View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15594_high_1 (Length: 601)

Name: NF15594_high_1
Description: NF15594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15594_high_1
NF15594_high_1
[»] chr4 (36 HSPs)
chr4 (10-584)||(35871102-35871675)
chr4 (447-585)||(23350375-23350513)
chr4 (446-584)||(44471418-44471556)
chr4 (446-584)||(15306190-15306327)
chr4 (446-585)||(44470966-44471100)
chr4 (447-585)||(49998546-49998684)
chr4 (470-584)||(14572243-14572357)
chr4 (446-554)||(27578577-27578684)
chr4 (470-584)||(14571814-14571928)
chr4 (447-585)||(41869830-41869966)
chr4 (446-582)||(13266001-13266131)
chr4 (448-560)||(27579026-27579137)
chr4 (520-585)||(17028858-17028922)
chr4 (536-585)||(12692091-12692140)
chr4 (536-584)||(4127530-4127578)
chr4 (482-565)||(20309630-20309710)
chr4 (520-584)||(33987164-33987227)
chr4 (536-584)||(50398631-50398679)
chr4 (458-564)||(2682743-2682848)
chr4 (536-585)||(9423950-9423999)
chr4 (536-585)||(24629072-24629121)
chr4 (536-584)||(1645842-1645890)
chr4 (536-584)||(3169205-3169253)
chr4 (536-568)||(4127998-4128030)
chr4 (536-580)||(23942886-23942930)
chr4 (536-584)||(29628760-29628808)
chr4 (536-584)||(51331374-51331422)
chr4 (530-585)||(17029323-17029378)
chr4 (464-511)||(20305913-20305960)
chr4 (535-570)||(35477801-35477836)
chr4 (536-579)||(50399091-50399134)
chr4 (536-585)||(24629525-24629574)
chr4 (465-506)||(27029182-27029223)
chr4 (531-579)||(52048764-52048813)
chr4 (462-506)||(23942981-23943025)
chr4 (462-506)||(50398733-50398777)
[»] chr7 (29 HSPs)
chr7 (446-585)||(11517486-11517625)
chr7 (447-585)||(9124869-9125007)
chr7 (446-585)||(42515001-42515140)
chr7 (447-585)||(13125234-13125372)
chr7 (447-585)||(18833196-18833334)
chr7 (461-585)||(13124799-13124923)
chr7 (471-585)||(2941855-2941969)
chr7 (447-585)||(5406686-5406823)
chr7 (471-565)||(25182296-25182389)
chr7 (481-586)||(31406681-31406786)
chr7 (536-584)||(28495853-28495901)
chr7 (532-582)||(679812-679862)
chr7 (453-518)||(1628648-1628713)
chr7 (536-585)||(2193255-2193304)
chr7 (534-579)||(6747702-6747747)
chr7 (536-584)||(6719173-6719221)
chr7 (536-584)||(28495707-28495755)
chr7 (536-584)||(42515543-42515591)
chr7 (536-584)||(46425740-46425788)
chr7 (531-570)||(29039133-29039172)
chr7 (532-566)||(2611769-2611803)
chr7 (464-506)||(35474322-35474364)
chr7 (536-585)||(2189143-2189192)
chr7 (538-579)||(10430764-10430805)
chr7 (462-506)||(2189501-2189545)
chr7 (536-584)||(3305411-3305459)
chr7 (536-580)||(26957660-26957704)
chr7 (536-584)||(34405690-34405738)
chr7 (462-506)||(34405792-34405836)
[»] chr2 (21 HSPs)
chr2 (447-585)||(30966144-30966282)
chr2 (446-585)||(30966599-30966738)
chr2 (446-585)||(24818235-24818374)
chr2 (446-585)||(29259718-29259857)
chr2 (447-582)||(5399918-5400053)
chr2 (446-585)||(1953066-1953203)
chr2 (462-582)||(30961992-30962111)
chr2 (469-565)||(82952-83045)
chr2 (536-584)||(33174957-33175005)
chr2 (532-585)||(25338095-25338148)
chr2 (536-584)||(25434155-25434203)
chr2 (536-584)||(29804681-29804729)
chr2 (536-584)||(33174504-33174552)
chr2 (532-566)||(1912520-1912554)
chr2 (536-585)||(16379392-16379441)
chr2 (445-482)||(30963463-30963500)
chr2 (532-585)||(41754284-41754337)
chr2 (536-584)||(18098977-18099025)
chr2 (536-584)||(18448017-18448065)
chr2 (536-585)||(27883024-27883073)
chr2 (462-506)||(33174859-33174903)
[»] chr8 (28 HSPs)
chr8 (447-585)||(34309037-34309175)
chr8 (446-585)||(34308577-34308716)
chr8 (447-585)||(12100602-12100739)
chr8 (446-562)||(25147445-25147561)
chr8 (447-585)||(21316207-21316345)
chr8 (447-582)||(25144682-25144817)
chr8 (462-585)||(25147892-25148015)
chr8 (447-585)||(22705090-22705220)
chr8 (446-523)||(31283356-31283433)
chr8 (447-560)||(27819369-27819481)
chr8 (445-585)||(9250911-9251049)
chr8 (532-584)||(8080441-8080493)
chr8 (536-585)||(10844882-10844931)
chr8 (536-585)||(27925898-27925947)
chr8 (542-585)||(17103086-17103129)
chr8 (536-585)||(22026378-22026427)
chr8 (536-585)||(32292396-32292445)
chr8 (536-584)||(2044057-2044105)
chr8 (536-584)||(27022437-27022485)
chr8 (532-567)||(22840645-22840680)
chr8 (533-584)||(28453334-28453385)
chr8 (540-585)||(10844713-10844758)
chr8 (548-585)||(28375152-28375189)
chr8 (532-585)||(33852356-33852409)
chr8 (536-585)||(41659203-41659252)
chr8 (462-506)||(10844784-10844828)
chr8 (536-584)||(12827353-12827401)
chr8 (537-585)||(22548647-22548695)
[»] chr5 (29 HSPs)
chr5 (447-585)||(3887155-3887293)
chr5 (447-585)||(22556446-22556584)
chr5 (446-585)||(2474314-2474453)
chr5 (446-585)||(3886699-3886838)
chr5 (462-585)||(22556894-22557017)
chr5 (447-585)||(2473869-2474007)
chr5 (469-585)||(22975108-22975224)
chr5 (448-585)||(1821817-1821954)
chr5 (447-585)||(188990-189116)
chr5 (445-566)||(30684673-30684794)
chr5 (445-583)||(30719905-30720043)
chr5 (535-585)||(8642132-8642182)
chr5 (536-585)||(34867789-34867838)
chr5 (532-584)||(39146934-39146986)
chr5 (531-584)||(20039573-20039626)
chr5 (536-584)||(10927045-10927093)
chr5 (536-584)||(10927502-10927550)
chr5 (536-584)||(17445554-17445602)
chr5 (486-564)||(2058775-2058853)
chr5 (531-570)||(8391434-8391473)
chr5 (536-570)||(42788759-42788793)
chr5 (536-585)||(21886244-21886293)
chr5 (536-581)||(27646937-27646982)
chr5 (187-248)||(29582113-29582173)
chr5 (536-585)||(34371611-34371660)
chr5 (536-584)||(15513112-15513160)
chr5 (462-506)||(21886347-21886391)
chr5 (196-260)||(29612055-29612118)
chr5 (462-506)||(34371969-34372013)
[»] scaffold0007 (1 HSPs)
scaffold0007 (447-584)||(142373-142510)
[»] scaffold0020 (1 HSPs)
scaffold0020 (446-585)||(107561-107700)
[»] scaffold0018 (1 HSPs)
scaffold0018 (446-585)||(10209-10348)
[»] chr6 (27 HSPs)
chr6 (446-585)||(13492698-13492837)
chr6 (459-585)||(17731211-17731337)
chr6 (447-584)||(16519879-16520015)
chr6 (462-585)||(7912235-7912358)
chr6 (447-584)||(9351973-9352109)
chr6 (447-562)||(13191634-13191749)
chr6 (471-585)||(7911812-7911926)
chr6 (471-585)||(13490055-13490169)
chr6 (490-584)||(9440527-9440620)
chr6 (529-585)||(17027629-17027685)
chr6 (506-585)||(9440407-9440485)
chr6 (500-545)||(9440993-9441037)
chr6 (536-585)||(21311514-21311563)
chr6 (536-584)||(3652485-3652533)
chr6 (536-584)||(23986416-23986464)
chr6 (539-585)||(3652981-3653027)
chr6 (536-585)||(17850917-17850966)
chr6 (536-585)||(17851373-17851422)
chr6 (536-585)||(20850320-20850369)
chr6 (536-584)||(6331011-6331059)
chr6 (536-584)||(20896787-20896835)
chr6 (534-584)||(20126281-20126331)
chr6 (536-585)||(2681314-2681363)
chr6 (532-585)||(27334156-27334209)
chr6 (532-585)||(27394896-27394949)
chr6 (531-568)||(31821807-31821844)
chr6 (532-584)||(23776436-23776488)
[»] scaffold0024 (1 HSPs)
scaffold0024 (446-585)||(105629-105768)
[»] chr3 (24 HSPs)
chr3 (447-585)||(12820554-12820692)
chr3 (447-585)||(31284374-31284512)
chr3 (447-566)||(32388848-32388967)
chr3 (446-585)||(41473906-41474045)
chr3 (450-585)||(41472214-41472349)
chr3 (447-585)||(25248021-25248159)
chr3 (473-582)||(8067216-8067325)
chr3 (447-585)||(7477102-7477239)
chr3 (471-585)||(27187428-27187542)
chr3 (447-585)||(7493792-7493929)
chr3 (532-585)||(28561741-28561794)
chr3 (532-585)||(39653159-39653212)
chr3 (536-584)||(16811380-16811428)
chr3 (532-584)||(30529682-30529734)
chr3 (536-585)||(16810924-16810973)
chr3 (536-584)||(37045034-37045082)
chr3 (536-583)||(2911094-2911141)
chr3 (537-584)||(25230347-25230394)
chr3 (537-584)||(25237934-25237981)
chr3 (462-503)||(13150302-13150343)
chr3 (536-585)||(14813948-14813997)
chr3 (462-506)||(25238872-25238916)
chr3 (469-505)||(33466910-33466946)
chr3 (536-584)||(39640936-39640984)
[»] chr1 (35 HSPs)
chr1 (446-585)||(35759706-35759845)
chr1 (449-585)||(35761012-35761148)
chr1 (446-585)||(2328224-2328363)
chr1 (461-585)||(20061289-20061413)
chr1 (470-585)||(46693834-46693950)
chr1 (455-584)||(23180649-23180777)
chr1 (536-585)||(20054178-20054227)
chr1 (536-585)||(20054634-20054683)
chr1 (536-585)||(20055090-20055139)
chr1 (536-585)||(20055546-20055595)
chr1 (536-585)||(20056002-20056051)
chr1 (536-585)||(20056458-20056507)
chr1 (536-585)||(20057361-20057410)
chr1 (532-585)||(20057817-20057870)
chr1 (536-585)||(50003173-50003222)
chr1 (521-585)||(2634909-2634972)
chr1 (536-584)||(43057622-43057670)
chr1 (536-585)||(30873048-30873097)
chr1 (536-585)||(38340905-38340954)
chr1 (536-585)||(50002805-50002854)
chr1 (536-568)||(16452048-16452080)
chr1 (536-568)||(16461201-16461233)
chr1 (536-584)||(50002384-50002432)
chr1 (531-584)||(7548085-7548138)
chr1 (536-585)||(12883523-12883572)
chr1 (536-585)||(20845759-20845808)
chr1 (462-506)||(20054281-20054325)
chr1 (462-506)||(20054737-20054781)
chr1 (462-506)||(20055193-20055237)
chr1 (462-506)||(20055649-20055693)
chr1 (462-506)||(20056105-20056149)
chr1 (462-506)||(20056561-20056605)
chr1 (462-506)||(20057008-20057052)
chr1 (462-506)||(20057464-20057508)
chr1 (536-584)||(52250205-52250253)
[»] scaffold0022 (1 HSPs)
scaffold0022 (447-585)||(162776-162914)
[»] scaffold0040 (2 HSPs)
scaffold0040 (446-584)||(2309-2447)
scaffold0040 (447-499)||(2554-2606)
[»] scaffold0322 (2 HSPs)
scaffold0322 (465-585)||(18219-18339)
scaffold0322 (529-585)||(18958-19014)
[»] scaffold0005 (2 HSPs)
scaffold0005 (470-584)||(245019-245133)
scaffold0005 (470-584)||(245448-245562)
[»] scaffold0047 (2 HSPs)
scaffold0047 (532-584)||(18233-18285)
scaffold0047 (536-584)||(17697-17745)
[»] scaffold0557 (1 HSPs)
scaffold0557 (536-584)||(749-797)
[»] scaffold0168 (1 HSPs)
scaffold0168 (536-584)||(2741-2789)
[»] scaffold0664 (1 HSPs)
scaffold0664 (535-585)||(4080-4130)
[»] scaffold0333 (3 HSPs)
scaffold0333 (536-585)||(4560-4609)
scaffold0333 (536-585)||(5015-5064)
scaffold0333 (462-506)||(4917-4961)
[»] scaffold0243 (1 HSPs)
scaffold0243 (536-585)||(1219-1268)
[»] scaffold0088 (1 HSPs)
scaffold0088 (536-585)||(23672-23721)
[»] scaffold0002 (1 HSPs)
scaffold0002 (462-503)||(154659-154700)
[»] scaffold0442 (1 HSPs)
scaffold0442 (536-568)||(2504-2536)


Alignment Details
Target: chr4 (Bit Score: 502; Significance: 0; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 10 - 584
Target Start/End: Original strand, 35871102 - 35871675
Alignment:
Q  10 gcagagaaggaaggtagttcagcagaggctgtagagccgtcggaaatgaagcgcgtcttgacggaagaatcaatttgtaagtggaacatagctagctact 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35871102 gcagagaaggaaggtagttcagcagaggctgtagagccgtcggaaatgaagcgcgtcttgacggaagaatcaatttgtaagtggaacatagctagctact 35871201  T
Q  110 atttatgccttttgatttcgtatttgttgttgttgattgaagttannnnnnngcatccaaatagctatggagtaatgatatgcatgaatatttttagaag 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35871202 atttatgccttttgatttcgtatttgttgttgttgattgaagttatttttttgcatccaaatagctatggagtaatgatatgcatgaatatttttagaag 35871301  T
Q  210 aatatacatttagatttagattttaaatatatttaagataagatatcattaggaagtaatatagattcaaaattttgtttaagataattttaggatctgt 309  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35871302 aatatacatttagatttagatttgaaatatatttaagataagatatcattaggaagtaatatagattcaaaattttgtttaagataattttaggatttgt 35871401  T
Q  310 ttcttattttaaagannnnnnnnatatgccttttttgttaagaatatggttagcagaattgataataatagttatatgatctcattaaaaaacaatatca 409  Q
    |||||||||| ||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35871402 ttcttatttt-aattttttttttatatgccttttttgttaagaatatggttagcagaattgataataatagttatatgatctcattaaaaaacaatatca 35871500  T
Q  410 aaagaagtatctctggtgttttttgtcagaagctaaatgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccgg 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35871501 aaagaagtatctctggtgttttttgtcagaagctaaatgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccgg 35871600  T
Q  510 ctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35871601 ctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 35871675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 23350513 - 23350375
