctcac 3461819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 51412045 - 51412074
Alignment:
Q  16 catataacaatgcatgtccctgccaactga 45  Q
    ||||||||||||||||||||||||||||||    
T  51412045 catataacaatgcatgtccctgccaactga 51412074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 24130599 - 24130559
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  24130599 catataacaatgtatgtccctgccaactgagttatgctcac 24130559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 44592040 - 44592000
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||| ||| |||||||||||| ||||||    
T  44592040 catataacaatgcatgttcctaccaactgagctaagctcac 44592000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 4560 - 4520
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  4560 catataacaatgcatgtccctgccaactgagctatgctcac 4520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 4580 - 4540
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  4580 catataacaatgcatgtccctgccaactgagctatgctcac 4540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 34088 - 34128
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  34088 catataacaatgcatgtccctgccaactgagctatgctcac 34128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 8147241 - 8147289
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaa 64  Q
    |||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  8147241 catataacaatgcatgtccctgccaattgagctatgctcacggaaacaa 8147289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 17305445 - 17305485
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  17305445 catataacaatgcatgtccctgccaactgagctatgctcac 17305485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 41012635 - 41012684
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcacagaaacaa 64  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||| ||||    
T  41012635 acatataacaatgcatgtccctaccaattgagctatgctcacagagacaa 41012684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 3246541 - 3246581
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  3246541 catataacaatgcatgtccctgtcaactgagctatgctcac 3246581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 1513528 - 1513485
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcacag 58  Q
    |||||||||||||||||||||||||||||||  || ||||||||    
T  1513528 acatataacaatgcatgtccctgccaactgatttatgctcacag 1513485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 10020524 - 10020557
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    |||||||||||||||||||||| |||||||||||    
T  10020524 catataacaatgcatgtccctgtcaactgagcta 10020557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 19924807 - 19924774
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||| ||||||||||||||||||||||||||    
T  19924807 catataataatgcatgtccctgccaactgagcta 19924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 21285408 - 21285449
Alignment:
Q  16 catataacaatgcat-gtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  21285408 catataacaatgcattgtccctgccaactgagctatgctcac 21285449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 35195883 - 35195850
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||| ||||||||||||||||||||||||||    
T  35195883 catataataatgcatgtccctgccaactgagcta 35195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 38032911 - 38032940
Alignment:
Q  17 atataacaatgcatgtccctgccaactgag 46  Q
    ||||||||||||||||||||||||||||||    
T  38032911 atataacaatgcatgtccctgccaactgag 38032940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 7392361 - 7392401
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||| |||||||| ||||||| ||||||    
T  7392361 catataacaatgcatgttcctgccaattgagctatgctcac 7392401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 7465506 - 7465466
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| |||||||||| ||||||||||||||| ||||||    
T  7465506 catataataatgcatgtctctgccaactgagctatgctcac 7465466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 11808078 - 11808038
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||| |||| ||||||| ||||||    
T  11808078 catataacaatgcatgtccctaccaattgagctaagctcac 11808038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 25304218 - 25304178
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||| ||||| |||||||||||| ||||||||||    
T  25304218 catataacaattcatgttcctgccaactgaactacgctcac 25304178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 32814867 - 32814827
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| ||||||||||||| |||||||||||| ||||||    
T  32814867 catataataatgcatgtccctaccaactgagctatgctcac 32814827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 37410536 - 37410576
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||| | |||||||||||| ||||||    
T  37410536 catataacaatgcatgtccttaccaactgagctatgctcac 37410576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 34524915 - 34524875
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  34524915 catataacaatgcatgtccctgccaactgagctatgctcac 34524875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 8309204 - 8309165
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctca 55  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  8309204 catataacaatgcatgtccctgccaactgagctatgctca 8309165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 9031806 - 9031773
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||||||||||||||||||||||||||||||    
T  9031806 catataacaatgcatgtccctgccaactgagcta 9031773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 9422872 - 9422833
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  9422872 atataacaatgcatgtccctgccaactgagttatgctcac 9422833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 30833057 - 30833018
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctca 55  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  30833057 catataacaatgcatgtccctgccaactgaactatgctca 30833018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 4844183 - 4844153
Alignment:
Q  16 catataacaatgcatgtccctgccaactgag 46  Q
    |||||||||||||||||||||||||||||||    
T  4844183 catataacaatgcatgtccctgccaactgag 4844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 46
