View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15594_low_1 (Length: 616)

Name: NF15594_low_1
Description: NF15594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15594_low_1
NF15594_low_1
[»] chr3 (21 HSPs)
chr3 (90-593)||(23659310-23659798)
chr3 (90-494)||(44471025-44471433)
chr3 (98-447)||(779276-779629)
chr3 (166-447)||(28550498-28550779)
chr3 (90-447)||(44681764-44682129)
chr3 (189-426)||(26757669-26757908)
chr3 (90-372)||(33231279-33231566)
chr3 (90-494)||(46892612-46892992)
chr3 (185-482)||(30554408-30554705)
chr3 (219-426)||(26918347-26918551)
chr3 (91-448)||(44285614-44285959)
chr3 (98-408)||(54246526-54246845)
chr3 (214-494)||(11503218-11503504)
chr3 (18-92)||(23660298-23660372)
chr3 (248-426)||(27524093-27524269)
chr3 (313-494)||(12937725-12937906)
chr3 (213-326)||(35847299-35847414)
chr3 (284-378)||(13870323-13870416)
chr3 (185-360)||(47831145-47831317)
chr3 (280-447)||(22240562-22240729)
chr3 (453-494)||(33231589-33231630)
[»] chr7 (28 HSPs)
chr7 (100-503)||(48070613-48071017)
chr7 (90-494)||(25544976-25545385)
chr7 (185-447)||(31136200-31136456)
chr7 (90-494)||(12471506-12471911)
chr7 (211-494)||(12470904-12471187)
chr7 (198-465)||(12470107-12470368)
chr7 (185-504)||(3996814-3997130)
chr7 (234-426)||(44523590-44523781)
chr7 (162-345)||(32971381-32971570)
chr7 (185-378)||(35738005-35738195)
chr7 (162-421)||(2197517-2197775)
chr7 (90-238)||(39571569-39571722)
chr7 (198-278)||(49124440-49124520)
chr7 (198-303)||(2501933-2502038)
chr7 (211-360)||(12012836-12012984)
chr7 (185-426)||(27226783-27227013)
chr7 (162-278)||(45595569-45595681)
chr7 (341-426)||(2923029-2923114)
chr7 (162-420)||(46265154-46265407)
chr7 (211-265)||(2923125-2923179)
chr7 (211-385)||(46993365-46993539)
chr7 (198-413)||(21378445-21378660)
chr7 (231-362)||(19602226-19602357)
chr7 (325-423)||(22331986-22332084)
chr7 (198-255)||(48638208-48638265)
chr7 (316-494)||(1194445-1194622)
chr7 (287-356)||(45595477-45595546)
chr7 (345-426)||(7995021-7995102)
[»] chr2 (24 HSPs)
chr2 (90-447)||(37630385-37630743)
chr2 (198-494)||(29109044-29109340)
chr2 (189-447)||(5526272-5526529)
chr2 (221-422)||(27866691-27866889)
chr2 (90-419)||(3689877-3690200)
chr2 (90-331)||(33036811-33037052)
chr2 (164-299)||(22848055-22848190)
chr2 (217-419)||(38607049-38607254)
chr2 (162-277)||(10722020-10722137)
chr2 (306-427)||(3919845-3919966)
chr2 (211-448)||(44018838-44019069)
chr2 (162-278)||(30906686-30906802)
chr2 (285-426)||(4240735-4240877)
chr2 (190-361)||(30340512-30340681)
chr2 (335-494)||(35961755-35961914)
chr2 (199-277)||(28199803-28199881)
chr2 (280-380)||(30906822-30906921)
chr2 (188-253)||(3919746-3919812)
chr2 (162-274)||(4240920-4241028)
chr2 (313-418)||(7772058-7772163)
chr2 (288-415)||(32296688-32296814)
chr2 (335-378)||(10721965-10722008)
chr2 (341-494)||(35954770-35954923)
chr2 (168-252)||(41068648-41068732)
[»] chr8 (16 HSPs)
chr8 (90-447)||(3767429-3767787)
chr8 (165-483)||(16570711-16571028)
chr8 (174-447)||(32321854-32322128)
chr8 (185-426)||(25456001-25456242)
chr8 (162-403)||(9040511-9040752)
chr8 (200-504)||(9505013-9505332)
chr8 (185-372)||(37379905-37380089)
chr8 (185-367)||(25808154-25808336)
chr8 (343-441)||(34760833-34760931)
chr8 (185-294)||(3555287-3555394)
chr8 (43-92)||(42141330-42141379)
chr8 (90-278)||(20860149-20860342)
chr8 (185-278)||(25343981-25344074)
chr8 (271-385)||(25344087-25344201)
chr8 (268-325)||(20860358-20860415)
chr8 (230-310)||(40434868-40434948)
[»] chr6 (17 HSPs)
chr6 (119-426)||(11846316-11846628)
chr6 (162-423)||(9826816-9827077)
chr6 (90-494)||(23300433-23300832)
chr6 (164-494)||(2453955-2454287)
chr6 (189-384)||(11971528-11971723)
chr6 (219-494)||(7176390-7176657)
chr6 (248-447)||(32613784-32613977)
chr6 (340-426)||(23301487-23301573)
chr6 (198-447)||(7551280-7551525)
chr6 (214-442)||(23585913-23586143)
chr6 (90-239)||(26186474-26186629)
chr6 (212-301)||(1208759-1208848)
chr6 (199-418)||(26879863-26880074)
chr6 (201-278)||(20722498-20722575)
chr6 (291-384)||(26186656-26186749)
chr6 (225-326)||(12263165-12263264)
chr6 (188-244)||(5416283-5416339)
[»] chr4 (12 HSPs)
chr4 (211-494)||(53393050-53393333)
chr4 (185-423)||(42141327-42141556)
chr4 (185-447)||(8606003-8606263)
chr4 (90-339)||(19681838-19682092)
chr4 (211-447)||(24466210-24466446)
chr4 (185-273)||(13207258-13207347)
chr4 (189-302)||(23107779-23107893)
chr4 (243-326)||(39838950-39839033)
chr4 (271-359)||(8056854-8056942)
chr4 (343-426)||(4413530-4413613)
chr4 (388-447)||(13207448-13207507)
chr4 (387-441)||(55106666-55106720)
[»] chr1 (13 HSPs)
chr1 (90-371)||(32678226-32678511)
chr1 (162-426)||(11911661-11911923)
chr1 (323-447)||(513008-513132)
chr1 (202-424)||(17530682-17530907)
chr1 (317-494)||(8414579-8414756)
chr1 (159-426)||(27320324-27320574)
chr1 (90-265)||(8414319-8414498)
chr1 (189-310)||(4919595-4919714)
chr1 (322-393)||(44581809-44581880)
chr1 (282-426)||(4407736-4407880)
chr1 (343-494)||(16584891-16585042)
chr1 (343-447)||(25785806-25785910)
chr1 (312-368)||(38601808-38601864)
[»] chr5 (12 HSPs)
chr5 (185-483)||(1498063-1498361)
chr5 (214-494)||(17770220-17770500)
chr5 (211-424)||(7239174-7239387)
chr5 (211-424)||(7244350-7244563)
chr5 (316-494)||(29126091-29126269)
chr5 (162-227)||(20665643-20665708)
chr5 (201-378)||(39786072-39786251)
chr5 (211-302)||(31896083-31896174)
chr5 (248-494)||(19947716-19947962)
chr5 (286-378)||(41091971-41092063)
chr5 (90-146)||(1497963-1498019)
chr5 (267-443)||(16746372-16746548)
[»] scaffold0590 (1 HSPs)
scaffold0590 (198-443)||(8226-8470)
[»] scaffold0070 (2 HSPs)
scaffold0070 (185-426)||(13822-14063)
scaffold0070 (186-278)||(33947-34039)
[»] scaffold0564 (1 HSPs)
scaffold0564 (162-503)||(6310-6642)
[»] scaffold0002 (1 HSPs)
scaffold0002 (90-331)||(344123-344364)
[»] scaffold0879 (1 HSPs)
scaffold0879 (211-447)||(475-711)
[»] scaffold1335 (1 HSPs)
scaffold1335 (213-326)||(849-964)
[»] scaffold1194 (1 HSPs)
scaffold1194 (165-240)||(2396-2471)
[»] scaffold0565 (1 HSPs)
scaffold0565 (197-426)||(1728-1954)


Alignment Details
Target: chr3 (Bit Score: 403; Significance: 0; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 90 - 593
Target Start/End: Complemental strand, 23659798 - 23659310
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactgcagctagagttcttagtagaaacaaaatagactacgagtg 189  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  23659798 aaactaacaagagatggacaatcccagcagcaatgaagaacgatgagttaggtgtgactgcagctagagttcttagtagaaacgaaatagactgcgagtg 23659699  T
Q  190 atgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgt--gtgtcaggaggga 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  23659698 atgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtgtgaggaggga 23659599  T
Q  288 taatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcatt 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23659598 taatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcatt 23659499  T
Q  388 ttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaa 487  Q
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  23659498 -----------------ggttttgaaccgaaccaaacaaaattagatactttttcgatttagaacggtttgaattttcggtttcatcgattttgtctgaa 23659416  T
Q  488 ccacttatgcccctaattgtggttacaaaggaaaaatgtggtggttttttatggtgataaggttgttgttggaaggtggatgataagggatttctctaat 587  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23659415 ccacttatacccctaattgtggttacaaaggaaaaatgtggtggttttttatggtgataaggttgttgttggaaggtggatgataagggatttctctaat 23659316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 90 - 494
Target Start/End: Complemental strand, 44471433 - 44471025
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagag---ttcttagtagaaacaaaatagactacg 185  Q
    ||||||| |||||||||||||||||||| ||  ||| |||||||| |||||| |||||| || ||||| |   || ||||||| ||| ||||||| |  |    
T  44471433 aaactaacaagagatggacgatcccagcggctctgaggaacgatgggttaggggtgactagcggctagtgttatttttagtagtaacgaaatagagtgtg 44471334  T
Q  186 agtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagg 285  Q
    ||||||| ||| ||||||| || | ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| |||||||||| | ||||||    
T  44471333 agtgatgtgatgagatgataatgggagaaagtgaatgaattatggagtattttatgttagcctttaattttgagcttaatcataagtgtgtttgaggagg 44471234  T
Q  286 gataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatca 385  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| |||||||||||     
T  44471233 gataatattactaaactggggagttatgttagcatcggttcggttcatcggttctttggatttcaaaattaaaaaccaagaaccgaaccaaactagatcg 44471134  T
Q  386 ttttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctg 485  Q
     ||||| || ||| |||||||||||||||||||| ||||||  |  ||||| |||||||||| |  ||||||| ||||||  |||||||| ||||||| |    
T  44471133 gtttagattggtttggttcggttttgaaccgaactaaacaaggtcggatacattttcggtttggttcggtttggattttcgatttcatcggttttgtccg 44471034  T
Q  486 aaccactta 494  Q
    |||||||||    
T  44471033 aaccactta 44471025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 98 - 447
Target Start/End: Original strand, 779276 - 779629
Alignment:
Q  98 aagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagagttctt----agtagaaacaaaatagactacgagtgatg 192  Q
    ||||||||||| |||||||| ||| ||| |||||||| ||||||||||||| || ||||| ||||||    | ||||||| ||||||| |  ||||||||    
T  779276 aagagatggacaatcccagcggcggtgaggaacgatgggttaggtgtgactagcggctagtgttcttttctattagaaacgaaatagagt--gagtgatg 779373  T
Q  193 agataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataata 292  Q
    |||| |||||||||| | ||||||||| ||||||| | ||||||||||||||| ||||||||||||| ||||| |||||||| ||| ||||| |||| ||    
T  779374 agatgagatgatgatggaagaaagtgagtgaattatgaagtattttatgttggcctttaattttgagtttaatcataagtgtatgtgaggagtgatagta 779473  T
Q  293 ttactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctc-aaaattaaaaaccaagaaccgaatcaaactagatcattttag 391  Q
    |||| ||||||||||||||  ||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||| ||||||||||   |||||    
T  779474 ttacaaaaatggagagtgagattagcatcggttcggttcatcggttctttggatttcaaaaattaaaaaccaagaaccgaaccaaactagattggtttag 779573  T
Q  392 gtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    ||| ||||| ||| |||||||||||||| ||||||  || ||||||||||||||||    
T  779574 gttggttcgattctgttttgaaccgaactaaacaaggttggatactttttcggttt 779629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 166 - 447
Target Start/End: Complemental strand, 28550779 - 28550498
Alignment:
Q  166 tagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaat 265  Q
    ||||||| ||||||| |  |||||||||||| |||||||||| | |||||||||||||||| || ||||||||| ||||||||||||||||||| |||||    
T  28550779 tagaaacgaaatagaatgtgagtgatgagatgagatgatgatgggagaaagtgaatgaattgagaagtattttacgttggactttaattttgagtttaat 28550680  T
Q  266 tataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaag 365  Q
     |||||||||||| ||||| ||||||||| | ||||| | |||||| |||| ||||| ||||||||| |||||| || ||||||||||||||||||| ||    
T  28550679 cataagtgtgtgtgaggagagataatattgccaaaatagggagtgaggttaacatcgattcggttcatcggttctttagatctcaaaattaaaaaccgag 28550580  T
Q  366 aaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    || |||| |||||||||||  |||| ||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  28550579 aatcgaaccaaactagatccgtttaagttggttcggttcggatttgaaccgaaccaaacaaagttagatactttttcggttt 28550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 90 - 447
Target Start/End: Original strand, 44681764 - 44682129
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactg-cagctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| |||||||||| ||||||| |  |||||| |||||||  |||||||||||||| | | ||| ||||||    |||| |||| ||||||| ||     
T  44681764 aaactaacaagagatggatgatcccaacgacgatgaggaacgattggttaggtgtgactggcggatagcgttcttttttagtataaacgaaatagattat 44681863  T
Q  185 gagtgatgagataagatgatgatagt---agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcag 281  Q
    |||||||||||| ||||||||||  |   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  44681864 gagtgatgagatgagatgatgatgatgggagaaagtaaatgaattaaggagtattttatgttggactttaattttgagcttaatcataagtgtgtgtgag 44681963  T