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23350513 tgtaacgcctccgcttggtgggcatgtaacgctcgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 23350414  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||| |||| |||||||||||||||| |||||||    
T  23350413 gaatgagagagatcttgaggccgtacaggtaggggactg 23350375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 446 - 584
Target Start/End: Complemental strand, 44471556 - 44471418
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  44471556 atgtaacacctctgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctagcatgcttctaggaaaaactgaatcacatc 44471457  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||| |||| |||||||||||||||||| ||||    
T  44471456 ggaatgagagagatcttgaggccgtacaggtatgagact 44471418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 446 - 584
Target Start/End: Complemental strand, 15306327 - 15306190
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||||    
T  15306327 atgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcgaggagtggtctggctcctggca-gcttctaggcaaaacagaaccacatc 15306229  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
     ||||||||||||||||||||| ||  ||||||||||||    
T  15306228 agaatgagagggatcctgaggctgtgtaggtatgggact 15306190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 446 - 585
Target Start/End: Complemental strand, 44471100 - 44470966
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||||||||||||     ||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44471100 atgtaacgcctccgcttggt-----tgtaacgcccgaggctaatgagggcggggagtggtccggctcctagcatgcttctaggcaaaactgaatcacatc 44471006  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||| |||| ||| || ||||| ||||| |||||    
T  44471005 ggaatgagagagatcatgacgctgtacaagtatgtgactg 44470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 49998546 - 49998684
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||| |||||||||||||||| ||   |||||||||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||    
T  49998546 tgtaacgcctccccttggtgggcatgtaaagctcaaggctgatgagggcggggagtggtccagctcttggcatgcttctagacaaaactaaatcacatcg 49998645  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||| |||| ||  ||| |||||||||    
T  49998646 gaatgagagggatcctaaggctgtgtaggcatgggactg 49998684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 470 - 584
Target Start/End: Complemental strand, 14572357 - 14572243
Alignment:
Q  470 atgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccg 569  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||  |||  ||||||||||||||||||||||||||||||||||     
T  14572357 atgtaacgcccaaggctgatgagggcggggagtggtccggctcttggcatgcatctagaaaaatatgaatcacatcggaatgagagggatcctgaggcca 14572258  T
Q  570 tacaggtatgggact 584  Q
    |  ||||||||||||    
T  14572257 tgtaggtatgggact 14572243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 554
Target Start/End: Complemental strand, 27578684 - 27578577
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||    
T  27578684 atgtaacacctccgcttggtgggcatgtaacactcgaggctgatgagggcggggagcggtccggctcctggca-gcttctaggcaaaaccgaatcatatc 27578586  T
Q  546 ggaatgaga 554  Q
     ||||||||    
T  27578585 agaatgaga 27578577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 584
Target Start/End: Complemental strand, 14571928 - 14571814
Alignment:
Q  470 atgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccg 569  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||  ||||| ||||||| |||| |||    
T  14571928 atgtaacacccgaggctgatgagggcggggagtggtccggctcctggcttggttctaggaaaaactgaatcacatcataatgaaagggatcttgagtccg 14571829  T
Q  570 tacaggtatgggact 584  Q
    |  ||||||||||||    
T  14571828 tgtaggtatgggact 14571814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 41869830 - 41869966
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||| ||||||||||   |||||| ||| || |||||||||| || ||||||  | |||||||||||||||| ||||||||||    
T  41869830 tgtaacgcctccgcttggtggacatgtaacgctcaaggctggtgacgg-ggggagtggtacgtctcctgtaa-gcttctaggcaaaactaaatcacatcg 41869927  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    || |||||||||||||||| | |||||  ||||||||||    
T  41869928 gagtgagagggatcctgagactgtacatatatgggactg 41869966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 446 - 582
Target Start/End: Original strand, 13266001 - 13266131
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||     |||||||||||| || ||||||  ||||| ||||||| ||||||||||     
T  13266001 atgtaacgcctccgcttggtgggcatgtaacgctcgaggctggtga-----gggagtggtccgacttctggca-acttctgggcaaaattgaatcacatt 13266094  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatggga 582  Q
     |||||||||||||| | | ||||| |||||||||||    
T  13266095 agaatgagagggatcttaaagccgtgcaggtatggga 13266131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 448 - 560
Target Start/End: Complemental strand, 27579137 - 27579026
Alignment:
Q  448 gtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcgg 547  Q
    ||||||||| || ||||||||||||||| ||  ||||||| |||||| ||||||||||||| ||| || || ||||||||| ||||| ||||||||||||    
T  27579137 gtaacgccttcgtttggtgggcatgtaatgctcgaggctggtgagggtggggagtggtccgactcttgaca-gcttctaggtaaaaccgaatcacatcgg 27579039  T
Q  548 aatgagagggatc 560  Q
    ||| |||||||||    
T  27579038 aataagagggatc 27579026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 520 - 585
Target Start/End: Original strand, 17028858 - 17028922
Alignment:
Q  520 gcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  17028858 gcttctaggcaaa-ctgaatcacatcggaatgagagggatcctgaagccttgcatgtatgggactg 17028922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 12692140 - 12692091
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  12692140 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 12692091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 4127578 - 4127530
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  4127578 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggact 4127530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 565
Target Start/End: Complemental strand, 20309710 - 20309630
Alignment:
Q  482 aggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgag 565  Q
    ||||||| ||||||||||| ||||| ||||| || || |||||||||  |||| ||||||||||||||||||||||||| ||||    
T  20309710 aggctgacgagggcggggattggtctggctcatgaca-gcttctagg--aaaccgaatcacatcggaatgagagggatcatgag 20309630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 584
Target Start/End: Complemental strand, 33987227 - 33987164
Alignment:
Q  520 gcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||| ||||    
T  33987227 gcttctaggcaaa-ctgaatcacatcggaatgagagggatcatgagatcgtgcaggtatgtgact 33987164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 50398679 - 50398631
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||    
T  50398679 gaatcacatcggaatgagagggatcctgaggccgtgtaggtataggact 50398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 564
Target Start/End: Complemental strand, 2682848 - 2682743
Alignment:
Q  458 cgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagaggg 557  Q
    |||||| ||||||||||||||| || ||| | ||  | ||| |||||||||||| |||  | |||| || |||||| |||||||||||| ||||||||||    
T  2682848 cgcttgatgggcatgtaacgcccgaagctaacgaaagtgggaagtggtccggctgctgata-gcttttaagcaaaattgaatcacatcgaaatgagaggg 2682750  T
Q  558 atcctga 564  Q
    |||||||    
T  2682749 atcctga 2682743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 9423999 - 9423950
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| |||||||||||||||||||||| ||| || |||||||||||    
T  9423999 gaatcacaccggaatgagagggatcctgaggtcgtgcatgtatgggactg 9423950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 24629121 - 24629072
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||||||||    
T  24629121 gaatcacaccggaatgagagggttcctgaggccgtgtaggtatgggactg 24629072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 1645890 - 1645842
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||||||||    
T  1645890 gaatcacatcggaatgagaggaatcttgaggccgtgtaggtatgggact 1645842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 3169205 - 3169253
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||||||||    
T  3169205 gaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggact 3169253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 568
Target Start/End: Complemental strand, 4128030 - 4127998
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggcc 568  Q
    |||||||||||||||||||||||||||||||||    
T  4128030 gaatcacatcggaatgagagggatcctgaggcc 4127998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 580
Target Start/End: Complemental strand, 23942930 - 23942886
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgg 580  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||    
T  23942930 gaatcacatcggaatgagagggatcctggggccgtgtaggtatgg 23942886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 29628808 - 29628760
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||| |||||||||||||||||||||||  ||||||| ||||    
T  29628808 gaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgagact 29628760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 51331422 - 51331374
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||||||||    
T  51331422 gaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggact 51331374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 585
Target Start/End: Original strand, 17029323 - 17029378
Alignment:
Q  530 aaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||| ||||||||||||||||||||  |||| ||| || |||||||||||    
T  17029323 aaaactgaattacatcggaatgagagggatctagaggtcgtgcaagtatgggactg 17029378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 511
Target Start/End: Complemental strand, 20305960 - 20305913
Alignment:
Q  464 gtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggct 511  Q
    |||| |||||||||||||||| |||||| |||||| ||||||||||||    
T  20305960 gtggacatgtaacgcctgaggttgatgatggcgggaagtggtccggct 20305913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 535 - 570
Target Start/End: Original strand, 35477801 - 35477836
Alignment:
Q  535 tgaatcacatcggaatgagagggatcctgaggccgt 570  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35477801 tgaatcacatcggaatgagagagatcctgaggccgt 35477836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 536 - 579
Target Start/End: Complemental strand, 50399134 - 50399091
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatg 579  Q
    |||||||||||||||||||||||||||||| ||||  |||||||    
T  50399134 gaatcacatcggaatgagagggatcctgagaccgtgtaggtatg 50399091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 24629574 - 24629525
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||| |||  |||||||||||||    
T  24629574 gaatcacaccggaatgagagggttcctgaggtcgtgtaggtatgggactg 24629525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 506
Target Start/End: Original strand, 27029182 - 27029223
Alignment:
Q  465 tgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    |||||||||||| || |||||||| |||||||||||||||||    
T  27029182 tgggcatgtaacacccgaggctgacgagggcggggagtggtc 27029223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 52048813 - 52048764
Alignment:
Q  531 aaactgaat-cacatcggaatgagagggatcctgaggccgtacaggtatg 579  Q
    ||||||||| ||| |||||||||||||| |||| ||||||||||||||||    
T  52048813 aaactgaattcacgtcggaatgagagggttcctaaggccgtacaggtatg 52048764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 23943025 - 23942981
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  23943025 tggtgggcatgtaacacctaaggatgacgagggcggggagtggtc 23942981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 50398777 - 50398733