Target Start/End: Original strand, 20858438 - 20858468
Alignment:
Q  16 catataacaatgcatgtccctgccaactgag 46  Q
    |||||||||||||||||||||||||||||||    
T  20858438 catataacaatgcatgtccctgccaactgag 20858468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 2945636 - 2945595
Alignment:
Q  16 catataacaatgcat-gtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  2945636 catataacaatgcattgtccctgccaactgagctatgctcac 2945595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 17176189 - 17176156
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    |||||||||||||||||||||| |||||||||||    
T  17176189 catataacaatgcatgtccctgtcaactgagcta 17176156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 28970208 - 28970167
Alignment:
Q  16 catataacaatgcat-gtccctgccaactgagctacgctcac 56  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  28970208 catataacaatacattgtccctgccaactgagctacgctcac 28970167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 6219393 - 6219361
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagcta 49  Q
    |||||| ||||||||||||||||||||||||||    
T  6219393 atataataatgcatgtccctgccaactgagcta 6219361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 8176036 - 8175996
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||| ||| ||||||||||| ||||||    
T  8176036 catataacaatgcatgtctctgtcaactgagctatgctcac 8175996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 10455782 - 10455742
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||| |||||||||||| ||| ||||||    
T  10455782 catataacaatgcatgttcctgccaactgaactatgctcac 10455742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 19135969 - 19135929
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| ||||||||||||||||||| |||||| ||||||    
T  19135969 catataataatgcatgtccctgccaaccgagctatgctcac 19135929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 22730757 - 22730797
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||| |||||||||||| || ||||||    
T  22730757 catataacaatgcatgtctctgccaactgagttatgctcac 22730797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 11246549 - 11246589
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11246549 catataacaatgcatgtccctgccaactgagctatgctcac 11246589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 38040306 - 38040267
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctca 55  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  38040306 catataacaatgcatgtccctgccaactgagctatgctca 38040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 42781649 - 42781682
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||||||||||||||||||||||||||||||    
T  42781649 catataacaatgcatgtccctgccaactgagcta 42781682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 25660952 - 25660912
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  25660952 catataacaatgcatatccctgccaactgagctatgctcac 25660912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 35813297 - 35813337
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  35813297 catataacaatgcatgtccctgtcaactgagctatgctcac 35813337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 3535992 - 3536031
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  3535992 atataacaatgcatgtccctgccaactgaactatgctcac 3536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 17557071 - 17557030
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||| |||||||||||| || ||||||    
T  17557071 acatataacaatgcatgtctctgccaactgagttaggctcac 17557030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 41405143 - 41405184
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcaca 57  Q
    |||||||||||||||||||||| ||||||| ||| |||||||    
T  41405143 catataacaatgcatgtccctgtcaactgaactatgctcaca 41405184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 17178278 - 17178310
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||||||||||||||||| |||||||||||    
T  17178278 atataacaatgcatgtccctgtcaactgagcta 17178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 20186906 - 20186866
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  20186906 catataataatgcatgtccctgccaactgagcaatgctcac 20186866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 31280602 - 31280634
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagcta 49  Q
    |||||| ||||||||||||||||||||||||||    
T  31280602 atataataatgcatgtccctgccaactgagcta 31280634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 36742022 - 36742062
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||| |||||| ||||||||||||||| ||||||    
T  36742022 catataacaattcatgtctctgccaactgagctatgctcac 36742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 40250232 - 40250272
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||||  ||||||||||||||| ||||||    
T  40250232 catataacaatgcatgttactgccaactgagctatgctcac 40250272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 14011093 - 14011135
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacag 58  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  14011093 catataacaatgcatgtccctgccaactgaactatgctcacag 14011135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 26657896 - 26657854
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacag 58  Q
    ||||||||||||||||||||| |||||||||||| ||||||||    
T  26657896 catataacaatgcatgtccctaccaactgagctatgctcacag 26657854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 216202 - 216251
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||||||    
T  216202 catataacaatgtatgtccctgccaactgagctatgctcacgggaacaaa 216251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 220417 - 220466
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    ||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  220417 catataacattgcatgtccctgccaactgagctatgctcacgggaacaaa 220466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 689572 - 689621
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    ||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  689572 catataacattgcatgtccctgccaactgagctatgctcacgggaacaaa 689621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 692762 - 692811
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||||||    