Q  282 gagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactag 381  Q
     | |||||||||||||  |||||  ||||| ||||||||||||||||||   |||||||| |||| |||||||||||||||||||||| || ||||||||    
T  44681964 aacggataatattact-caatgggaagtgaggttagcatcggttcggtttgtcggttcatcggatttcaaaattaaaaaccaagaaccaaaccaaactag 44682062  T
Q  382 atcattttaggttt-gttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    |||  ||||||||| |||| |||||||||||| |||||||||||||  |   |||||||||||||||    
T  44682063 atcggtttaggtttggttcagttcggttttgatccgaaccaaacaaggtcgtatactttttcggttt 44682129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 189 - 426
Target Start/End: Complemental strand, 26757908 - 26757669
Alignment:
Q  189 gatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcag--gaggg 286  Q
    |||||||| ||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |  || ||    
T  26757908 gatgagatgagatgatgatgagagaaagtgaatgaattaaggagtattttatgttgaactttaattttgagcttaatcataagtgtgtgtgtgtggaagg 26757809  T
Q  287 ataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcat 386  Q
    ||||||||||||||||||||||||| ||||  |||||||| ||| | || ||| ||||||||||||||||||| |||||||||||| ||| ||| |||      
T  26757808 ataatattactaaaatggagagtgaggttactatcggttcagtttatcgattctttggatctcaaaattaaaatccaagaaccgaaccaatctatatcga 26757709  T
Q  387 tttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    |||||||| ||||||||| ||||| |||  ||||||||||    
T  26757708 tttaggttggttcggttcagttttaaactaaaccaaacaa 26757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 90 - 372
Target Start/End: Original strand, 33231279 - 33231566
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagagttcttagt----agaaacaaaatagactac 184  Q
    ||||||| |||||||||||||||||||| | | ||| |||| ||| ||||||||||||| || |||||  |||||  |    |||||| ||||||| |      
T  33231279 aaactaacaagagatggacgatcccagcggtggtgaggaacaatgggttaggtgtgactagcggctagtattcttttttaccagaaacgaaatagagtgt 33231378  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    ||| |||||||| ||||||||||   ||||||||||||||||  ||||||||||||| ||  ||||||||||||||||||| |||||||| | | |||||    
T  33231379 gagcgatgagatgagatgatgatgtgagaaagtgaatgaattgtggagtattttatgctgacctttaattttgagcttaatcataagtgtatatgaggag 33231478  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaa 372  Q
    | |||||||||||||||||| |||||| |||||||||||||||||||| |||||| | | || |||||||||||||||||||||||||    
T  33231479 gtataatattactaaaatggggagtgaggttagcatcggttcggttcatcggttcttcgaatttcaaaattaaaaaccaagaaccgaa 33231566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 90 - 494
Target Start/End: Complemental strand, 46892992 - 46892612
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactg-cagctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| |||||||||||||||||| |  | |||||||||||||||||||||||||||| ||| ||| ||||||    ||||||||| ||||||| |      
T  46892992 aaactaacaagagatggacgatcccaacgacaatgaagaacgatgagttaggtgtgactgacagatagtgttcttttttagtagaaacgaaatagattgt 46892893  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    ||||| |||||| |||           ||||||||||||||||||||||||||||||||| |||||||||||||| | |||  ||||||||||| | |||    
T  46892892 gagtggtgagatgaga-----------gaaagtgaatgaattaaggagtattttatgttgaactttaattttgagatcaatcgtaagtgtgtgtgatgag 46892804  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||||||||||||||  |||||| |||||||||||||         |||||||||||||||||||||||||||| |||| |||| |||||||||      
T  46892803 ggataatattactaaaatgaggagtgaggttagcatcggtt--------tggttcattggatctcaaaattaaaaaccgagaatcgaaccaaactaga-- 46892714  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtct 484  Q
            || ||| ||||||||||| |||||||||||||||  |  |||| ||||||||||| |  |||||||||||||  ||||||||| ||||| |     
T  46892713 --------ttggtttggttcggttttaaaccgaaccaaacaaggtcggatattttttcggtttggttcggtttgaattttttgtttcatcggttttgccc 46892622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 185 - 482
Target Start/End: Original strand, 30554408 - 30554705
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||| |  || |||||| | ||||||||||| ||| |  ||||||||| ||||| | || ||||||||||| ||| | |||||||||| | |||    
T  30554408 gagtgatgagttgtgacgatgatgggagaaagtgaataaatcattgagtattttttgttgtatttgaattttgagctcaatcacaagtgtgtgtgatgag 30554507  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    ||||||| |||| ||| |||  ||||| | | ||||||||||| |||| | |||| |||||| ||||||||||||| | ||||||||| |||||||||||    
T  30554508 ggataatgttacaaaattgggaagtgaggatggcatcggttcgattcatcagttctttggatatcaaaattaaaaatcgagaaccgaaccaaactagatc 30554607  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgt 482  Q
      ||||| || |||||||||| ||||||||||||| ||||||  |  ||||||||||||||||||  || |||| |||||| ||||||||||||||||    
T  30554608 ggtttagattggttcggttcgattttgaaccgaactaaacaaggtcggatactttttcggtttagctcgatttggattttcggtttcatcgattttgt 30554705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 26918347 - 26918551
Alignment:
Q  219 aatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagc 318  Q
    |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||   ||||||    
T  26918347 aatgaattaaggagcatattatgctggactttaattttgagcttaattataagtgtgtg--aggagggataatattactaaaatagggagtagggttagc 26918444  T
Q  319 atcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaa 418  Q
    ||| ||||| |||| ||| || ||| ||||||||||||||||   ||||| ||| |||||||||||| |||||||| |||||||| |||||||||| ||     
T  26918445 atcagttcgattcatcggctctttgaatctcaaaattaaaaattgagaactgaaccaaactagatcaatttaggttggttcggtt-ggttttgaactgag 26918543  T
Q  419 ccaaacaa 426  Q
    ||||||||    
T  26918544 ccaaacaa 26918551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 91 - 448
Target Start/End: Complemental strand, 44285959 - 44285614
Alignment:
Q  91 aactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagagttctt----agtagaaacaaaatagactacg 185  Q
    |||||| | |||||||||||||||| ||| | ||| |||||||| ||||||||| | | || ||||  ||||||    ||||||||| ||||||| |  |    
T  44285959 aactaacacgagatggacgatcccaacagaggtgaggaacgatgggttaggtgtaagtagcggctaatgttcttttttagtagaaacgaaatagagtgtg 44285860  T
Q  186 agtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt--cagga 283  Q
    | ||||||||| ||| |||||| | ||||||||||||||||| ||||||||||||||||| ||||      ||||||||| ||||||||||||  |||||    
T  44285859 aatgatgagatgagacgatgatgggagaaagtgaatgaattatggagtattttatgttggccttt------gagcttaatcataagtgtgtgtgtcagga 44285766  T
Q  284 gggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagat 383  Q
    | ||||||||||||||||||| |||||| |||| ||| |||||              ||| || ||||||||||||||| ||||| ||| ||||||| ||    
T  44285765 gtgataatattactaaaatggggagtgaggttaacataggttct-------------ttgaatttcaaaattaaaaaccgagaactgaaccaaactaaat 44285679  T
Q  384 cattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttta 448  Q
    |  |||||||| |||||||||||||||||||||||||||||||  | | ||| ||||||||||||    
T  44285678 cgatttaggttggttcggttcggttttgaaccgaaccaaacaaggtcatatattttttcggttta 44285614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 98 - 408
Target Start/End: Complemental strand, 54246845 - 54246526
Alignment:
Q  98 aagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagagttctt----agtagaaacaaaatagactacgagtgatg 192  Q
    |||||||||| ||||||| | ||| ||| |||| ||| ||||| ||||||| |||| ||  ||||||    ||||||||| ||||| | |  || |||||    
T  54246845 aagagatggatgatcccaacggcggtgaggaacaatgggttagatgtgacttgcagataatgttctttttcagtagaaacgaaatatagtgtgactgatg 54246746  T
Q  193 agataagatgatgatagtagaaagtgaatgaattaa---ggagtattttatgttggactttaattttgagcttaattataagtgtgt-gtcaggagggat 288  Q
    |||| |||||||||    |||||||||||| |||||   ||||||||||||||||||||||||||||||||||||  |||  ||| | || ||||| |||    
T  54246745 agatgagatgatgacgagagaaagtgaatgtattaataaggagtattttatgttggactttaattttgagcttaagcatagatgttttgtgaggagcgat 54246646  T
Q  289 aatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattt 388  Q
     |||||| |||||||| |||||| ||||||||||||| |||||  |||||| ||||||||||||||||||||   ||||||||| |||||   |||  ||    
T  54246645 gatattaataaaatggggagtgaagttagcatcggtttggttcgtcggttctttggatctcaaaattaaaaattgagaaccgaaccaaacattatcggtt 54246546  T
Q  389 taggtttgttcggttcggtt 408  Q
    | |||| |||||||||||||    
T  54246545 tgggttggttcggttcggtt 54246526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 214 - 494
Target Start/End: Original strand, 11503218 - 11503504
Alignment:
Q  214 aagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtc------aggagggataatattactaaaatggaga 307  Q
    ||||||||| |||| | ||||||||||||||| |||||||||||  | |||| ||||||||||||       ||||||||||||| || |||||||| ||    
T  11503218 aagtgaatggattatgtagtattttatgttgggctttaattttggacataatcataagtgtgtgtgtgtgtgaggagggataataatagtaaaatgggga 11503317  T
Q  308 gtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggt 407  Q
    |||| |||||||| ||||||||| | |||||  |||||||||||||| ||||| | |||||| || ||||  |||||  ||| | || ||||||||||||    
T  11503318 gtgaggttagcatgggttcggtttatcggtttcttggatctcaaaatgaaaaatcgagaaccaaaccaaataagatcggtttcgattggttcggttcggt 11503417  T
Q  408 tttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||||||  |||| ||||  |  ||||| |||| ||||| |  ||||||| | |||||||||||||| |||| ||| |||| ||||    
T  11503418 tttgaaccttaccagacaaggtcggatacatttttggtttggttcggtttggactttcagtttcatcggttttatcttaaccgctta 11503504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 23660372 - 23660298
Alignment:
Q  18 ttaaggtttcgttcgctccaagggaaatcggaaactaagaagagaaagaggaagaacgaggttaatgttgagaaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  23660372 ttaaggtttcgttcgctccaagggaaattggaaactaagaagagaaagaggaagaacgaggttagtgttgagaaa 23660298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 248 - 426
Target Start/End: Complemental strand, 27524269 - 27524093
Alignment:
Q  248 tttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatc 347  Q
    ||||| |||| || |||| |||||||||||  ||||| ||||||| || |||||||| |||||  |||| ||| ||||||||||| || ||| |||||||    
T  27524269 tttaactttgggcctaatcataagtgtgtg--aggagagataataatagtaaaatggggagtggggttaccattggttcggttcatcgattccttggatc 27524172  T
Q  348 tcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    | ||||||||||||  ||||||||| ||||| || ||  ||||| || ||| |||| |||||||| |||||||||||||    
T  27524171 tgaaaattaaaaacagagaaccgaaccaaacaaggtcgatttagattggtttggtttggttttgatccgaaccaaacaa 27524093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 494
Target Start/End: Original strand, 12937725 - 12937906
Alignment:
Q  313 gttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttga 412  Q
    |||| |||||||| ||||||  || || |||||||| || || |||||   ||||||||| |||| | ||||  |||||||| ||||||||||||||| |    
T  12937725 gttaacatcggtttggttcattggatctttggatcttaagatgaaaaattgagaaccgaaccaaaattgatcggtttaggttggttcggttcggttttca 12937824  T
Q  413 accgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    | | |||||||||||||   ||||||||||| |||||  ||||||| |||||| |||||||||||||| || ||| ||||||    
T  12937825 atcaaaccaaacaaaatctaatactttttcgatttagttcggtttggattttcggtttcatcgattttatccgaatcactta 12937906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 35847414 - 35847299
Alignment:
Q  213 aaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcag--gagggataatattactaaaatggagagtg 310  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||  || |||| |||| ||||||| ||  ||| |||||||||| ||||||||||||||    
T  35847414 aaagtgaatgaattaaaaagtatattatgttggattttaattttaggcctaatcataaatgtgtgtgagatgagagataatattaataaaatggagagtg 35847315  T
Q  311 atgttagcatcggttc 326  Q
    | ||||||||||||||    
T  35847314 aggttagcatcggttc 35847299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 13870416 - 13870323
Alignment:
Q  284 gggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaac 378  Q
    ||||| |||||| |||||||| | |||| |||||||||||||||||    |||||| |||||||||||||| |||||||||||||||||||||||    
T  13870416 gggatgatattagtaaaatggggggtga-gttagcatcggttcggtctttcggttctttggatctcaaaatcaaaaaccaagaaccgaatcaaac 13870323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 360
Target Start/End: Original strand, 47831145 - 47831317