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  50398777 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 50398733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 3e-68; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 446 - 585
Target Start/End: Complemental strand, 11517625 - 11517486
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11517625 atgtaacgcctccgcttggtgggcatgtaacgcccgaggttgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 11517526  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11517525 ggaatgagagggatcctgaggccgtacaggtatgggactg 11517486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 9124869 - 9125007
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9124869 tgtaacgccttcgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 9124968  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||| |||| ||||||||| |||||||| |||||    
T  9124969 gaatgagagagatcttgaggccgtgcaggtatgagactg 9125007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 42515001 - 42515140
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  42515001 atgtaacgtctccgcttggtgggcatgtaacgcccgaggctgatgagggtggagagtggtccggctcctggcatgcttctaggcaaaattgaatcacatc 42515100  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  42515101 ggaatgagagggatcctgaggccgtgcaggtatgagactg 42515140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 13125372 - 13125234
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  13125372 tgtaacgcctccgcttggtgggcatgtaacgcccgaggcggatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcatatcg 13125273  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||| ||||||| | ||||||||||||||    
T  13125272 gaatgagagggatcttgaggccctgcaggtatgggactg 13125234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 18833196 - 18833334
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||| ||||||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18833196 tgtaacgcccccgcttggtgggcatgtaacgctcagggctgatgagggcggggagtggtccggttcctggcatgcttctaggcaaaactgaatcacatcg 18833295  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  18833296 gaatgagagggttcctgaggccgtacaggtatggaactg 18833334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 461 - 585
Target Start/End: Complemental strand, 13124923 - 13124799
Alignment:
Q  461 ttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatc 560  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  13124923 ttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcatattggaatgagagggatc 13124824  T
Q  561 ctgaggccgtacaggtatgggactg 585  Q
     ||||||||| ||||||||||||||    
T  13124823 ttgaggccgtgcaggtatgggactg 13124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 471 - 585
Target Start/End: Complemental strand, 2941969 - 2941855
Alignment:
Q  471 tgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgt 570  Q
    |||||||||  ||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2941969 tgtaacgcccaaggctgatgagggcgaggagtggcccggctcccgccatgcttctaggcaaaactgaatcacatcagaatgagagggatcctgaggccgt 2941870  T
Q  571 acaggtatgggactg 585  Q
    |||||||||||||||    
T  2941869 acaggtatgggactg 2941855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 5406823 - 5406686
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||| || |||||||||||||| || || ||||||| |||||||||||||||||||    
T  5406823 tgtaacgcctccgcttcgtgggcatgtaacgctcgaggctgatgagggtggagagtggtccggctcatgaca-gcttctaagcaaaactgaatcacatcg 5406725  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||| ||||||||| | | ||| | ||||||||||||    
T  5406724 gaatgatagggatcctaaagtcgtgccggtatgggactg 5406686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 471 - 565
Target Start/End: Original strand, 25182296 - 25182389
Alignment:
Q  471 tgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgag 565  Q
    ||||||||| |||| |||  | |||||||||||||| ||||||| ||| |||||||||||||   || ||||||||||||||||| |||||||||    
T  25182296 tgtaacgcccgaggatgacaaaggcggggagtggtcaggctcctagca-gcttctaggcaaagacgagtcacatcggaatgagagagatcctgag 25182389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 586
Target Start/End: Complemental strand, 31406786 - 31406681
Alignment:
Q  481 gaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaact-gaatcacatcggaatgagagggatcctgaggccgtacaggtatg 579  Q
    ||||||||||||||||||||||||| | |||| ||| | |||||||  ||||| | ||||||||||  ||||||||||||||||| ||||| ||| | ||    
T  31406786 gaggctgatgagggcggggagtggttcagctcttggaa-gcttctaaacaaaaatcgaatcacatcaaaatgagagggatcctgaagccgtgcagatctg 31406688  T
Q  580 ggactga 586  Q
    |||||||    
T  31406687 ggactga 31406681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 28495853 - 28495901
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  28495853 gaatcacatcggaatgagagggatcttgaggccgtgtaggtatgggact 28495901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 679812 - 679862
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatggga 582  Q
    |||||||||||||| |||||||||||||||||||| |||  ||||||||||    
T  679812 aactgaatcacatcagaatgagagggatcctgaggtcgtgtaggtatggga 679862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 518
Target Start/End: Original strand, 1628648 - 1628713
Alignment:
Q  453 gcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggca 518  Q
    ||||||||||||||| ||||||||||   ||||||||||| |||| || |||||||| ||||||||    
T  1628648 gcctccgcttggtggacatgtaacgctcaaggctgatgagagcggagaatggtccggatcctggca 1628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 2193255 - 2193304
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| ||||||| |||| ||||||||||||||    
T  2193255 gaatcacaccggaatgagagggttcctgagaccgtgcaggtatgggactg 2193304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 534 - 579
Target Start/End: Complemental strand, 6747747 - 6747702
Alignment:
Q  534 ctgaatcacatcggaatgagagggatcctgaggccgtacaggtatg 579  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||    
T  6747747 ctgaatcacattggaatgagagggatcctgaggccgtgtaggtatg 6747702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 6719221 - 6719173
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||||    
T  6719221 gaatcacattggaatgagagggatcctgaggctgtgtaggtatgggact 6719173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 28495755 - 28495707
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||| ||||||||||||||||||||||||| |||  ||||||||||||    
T  28495755 gaatcccatcggaatgagagggatcctgaggtcgtgtaggtatgggact 28495707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 42515543 - 42515591
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||| ||||||||||||||||||||||||  ||||||| ||||    
T  42515543 gaatcacatcagaatgagagggatcctgaggccgtgtaggtatgagact 42515591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 46425740 - 46425788
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||| || |  ||||||||||||    
T  46425740 gaatcacatcggaatgagagggatcctgagaccatgtaggtatgggact 46425788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 570
Target Start/End: Complemental strand, 29039172 - 29039133
Alignment:
Q  531 aaactgaatcacatcggaatgagagggatcctgaggccgt 570  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  29039172 aaaccgaatcacatcggaatgagaggcatcctgaggccgt 29039133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 532 - 566
Target Start/End: Complemental strand, 2611803 - 2611769
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgagg 566  Q
    |||||||||||||||||||||||||| ||||||||    
T  2611803 aactgaatcacatcggaatgagaggggtcctgagg 2611769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 506
Target Start/End: Complemental strand, 35474364 - 35474322
Alignment:
Q  464 gtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||    
T  35474364 gtgggcatgtaacacctaaggctgatgagtgcggggagtggtc 35474322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 2189143 - 2189192
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| ||||||||| || ||||| ||||||||    
T  2189143 gaatcacaccggaatgagagggttcctgaggctgtgcaggtgtgggactg 2189192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 579
Target Start/End: Original strand, 10430764 - 10430805
Alignment:
Q  538 atcacatcggaatgagagggatcctgaggccgtacaggtatg 579  Q
    |||||| ||||||||||||| |||||||||||| ||||||||    
T  10430764 atcacaccggaatgagagggttcctgaggccgtgcaggtatg 10430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 2189501 - 2189545
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  2189501 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 2189545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 3305459 - 3305411
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||| |||||| ||||||||||||||||  | ||||||||||    
T  3305459 gaatcacatcgaaatgagggggatcctgaggccgtgtaagtatgggact 3305411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 580
Target Start/End: Complemental strand, 26957704 - 26957660
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgg 580  Q
    ||||||||||||||||||||||||| |||||| ||  ||||||||    
T  26957704 gaatcacatcggaatgagagggatcttgaggctgtgtaggtatgg 26957660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 34405738 - 34405690
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||| |||||||||||||||||| ||||| |  ||||||||||||    
T  34405738 gaatcacaccggaatgagagggatcctaaggccttgtaggtatgggact 34405690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 34405836 - 34405792
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  34405836 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 34405792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 3e-65; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 30966144 - 30966282
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30966144 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggtggggagtggtccggctcctggcatgcttctaggcaaaactgaatcgcatcg 30966243  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30966244 gaatgagagggatcctgaggccgtacaggtatgggactg 30966282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 30966599 - 30966738
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30966599 atgtaacacctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcgcatc 30966698  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  30966699 ggaatgagagggatcctgaggccgtacatgtatgggactg 30966738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 24818235 - 24818374
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24818235 atgtaacgcctgcgcttggtgggcatgtaacgcccgaggctgatgagggtggggagtggtccggctcctggcatgcttctaggtaaaactgaatcacatc 24818334  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  24818335 ggaatgagagggatcctgaggccgtgcatgtatgggactg 24818374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 446 - 585
Target Start/End: Complemental strand, 29259857 - 29259718
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  29259857 atgtaacgcctccgcttggtgggcatgtaacgctcgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggtaagactgaatcacatc 29259758  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  29259757 ggaatgagagggatcctgagaccgtacaagtatgggactg 29259718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 447 - 582
Target Start/End: Complemental strand, 5400053 - 5399918
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5400053 tgtaacgcctccgcttggtgagcatgtaatgcctgaggctgatgagggcagggagtggtccggctcctggcatgcttctaggcaaaattgaatcacatcg 5399954  T
Q  547 gaatgagagggatcctgaggccgtacaggtatggga 582  Q
    |||||||||||||| ||||| ||| || ||||||||    
T  5399953 gaatgagagggatcttgaggtcgtgcaagtatggga 5399918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 1953066 - 1953203
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||| | |||||||||||||||||| | |  |||| ||||||||||  |||||||||||||| ||| || |||| | |||||||| ||||||||||    
