View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15589_low_38 (Length: 272)
Name: NF15589_low_38
Description: NF15589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15589_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 33718770 - 33719014
Alignment:
| Q |
10 |
aagaaaatgtcactttcaacaagttgtctgttagtcatggaaggtaatttaatggtagctaggtggtagctgttgagcattcatgtgtataatgttgtgg |
109 |
Q |
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| T |
33718770 |
aagaaaatgtcactttcaacaagttgtctgttagtcatggaaggtaatttaatggtagctaggtggtagctgttgagcattcatgtgtttaatgttgtgg |
33718869 |
T |
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| Q |
110 |
tatcaagaaattttacctaactatgtagttgagtgcctgaaagtttaaaccccacaacctcctcttacccaccaagattagtatttatctattctcatca |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33718870 |
tatcaagaaattttacctaactatgtagttgagtgcctgaaagtttaaaacccacaacctcctcttacccaccaagattagtatttatctattctcatca |
33718969 |
T |
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| Q |
210 |
actcttgcatgatgaattttagggaaaatgtggtgtgggcactat |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33718970 |
actcttgcatgatgaattttagggaaaatgtggtgtgggcactat |
33719014 |
T |
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