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    ||||||| || | |||||||||| | |||||||||| ||| |||||||||||||||  | | |||||||||| || || |  |||||||| ||  || |     
T  47831145 gagtgataaggtgagatgatgatgggagaaagtgaaagaagtaaggagtattttatacttggctttaattttaagtttgacgataagtgtttg--agaaa 47831242  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaa 360  Q
    ||||||||||| |||||| | |||||  |||| |||||||| ||||||  ||||  |||||||||||||| |||||    
T  47831243 ggataatattagtaaaattgggagtg-ggttaacatcggtttggttcataggttttttggatctcaaaataaaaaa 47831317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 447
Target Start/End: Complemental strand, 22240729 - 22240562
Alignment:
Q  280 aggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaact 379  Q
    |||||||||| |||||  ||||| ||||||||  ||| |||||||| |||| | |||||| ||||||||||||||  |||||| |||| |||| | | |     
T  22240729 aggagggatagtattagaaaaatagagagtgagattatcatcggtttggtttatcggttccttggatctcaaaatgtaaaaccgagaatcgaacccagca 22240630  T
Q  380 agatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    || ||  ||||| || |||||||||| || |||||| ||||| |||   |  ||||||||||||||||    
T  22240629 aggtcgatttagtttggttcggttcgattatgaacctaaccagacatggtcggatactttttcggttt 22240562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 494
Target Start/End: Original strand, 33231589 - 33231630
Alignment:
Q  453 ggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  33231589 ggtttgaattttcggtttcatcgattttgtccgaaccactta 33231630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 4e-89; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 100 - 503
Target Start/End: Complemental strand, 48071017 - 48070613
Alignment:
Q  100 gagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactg-cagctagagttctt----agtagaaacaaaatagactacgagtgatgag 194  Q
    |||||||||||||||  | |||| || |||||||||||||||||||| || | ||||| ||||||    ||||||||| ||||| | |    ||||||||    
T  48071017 gagatggacgatcccgacggcgacgaggaacgatgagttaggtgtgaatggcggctagtgttcttttttagtagaaacgaaataaagt----gtgatgag 48070922  T
Q  195 ataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatatt 294  Q
    ||||||||| |||   ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| | |||||||| ||||    
T  48070921 ataagatgaggatgaaagaaagtgaatgaattaagaagtattttatgttggactttaattttgagattaatcataagtgtgtgtgaagagggatattatt 48070822  T
Q  295 actaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtt 394  Q
    ||| |||||| |||||| |||| ||||||||| ||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  48070821 actgaaatggtgagtgaggttaacatcggttcagtttatcggttctttggatctcaaaattaaaaaccgagaaccgaatcaaactagatcggtttaggtt 48070722  T
Q  395 tgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
     |||||||||||||||||||| || |||||||  |  |||| ||||| |||||||  ||||||  |||||| |||| |||||||||||| ||||||||||    
T  48070721 agttcggttcggttttgaaccaaatcaaacaaggtcggatatttttttggtttagttcggtttagattttcggtttgatcgattttgtccgaaccactta 48070622  T
Q  495 tgcccctaa 503  Q
      |||||||    
T  48070621 cacccctaa 48070613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 90 - 494
Target Start/End: Original strand, 25544976 - 25545385
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagagttc----ttagtagaaacaaaatagactac 184  Q
    |||||||  ||||||||||||||||| |  || ||| |||||||| ||||||||||||| || ||||| ||||    ||||||||||||||||||  |      
T  25544976 aaactaacgagagatggacgatcccaacgacggtgaggaacgatgggttaggtgtgactagcggctagtgttcatttttagtagaaacaaaatagggttg 25545075  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| ||||| || | | ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| |||||||| ||| |||      
T  25545076 gagtgatgagatgagatggtgttgggagaaagtgaatgaattatggagtattttatgttgacctttaattttgagcttaatcataagtgtatgtgaggca 25545175  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||||||||||||||| |||||| |||||||| |||||| ||||  ||||| |||||| | ||||||||||    |||||| || |||||||||||    
T  25545176 ggataatattactaaaatggggagtgaggttagcattggttcgattcattggttctttggattttaaaattaaaagttgagaaccaaaccaaactagatc 25545275  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtct 484  Q
      |||||||| |||  |||||||||||||||||||||| |||  |   |||||||||  |||| |  ||||||||||||||  ||| |||||||||||||    
T  25545276 ggtttaggttggtttagttcggttttgaaccgaaccaatcaaggtcgaatacttttttagttttgctcggtttgaattttcgattttatcgattttgtct 25545375  T
Q  485 gaaccactta 494  Q
    ||||||||||    
T  25545376 gaaccactta 25545385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 31136456 - 31136200
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||| |    
T  31136456 gagtgatgagataagatgatgataggagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattatgaatgtgtgcgagg-g 31136358  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||||||||| ||||  ||||||  ||||||||||||||||||| |||||| ||||||||| |||||  |||||||||||| || |||| || ||     
T  31136357 ggataatattactataatgatgagtgagtttagcatcggttcggttcatcggttctttggatctcgaaatttgaaaccaagaaccaaaccaaattatatt 31136258  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
      ||||||||     ||||||||||||||||||| |||||||  |  ||||||||||||||||    
T  31136257 ggtttaggtt-----ggttcggttttgaaccgaatcaaacaaggtcggatactttttcggttt 31136200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 90 - 494
Target Start/End: Original strand, 12471506 - 12471911
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactgcagctagagttc----ttagtagaaacaaaatagactacg 185  Q
    ||||||| |||| ||||||||||||| |  || ||| |||||||| |||| |||||||||  ||||  ||||    ||||||||||||||||||| |  |    
T  12471506 aaactaacaagacatggacgatcccaacgacggtgaggaacgatgggttatgtgtgactgacgctaatgttcttttttagtagaaacaaaatagagt--g 12471603  T
Q  186 agtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagg 285  Q
    ||||||||||| |||||||||| | ||||||||| | ||  ||||||||||||||| || |||||||||||||| | | | |||| ||||| | | ||||    
T  12471604 agtgatgagatgagatgatgatgggagaaagtgagtaaacaaaggagtattttatggtgaactttaattttgagttgattcataattgtgtatgaagagg 12471703  T
Q  286 gataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatca 385  Q
    ||||||||||||||||||  |||||| |||| ||||| ||| ||||| || ||| ||| ||||||||||||||||| ||||||||||  ||||||||||     
T  12471704 gataatattactaaaatgaggagtgaggttaacatcgattcagttcatcgattctttgaatctcaaaattaaaaactaagaaccgaactaaactagatcg 12471803  T
Q  386 ttttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctg 485  Q
     |||| ||| ||||||||||||||||||| ||||| || || || |||||| ||||| |||| |  ||||||| ||||||| |||||||| |||| || |    
T  12471804 atttaagttggttcggttcggttttgaacagaacc-aataagatgagatacgttttcagttttgttcggtttggattttcaatttcatcggttttatccg 12471902  T
Q  486 aaccactta 494  Q
    |||||||||    
T  12471903 aaccactta 12471911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 211 - 494
Target Start/End: Original strand, 12470904 - 12471187
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| | | ||| ||||  |||| | | || |||||||||||||||||||| |||||    
T  12470904 agaaagtgaatgaatcaaggagtattttatggtggactttaattttgggttgaatcataatggtgtatgaagaaggataatattactaaaatggggagtg 12471003  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggtttt 410  Q
    |  ||| ||||| ||  ||||| |||||  |||||||||||||||||||||  |||||||||  |||||||| |  |||||||| ||| |||||| ||||    
T  12471004 agattaacatcgattaagttcatcggttttttggatctcaaaattaaaaactgagaaccgaactaaactagaccgatttaggttggttaggttcgatttt 12471103  T
Q  411 gaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    |||| ||||||||||  || |||||||||||| |||| |  ||||||||||| || ||||||||| |||| ||  |||||||||    
T  12471104 gaactgaaccaaacaggatcagatactttttcagttttgttcggtttgaattctcggtttcatcggttttatccaaaccactta 12471187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 198 - 465
Target Start/End: Original strand, 12470107 - 12470368
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattact 297  Q
    |||||||||| | ||| ||||||||||| || |||||||||||||||||||||||||||||| | ||| |||||||||||  | ||||||||||||||||    
T  12470107 agatgatgatgggagagagtgaatgaatcaaagagtattttatgttggactttaattttgagttgaatcataagtgtgtg--aagagggataatattact 12470204  T
Q  298 aaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgt 397  Q
    ||||||| || |||  ||||||||  ||  ||||| |||||| |||||||||||||||| |||| |||||| ||| ||||||||||   |||||||| |     
T  12470205 aaaatggggactgagattagcatcaatttagttcatcggttctttggatctcaaaattagaaactaagaacggaaccaaactagattggtttaggttggc 12470304  T
Q  398 tcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttc 465  Q
    |||||| | |||| |||||    |||||| || |||||||||||| |||| |  ||||||||||||||    
T  12470305 tcggtttgatttttaaccg----aaacaagatcagatactttttcagttttgttcggtttgaattttc 12470368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 185 - 504
Target Start/End: Original strand, 3996814 - 3997130
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    ||||||||| || |||||||||    ||||||||||||| ||||| ||||||||||| | ||||||||||||| || |||| |||||||||||  |||||    
T  3996814 gagtgatgaaatgagatgatgacgagagaaagtgaatgacttaagaagtattttatgcttgactttaattttgggcataatcataagtgtgtg--aggag 3996911  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
     | || ||||| |||||| | |||||  |||| || ||||||||||||  ||||| |||||||||||||| |||| || ||||||||| ||||| || |     
T  3996912 agttattattagtaaaattgggagtggagttaccaacggttcggttcataggttccttggatctcaaaatgaaaa-ccgagaaccgaaccaaacaaggtt 3997010  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtct 484  Q
      ||||| || ||| |||||||||||||||| ||||||||||| |  ||| ||| |||||||| | |||||||| | |||| ||||||| | |||||||     
T  3997011 ggtttagattggttaggttcggttttgaaccaaaccaaacaaagtcggattcttcttcggtttggtacggtttggactttcggtttcattggttttgtcc 3997110  T
Q  485 gaaccacttatgcccctaat 504  Q
    ||||||||||  ||||||||    
T  3997111 gaaccacttacacccctaat 3997130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 234 - 426
Target Start/End: Original strand, 44523590 - 44523781
Alignment:
Q  234 attttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcac 333  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||  |||| ||| ||| |     
T  44523590 attttatgttggactttaattttgagcataatcataagtgtgtgtgaggagcgataatattactaaaatggagagtgaggttaatatcgattcagtttat 44523689  T
Q  334 cggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    || ||| |||| ||||||||||||||| | ||||||||| |||| || ||   |||||||| |||||||| | ||||||||||||||||||||    
T  44523690 cgtttctttgg-tctcaaaattaaaaatcgagaaccgaaccaaattatattggtttaggttggttcggtttgattttgaaccgaaccaaacaa 44523781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 162 - 345
Target Start/End: Complemental strand, 32971570 - 32971381
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    |||| ||||| |||||||| |  |||||||||||| |||||||||| | || | ||||||| ||||| ||||| |||||||||||||||||||||||||     
T  32971570 ttagaagaaataaaatagagtttgagtgatgagatgagatgatgattgaagtaggtgaatggattaaagagtagtttatgttggactttaattttgagcc 32971471  T
Q  262 taattataagtgt------gtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattgga 345  Q
    |||| ||||||||      |||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| || |||||| |||||    
T  32971470 taatcataagtgtgtgtgtgtgtgaggagggataatatttcaaaaatggagagtgaggttagcatcggttcggtccaacggttccttgga 32971381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 185 - 378
Target Start/End: Original strand, 35738005 - 35738195
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| |||||||||| | |||| ||||||| ||||||||||||||||||||||| |||||||||| || |||| |||||||||||  | |||    
T  35738005 gagtgatgagatgagatgatgatgggagaa-gtgaatggattaaggagtattttatgttggaatttaattttgggcctaatcataagtgtgtg--atgag 35738101  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaac 378  Q
    ||||||||||| |||||||| |||||  ||||  ||| ||| |||| | |||||| |||||||||||||| ||||||  ||||||||| |||||    
T  35738102 ggataatattagtaaaatggggagtggggttacaatcagtttggttgatcggttccttggatctcaaaatgaaaaactgagaaccgaaccaaac 35738195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 162 - 421
Target Start/End: Original strand, 2197517 - 2197775
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    ||||||||||  ||||||| |  |||||||||||| ||||||| |  | ||||||||||   |||||| ||||||||||||||| || |||||| || ||    