T  1953066 atgtaacgtccccgcttggtgggcatgtagcactcgaggatgatgagggcaaggagtggtccggcttctgaca-gctttt-ggcaaaaccgaatcacatc 1953163  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||| | ||| |||||||| |||||    
T  1953164 ggaatgagagggatcctgaagtcgtgcaggtatgagactg 1953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 462 - 582
Target Start/End: Complemental strand, 30962111 - 30961992
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcc 561  Q
    |||||||||||||||||| |||||||   |||| |||||||||| | |||||||||| ||||||||| ||||  |||||||||| ||||||||| |||||    
T  30962111 tggtgggcatgtaacgcccgaggctgtcaagggtggggagtggttcagctcctggca-gcttctaggaaaaatcgaatcacatcagaatgagagagatcc 30962013  T
Q  562 tgaggccgtacaggtatggga 582  Q
    ||| |||||  ||||||||||    
T  30962012 tgaagccgtgtaggtatggga 30961992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 469 - 565
Target Start/End: Original strand, 82952 - 83045
Alignment:
Q  469 catgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgag 565  Q
    ||||||||||| || ||||| |||||||| |||||||| ||||||||||| ||||||||||  ||||||||||| ||| ||||||||||||||||||    
T  82952 catgtaacgcccgaagctgacgagggcggagagtggtctggctcctggca-gcttctaggc--aactgaatcacgtcgaaatgagagggatcctgag 83045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 33174957 - 33175005
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  33174957 gaatcacatcggaatgagagggatcctgaggccgtgtaggtatgggact 33175005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 585
Target Start/End: Complemental strand, 25338148 - 25338095
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||    
T  25338148 aactgaatcacaccggaatgagagggttcctgaggtcgtgcaggtatgggactg 25338095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 25434203 - 25434155
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||| |||||||||||||||||||||||||| | |||||||||||    
T  25434203 gaatcacaccggaatgagagggatcctgaggccgtgctggtatgggact 25434155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 29804681 - 29804729
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  29804681 gaatcacatcggaatgagagggatcctgaggccttgtaggtatgggact 29804729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 33174504 - 33174552
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  33174504 gaatcacatcggaatgagagggatcctgatgccgtgtaggtatgggact 33174552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 566
Target Start/End: Original strand, 1912520 - 1912554
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgagg 566  Q
    |||||||||||||||||||||||||||||||||||    
T  1912520 aactgaatcacatcggaatgagagggatcctgagg 1912554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 16379392 - 16379441
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||| || |||||||||||||||| |||||||| ||||||||||||||    
T  16379392 gaatcaaattggaatgagagggatcccgaggccgtgcaggtatgggactg 16379441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 30963500 - 30963463
Alignment:
Q  445 aatgtaacgcctccgcttggtgggcatgtaacgcctga 482  Q
    |||||||||||| |||||||||||||||||||||||||    
T  30963500 aatgtaacgcctacgcttggtgggcatgtaacgcctga 30963463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 585
Target Start/End: Original strand, 41754284 - 41754337
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| ||||||||||||| || ||||||||| |||||||| |||||    
T  41754284 aactgaatcacaccggaatgagagggttcttgaggccgtgcaggtatgagactg 41754337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 18099025 - 18098977
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||| |||||||||||||  ||||||| ||||    
T  18099025 gaatcacatcggaatgagaggaatcctgaggccgtgtaggtatgagact 18098977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 18448065 - 18448017
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| ||||    
T  18448065 gaatcacatcggaatgatagggatcctgaggccgtgtaggtatgtgact 18448017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 27883073 - 27883024
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| || ||||||||||||||||||||||| || ||||| |||||    
T  27883073 gaatcacaccgaaatgagagggatcctgaggccgtgcatgtatgagactg 27883024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 33174859 - 33174903
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  33174859 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 33174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 7e-63; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 34309175 - 34309037
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34309175 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcgaggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 34309076  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  34309075 gaatgagagggatcctgaggccgtacaagtatgagactg 34309037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 446 - 585
Target Start/End: Complemental strand, 34308716 - 34308577
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34308716 atgtaacgcctccgcttggtgggcatgtaacgcccgaggctgataagggcggggagtggtccggctcctggcgtgcttctaggcaaaactgaatcacatc 34308617  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||| |||||||||||||||||||| ||||| |||||    
T  34308616 ggaatgaaagggatcctgaggccgtacaagtatgagactg 34308577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 12100602 - 12100739
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  12100602 tgtaacgcctccgctcggtgtgcatgtaacacccgaggctgatgagggcggggagtggtccgactcctggcatgcttctaggaaaaactgaatcacatcg 12100701  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
     |||||||  ||||||||||||||||||||||| |||||    
T  12100702 aaatgaga-agatcctgaggccgtacaggtatgagactg 12100739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 446 - 562
Target Start/End: Original strand, 25147445 - 25147561
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25147445 atgtaacgcctccgcttggtgggcatgtaacactcgaggctgatgagggcggggagtggtccggctcttggcatgcttctaggcaaaactaaatcacatc 25147544  T
Q  546 ggaatgagagggatcct 562  Q
    |||||||||| ||||||    
T  25147545 ggaatgagagagatcct 25147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 21316345 - 21316207
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||| |||| ||||||||||||    
T  21316345 tgtaacacctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggcttctggcaagcatctaggaaaaattgaatcacatcg 21316246  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
      |||||||||||||| ||||||| |||||||| |||||    
T  21316245 cgatgagagggatcctaaggccgtgcaggtatgagactg 21316207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 447 - 582
Target Start/End: Original strand, 25144682 - 25144817
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||| || ||||||||| |||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  25144682 tgtaacacccccgcttggtaggcatgtaacgttcgaggctgatgagggcggggagtggtctggctcctggcatgcttctaggcaaaactgaatcacatca 25144781  T
Q  547 gaatgagagggatcctgaggccgtacaggtatggga 582  Q
    ||||||||| ||||  |||| ||| |||||||||||    
T  25144782 gaatgagagagatctcgaggtcgtgcaggtatggga 25144817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 462 - 585
Target Start/End: Original strand, 25147892 - 25148015
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcc 561  Q
    |||||||||||||||||  |||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  25147892 tggtgggcatgtaacgctcgagtatgatgagggcggggagtggtttggctcctggcatgcttctaggcaaaactgaatcacataagaatgagagggatcc 25147991  T
Q  562 tgaggccgtacaggtatgggactg 585  Q
     |||| |||  |||||||||||||    
T  25147992 cgaggtcgtgtaggtatgggactg 25148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 22705090 - 22705220
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||| |||       |    
T  22705090 tgtaacgcctccgctcggtgggcatgtaacgctcgaggctgatgaggacggggagtggtcaggctcctggca-gcttcaaggcaaaaccgaa-------g 22705181  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||||| |||||  |||||||||||||    
T  22705182 gaatgagagggatcctgaagccgtgtaggtatgggactg 22705220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 31283433 - 31283356
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgctt 523  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||||||    
T  31283433 atgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggtggagagtggtccggctcctagcatgctt 31283356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 447 - 560
Target Start/End: Complemental strand, 27819481 - 27819369
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||| ||  |||| |||||||||  || ||||||||| ||||||| | |||| |||||||||| ||||||||||     
T  27819481 tgtaacgcctccgcttggtgggcatgtaaggctcgaggttgatgagggtaggaagtggtccgactcctgg-aagcttttaggcaaaaccgaatcacatca 27819383  T
Q  547 gaatgagagggatc 560  Q
    ||||||||||||||    
T  27819382 gaatgagagggatc 27819369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 585
Target Start/End: Original strand, 9250911 - 9251049
Alignment:
Q  445 aatgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 544  Q
    |||||||| ||||||||||||||  ||||||||   ||||||||||| |||| ||||||||| | ||||| |||  ||| |||||||||| |||||||||    
T  9250911 aatgtaacacctccgcttggtggatatgtaacgttcgaggctgatgaaggcgaggagtggtctgcctcctagcaa-cttttaggcaaaaccgaatcacat 9251009  T
Q  545 cggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    | |||||||||||||||||| ||| || |||||||||||||    
T  9251010 cagaatgagagggatcctgaagcc-tagaggtatgggactg 9251049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 532 - 584
Target Start/End: Complemental strand, 8080493 - 8080441
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  8080493 aactgaatcacatcggaatgagagggatcctgaagccgtgtaggtatgggact 8080441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 10844882 - 10844931
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  10844882 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 10844931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 27925898 - 27925947
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  27925898 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 27925947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 17103086 - 17103129
Alignment:
Q  542 catcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  17103086 catcggaatgagagagatcctgaggccgtacaggtatgagactg 17103129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 22026378 - 22026427
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| || ||||||||| ||||||||||||||    
T  22026378 gaatcacaccggaatgagagggttcgtgaggccgtgcaggtatgggactg 22026427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 32292396 - 32292445
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| || |||||||||||    
T  32292396 gaatcacaccggaatgagagggttcctgaggccgtgcaagtatgggactg 32292445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 2044057 - 2044105
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||| ||  ||||||| ||||    
T  2044057 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagact 2044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 27022485 - 27022437
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  27022485 gaatcacatcggaatgagagggatcttgaggccatgtaggtatgggact 27022437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 567
Target Start/End: Complemental strand, 22840680 - 22840645
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggc 567  Q
    |||||||||||||||||||||||| |||||||||||    
T  22840680 aactgaatcacatcggaatgagagagatcctgaggc 22840645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 533 - 584
Target Start/End: Original strand, 28453334 - 28453385
Alignment:
Q  533 actgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||| ||||||||||||||||| |||| ||| |||||||| ||||    
T  28453334 actgaatcacaccggaatgagagggatcccgaggtcgtgcaggtatgagact 28453385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 585
Target Start/End: Complemental strand, 10844758 - 10844713
