View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15593_low_12 (Length: 220)
Name: NF15593_low_12
Description: NF15593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15593_low_12 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 32852679 - 32852861
Alignment:
| Q |
25 |
aaatgtactcacgctttactgaataggtatgcgttccccctccgacaatgaaacgcctgaaagaagggtgatcaaagattattaggatgatacaataatc |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32852679 |
aaatgtactcacgctttactgaataggtatgcgttccccctccgacaatgaaacgcctgaaagaagggtgatcaaagattattaggatgatacaataatc |
32852778 |
T |
|
| Q |
125 |
cagcagagaagttggaaacttcaagcgttttgtactggcaaaaaaccaagaaatatcattgaaagacactgctacagaataat |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32852779 |
cagcagagaagttggaaacttcaagcgttttgtactggcaaaaaaccaagaaatatcattgaaagacactgctacagaataat |
32852861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University