T  2197517 ttagtagaaatgaaatagagtctgagtgatgagatgagatgataacggaagaaagtgaacatattaagtagtattttatgttgggctctaatttcgacct 2197616  T
Q  262 taattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaac 361  Q
     ||  | |||||||||  |||| ||||||||||| |||||||| |||||| ||||||||||||| |||| | |||||  |||||||||||||| ||||||    
T  2197617 -aagcacaagtgtgtgcgaggaaggataatattagtaaaatggggagtgaagttagcatcggtttggttgatcggtttcttggatctcaaaatgaaaaac 2197715  T
Q  362 caagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaacca 421  Q
    | |||||| |||||||| || ||  ||||| || |||| | ||||||| |||||||||||    
T  2197716 cgagaacccaatcaaacaaggtcgatttagattggttcagatcggtttagaaccgaacca 2197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 90 - 238
Target Start/End: Original strand, 39571569 - 39571722
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactg-cagctagagttc----ttagtagaaacaaaatagactac 184  Q
    ||||||| |||||||||||||||||| | ||||||| ||| |||   ||||||||||||| | ||||| ||||    |||||| |||| ||||||| ||     
T  39571569 aaactaacaagagatggacgatcccaacggcgatgaggaatgattgtttaggtgtgactgacggctagcgttcttttttagtataaacgaaatagattat 39571668  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtatttt 238  Q
    |||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  39571669 gagtgatgagatgagatgatgataggagaaagtgaatgaattcaggagtatttt 39571722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 49124520 - 49124440
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt 278  Q
    |||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  49124520 agatgatgatgggagaaagtgaatgaactaaggagtaatttatgttggactttaattttgagcttaatgataagtgtgtgt 49124440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 198 - 303
Target Start/End: Original strand, 2501933 - 2502038
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattact 297  Q
    |||||||||| | |||||| |||||||||| | |||||||||||||| ||| ||||||| |||||||| |||||||||| | |||||||||||||| |||    
T  2501933 agatgatgatgggagaaagggaatgaattatgaagtattttatgttgcactgtaatttttagcttaatcataagtgtgtatgaggagggataatatcact 2502032  T
Q  298 aaaatg 303  Q
    ||||||    
T  2502033 aaaatg 2502038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 211 - 360
Target Start/End: Original strand, 12012836 - 12012984
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    |||||||||||||||||  |||||||| ||||||  |||||||||| | |||||| |||| ||||| | |||||||||||| |||||||||||  | |||    
T  12012836 agaaagtgaatgaattatagagtatttaatgttgacctttaattttaaacttaatcataaatgtgtat-aggagggataatcttactaaaatgaggggtg 12012934  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaa 360  Q
    | ||||||| |||||||||| | |||||| |||||| | |||||||||||    
T  12012935 aggttagcaccggttcggtttatcggttctttggattttaaaattaaaaa 12012984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 185 - 426
Target Start/End: Original strand, 27226783 - 27227013
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    ||||||| |||| ||||||||||   ||||| | |||| ||| | ||||| ||||||||||   ||||||||  || |||| ||||||||||   |||||    
T  27226783 gagtgattagatgagatgatgatgagagaaa-tcaatggattcaagagtactttatgttgggacttaattttaggcctaatcataagtgtgtt--aggag 27226879  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    ||||||||||| |||||||||||||||  ||| ||||||||        |||||| || ||||| ||||||||||||||||||||||| ||||| || ||    
T  27226880 ggataatattagtaaaatggagagtgagattaccatcggtt--------cggttccttagatcttaaaattaaaaaccaagaaccgaaccaaacaaggtc 27226971  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
      ||||| || ||||||||||| ||||| || ||||| ||||    
T  27226972 ggtttagattggttcggttcggctttgatccaaaccagacaa 27227013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 162 - 278
Target Start/End: Complemental strand, 45595681 - 45595569
Alignment:
Q  162 ttagtagaaacaaaatagactacgag---tgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttga 258  Q
    ||||||||||||||||||| |  |||   |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||       ||||||||||    
T  45595681 ttagtagaaacaaaatagaatgtgagggatgatgagataagatgatgataggagaaagtgaataaatcaaggagtattttatg-------ttaattttga 45595589  T
Q  259 gcttaattataagtgtgtgt 278  Q
    ||||||| | ||||||||||    
T  45595588 gcttaatcacaagtgtgtgt 45595569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 341 - 426
Target Start/End: Complemental strand, 2923114 - 2923029
Alignment:
Q  341 ttggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    |||||||||||||| ||||| ||||||||||||||||| || ||  | ||| || |||||||||||||||||||||||||| ||||    
T  2923114 ttggatctcaaaatgaaaaatcaagaaccgaatcaaacaaggtcggtgtagattggttcggttcggttttgaaccgaaccatacaa 2923029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 162 - 420
Target Start/End: Original strand, 46265154 - 46265407
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    ||||||||||  ||||||| |  |||||||||||| ||||||| ||||   ||||| ||   |||||| ||||||||||||  | | ||||||||| ||     
T  46265154 ttagtagaaatgaaatagagtttgagtgatgagatgagatgataatag---aaagtaaactgattaagtagtattttatgtatggcattaattttgggca 46265250  T
Q  262 taattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaac 361  Q
    |||| |||||||||||  |||| ||| |||| || |||||||  |||||  |||| ||| | || |||||| |||||  |||||||||||||| | ||||    
T  46265251 taatcataagtgtgtg--aggaaggacaataatagtaaaatgaggagtggagttaacattgatttggttcatcggtttcttggatctcaaaatgacaaac 46265348  T
Q  362 caagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaacc 420  Q
      | |||| || ||||| |||||  ||||| ||  ||||||||||||||||||||||||    
T  46265349 tgaaaaccaaaccaaacaagatcggtttagattgattcggttcggttttgaaccgaacc 46265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 2923179 - 2923125
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaat 265  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  2923179 agaaagtgaatgaattaagtagttttttatgttggactttaattttgagcctaat 2923125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 211 - 385
Target Start/End: Complemental strand, 46993539 - 46993365
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    ||||| |||||| |||||  ||||||||||||||||||||||||||| ||||||   ||||| ||||| |||   |||||||||| ||||||   |||||    
T  46993539 agaaattgaatggattaaaaagtattttatgttggactttaattttgggcttaaccttaagtttgtgtgaggtacgataatattagtaaaataaggagtg 46993440  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatca 385  Q
      |||| |||||| | |||| | |||||    ||||||| |||| |||||||| ||||| || ||||||||||||    
T  46993439 tggttatcatcggattggttaatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaactagatca 46993365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 198 - 413
Target Start/End: Original strand, 21378445 - 21378660
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatg-ttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattac 296  Q
    |||||||||| | ||||||| |||| |||||| | ||||||| | ||||||||||| |||  || |||   ||| |||| || |||||||||  |||||     
T  21378445 agatgatgatcggagaaagtaaatggattaagaattattttacgattggactttaaatttaggcctaaacgtaaatgtgggtgaggagggatgctattaa 21378544  T
Q  297 taaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttg 396  Q
    ||||||| |   ||  ||||  |||| ||||||||| |||||| ||| |||||||||| ||||||  ||||||||| |||||||| ||| ||| ||||      
T  21378545 taaaatgaacgatgtggttattatcgattcggttcatcggttctttgaatctcaaaat-aaaaactgagaaccgaaccaaactaggtcaatttcggttga 21378643  T
Q  397 ttcggttcggttttgaa 413  Q
    |||||||||||||||||    
T  21378644 ttcggttcggttttgaa 21378660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 362
Target Start/End: Original strand, 19602226 - 19602357
Alignment:
Q  231 agtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggtt 330  Q
    |||||||||||||||  ||||| |||  || |||| |||||| ||||| ||||| || ||||||| ||| |||   ||||| ||||||||| ||||| ||    
T  19602226 agtattttatgttgggatttaactttaggcataatcataagtttgtgtgaggagagaaaatattagtaatatgagaagtgaggttagcatctgttcgatt 19602325  T
Q  331 caccggttcattggatctcaaaattaaaaacc 362  Q
    || | |||| |||||||||||||| |||||||    
T  19602326 catctgttctttggatctcaaaataaaaaacc 19602357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 325 - 423
Target Start/End: Original strand, 22331986 - 22332084
Alignment:
Q  325 tcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaa 423  Q
    |||||||| |||||| |||||||||||||||||||||| | || ||||  ||||||||||  |||||||  ||| |||| |||||  ||||||||||||    
T  22331986 tcggttcatcggttctttggatctcaaaattaaaaaccgaaaatcgaacaaaactagatcgatttaggtcggtttggtttggtttcaaaccgaaccaaa 22332084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 48638208 - 48638265
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattt 255  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||| ||||||||||    
T  48638208 agatgatgaaggaagaaagtgaatgaattaaagagtattttatgttgaactttaattt 48638265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 494
Target Start/End: Complemental strand, 1194622 - 1194445
Alignment:
Q  316 agcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaacc 415  Q
    |||||| |||||||||| |||||  || ||||||||||| ||| ||| ||||||||| |||| ||||||  |||||||   || | ||||||||| |||     
T  1194622 agcatcagttcggttcatcggttt-ttagatctcaaaataaaacaccgagaaccgaaccaaattagatcggtttaggtcaatttgattcggttttaaact 1194524  T
Q  416 gaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||||| |||| | | |||||| || ||||| |   |||||| ||| |||||||  | | ||||||||||||||||||    
T  1194523 gaaccaagcaaagtcaaatacttctttggtttgggttggtttggattctcagtttagttggttttgtctgaaccactta 1194445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 45595546 - 45595477
Alignment:
Q  287 ataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaatta 356  Q
    |||||||||||||||||| |||||||||||||||| ||||| || | ||| |  ||| ||||||||||||    
T  45595546 ataatattactaaaatggggagtgatgttagcatcagttcgatttatcggatatttgaatctcaaaatta 45595477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 426
Target Start/End: Complemental strand, 7995102 - 7995021
Alignment:
Q  345 atctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    |||||||||| |||||||| ||||| || |||||||||||  |||   || |||||| ||| |||| |||||||||||||||    
T  7995102 atctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcaattggttcggatcgattttcaaccgaaccaaacaa 7995021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 9e-87; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 90 - 447
Target Start/End: Complemental strand, 37630743 - 37630385
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatga---gttaggtgtgactgcag-ctagagttctt----agtagaaacaaaatagac 181  Q
    ||||||| |||||||| ||||||||| ||||||||| |||||||||   |||| |||||||||  | |||| ||||||    ||||||||||||||||||    
T  37630743 aaactaacaagagatgaacgatcccaacagcgatgaggaacgatgatgggttatgtgtgactggtggctagtgttcttttttagtagaaacaaaatagac 37630644  T
Q  182 tacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcag 281  Q
    |  |||||||||||   |||||||| ||   ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||  ||    
T  37630643 tttgagtgatgagac--gatgatgagag---aaagtgaatgaattaagaagtatttgatgttggactttaattttgagcttaatcataagtgtgtg--ag 37630551  T
Q  282 gagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactag 381  Q
    ||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  37630550 gagggataatattactaaagtggggagtgatgttagcatccattcggttcaccggttcattggatctcaaaattaaaaaccgagaactgaaccaaactag 37630451  T
Q  382 atcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    |||| |||||||| ||| || ||| ||||||||| |||||| |||  || ||||||||||||||||    
T  37630450 atcagtttaggttggtttggatcgattttgaaccaaaccaagcaaggttcgatactttttcggttt 37630385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 198 - 494
Target Start/End: Original strand, 29109044 - 29109340
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattact 297  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  29109044 agatgatgataggagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataattgtgtgtgaggggggataatattact 29109143  T
Q  298 aaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgt 397  Q
    |||||||  ||  | |||||||||| || |||||| |||||| |||||||||||||||||||||| |||||| || ||||||||||   ||||||||  |    