Alignment:
Q  540 cacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||    
T  10844758 cacaccggaatgagagggttcctgaggccttgcaggtatgggactg 10844713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 585
Target Start/End: Complemental strand, 28375189 - 28375152
Alignment:
Q  548 aatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactg 28375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 585
Target Start/End: Complemental strand, 33852409 - 33852356
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| | ||||||||||||||| ||| |||| |||||||| |||||    
T  33852409 aactgaatcacaccagaatgagagggatcccgagaccgtgcaggtatgagactg 33852356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 41659252 - 41659203
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||| | ||| ||||||||||||||    
T  41659252 gaatcacaccggaatgagagggttcctgatgtcgtgcaggtatgggactg 41659203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 10844784 - 10844828
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  10844784 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 10844828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 12827401 - 12827353
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||  |||||||||||||||||||||||| |  ||||||||||||    
T  12827401 gaatcacgccggaatgagagggatcctgaggccttgtaggtatgggact 12827353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 585
Target Start/End: Complemental strand, 22548695 - 22548647
Alignment:
Q  537 aatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||| ||||||||||||| ||||||||| || |||||||| |||||    
T  22548695 aatcacaccggaatgagagggttcctgaggctgtgcaggtatgtgactg 22548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 7e-63; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 3887293 - 3887155
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3887293 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccagctcctggcatgcttttaggcaaaactgaatcacatcg 3887194  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  3887193 gaatgagagtgatcctgaggccgtacaggtatgggactg 3887155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 22556446 - 22556584
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22556446 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctaatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 22556545  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  22556546 gaatgagagggttcctgaggccgtgcaggtatgggactg 22556584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 2474314 - 2474453
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  2474314 atgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccgactcctggcatgcttctaggaaaaactgaatcacatc 2474413  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||| |||||| ||| ||||||| ||||||||||    
T  2474414 ggaatgagagagatcctaaggtcgtacagatatgggactg 2474453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 446 - 585
Target Start/End: Complemental strand, 3886838 - 3886699
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||    
T  3886838 atgtaacacctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggaatggtccggctcctagcatgcttctaggaaaaattgaatcacatc 3886739  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  3886738 ggaatgagagggatcctgaggtcgtacaagtatgggactg 3886699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 462 - 585
Target Start/End: Original strand, 22556894 - 22557017
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcc 561  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||     
T  22556894 tggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttcttggcaaaactgaatcacatcggaatgagagagttca 22556993  T
Q  562 tgaggccgtacaggtatgggactg 585  Q
    ||||||||| ||||||||||||||    
T  22556994 tgaggccgtgcaggtatgggactg 22557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 2473869 - 2474007
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  2473869 tgtaacacctccgcttggtgggcatgtaacgcccgaagctgatgagggcggggagtggtccgactcctggcatgcttttaggaaaaactgaatcacatcg 2473968  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||| ||| |||||||| ||| |||||    
T  2473969 gaatgagagggatcctaaggtcgtacaggcatgagactg 2474007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 469 - 585
Target Start/End: Complemental strand, 22975224 - 22975108
Alignment:
Q  469 catgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggcc 568  Q
    ||||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22975224 catgtaacgcccgaggctgatgagggcgaggagtggtccagctcttggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggcc 22975125  T
Q  569 gtacaggtatgggactg 585  Q
    || |||||||| |||||    
T  22975124 gtgcaggtatgtgactg 22975108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 448 - 585
Target Start/End: Original strand, 1821817 - 1821954
Alignment:
Q  448 gtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcgg 547  Q
    |||| ||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||  ||||| |||||||    
T  1821817 gtaatgcctctgcttggtgggcatgtaacgtctgaggctgacgagggtggggagtggtccggctcatggcatgcttctaggcaaagttgaattacatcgg 1821916  T
Q  548 aatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| |||| | ||| ||| |||||||| |||||    
T  1821917 aatgagagagatcttaaggtcgtgcaggtatgagactg 1821954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 188990 - 189116
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||| |||| ||||||||||            |||||||||||||||||||||||||    
T  188990 tgtaacgcctccgcttggtgggcatataacacccgaggctgatgaggacgggaagtggtccgg------------ttctaggcaaaactgaatcacatcg 189077  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  189078 gaatgagagggatcctgaggccgtacatgtatgggactg 189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 445 - 566
Target Start/End: Complemental strand, 30684794 - 30684673
Alignment:
Q  445 aatgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 544  Q
    ||||||| ||||| ||||||||| ||||||||| | ||| ||||  ||||| || ||||||||| |||||||||||||| ||||||||||  ||||||||    
T  30684794 aatgtaatgcctctgcttggtggtcatgtaacgtccgagactgacaagggcaggtagtggtccgactcctggcatgcttataggcaaaaccaaatcacat 30684695  T
Q  545 cggaatgagagggatcctgagg 566  Q
    ||||||||| ||||||||||||    
T  30684694 cggaatgagggggatcctgagg 30684673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 445 - 583
Target Start/End: Complemental strand, 30720043 - 30719905
Alignment:
Q  445 aatgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacat 544  Q
    |||||||||||||| |||||||||||||||||| | ||| ||||  |||||  | ||||||||| |||||| || |||| | |||||||| |||||||||    
T  30720043 aatgtaacgcctccacttggtgggcatgtaacgtccgagactgacaagggcatgtagtggtccgactcctgacacgcttattggcaaaaccgaatcacat 30719944  T
Q  545 cggaatgagagggatcctgaggccgtacaggtatgggac 583  Q
    | ||||||||||||||||||||  || || |||||||||    
T  30719943 cagaatgagagggatcctgaggttgtgcaagtatgggac 30719905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 535 - 585
Target Start/End: Complemental strand, 8642182 - 8642132
Alignment:
Q  535 tgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  8642182 tgaatcacatcagaatgagagggatcctaaggccgtgcaggtatgggactg 8642132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 34867789 - 34867838
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  34867789 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 34867838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 532 - 584
Target Start/End: Original strand, 39146934 - 39146986
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||| ||||||||||||| |||||||||  ||||||||||||    
T  39146934 aactgaatcacatcgaaatgagagggatcatgaggccgtgtaggtatgggact 39146986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 531 - 584
Target Start/End: Complemental strand, 20039626 - 20039573
Alignment:
Q  531 aaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||| ||||||||||||||||||||||||| |||||||||  |||||| |||||    
T  20039626 aaaccgaatcacatcggaatgagagggatcatgaggccgtgtaggtataggact 20039573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 10927093 - 10927045
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||| |||||||||||||||||||| |||  ||||||||||||    
T  10927093 gaatcacatcagaatgagagggatcctgaggtcgtgtaggtatgggact 10927045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 10927550 - 10927502
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||| |||||||||  ||||||| ||||    
T  10927550 gaatcacatcggaatgagagggatcttgaggccgtgtaggtatgagact 10927502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 17445602 - 17445554
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  17445602 gaatcacatcgaaatgagagggatcctgaggccgtgtaggcatgggact 17445554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 564
Target Start/End: Complemental strand, 2058853 - 2058775
Alignment:
Q  486 tgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaa-ctgaatcacatcggaatgagagggatcctga 564  Q
    |||||||||| | ||||||| || |||||| ||| ||||||||||||| | ||||||||||||| |||||| ||||||||    
T  2058853 tgatgagggcagagagtggttcgactcctgtcat-cttctaggcaaaaaccgaatcacatcggattgagagagatcctga 2058775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 570
Target Start/End: Complemental strand, 8391473 - 8391434
Alignment:
Q  531 aaactgaatcacatcggaatgagagggatcctgaggccgt 570  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  8391473 aaaccgaatcacatcggaatgagagggattctgaggccgt 8391434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 536 - 570
Target Start/End: Complemental strand, 42788793 - 42788759
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgt 570  Q
    |||||||| ||||||||||||||||||||||||||    
T  42788793 gaatcacaacggaatgagagggatcctgaggccgt 42788759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 21886293 - 21886244
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| ||||||||  || ||||||||||||||    
T  21886293 gaatcacaccggaatgagagggttcctgaggttgtgcaggtatgggactg 21886244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 581
Target Start/End: Complemental strand, 27646982 - 27646937
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatggg 581  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||    
T  27646982 gaatcacatcggaatgagagggatcctagggccgtgtaggtatggg 27646937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 29582173 - 29582113
Alignment:
Q  187 atatgcatgaatatttttagaagaatatacatttagatttagattttaaatatatttaagat 248  Q
    |||||| | ||||||||||||||| |||| ||||||||| | | ||||||||||||||||||    
T  29582173 atatgcttaaatatttttagaagattataaatttagattca-aatttaaatatatttaagat 29582113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 34371611 - 34371660
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||  ||||||||||||| ||||||||    
T  34371611 gaatcacaccggaatgagagggttcccaaggccgtacaggtgtgggactg 34371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 15513160 - 15513112
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||| | |||| ||  ||||||||||||    
T  15513160 gaatcacatcggaatgagagggatcattaggctgtgtaggtatgggact 15513112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 21886391 - 21886347
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  |||||||||||||||| ||||||||    
T  21886391 tggtgggcatgtaacaccgaaggctgatgagggcggagagtggtc 21886347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 29612055 - 29612118
Alignment:
Q  196 aatatttttagaagaatatacatttagatttagattttaaatatatttaagataagatatcatta 260  Q
    ||||| ||||||||| | || ||||||||| | |||| |||||||||||||||||||||| ||||    
T  29612055 aatatctttagaagattctaaatttagattgaaattt-aaatatatttaagataagatattatta 29612118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 34371969 - 34372013
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  34371969 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 34372013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 447 - 584