T  692762 catataacaatgtatgtccctgccaactgagctatgctcacgggaacaaa 692811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 696971 - 697020
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||||||    
T  696971 catataacaatgtatgtccctgccaactgagctatgctcacgggaacaaa 697020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 729825 - 729874
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||||||    
T  729825 catataacaatgtatgtccctgccaactgagctatgctcacgggaacaaa 729874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 734040 - 734089
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    ||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  734040 catataacattgcatgtccctgccaactgagctatgctcacgggaacaaa 734089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 853720 - 853769
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    |||||||||||| ||||||||||||||||||||| |||||| | ||||||    
T  853720 catataacaatgtatgtccctgccaactgagctatgctcacgggaacaaa 853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 857936 - 857985
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaacaaa 65  Q
    ||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  857936 catataacattgcatgtccctgccaactgagctatgctcacgggaacaaa 857985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 39432383 - 39432423
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  39432383 catataacattgcatgtccctgccaactgagctatgctcac 39432423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 7345468 - 7345428
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||| ||||||||||||||||||||||| || ||||||    
T  7345468 catataataatgcatgtccctgccaactgagttatgctcac 7345428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 29937250 - 29937210
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||| ||||||||| |||||||||||| ||||||    
T  29937250 catataacaatacatgtccctaccaactgagctatgctcac 29937210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 32940370 - 32940402
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagcta 49  Q
    ||||||||||||||||||||| |||||||||||    
T  32940370 atataacaatgcatgtccctgtcaactgagcta 32940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 36593233 - 36593201
Alignment:
Q  17 atataacaatgcatgtccctgccaactgagcta 49  Q
    |||||||||||||||||||| ||||||||||||    
T  36593233 atataacaatgcatgtccctaccaactgagcta 36593201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 43554490 - 43554446
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcacaga 59  Q
    ||||||||||||| ||||| ||||||||||||||| | |||||||    
T  43554490 acatataacaatggatgtcgctgccaactgagctatgttcacaga 43554446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000007; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 36277756 - 36277797
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  36277756 acatataacaatgcatgtcactgccaactgagctatgctcac 36277797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 6496480 - 6496446
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagcta 49  Q
    |||||||||||||||||||||| ||||||||||||    
T  6496480 acatataacaatgcatgtcccttccaactgagcta 6496446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 20684311 - 20684266
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaa 61  Q
    ||||||| |||| ||||||||| ||||||||||| |||||||||||    
T  20684311 catataataatgtatgtccctgtcaactgagctaagctcacagaaa 20684266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 22355120 - 22355083
Alignment:
Q  19 ataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  22355120 ataacaatgcatgtccttgccaactgagctatgctcac 22355083  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 34376582 - 34376553
Alignment:
Q  16 catataacaatgcatgtccctgccaactga 45  Q
    ||||||||||||||||||||||||||||||    
T  34376582 catataacaatgcatgtccctgccaactga 34376553  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 36386168 - 36386213
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaaa 61  Q
    ||||||||||||||| ||||| |||||||||||| ||||| |||||    
T  36386168 catataacaatgcatatccctaccaactgagctatgctcatagaaa 36386213  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 44132618 - 44132651
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagcta 49  Q
    |||||||||||||||||| |||||||||||||||    
T  44132618 catataacaatgcatgtctctgccaactgagcta 44132651  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 2057521 - 2057481
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||| || |||||||||||||||||| ||||||    
T  2057521 catataacaatgtatatccctgccaactgagctatgctcac 2057481  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 5772900 - 5772860
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||| ||||||| |||||||||||||| ||||||    
T  5772900 catataacaatacatgtccttgccaactgagctatgctcac 5772860  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 14307749 - 14307789
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    ||||||||||||||||||||| |||||||||| | ||||||    
T  14307749 catataacaatgcatgtccctaccaactgagccatgctcac 14307789  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 25071250 - 25071206
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcacagaa 60  Q
    ||||||| |||||||||||||||||| |||||||  |||||||||    
T  25071250 catataataatgcatgtccctgccaattgagctatactcacagaa 25071206  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 39118433 - 39118393
Alignment:
Q  16 catataacaatgcatgtccctgccaactgagctacgctcac 56  Q
    |||||||||||| |||||||| ||||||||| |||||||||    
T  39118433 catataacaatgtatgtccctaccaactgagttacgctcac 39118393  T

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Target: scaffold2098 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 667 - 711
Alignment:
Q  15 acatataacaatgcat-gtccctgccaactgagctacgctcacag 58  Q
    |||||||||||||||| |||||||||||||||||||  |||||||    
T  667 acatataacaatgcattgtccctgccaactgagctatactcacag 711  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 67202 - 67162
Alignment:
Q  15 acatataacaatgcatgtccctgccaactgagctacgctca 55  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  67202 acatataacaatgcatatccctcccaactgagctatgctca 67162  T

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