T  29109144 aaaatgggaaggaaggttagcatcgatttggttcatcggttctttggatctcaaaattaaaaaccgagaaccaaaccaaactagattggtttaggttgct 29109243  T
Q  398 tcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||||||||||||||| |||||||||||  |  |||| |||||| |||| |  ||||||| |||||||||||||||  ||||||| ||||||||||    
T  29109244 tcggttcggttttgaactgaaccaaacaaggtcggataatttttcagtttggttcggtttggattttcagtttcatcagttttgtccgaaccactta 29109340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 189 - 447
Target Start/End: Complemental strand, 5526529 - 5526272
Alignment:
Q  189 gatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggat 288  Q
    ||||||||  |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  5526529 gatgagatgtgatgatgatgacagaaagtgaatgaattaaggagtattttatgttggactttaattttgagtttaatcataagtgtgtgtaaggagggat 5526430  T
Q  289 aatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattt 388  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||| | |||| |||||||||||||||||||||  ||||||||| |||||||||||  ||    
T  5526429 aataatactaaaatggggagtgagattagcatcggttcggttcatctgttctttggatctcaaaattaaaaactgagaaccgaaccaaactagatcggtt 5526330  T
Q  389 taggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    |||||| |||| |||| |||||||||||||| ||||||  |  ||||| ||||||||||    
T  5526329 taggttggttc-gttcagttttgaaccgaacaaaacaaggtcggatacgttttcggttt 5526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 221 - 422
Target Start/End: Complemental strand, 27866889 - 27866691
Alignment:
Q  221 tgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcat 320  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||| ||||||||||||||||||| |||||| || | |||    
T  27866889 tgaattaaggagtattttatgttggactttaattttgagattaatcataagtgtgtg--aggagtgataatattactaaaatggtgagtgaggtaa-cat 27866793  T
Q  321 cggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaacc 420  Q
    |||||| ||||| |||||| | |||||||||||||||||||| |||| |||| |||||| ||||| |||| ||| |||| ||||||||||||||||||||    
T  27866792 cggttcagttcatcggttcttgggatctcaaaattaaaaaccgagaatcgaaccaaactcgatcaatttaagttggttcagttcggttttgaaccgaacc 27866693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 90 - 419
Target Start/End: Original strand, 3689877 - 3690200
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactgcag-ctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| |||||||||| ||||||| ||||||||| |||||||| |||||||||||| |  | | || ||||||    |||| |||| ||||| |||      
T  3689877 aaactaacaagagatggatgatcccatcagcgatgaggaacgatgtgttaggtgtgacggatggcaagtgttcttttttagtataaacgaaata-acttt 3689975  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt--cagg 282  Q
    |||||||||||| ||||||||||   ||||||||||||||    ||||||||||| ||||||||||||||||||||||||| ||||||||||||   |||    
T  3689976 gagtgatgagatgagatgatgatgagagaaagtgaatgaa----ggagtattttacgttggactttaattttgagcttaatcataagtgtgtgtgcgagg 3690071  T
Q  283 agggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactaga 382  Q
    |||||||||||||||||||||| |||| | ||||||||             ||||||||| ||||||||||||||||| | ||||||||| |||||||||    
T  3690072 agggataatattactaaaatggggagtaaggttagcat-------------cggttcattagatctcaaaattaaaaatcgagaaccgaaccaaactaga 3690158  T
Q  383 tcattttaggtttgttcg-----gttcggttttgaaccgaac 419  Q
    ||  |||||||| ||| |     |||||||||||||||||||    
T  3690159 tcggtttaggttggtttggtttagttcggttttgaaccgaac 3690200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 90 - 331
Target Start/End: Original strand, 33036811 - 33037052
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| || |||||||||||||||||| || ||||||| |||| ||||||||||||  || ||||| ||| ||    ||||||||||||||| | |      
T  33036811 aaactaacaaaagatggacgatcccagcaacggtgaagaatgatgggttaggtgtgaccagcggctagtgttattttttagtagaaacaaaataaagtgt 33036910  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
     |||||||||||     |||||| | ||||||  ||||||||| ||| |||| |||||||  ||||||||||||||||||| |||  ||||||| |||||    
T  33036911 aagtgatgagat-----gatgatgggagaaagcaaatgaattatggaatattatatgttgtcctttaattttgagcttaatcatagatgtgtgtgaggag 33037005  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttc 331  Q
    ||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  33037006 ggataatattactaaaatggagagtgaagttagcatcgattcagttc 33037052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 22848055 - 22848190
Alignment:
Q  164 agtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagctta 263  Q
    |||| |||||||||| | |  |||||||||||| |||||||||| | ||||||||||||||| | ||||||||||||||||| |||||| ||||||||||    
T  22848055 agtataaacaaaataaagtgtgagtgatgagatgagatgatgatgggagaaagtgaatgaataatggagtattttatgttggcctttaactttgagctta 22848154  T
Q  264 attataagtgtgtgtcaggagggataatattactaa 299  Q
    || |||||||||||| ||||||||||||||| ||||    
T  22848155 atcataagtgtgtgtgaggagggataatatttctaa 22848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 217 - 419
Target Start/End: Complemental strand, 38607254 - 38607049
Alignment:
Q  217 tgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgt----gtgtcaggagggataatattactaaaatggagagtgat 312  Q
    |||||| |||||  ||||||||||||||||||| ||||||| || |||| ||||||||    |||| ||||||||||| |||| |||||||| |||||      
T  38607254 tgaatggattaaatagtattttatgttggactt-aattttgggcctaatcataagtgtttgcgtgtgaggagggataacattagtaaaatggcgagtgtg 38607156  T
Q  313 gttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttga 412  Q
    |||||||||   |||||||| |||||   ||||||||||||| ||||||||||||||||| ||||| || ||| ||||| || |||||||||||||||||    
T  38607155 gttagcatcaaatcggttcatcggttttatggatctcaaaatgaaaaaccaagaaccgaaccaaacaaggtcagtttagattggttcggttcggttttga 38607056  T
Q  413 accgaac 419  Q
    | |||||    
T  38607055 atcgaac 38607049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 10722137 - 10722020
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaat--gaattaaggagtattttatgttggactttaattttgag 259  Q
    ||||||||||| ||||||||   |||| ||||||| |||||||||| | |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  10722137 ttagtagaaacgaaatagaccgtgagtaatgagatgagatgatgatgggagaaagtgaatatgaattaaggagtattttatgttggactttaattttgag 10722038  T
Q  260 cttaattataagtgtgtg 277  Q
    |||||| |||||||||||    
T  10722037 cttaatcataagtgtgtg 10722020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 306 - 427
Target Start/End: Original strand, 3919845 - 3919966
Alignment:
Q  306 gagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcg 405  Q
    |||||| |||||||||||||||||||| |||||| || |||||||||||||||||  ||||||| || |||||||||||  ||||| || ||||||||||    
T  3919845 gagtgaagttagcatcggttcggttcatcggttctttagatctcaaaattaaaaattaagaaccaaaccaaactagatcggtttagtttggttcggttcg 3919944  T
Q  406 gttttgaaccgaaccaaacaaa 427  Q
    |||||||||| |||||||||||    
T  3919945 gttttgaaccaaaccaaacaaa 3919966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 211 - 448
Target Start/End: Original strand, 44018838 - 44019069
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    |||||| ||| |||||||| | |||||||||||||||||||||||||| |||| | |||||||||||  |||| | ||||||||  |||||| |||| |     
T  44018838 agaaagcgaacgaattaagaaatattttatgttggactttaattttgaacttattcataagtgtgtgcaaggaagaataatattgttaaaattgagaata 44018937  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggtttt 410  Q
    | |||||||  ||||||||||| | |||  ||||||||||||||||||| || ||||||||| ||||||| |||  |||| |||     |||||||||||    
T  44018938 aggttagca-gggttcggttcatcagttttttggatctcaaaattaaaatccgagaaccgaaccaaactaaatcggtttaagtt-----ggttcggtttt 44019031  T
Q  411 gaaccgaaccaaacaaaattagatactttttcggttta 448  Q
    ||||| ||||||||||| |   ||||||||| ||||||    
T  44019032 gaaccaaaccaaacaaagtccaatacttttttggttta 44019069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 162 - 278
Target Start/End: Original strand, 30906686 - 30906802
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    ||||||||||| ||||||| |  ||||||||| ||  ||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30906686 ttagtagaaacgaaatagagtgtgagtgatgaaatgggatgatgatggacgaaagtgaatgaattaaggagtattttatgttgaactttaattttgagct 30906785  T
Q  262 taattataagtgtgtgt 278  Q
    |||| |||| |||||||    
T  30906786 taatcataactgtgtgt 30906802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 285 - 426
Target Start/End: Complemental strand, 4240877 - 4240735
Alignment:
Q  285 ggataatattactaaaatggag-agtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagat 383  Q
    |||||||||||||||||  ||| ||| ||||||||||||||| |||| | ||| || |||||||||||||||||||  |||||||| ||  |||||| ||    
T  4240877 ggataatattactaaaaatgaggagtaatgttagcatcggtttggtttatcggatctttggatctcaaaattaaaattcaagaaccaaactaaactatat 4240778  T
Q  384 cattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    |  ||| |||| |||||||||| |||||||  |||||||||||    
T  4240777 cgattttggttggttcggttcgattttgaatggaaccaaacaa 4240735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 361
Target Start/End: Complemental strand, 30340681 - 30340512
Alignment:
Q  190 atgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggata 289  Q
    |||||||  |||||| || | ||||||||||||||| || ||||||||||||||| |||||||||||  |  |||| |||||||||||  ||||||||||    
T  30340681 atgagatgtgatgataatgggagaaagtgaatgaataaaagagtattttatgttgaactttaattttaggtctaatcataagtgtgtg--aggagggata 30340584  T
Q  290 atattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaac 361  Q
    |||||| |||||| | |||||  |||| | | ||||| ||||| || ||  ||| |||||||||| ||||||    
T  30340583 atattagtaaaatagggagtggagttaccgttggttcagttcatcgatttcttgaatctcaaaatgaaaaac 30340512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 494
Target Start/End: Original strand, 35961755 - 35961914
Alignment:
Q  335 ggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagat 434  Q
    ||||| || ||||||||||| ||||||  |||||||||||||| ||||||  || ||||| ||||  |||| ||||||||| ||| ||||||  |   ||    
T  35961755 ggttctttagatctcaaaatcaaaaactgagaaccgaatcaaattagatcgattaaggttggttcaattcgattttgaaccaaacaaaacaaggtagaat 35961854  T
Q  435 actttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||||||  ||| |  |||||| ||||||||||| ||||||||||||||||||| ||||    
T  35961855 actttttcaatttggttcggtttaaattttcagttacatcgattttgtctgaaccgctta 35961914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 28199881 - 28199803
Alignment:
Q  199 gatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtg 277  Q
    ||||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||  || |||| |||||||||||    
T  28199881 gatgatgatgggagaaagtgaatggattaaggagtattatatgttggactttaattttaggcctaatcataagtgtgtg 28199803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 380
Target Start/End: Original strand, 30906822 - 30906921
Alignment:
Q  280 aggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaact 379  Q
    |||| ||||||||||||||||||||  ||||| |||| ||||| ||| ||| |  ||||| ||||||||||||||| ||| || ||||||||||||||||    
T  30906822 aggaaggataatattactaaaatgggaagtgaggttaccatcgattcagtttattggttctttggatctcaaaatt-aaatccgagaaccgaatcaaact 30906920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3919746 - 3919812
Alignment:
Q  188 tgatgagataagatgatgatagtagaaagtgaat-gaattaaggagtattttatgttggactttaat 253  Q
    |||||||||||||| ||||||| |||||||||||  |||||| ||||||||||| ||||||||||||    
T  3919746 tgatgagataagattatgataggagaaagtgaataaaattaaagagtattttatattggactttaat 3919812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 4241028 - 4240920
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    |||||||||||||||||||    ||| |||||||| |||||||||||| ||||||||   || || ||||||||||||||||| || |||||| ||||||    
T  4241028 ttagtagaaacaaaatagagcgtgagagatgagatgagatgatgataggagaaagtg---gatttgaggagtattttatgttgaac-ttaattatgagct 4240933  T
Q  262 taattataagtgt 274  Q
    |||| | ||||||    
T  4240932 taatcacaagtgt 4240920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 418
Target Start/End: Original strand, 7772058 - 7772163
Alignment:
Q  313 gttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttga 412  Q
    |||||||||| |||  |||| |||||| ||  |||| ||||| ||||||||| ||||||| |||||||||||  ||||| || |||||||||| |||| |    
T  7772058 gttagcatcgattcaattcatcggttctttcaatctgaaaatcaaaaaccaaaaaccgaaccaaactagatcggtttagcttggttcggttcgattttaa 7772157  T