Target Start/End: Complemental strand, 142510 - 142373
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  142510 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgaggacggggagtggtccggctcctggcatgcttctaggaaaaactgaatcacatcg 142411  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||| |||||||||||||    
T  142410 gaatgagagggatcctgaggccgtgcaggtatgggact 142373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 446 - 585
Target Start/End: Complemental strand, 107700 - 107561
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  107700 atgtaacgcctccgcttggtgggcatgtaacacccgaggctgatgaggacggggagtggtccggttcctggcatgcttctaggaaaaactgaatcacatc 107601  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  107600 ggaatgagagggattctgaggccgtacaggtatgggactg 107561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 10209 - 10348
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10209 atgtaacgcctgcgcttggtgggcatgtaacgcccgaggctgatgagggtggggagtggtccggctcctggcatgcttctaggtaaaactgaatcacatc 10308  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  10309 ggaatgagagggatcctgaggccgtgcatgtatgggactg 10348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 13492698 - 13492837
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13492698 atgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcatatc 13492797  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||| |||||||||||| || |||||||| |||||    
T  13492798 ggaatgagaaggatcctgaggctgtgcaggtatgagactg 13492837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 459 - 585
Target Start/End: Complemental strand, 17731337 - 17731211
Alignment:
Q  459 gcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagaggga 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  17731337 gcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctagcatgcttctaggcaaaattgaatcacatcggaatgagaggga 17731238  T
Q  559 tcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| ||||||||||||||    
T  17731237 tcctgaggccgttcaggtatgggactg 17731211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 447 - 584
Target Start/End: Original strand, 16519879 - 16520015
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  16519879 tgtaacgcctccacttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggca-gcttctaggcaaaacagaatcacatcg 16519977  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||| ||  ||||||| ||||    
T  16519978 gaatgagagggatcctgaggctgtgtaggtatgagact 16520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 462 - 585
Target Start/End: Original strand, 7912235 - 7912358
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcc 561  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  7912235 tggtgggcatgtaacgcccgacgcagatgagggcggggagtggtccggctcctggcatgcttctaggaaaaactgaatcacatcggaatgagagggatct 7912334  T
Q  562 tgaggccgtacaggtatgggactg 585  Q
     |||||||| ||||||||||||||    
T  7912335 cgaggccgtgcaggtatgggactg 7912358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 447 - 584
Target Start/End: Original strand, 9351973 - 9352109
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  9351973 tgtaacgcctccgcttggtgggcatgtaacacccgaggctgatgagggcggggagtggtccggctcctggca-gcttctaggcaaaacataatcacatcg 9352071  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggact 584  Q
     |||||||||||||||||||| ||  ||||||| ||||    
T  9352072 aaatgagagggatcctgaggctgtgtaggtatgagact 9352109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 447 - 562
Target Start/End: Complemental strand, 13191749 - 13191634
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||| ||| |||||| ||||||||||    
T  13191749 tgtaatgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggcgagtagtccggctcttggtatgcttcgaggaaaaactaaatcacatcg 13191650  T
Q  547 gaatgagagggatcct 562  Q
    ||||||||||||||||    
T  13191649 gaatgagagggatcct 13191634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 471 - 585
Target Start/End: Original strand, 7911812 - 7911926
Alignment:
Q  471 tgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgt 570  Q
    |||||| || |||||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  7911812 tgtaacacccgaggctgatgagagcggggagtggtccgactcctggcatgtttctaggaaaaactgaatcacatcggaatgagagggatctcgaggccgt 7911911  T
Q  571 acaggtatgggactg 585  Q
     ||||||| ||||||    
T  7911912 gcaggtataggactg 7911926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 471 - 585
Target Start/End: Original strand, 13490055 - 13490169
Alignment:
Q  471 tgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgt 570  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |||||||| |||| |||||| ||    
T  13490055 tgtaacgcccgaggctgatgaaggcggggagtggtccggctcctgacatgcttctaggaaaaacttaatcacatcgaaatgagagagatcatgaggctgt 13490154  T
Q  571 acaggtatgggactg 585  Q
     ||||||| ||||||    
T  13490155 gcaggtataggactg 13490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 584
Target Start/End: Complemental strand, 9440620 - 9440527
Alignment:
Q  490 gagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  9440620 gagggtggggagtggtccggctctttgca-gcttctagggaaaactgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgggact 9440527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 585
Target Start/End: Complemental strand, 17027685 - 17027629
Alignment:
Q  529 caaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  17027685 caaaactaaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactg 17027629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 585
Target Start/End: Complemental strand, 9440485 - 9440407
Alignment:
Q  506 ccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||| ||||| ||||||||| || || ||||||||||||||||||||||||||||| | ||| ||||||||| ||||    
T  9440485 ccggctcttggca-gcttctagggaagaccgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactg 9440407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 545
Target Start/End: Complemental strand, 9441037 - 9440993
Alignment:
Q  500 agtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  9441037 agtggtccggctcctggca-gcttctaggcaaaactgaatcacatc 9440993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 21311514 - 21311563
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||    
T  21311514 gaatcacatcggaatgagagggttcatgaggccgtacaagtatgggactg 21311563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 3652485 - 3652533
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  3652485 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgggact 3652533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 23986464 - 23986416
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  23986464 gaatcacatcggaatgagagggatccggaggccgtgtaggtatgggact 23986416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 539 - 585
Target Start/End: Original strand, 3652981 - 3653027
Alignment:
Q  539 tcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||    
T  3652981 tcacatcggaatgagagggatcctgaggctgtgtaggtatgggactg 3653027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 17850917 - 17850966
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| |||||||||||||||||||||| ||| || |||||||||||    
T  17850917 gaatcacaccggaatgagagggatcctgaggtcgtgcaagtatgggactg 17850966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 17851373 - 17851422
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||||||| |||||||| || |||||||||||    
T  17851373 gaatcacaccggaatgagagggatcccgaggccgtgcaagtatgggactg 17851422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 20850320 - 20850369
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| || ||||||||| ||||||||||||||    
T  20850320 gaatcacaccggaatgagagggttcatgaggccgtgcaggtatgggactg 20850369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 6331059 - 6331011
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  6331059 gaatcacatcggaatgagatggatcctgaggccgtgtaggtatgagact 6331011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 20896835 - 20896787
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||||    
T  20896835 gaatcacatcggaatgagagggatccttaggccgtgtaggtatgagact 20896787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 534 - 584
Target Start/End: Complemental strand, 20126331 - 20126281
Alignment:
Q  534 ctgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||||||| |||| ||  ||||||| ||||    
T  20126331 ctgaatcacatcggaatgagagggatcctaaggctgtgtaggtatgagact 20126281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 2681363 - 2681314
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| ||||||||||||  |||| ||||||||    
T  2681363 gaatcacaccggaatgagagggttcctgaggccgtgtaggtttgggactg 2681314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 585
Target Start/End: Original strand, 27334156 - 27334209
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| ||||| ||||||| |||||||| ||| ||||||||| ||||    
T  27334156 aactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtatggaactg 27334209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 585
Target Start/End: Original strand, 27394896 - 27394949
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| ||||| ||||||| |||||||| ||| ||||||||| ||||    
T  27394896 aactgaatcacaccggaacgagagggttcctgaggtcgtgcaggtatggaactg 27394949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 31821844 - 31821807
Alignment:
Q  531 aaactgaatcacatcggaatgagagggatcctgaggcc 568  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  31821844 aaaccgaatcacatcggaatgagagggatcatgaggcc 31821807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 584
Target Start/End: Original strand, 23776436 - 23776488
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||  |||||||||||| ||||||||||| |  ||||||||||||    
T  23776436 aactgaatcacgccggaatgagaggtatcctgaggccttgtaggtatgggact 23776488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 105629 - 105768
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  105629 atgtaacgcctccgcttggtgggcatgtaacacccaaggctgatgagggcggggagtggtctggttcctggcatgcttctaggcaaaactaaatcacatc 105728  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  105729 ggaatgagagggatcctgaggccgtacaggtatggaactg 105768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 1e-55; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 12820554 - 12820692
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12820554 tgtaacgctcccgcttggtgggcatgtaacgctcgaggctgatgagggcggggagtggtccggctccttgcatgcttctaggcaaaactgaatcacatcg 12820653  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  12820654 gaatgagagggattctaaggccgtacaggtatgggactg 12820692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 31284512 - 31284374
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31284512 tgtaacgcctccgcttagtgggcatgtatcgcccgaggctgatgagggcggggagtggtccgactcctggcatgcttctaggcaaaactgaatcacatcg 31284413  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||| ||||| ||| ||||||||||||||    
T  31284412 gaatgagagggatcttgaggtcgtgcaggtatgggactg 31284374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 32388967 - 32388848
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32388967 tgtaacgcctccgcttagtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaattgaatcacatcg 32388868  T
Q  547 gaatgagagggatcctgagg 566  Q
    ||||||||||||||||||||    
T  32388867 gaatgagagggatcctgagg 32388848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 41473906 - 41474045
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  41473906 atgtaacgcctccgcttgatgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctagcatgcttctcggcaagactgaatcacatc 41474005  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    | ||||||||||||| ||||| ||| |||||||| |||||    
T  41474006 gaaatgagagggatcttgaggtcgttcaggtatgtgactg 41474045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 450 - 585
Target Start/End: Original strand, 41472214 - 41472349
Alignment:
Q  450 aacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaa 549  Q
    |||||||| | |||||||||||||||||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41472214 aacgcctctgattggtgggcatgtaacgcccaaggctgaagagggtggtgagtggtccggctcctggcatgcatctaggcaagactgaatcacatcggaa 41472313  T
Q  550 tgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||| |||||||||||| |||||    
T  41472314 tgagagggatcctgaggtcgtacaggtatgagactg 41472349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 25248021 - 25248159
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    ||||||||||||||||| ||||   |||||||| |||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  25248021 tgtaacgcctccgcttgatgggttagtaacgcccgaggctaatgagggtggggagtggtcaggctcctggcatgcttataggcaaaactgaatcacatcg 25248120  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||| || ||||||| ||||||||||||||    
T  25248121 gaatgagagggattctaaggccgtgcaggtatgggactg 25248159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 8067216 - 8067325
Alignment:
Q  473 taacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtac 572  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||| |    
T  8067216 taacgcccgaggctgatgagggcggggagtggtccggctcctggcatgcttctaagcaaaattgaatcacatcggaatgagagggaccctgaggccgtgc 8067315  T
Q  573 aggtatggga 582  Q
    ||||||||||    
T  8067316 aggtatggga 8067325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 7477102 - 7477239
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||| ||||||||||| |||||| ||  ||||||||||||| |||||||||||||| ||||||||| | |||||||||||||  ||||||||||    
T  7477102 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccgactcctggca-gtttctaggcaaaacataatcacatcg 7477200  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||| | | ||| |||||||| |||||    
T  7477201 gaatgagagggatcctaaagtcgtgcaggtatgagactg 7477239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 471 - 585
Target Start/End: Complemental strand, 27187542 - 27187428
Alignment:
Q  471 tgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgt 570  Q
    ||||||||| |||||||||||||||||  ||||||||||||||| ||| ||||||||| |||| |||||||||| |||||||||||||||||||||| ||    
T  27187542 tgtaacgcccgaggctgatgagggcggcaagtggtccggctcctagcaagcttctaggaaaaattgaatcacattggaatgagagggatcctgaggctgt 27187443  T
Q  571 acaggtatgggactg 585  Q
     || |||||||||||    
T  27187442 gcatgtatgggactg 27187428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 585
Target Start/End: Original strand, 7493792 - 7493929
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||| ||||||||||| |||||| ||  ||||||||||||| ||||||||||||||||| |||||  |||||||||||||||  ||||||||||    
T  7493792 tgtaacgccttcgcttggtgggtatgtaatgctcgaggctgatgaggacggggagtggtccggcttctggc-ggcttctaggcaaaacataatcacatcg 7493890  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||| |||||| | | ||| |||||||| |||||    
T  7493891 gaatgagagagatcctaaagtcgtgcaggtatgagactg 7493929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 532 - 585
Target Start/End: Original strand, 28561741 - 28561794
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  28561741 aactgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 28561794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 532 - 585
Target Start/End: Original strand, 39653159 - 39653212
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  39653159 aactgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 39653212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 16811380 - 16811428
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||    
T  16811380 gaatcacatcggaatgagagggatcctgaggccgtgtaggtttgggact 16811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 532 - 584
Target Start/End: Original strand, 30529682 - 30529734
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| ||||    
T  30529682 aactgaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagact 30529734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 16810924 - 16810973
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||    
T  16810924 gaatcacatcggaatgagagggatcttgaggccgtgtagatatgggactg 16810973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 37045034 - 37045082
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||| ||||||||||||||||||||||||  |||| |||||||    
T  37045034 gaatcacatctgaatgagagggatcctgaggccgtgtaggtgtgggact 37045082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 536 - 583
Target Start/End: Original strand, 2911094 - 2911141
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggac 583  Q
    |||||||| | ||||||||||||||| |||||||| ||||||||||||    
T  2911094 gaatcacacctgaatgagagggatcccgaggccgtgcaggtatgggac 2911141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 25230394 - 25230347
Alignment:
Q  537 aatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||| |||||||||||||||| |||  ||||||||||||    
T  25230394 aatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggact 25230347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 25237981 - 25237934
Alignment:
Q  537 aatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||| |||||||||||||||| |||  ||||||||||||    
T  25237981 aatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggact 25237934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Complemental strand, 13150343 - 13150302
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtg 503  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  13150343 tggtgggcatgtaacacccaaggctgatgagggcggggagtg 13150302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 14813948 - 14813997
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||| |||||    
T  14813948 gaatcacaccggaatgagagggttcctgaggccgtgtaggtatgagactg 14813997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 25238916 - 25238872
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  25238916 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 25238872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 505
Target Start/End: Complemental strand, 33466946 - 33466910
Alignment:
Q  469 catgtaacgcctgaggctgatgagggcggggagtggt 505  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  33466946 catgtaatgcccgaggctgatgagggcggggagtggt 33466910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 39640936 - 39640984
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||| ||||||||| ||||||||||||||  ||||||| ||||    
T  39640936 gaatcacatcagaatgagagagatcctgaggccgtgtaggtatgagact 39640984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 446 - 585
Target Start/End: Complemental strand, 35759845 - 35759706
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||||||    
T  35759845 atgtaacgcctccacttggtgggtatgtaacgcccgaggctgatgacggcggggagtggtctggctcctagcatgcttctaggaaaaattgaatcacatc 35759746  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  35759745 ggaatgagagggatcctgaggccgtgcaggtatgggactg 35759706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 449 - 585
Target Start/End: Complemental strand, 35761148 - 35761012
Alignment:
Q  449 taacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcgga 548  Q
    |||||||||||||||||||| |||||||| | |||||||||||||| || |||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  35761148 taacgcctccgcttggtgggtatgtaacgtccgaggctgatgagggtggcgagtggtctggctcctggcatgcttctaggaaaaattgaatcacatcgga 35761049  T
Q  549 atgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||||||||| |||||||| |||||    
T  35761048 atgagagggatcctgaggccgtgcaggtatgagactg 35761012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 446 - 585
Target Start/End: Original strand, 2328224 - 2328363
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||     
T  2328224 atgtaacgcctccgcttggtgggcatgtaacacccaaggctgatgagggcggagagtggtctggctcctggcatgcttttaggcaaaactgaatcacatt 2328323  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||  ||  ||||||||||||||||||||||||    
T  2328324 ggaatgagagaaattatgaggccgtacaggtatgggactg 2328363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 461 - 585
Target Start/End: Complemental strand, 20061413 - 20061289
Alignment:
Q  461 ttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatc 560  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||||| ||||||||||||||    
T  20061413 ttggtgggcatgtaacgcccgaggctgatgagggcggggagtggtccggctcttggcaatcttctaggctaaactgaatcacatcagaatgagagggatc 20061314  T
Q  561 ctgaggccgtacaggtatgggactg 585  Q
    |||||| ||| ||||||||||||||    
T  20061313 ctgaggtcgtgcaggtatgggactg 20061289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 470 - 585
Target Start/End: Complemental strand, 46693950 - 46693834
Alignment:
Q  470 atgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaa-ctgaatcacatcggaatgagagggatcctgaggcc 568  Q
    ||||||| || |||||||||||||||  ||||||||||| ||| || |||||||||||||||||  |||||||||||||||||||||||||||| ||| |    
T  46693950 atgtaacacccgaggctgatgagggctaggagtggtccgactcttgtcatgcttctaggcaaaagttgaatcacatcggaatgagagggatcctaaggtc 46693851  T
Q  569 gtacaggtatgggactg 585  Q
    || || |||||||||||    
T  46693850 gtgcatgtatgggactg 46693834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 455 - 584
Target Start/End: Original strand, 23180649 - 23180777
Alignment:
Q  455 ctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgaga 554  Q
    ||||||||||||||||||||||||  | ||||||||| |||||||||||||||| ||||| | | |||| |||| |||| |||||||||| |||||||||    
T  23180649 ctccgcttggtgggcatgtaacgctcgtggctgatgaaggcggggagtggtccgactcctagta-gcttataggaaaaattgaatcacattggaatgaga 23180747  T
Q  555 gggatcctgaggccgtacaggtatgggact 584  Q
    |||||| ||| |||||  ||| ||||||||    
T  23180748 gggatcttgaagccgtgtaggaatgggact 23180777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20054227 - 20054178
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  20054227 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 20054178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20054683 - 20054634
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  20054683 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 20054634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20055139 - 20055090
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  20055139 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 20055090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20055595 - 20055546
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  20055595 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 20055546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20056051 - 20056002
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  20056051 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 20056002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20056507 - 20056458
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  20056507 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 20056458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20057410 - 20057361
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  20057410 gaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactg 20057361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 585
Target Start/End: Complemental strand, 20057870 - 20057817
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| || |||||||||| |||||||||||| ||||||||||||||    
T  20057870 aactgaatcacaccgaaatgagagggttcctgaggccgtgcaggtatgggactg 20057817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 50003222 - 50003173
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  50003222 gaatcacatcggaatgagagggatcctgaggccatgcaggtataggactg 50003173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 521 - 585