Q  413 accgaa 418  Q
    ||||||    
T  7772158 accgaa 7772163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 415
Target Start/End: Complemental strand, 32296814 - 32296688
Alignment:
Q  288 taatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcatt 387  Q
    |||||||| |||||| |||||||  |||| |||| ||||  |||| ||||| |||||||||  |||| ||||| | |||||||| ||| ||||||||  |    
T  32296814 taatattagtaaaatagagagtggagttatcatcagttcaattcatcggtttattggatcttgaaatgaaaaatcgagaaccga-tcatactagatcggt 32296716  T
Q  388 ttaggtttgttcggttcggttttgaacc 415  Q
    |||| ||  |||||||||||||||||||    
T  32296715 ttagattgattcggttcggttttgaacc 32296688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 10722008 - 10721965
Alignment:
Q  335 ggttcattggatctcaaaattaaaaaccaagaaccgaatcaaac 378  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||    
T  10722008 ggttcattagatctcaaaattaaaaaccgagaaccgaaccaaac 10721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 494
Target Start/End: Original strand, 35954770 - 35954923
Alignment:
Q  341 ttggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttt 440  Q
    |||||||||||||| ||||||  |||||| || |||| ||||||   ||||||| |||| ||||| |||| |||| ||| ||||||  |  |||||||||    
T  35954770 ttggatctcaaaatcaaaaactgagaaccaaaccaaattagatcgagttaggttggttcagttcgattttaaaccaaacaaaacaaggtcggatactttt 35954869  T
Q  441 tcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||| |||    |||||| ||||||  ||| | |||||||||| |||||| ||||    
T  35954870 tcgatttgattcggtttaaatttttggttacgtcgattttgtttgaaccgctta 35954923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 41068648 - 41068732
Alignment:
Q  168 gaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaa 252  Q
    |||| |||||||| |  |||||||||||||| |||  ||| | |||| || |||| || || |||||||||||||||||||||||    
T  41068648 gaaataaaatagagtttgagtgatgagataaaatggagatggaagaaggtaaatgtatcaatgagtattttatgttggactttaa 41068732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 90 - 447
Target Start/End: Original strand, 3767429 - 3767787
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactgcag-ctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| |||||||||||||||||||  ||||||| |||||||| |||||||||||||| || |||| ||||||    |||  |||  ||||| |||      
T  3767429 aaactaacaagagatggacgatcccagtggcgatgaggaacgatgggttaggtgtgactgaaggctagtgttcttttttagtttaaatgaaatacact-- 3767526  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| ||||||| || | |||||||||||| ||||||||  |||||||||||||||||||||||||| ||||| ||| |||||||| || ||    
T  3767527 gagtgatgagatgagatgat-atgggagaaagtgaatggattaaggataattttatgttggactttaattttgagtttaatcata-gtgtgtgtgagaag 3767624  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| || |||||||||||    
T  3767625 ggataatattactaaaatggggagtgaggttagcatcggttcggttcatcggttcattggatctcaaaataaaaaaccgagaaccaaaccaaactagatc 3767724  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
      ||||| || |||||||||||||||||||||||| ||||||  |  ||||||||||||||||    
T  3767725 ggtttagattggttcggttcggttttgaaccgaactaaacaaggtcggatactttttcggttt 3767787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 165 - 483
Target Start/End: Original strand, 16570711 - 16571028
Alignment:
Q  165 gtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaa 264  Q
    ||||||||| |||||| |  |||||| ||||| |||||||||| | |||||||||| ||||||||||||||||||| ||| | |||||||||||| ||||    
T  16570711 gtagaaacagaatagagtgtgagtgacgagatgagatgatgatggcagaaagtgaacgaattaaggagtattttatattgtattttaattttgagtttaa 16570810  T
Q  265 ttataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaa 364  Q
    | |||| ||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||| ||||| |||||| |||||||||||||||||||| | |    
T  16570811 tcataaatgtgtgtgaggagggataataatactaaaatggggagtgaagttagcatcggttcagttcatcggttctttggatctcaaaattaaaaatcga 16570910  T
Q  365 gaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaatttt 464  Q
    ||||| || |||| ||||||  |||||||| ||| |||||||||||||||| ||||||||||  || |||| ||||| ||||| |  |||||||||||||    
T  16570911 gaacctaaccaaattagatcggtttaggttggtttggttcggttttgaaccaaaccaaacaaggttggata-ttttttggtttggttcggtttgaatttt 16571009  T
Q  465 cagtttcatcgattttgtc 483  Q
       |||||||| |||||||    
T  16571010 tgatttcatcggttttgtc 16571028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 174 - 447
Target Start/End: Complemental strand, 32322128 - 32321854
Alignment:
Q  174 aaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagctt-aattataagt 272  Q
    |||||||||  ||||||||| || |||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||||| || ||| ||||||    
T  32322128 aaatagactgtgagtgatgacatgagatgatgatgggagaaagtaaatgaattaaggagtattttatgttggactttaatcttgagttttaatcataagt 32322029  T
Q  273 gtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaa 372  Q
    |||||| ||||| |||||||||||||||||||||||||| |||||||| |||| |||| | |||||||||| |||| ||||||||||||| |||||||||    
T  32322028 gtgtgtgaggagagataatattactaaaatggagagtgaggttagcattggtttggtttatcggttcattgaatcttaaaattaaaaaccgagaaccgaa 32321929  T
Q  373 tcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
     |||| ||||||  |||| |||  ||||||| | |||| |||||||||||||||  |   |||||||||||||||    
T  32321928 ccaaattagatcggtttatgttgattcggtttgtttttaaaccgaaccaaacaaggtcgaatactttttcggttt 32321854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 185 - 426
Target Start/End: Original strand, 25456001 - 25456242
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| | |||||||||| |||||||||||| |||||| |||| |||||| ||| ||||||||||| || || | |||||||||||| | |||    
T  25456001 gagtgatgagatgatatgatgatagaagaaagtgaatggattaagtagtactttatgctgggctttaattttgggcatactcataagtgtgtgtgaagag 25456100  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||| || |||||||| |||||| ||||||||| ||||| |||| ||||| ||||||||||||||| ||||||| | |||| || ||||| ||||     
T  25456101 ggataataatagtaaaatggggagtgaggttagcatcagttcgattcatcggtttattggatctcaaaatgaaaaaccgataaccaaaccaaacaagatt 25456200  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
      ||||| ||  |||||||||||||||||| |||||| ||||    
T  25456201 ggtttagattgattcggttcggttttgaactgaaccagacaa 25456242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 162 - 403
Target Start/End: Complemental strand, 9040752 - 9040511
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    ||||||||||  ||||||| |  |||||||||||| ||||||| || | ||||||||||||||||||| |||||||||| |||  ||||||||||||||     
T  9040752 ttagtagaaatgaaatagagtctgagtgatgagatgagatgataatgggagaaagtgaatgaattaagtagtattttatcttgagctttaattttgagcc 9040653  T
Q  262 taattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaac 361  Q
    |||| |||||||||||| ||||||||||||| || ||||||||  ||||  |||||||||   |||||||| |||||  || ||||||||||| ||||||    
T  9040652 taatcataagtgtgtgtgaggagggataataatagtaaaatgggaagtggggttagcatcaactcggttcatcggtttcttagatctcaaaatgaaaaac 9040553  T
Q  362 caagaaccgaatcaaactagatcattttaggtttgttcggtt 403  Q
    | |||||| || ||||| |||||  ||||| || ||||||||    
T  9040552 cgagaaccaaaccaaacaagatcggtttagattggttcggtt 9040511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 200 - 504
Target Start/End: Complemental strand, 9505332 - 9505013
Alignment:
Q  200 atgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataa--------------gtgtgtgtcaggagg 285  Q
    |||||||| | |||||||||||||||||||||||||  ||||||| |||||||||||||||||||| | ||              |||||||| |||| |    
T  9505332 atgatgatgggagaaagtgaatgaattaaggagtatcatatgttgaactttaattttgagcttaatcacaaatatgtgtgtgtgtgtgtgtgtgaggaag 9505233  T
Q  286 gataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatca 385  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||| | |||||  |||||| |||||||||||| || ||||||||| ||||||| |||     
T  9505232 gataatattactaaaatggggagtgaggttggcatcggttcggtttatcggtttgttggatttcaaaattaaaatcctagaaccgaaccaaactatatcg 9505133  T
Q  386 ttttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagata-ctttttcggtttagaacggtttgaattttcagtttcatcgattttgtct 484  Q
     ||| |||| |||||||||| ||||||| ||||||||||||  || ||||  ||||||| ||| |   |||||| |||||| ||||||||| |||| ||     
T  9505132 gttttggttggttcggttcgattttgaatcgaaccaaacaaggttggatatttttttcgttttggttaggtttggattttcggtttcatcggttttatcc 9505033  T
Q  485 gaaccacttatgcccctaat 504  Q
     |||||||||  ||||||||    
T  9505032 aaaccacttacacccctaat 9505013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 372
Target Start/End: Original strand, 37379905 - 37380089
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| |||||||||| | | |||||||||| |||||| || |||||||||| | |||||||||||||  |||  |||||  ||||  |||||    
T  37379905 gagtgatgagatgagatgatgatggaa-aaagtgaatggattaagaagcattttatgttaggctttaattttgagtctaaccataagaatgtg--aggag 37380001  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaa 372  Q
     |||||||||| ||||||||||||||  |||| ||| ||||||||||||| |||| || ||||||||||| ||||||  |||||||||    
T  37380002 tgataatattagtaaaatggagagtggggttaccattggttcggttcacccgttcgttagatctcaaaatgaaaaactgagaaccgaa 37380089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 185 - 367
Target Start/End: Original strand, 25808154 - 25808336
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| |||||| ||| | |||||||||||| |||||| |||| ||||||   | ||||||||||  || || | |||||||||||| | |||    
T  25808154 gagtgatgagattagatgacgatgggagaaagtgaatggattaagtagtactttatgcacggctttaattttaggcatactcataagtgtgtgtgaagag 25808253  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaa 367  Q
    |||||||| || |||||||  |||||| ||||||||||||||| |||| || ||  |||||||||||||| ||||||| ||||    
T  25808254 ggataataatattaaaatgaggagtgaggttagcatcggttcgattcatcgatttcttggatctcaaaatgaaaaaccgagaa 25808336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 343 - 441
Target Start/End: Original strand, 34760833 - 34760931
Alignment:
Q  343 ggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatacttttt 441  Q
    |||||||||||| |||||||||||||| || |||||||||||  |||||||| |||||||||| |||||||||||||||||||| || |||||||||||    
T  34760833 ggatctcaaaatcaaaaaccaagaaccaaaccaaactagatcggtttaggttggttcggttcgattttgaaccgaaccaaacaagatcagatacttttt 34760931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 3555287 - 3555394
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| |||| |||||   ||||||||||||| |||| ||||||||||||||| ||||||||||| |||| ||| || ||||||||  |||||    
T  3555287 gagtgatgagatgagataatgatgagagaaagtgaatga-ttaatgagtattttatgttgaactttaattttaagctaaatcat-agtgtgtgggaggag 3555384  T
Q  285 ggataatatt 294  Q
    ||||||||||    
T  3555385 ggataatatt 3555394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 42141379 - 42141330
Alignment:
Q  43 aatcggaaactaagaagagaaagaggaagaacgaggttaatgttgagaaa 92  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42141379 aatcggaaactaagaagagaaagaggaagaacgaggttaaggttgagaaa 42141330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 278
Target Start/End: Original strand, 20860149 - 20860342
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactg-cagctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| | |||||||||||||||||| | ||||| |||||||| |||||||   |||| | ||||| ||||||    |||| |||  ||||||| |      
T  20860149 aaactaacacgagatggacgatcccagcggagatgaggaacgatgggttaggttaaactgacggctagtgttcttttttagtataaaagaaatagagtgt 20860248  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt 278  Q
    | ||||| |||| ||| ||||||   |||||||||||  |||||||||||||||||||| ||||||||||||||  |||||  |||||||||||    
T  20860249 gggtgattagatgagacgatgatgagagaaagtgaatagattaaggagtattttatgttcgactttaattttgattttaatcttaagtgtgtgt 20860342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 25343981 - 25344074
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt 278  Q
    ||||||||| || |||||||||| | |||||||||||| |||||| |||| |||||||||| ||||||||||  || || | ||||||||||||    
T  25343981 gagtgatgacatgagatgatgatgggagaaagtgaatggattaagtagtactttatgttgggctttaattttttgcatactcataagtgtgtgt 25344074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 271 - 385
Target Start/End: Original strand, 25344087 - 25344201
Alignment:
Q  271 gtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccg 370  Q
    |||||||| | ||||||||||| || |||||||  |||||| ||||||||||||| | |||| | |||  ||| |||||||||| ||||||  ||||||     
T  25344087 gtgtgtgtgaagagggataatagtagtaaaatgaggagtgaggttagcatcggttagattcatctgtttcttgaatctcaaaatgaaaaactgagaacca 25344186  T
Q  371 aatcaaactagatca 385  Q
    |||||||| ||||||    
T  25344187 aatcaaacaagatca 25344201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 20860358 - 20860415
Alignment:
Q  268 taagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggtt 325  Q
    ||||||||||| ||||| ||||||||||||||||||  ||||||  ||||||||||||    
T  20860358 taagtgtgtgtgaggagtgataatattactaaaatgaggagtgagattagcatcggtt 20860415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 40434868 - 40434948
Alignment:
Q  230 gagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    ||||||||||||||||  ||| ||||| ||| |||| |||| ||||| | ||||| |||||| ||| ||||||| ||||||    
T  40434868 gagtattttatgttgggatttcattttaagcctaatcataaatgtgtatgaggagagataatgttagtaaaatgaagagtg 40434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 1e-82; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 119 - 426
Target Start/End: Complemental strand, 11846628 - 11846316
Alignment:
Q  119 gcgatgaagaacgatgagttaggtgtgactg-cagctagagttc----ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtaga 213  Q
    |||||||  ||||||| |||||||||||||| | ||||| ||||    ||||||||||| ||||||||   ||| |||||||| |||||||||| | |||    
T  11846628 gcgatgagcaacgatgggttaggtgtgactgacggctagtgttcctttttagtagaaacgaaatagaccgtgagcgatgagatgagatgatgatggaaga 11846529  T
Q  214 aagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatg 313  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| |    
T  11846528 aagtggatgaattaaggagtattgtatgttggactttaattttgagcttaatcataagtgtgtgtgaggagggataatattactaaaatggggagtgagg 11846429  T
Q  314 ttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaa 413  Q
     |||||||  || ||||||  |||||||||||||||||||||||||||| ||||||||| |||||||||||  |||| ||| |||| |||||||||||||    
T  11846428 atagcatcaatttggttcattggttcattggatctcaaaattaaaaaccgagaaccgaaccaaactagatcggtttaagttggttcagttcggttttgaa 11846329  T
Q  414 ccgaaccaaacaa 426  Q
    || ||||||||||    
T  11846328 ccaaaccaaacaa 11846316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 162 - 423
Target Start/End: Complemental strand, 9827077 - 9826816
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    |||| |||||| |||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9827077 ttagaagaaacgaaatagactatgagtgatgagatgagatgatgatgggagaaagtgaatgaattaaggagtattttatgttggactttaatattgagct 9826978  T
Q  262 taattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaac 361  Q
    |||| ||||| |||||| |||||||||||||||||||||| ||  ||||| |||| |||| ||| |||||| |||||| |||||| ||||||||||||||    
T  9826977 taatcataagcgtgtgtgaggagggataatattactaaaacgggaagtgaggttaacatcagtttggttcatcggttctttggatttcaaaattaaaaac 9826878  T
Q  362 caagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaa 423  Q
    | |||| |||| |||||||||||  |||| ||| ||||||||||||||| ||||||||||||    
T  9826877 cgagaatcgaaccaaactagatcggtttatgttggttcggttcggttttcaaccgaaccaaa 9826816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 90 - 494
Target Start/End: Complemental strand, 23300832 - 23300433
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgact-gcagctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| |||||||||||||||||||   |||||| ||  |||| ||||||||||| | ||  |||| ||||||    ||| ||||| ||||||| |      
T  23300832 aaactaacaagagatggacgatcccagtgacgatgagga--gatgggttaggtgtgagtagcgactagtgttcttttatagtggaaacgaaatagaatgt 23300735  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| |||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| | |||||    
T  23300734 gagtgatgagatgagatgatgatgggaaaaagtgaaagaattaaggagtattttatgttggactttaattttgagtttaatcataagtgtgtatgaggag 23300635  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    ||||||||||||||||||||||||||| ||||||||||||||        ||||  |||||||||||||||||||||| |||||||||  ||||||||||    
T  23300634 ggataatattactaaaatggagagtgaagttagcatcggttc--------ggtttgttggatctcaaaattaaaaaccgagaaccgaactaaactagatc 23300543  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtct 484  Q
    | |||||||| ||||||||| |||||||||||||||||||||  |    | |||||||||||| |  |||||||||||||| |||||| |||| ||| |     
T  23300542 agtttaggttggttcggttcagttttgaaccgaaccaaacaaggtcgatttctttttcggtttggttcggtttgaattttcggtttcaacgatgttgccc 23300443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 164 - 494
Target Start/End: Original strand, 2453955 - 2454287
Alignment:
Q  164 agtagaaacaaaatagactacgagtgatgagataagat--gatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    ||||||||| ||||||| |  |||||||||||| ||||  |||||| | ||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  2453955 agtagaaacgaaatagagtgtgagtgatgagatgagatatgatgatgggagaaagtgaatgaattaagaaatattttatgttggactttaatcttgagct 2454054  T
Q  262 taattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaac 361  Q
    || | ||| |||| ||| ||||| ||||| ||||||||||||| |||||| | |||||||| |||||||    ||||| |||||||||||||||||||||    
T  2454055 tattcataggtgtttgtgaggagcgataagattactaaaatggggagtgaggctagcatcgattcggtttgttggttctttggatctcaaaattaaaaac 2454154  T
Q  362 caagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaat 461  Q
    |||||| |||| ||||||| |||| |||||||| |||||||||| |||||||||||||| || ||| |  |||||||| |||||||    |  |||||||    
T  2454155 caagaatcgaaccaaactatatcagtttaggttggttcggttcgattttgaaccgaacctaataaagtcggatactttctcggtttgattccatttgaat 2454254  T
Q  462 tttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||| |||||||| ||||||| ||||||||||    
T  2454255 tttcaatttcatcggttttgtccgaaccactta 2454287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 189 - 384
Target Start/End: Complemental strand, 11971723 - 11971528
Alignment:
Q  189 gatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggat 288  Q
    |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  11971723 gatgagatgagatgatgatggaagaaagtggatgaattaaggagtattttatgttggactttaattttgagattaatcataagtgtgtgtgaggagggat 11971624  T
Q  289 aatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||||||||||| |||||| | ||||||| ||| ||||||  | ||||||||||||| |||||||||||| ||||||||| ||||| |||||    
T  11971623 aatattactaaaatggggagtgaggatagcatcagtttggttcattgattcattggatctctaaattaaaaaccgagaaccgaaccaaacaagatc 11971528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 219 - 494
Target Start/End: Original strand, 7176390 - 7176657
Alignment:
Q  219 aatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagc 318  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||||||||||||||||| |||||| ||||||    
T  7176390 aatgaattaaggaatattttatgttggactttagttttgagcttaatcataagtgtttgtgaggagagataatattactaaaatggggagtgaggttagc 7176489  T
Q  319 atcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaa 418  Q
    ||| |||        ||||||||||||||||||||| ||||||  | ||||||| |||||||||||  |||||||| |||||||||| ||||||||| ||    
T  7176490 atctgtt--------cggttcattggatctcaaaataaaaaactgataaccgaaccaaactagatcggtttaggttggttcggttcgattttgaaccaaa 7176581  T
Q  419 ccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||||||  || ||||||||||||| || |  ||||| || ||||| ||||||||| ||||||| ||| ||||||    
T  7176582 ccaaacaaggttggatactttttcgggttggttcggttagagttttcggtttcatcggttttgtccgaaacactta 7176657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 248 - 447
Target Start/End: Original strand, 32613784 - 32613977
Alignment:
Q  248 tttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatc 347  Q
    |||||||||||||||||| |||||||||||| |||| | ||||||||| ||||||||  | ||| ||||||||||||| |||||| | |||| ||||| |    
T  32613784 tttaattttgagcttaatcataagtgtgtgtgaggatgaataatattattaaaatgggaactgaggttagcatcggtttggttcatcagttctttggaac 32613883  T
Q  348 tcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    |      |||||||||| ||  ||| |||||||||||  |||||||| |||||||||||||||||||| | ||||||||| | |||||||||||||||||    
T  32613884 t------taaaaaccaaaaatggaaccaaactagatcggtttaggttggttcggttcggttttgaaccaagccaaacaaagtcagatactttttcggttt 32613977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 23301573 - 23301487
Alignment:
Q  340 attggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  23301573 attggatctcaaaattaaaaactgagaaccgaaccaaactagatcagtttaggttggttcggttcggttttgaaccgaaccaaacaa 23301487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 198 - 447
Target Start/End: Original strand, 7551280 - 7551525
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattact 297  Q
    |||||||||  | |||||||||||| |||||| |||||||| ||| |   |||||||||| |  |||| |||||||||    |||||| ||||||||  |    
T  7551280 agatgatgacgggagaaagtgaatggattaagaagtattttttgtagtgatttaattttgggtctaatcataagtgtg----aggaggaataatatttgt 7551375  T
Q  298 aaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgt 397  Q
    |||||||||||||  |||| |||||||||| |||| || ||| ||| ||||| |||| ||||| ||||||||||  ||||| |   |  ||||| || ||    
T  7551376 aaaatggagagtggggttaccatcggttcgattcatcgtttccttgtatctcgaaatgaaaaatcaagaaccgacccaaacaaagccggtttagattggt 7551475  T
Q  398 tcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    |||||| |||||||| |||||||||||||  || ||||| ||||||||||    
T  7551476 tcggtttggttttgatccgaaccaaacaatgttggataccttttcggttt 7551525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 214 - 442
Target Start/End: Complemental strand, 23586143 - 23585913
Alignment:
Q  214 aagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgt--gtgtcaggagggataatattactaaaatggagagtga 311  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||| || || |||||  |||| | ||   || |||||| |||||||||||||||    
T  23586143 aagtgaatgaatgaaggagtattttacgttggactttaatttttagcttcatcatcagtgtatgtgtgatgaaaaatgatattaataaaatggagagtga 23586044  T
Q  312 tgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttg 411  Q
       ||| ||||||||  || | |  ||  ||| ||||||||||||||| || |||||| || ||||||| |||  |||| ||| ||| ||||||||||||    
T  23586043 gactagtatcggttcaatttatcaattttttgaatctcaaaattaaaatccgagaaccaaaccaaactatatcggtttacgttagtttggttcggttttg 23585944  T
Q  412 aaccgaaccaaacaaaattagatactttttc 442  Q
    |||||||| ||||||  |  |||||||||||    
T  23585943 aaccgaacaaaacaaggtcggatactttttc 23585913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 90 - 239
Target Start/End: Original strand, 26186474 - 26186629
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtg-tgac-tgcagctagagttctt----agtagaaacaaaatagacta 183  Q
    ||||||| |||||||||| ||||||| | ||||||| |||| ||| |||||||| || | ||||||||| ||||||    ||||||||||||||||| |     
T  26186474 aaactaacaagagatggatgatcccaacggcgatgaggaacaatgggttaggtggtggcatgcagctagtgttcttttttagtagaaacaaaatagagtg 26186573  T
Q  184 cgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtatttta 239  Q
     |||||||||||| ||||||||||   |||||||||||||||||| ||||||||||    
T  26186574 tgagtgatgagattagatgatgatgagagaaagtgaatgaattaaagagtatttta 26186629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 1208848 - 1208759
Alignment:
Q  212 gaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaa 301  Q
    |||||||||||||||||| ||||||||||| || |||||||||||| || |||| |||||||||||| | ||||||||| |||| |||||    
T  1208848 gaaagtgaatgaattaagtagtattttatgctgaactttaattttgggcctaatgataagtgtgtgtgaagagggataacattagtaaaa 1208759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 199 - 418
Target Start/End: Complemental strand, 26880074 - 26879863
Alignment:
Q  199 gatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattacta 298  Q
    ||||||||| | |||||||||||| ||||| |||||||||||||||  |||||||||||  | |||        || ||| |||||||||||||||| |     
T  26880074 gatgatgatgggagaaagtgaatggattaatgagtattttatgttgagctttaattttggacctaa--------gtatgtgaggagggataatattagtg 26879983  T
Q  299 aaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgtt 398  Q
    |||||  || ||  |||| ||||||||||||||| |||||| ||| |||||| ||| ||||||  |||||  || ||| | || ||| ||||  || |||    
T  26879982 aaatgaggaatggggttaccatcggttcggttcatcggttccttgaatctcacaatgaaaaactgagaactcaaccaaccaaggtcagtttatattggtt 26879883  T