Target Start/End: Original strand, 2634909 - 2634972
Alignment:
Q  521 cttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||  || ||||||||||||||    
T  2634909 cttctaggcaaatc-gaatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactg 2634972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 43057670 - 43057622
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  43057670 gaatcacatcggaatgagagggatcctgaggccgtgtaggtatgagact 43057622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 30873097 - 30873048
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  30873097 gaatcacaccggaatgagagggattctgaggccgtgcaggtatgagactg 30873048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 38340905 - 38340954
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| |||||||||| || |||||||||||| ||||||||||||||    
T  38340905 gaatcacaccggaatgagatggttcctgaggccgtgcaggtatgggactg 38340954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 50002854 - 50002805
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||||||||| ||||||||||||||  ||| |||||||||    
T  50002854 gaatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactg 50002805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 568
Target Start/End: Complemental strand, 16452080 - 16452048
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggcc 568  Q
    |||||||||||||||||||||||||||||||||    
T  16452080 gaatcacatcggaatgagagggatcctgaggcc 16452048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 568
Target Start/End: Complemental strand, 16461233 - 16461201
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggcc 568  Q
    |||||||||||||||||||||||||||||||||    
T  16461233 gaatcacatcggaatgagagggatcctgaggcc 16461201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 50002432 - 50002384
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||| |||||||||  ||| ||||||||    
T  50002432 gaatcacatcggaatgagagggatcatgaggccgtgtaggcatgggact 50002384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 584
Target Start/End: Original strand, 7548085 - 7548138
Alignment:
Q  531 aaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||| | ||||||||||||| |||||||||  ||||||| ||||    
T  7548085 aaactgaatcacattgcaatgagagggatcatgaggccgtgtaggtatgagact 7548138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 12883523 - 12883572
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| |||||||||| |||||| ||||| || ||||||||||||||    
T  12883523 gaatcacaccggaatgagatggatcccgaggctgtgcaggtatgggactg 12883572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Complemental strand, 20845808 - 20845759
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| |||||||||| || |||||||||||| |||||||| |||||    
T  20845808 gaatcacaccggaatgagacggttcctgaggccgtgcaggtatgagactg 20845759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20054325 - 20054281
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20054325 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20054281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20054781 - 20054737
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20054781 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20054737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20055237 - 20055193
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20055237 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20055193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20055693 - 20055649
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20055693 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20055649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20056149 - 20056105
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20056149 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20056105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20056605 - 20056561
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20056605 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20056561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20057052 - 20057008
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20057052 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20057008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 20057508 - 20057464
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  20057508 tggtgggcatgtaacacccaaggctgacgagggcggggagtggtc 20057464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 52250205 - 52250253
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||| |||||||||||||||| ||||||| |  ||||||||||||    
T  52250205 gaatcacaccggaatgagagggatcatgaggccttgtaggtatgggact 52250253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 103; Significance: 6e-51; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 447 - 585
Target Start/End: Complemental strand, 162914 - 162776
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcg 546  Q
    |||||||||||| |||||||| ||||||| ||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  162914 tgtaacgcctcctcttggtggacatgtaatgcccgaggctgatgagggtggggagtggtctggctcctgacatgcttctaggcaaaactgaattacatcg 162815  T
Q  547 gaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  162814 gaatgagagggatcctgaggccgtacaggtatgtgactg 162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 446 - 584
Target Start/End: Complemental strand, 2447 - 2309
Alignment:
Q  446 atgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatc 545  Q
    |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| ||||||||||||||||    
T  2447 atgtaatgcctccgcttggtgggtatgtaacgcccgaggctgatgagggcggggagtggtccagcttctagcatgcttctaggaaaaactgaatcacatc 2348  T
Q  546 ggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||| ||||||| ||||||| |||||||||||||    
T  2347 ggaatgagaaggatcctaaggccgtgcaggtatgggact 2309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 447 - 499
Target Start/End: Complemental strand, 2606 - 2554
Alignment:
Q  447 tgtaacgcctccgcttggtgggcatgtaacgcctgaggctgatgagggcgggg 499  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2606 tgtaacgcctccgcttggtgggcatgtaacgcccgaggctgatgagggcgggg 2554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 465 - 585
Target Start/End: Complemental strand, 18339 - 18219
Alignment:
Q  465 tgggcatgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctga 564  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  18339 tgggcatgtaacgctcgaggcggatgagggcggggagtggtccggctcctggcatgcttctaggcaacactgaatcacatcggaatgagagggatccaga 18240  T
Q  565 ggccgtacaggtatgggactg 585  Q
    |||||| ||||||||||||||    
T  18239 ggccgtgcaggtatgggactg 18219  T

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Target: scaffold0322; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 18958 - 19014
Alignment:
Q  529 caaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  18958 caaaactaaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactg 19014  T

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Target: scaffold0005 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 470 - 584
Target Start/End: Original strand, 245019 - 245133
Alignment:
Q  470 atgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccg 569  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||  |||  ||||||||||||||||||||||||||||||||||     
T  245019 atgtaacgcccaaggctgatgagggcggggagtggtccggctcttggcatgcatctagaaaaatatgaatcacatcggaatgagagggatcctgaggcca 245118  T
Q  570 tacaggtatgggact 584  Q
    |  ||||||||||||    
T  245119 tgtaggtatgggact 245133  T

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Target: scaffold0005; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 584
Target Start/End: Original strand, 245448 - 245562
Alignment:
Q  470 atgtaacgcctgaggctgatgagggcggggagtggtccggctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccg 569  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||  ||||| ||||||| |||| |||    
T  245448 atgtaacacccgaggctgatgagggcggggagtggtccggctcctggcttggttctaggaaaaactgaatcacatcataatgaaagggatcttgagtccg 245547  T
Q  570 tacaggtatgggact 584  Q
    |  ||||||||||||    
T  245548 tgtaggtatgggact 245562  T

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Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 532 - 584
Target Start/End: Complemental strand, 18285 - 18233
Alignment:
Q  532 aactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  18285 aactgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgtgact 18233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 17745 - 17697
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    |||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  17745 gaatgacatcagaatgagagggatcctgaggccgtgtaggtatgggact 17697  T

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Target: scaffold0557 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 749 - 797
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  749 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggact 797  T

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Target: scaffold0168 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 584
Target Start/End: Original strand, 2741 - 2789
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggact 584  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  2741 gaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgggact 2789  T

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Target: scaffold0664 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 585
Target Start/End: Complemental strand, 4130 - 4080
Alignment:
Q  535 tgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    ||||||||| | ||||||||||||||| |||||||| ||||||||||||||    
T  4130 tgaatcacaccagaatgagagggatcccgaggccgtgcaggtatgggactg 4080  T

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Target: scaffold0333 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 4560 - 4609
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||||||||| ||||||| |||||||||| | ||||||||||||||    
T  4560 gaatcacatcggaaggagagggttcctgaggccatgcaggtatgggactg 4609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 5015 - 5064
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| ||||||||||||| |||||||||| | ||||||||||||||    
T  5015 gaatcacaccggaatgagagggttcctgaggccatgcaggtatgggactg 5064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 506
Target Start/End: Original strand, 4917 - 4961
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtggtc 506  Q
    ||||||||||||||| ||| ||||||| ||||||| |||||||||    
T  4917 tggtgggcatgtaacacctaaggctgacgagggcgaggagtggtc 4961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 1219 - 1268
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| |||||||||| || |||||||||| | ||||||||||||||    
T  1219 gaatcacaccggaatgagacggttcctgaggccatgcaggtatgggactg 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 585
Target Start/End: Original strand, 23672 - 23721
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactg 585  Q
    |||||||| || |||||||||| || ||||||||| ||||||||||||||    
T  23672 gaatcacaccgaaatgagagggttcttgaggccgtgcaggtatgggactg 23721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 503
Target Start/End: Original strand, 154659 - 154700
Alignment:
Q  462 tggtgggcatgtaacgcctgaggctgatgagggcggggagtg 503  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  154659 tggtgggcatgtaacacccaaggctgatgagggcggggagtg 154700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 568
Target Start/End: Original strand, 2504 - 2536
Alignment:
Q  536 gaatcacatcggaatgagagggatcctgaggcc 568  Q
    |||||||||| ||||||||||||||||||||||    
T  2504 gaatcacatcagaatgagagggatcctgaggcc 2536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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