Q  399 cggttcggttttgaaccgaa 418  Q
    ||||| | ||||||||||||    
T  26879882 cggtttgattttgaaccgaa 26879863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 20722575 - 20722498
Alignment:
Q  201 tgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt 278  Q
    ||||||| | |||||||||||| |||||| |||| |||||||||| |||||||||||  | |||| ||||||||||||    
T  20722575 tgatgatggcagaaagtgaatgcattaagaagtaatttatgttgggctttaattttggccctaatcataagtgtgtgt 20722498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 291 - 384
Target Start/End: Original strand, 26186656 - 26186749
Alignment:
Q  291 tattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||||||||| |||  | ||||| |||||||||  ||| |||||| |||||| | ||||||||||||| |||||| || |||||||||||    
T  26186656 tattactaaaatggggagcaaggttagaatcggttcgactcatcggttctttggattttaaaattaaaaaccgagaaccaaaccaaactagatc 26186749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 12263264 - 12263165
Alignment:
Q  225 ttaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggt 324  Q
    |||||||||||||||| |||| |||||||||||  | |||| |||||||| ||  |||||||||||| ||| ||||||||  ||||  |||| |||||||    
T  12263264 ttaaggagtattttatcttgggctttaattttggacataataataagtgtttg--aggagggataattttagtaaaatggttagtggagttaccatcggt 12263167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 5416339 - 5416283
Alignment:
Q  188 tgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttg 244  Q
    |||| |||| ||||||||||   |||||||||||||||||| || ||||||||||||    
T  5416339 tgattagatgagatgatgatgagagaaagtgaatgaattaaagactattttatgttg 5416283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 3e-80; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 211 - 494
Target Start/End: Original strand, 53393050 - 53393333
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    ||||||||||||||||| |||| |||||||||||  ||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||| ||||    
T  53393050 agaaagtgaatgaattatggagcattttatgttgacctttaattttgagcttaatcagaagtgtgtgtgaagagggataatattactaaaatggaaagtg 53393149  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggtttt 410  Q
    | |||||||||||||||||||| ||||||||||||| ||||| ||| ||||| ||||||||| |||||||||||  |||||||| ||||||||| |||||    
T  53393150 aggttagcatcggttcggttcatcggttcattggatttcaaagttataaaccgagaaccgaaccaaactagatcggtttaggttggttcggttcagtttt 53393249  T
Q  411 gaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
     |||||||||||||||  |  |||||||||| ||||| |  ||||||| |||||| ||||||||| ||||||| ||||||||||    
T  53393250 aaaccgaaccaaacaaggtcggatacttttttggtttggttcggtttggattttcggtttcatcggttttgtccgaaccactta 53393333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 185 - 423
Target Start/End: Complemental strand, 42141556 - 42141327
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||| ||||||| ||||||||||   ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  42141556 gagtaatgagatgagatgatgatgagagaaagtgaatca-ttaaggagtattttatgttggactttaattttgagattaatcataagtgtgtgtgaggag 42141458  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    | |||||||||||||||||  ||||||  ||||||||||||||        |||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  42141457 gtataatattactaaaatgaggagtgagtttagcatcggttcg--------gttctttggatctcaaaattaaaaaccaagaaccgaaccaaagtagatc 42141366  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaa 423  Q
      ||||||||||||| |||||||||||||||||||||||    
T  42141365 gatttaggtttgttcagttcggttttgaaccgaaccaaa 42141327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 8606003 - 8606263
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||| ||  |||||    
T  8606003 gagtgatgagatgaaatgatgataggagaaagtgaatgaattaaggagtattttatgttggactttaattttgggcctaataataagtgtatg--aggag 8606100  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
      || |||||| |||||||| |||||  |||| |||||||||| ||||  ||||| |||||||||||||| ||||||  ||||||||| ||| | |||||    
T  8606101 aaattatattagtaaaatggggagtgtggttaccatcggttcgattcattggttccttggatctcaaaatgaaaaactgagaaccgaaccaaccaagatc 8606200  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
      ||||| || ||||| || ||||||||||||| ||||||||| || ||||||||||||||||    
T  8606201 ggtttagattggttcgatttggttttgaaccgagccaaacaaagttggatactttttcggttt 8606263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 90 - 339
Target Start/End: Original strand, 19681838 - 19682092
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactg-cagctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||||||||||||||| ||| |||| | || || |||||||| |||||||| ||||| | ||||| ||||||    ||||||||| ||||||  |      
T  19681838 aaactaaaaagagatggacaatctcagcggtgacgaggaacgatgggttaggtgagactgacggctagtgttcttttttagtagaaacgaaatagtgtgt 19681937  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
     |||||| |||| |||||||||| | |||  |||||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||| ||| || ||    
T  19681938 aagtgattagatgagatgatgatgggagaccgtgaataaattaaggagtattttatgtttgactttaattttgagcttaatcgtaagtgtatgtgagaag 19682037  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttc 339  Q
    |||||||||||||||||||   ||||| ||||||||||||| |||||| ||||||    
T  19682038 ggataatattactaaaatgagaagtgaggttagcatcggtttggttcatcggttc 19682092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 211 - 447
Target Start/End: Original strand, 24466210 - 24466446
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||| |||  |||||| ||||| |||  ||||||||||| ||||||   |||||    
T  24466210 agaaagtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggataatattagtaaaataaggagtg 24466309  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggtttt 410  Q
      |||| |||||| | |||||| |||||    |||||||||||| |||||||| ||||| ||||||||||||||  |||   || |||||| |||||||     
T  24466310 tggttatcatcggattggttcatcggtttcacggatctcaaaatgaaaaaccatgaaccaaatcaaactagatcggtttcaattggttcggatcggtttc 24466409  T
Q  411 gaaccgaaccaaacaaaattagatactttttcggttt 447  Q
     ||||||||||||||| || ||||| |||||| ||||    
T  24466410 aaaccgaaccaaacaagatcagatattttttcagttt 24466446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 273
Target Start/End: Original strand, 13207258 - 13207347
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaa-ttttgagcttaattataagtg 273  Q
    |||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||||| |||||| ||||||||||||| |||||||    
T  13207258 gagtgatgagatgagatgatgatagaagaaagtgaatggattaatgagtattttatgttgggctttaatttttgagcttaatcataagtg 13207347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 189 - 302
Target Start/End: Original strand, 23107779 - 23107893
Alignment:
Q  189 gatgagat-aagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggaggga 287  Q
    |||||||| |||||||||||   |||||||||||| |||||  |||||||||||||||||||||||||||||| |||  |||||| ||||| |||  |||    
T  23107779 gatgagatgaagatgatgattagagaaagtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtagga 23107878  T
Q  288 taatattactaaaat 302  Q
    |||||||| ||||||    
T  23107879 taatattagtaaaat 23107893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 39838950 - 39839033
Alignment:
Q  243 tggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttc 326  Q
    ||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||  |  |||||| ||||||||||||||    
T  39838950 tggactttaatattgagcttaatcataagtgtgtgtgaggagagataatattactaaatcgaggagtgaggttagcatcggttc 39839033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 271 - 359
Target Start/End: Complemental strand, 8056942 - 8056854
Alignment:
Q  271 gtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaa 359  Q
    |||||||| |||| ||||||||||| |||||||| |||||  ||||| |||||||| ||||| |||||  |||||||||||||| ||||    
T  8056942 gtgtgtgtgaggaaggataatattagtaaaatggggagtggggttaggatcggttcagttcatcggtttcttggatctcaaaatgaaaa 8056854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 4413613 - 4413530
Alignment:
Q  343 ggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    ||||||| |||| |||||||| ||||| || |||||||||||  ||| | || |||||| |||||||| |||||||||||||||    
T  4413613 ggatctcgaaatgaaaaaccatgaaccaaagcaaactagatcggtttcgattggttcggatcggttttaaaccgaaccaaacaa 4413530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 13207448 - 13207507
Alignment:
Q  388 ttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    ||||||| |||| | |||  ||||||||||||||||||| || |||||||||||||||||    
T  13207448 ttaggttggttcagatcgactttgaaccgaaccaaacaagatcagatactttttcggttt 13207507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 55106720 - 55106666
Alignment:
Q  387 tttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatacttttt 441  Q
    |||||||| ||||| ||||||||| |||| |||| |||||||| |||||||||||    
T  55106720 tttaggttggttcgattcggttttaaaccaaacctaacaaaatcagatacttttt 55106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 2e-69; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 90 - 371
Target Start/End: Original strand, 32678226 - 32678511
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactgc-agctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| ||||||||||||||||| || |||||||  ||||||| ||||||||| || |  |||||| ||||||    ||||||||| ||||||||||     
T  32678226 aaactaataagagatggacgatccccgcggcgatgagaaacgatgggttaggtgtaacggatagctagtgttcttttttagtagaaacgaaatagactat 32678325  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| |||| |||||   ||||| ||||| |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||| | |||    
T  32678326 gagtgatgagatgagatcatgatgtgagaaaatgaataaattaacgagtattttatgttg-actttaattttgagtttaatcataagtgtgtgttatgag 32678424  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccga 371  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  32678425 ggataatattactaaaatggggagtgaggttagcatcagttcgattcatcggttcattggatctcaaaattaaaaaccgagaaccga 32678511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 162 - 426
Target Start/End: Complemental strand, 11911923 - 11911661
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttgg-actttaattttgagc 260  Q
    |||||| |||| ||||||| || |||||||||||  ||||||||   | |||||| |||| ||||||  ||||||||||||||| |||||||||||||||    
T  11911923 ttagtataaacgaaatagattatgagtgatgagacgagatgatg---ggagaaagcgaataaattaaacagtattttatgttgggactttaattttgagc 11911827  T
Q  261 ttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaa 360  Q
    ||||| ||||||||| || | |||||||||||||||| |||||| ||||||  |||| ||||||| |||||| |||||||| |||| |||||||||||||    
T  11911826 ttaatcataagtgtgcgtgatgagggataatattactcaaatggggagtgagtttagtatcggtttggttcatcggttcatcggatttcaaaattaaaaa 11911727  T
Q  361 ccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    ||||||||  ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  11911726 ccaagaactaaatcaaactagatcggtttaggttggttcggttcggttttgaaccgaaccaaacaa 11911661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 323 - 447
Target Start/End: Complemental strand, 513132 - 513008
Alignment:
Q  323 gttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaa 422  Q
    |||||||| | ||||| |||||||||||||||||||||  ||||| ||||||||||||||||  |||||||| |||||||| ||||||||||||||||||    
T  513132 gttcggtttatcggtttattggatctcaaaattaaaaattaagaatcgaatcaaactagatcggtttaggttggttcggtttggttttgaaccgaaccaa 513033  T
Q  423 acaaaattagatactttttcggttt 447  Q
    |||| ||| ||||||||||||||||    
T  513032 acaagattggatactttttcggttt 513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 202 - 424
Target Start/End: Complemental strand, 17530907 - 17530682
Alignment:
Q  202 gatgatagtagaaagtgaatgaattaaggagtattttatgttggactt----taattttgagcttaattataagtgtgtgtcaggagggataatattact 297  Q
    |||||| | ||||||||||||||||| | |||||||| ||||||||||    |||||||||||||||| | |||||||||| | || |||||||||||||    
T  17530907 gatgatgggagaaagtgaatgaatta-gaagtattttttgttggacttaatttaattttgagcttaatcacaagtgtgtgtgaagaaggataatattact 17530809  T
Q  298 aaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgt 397  Q
    |||||||||||||| ||||||||||||| |||| |  ||||| |||||| ||||||  |||| |  ||||||||| |||| || |||  |||  ||| ||    
T  17530808 aaaatggagagtgaagttagcatcggtttggtttattggttctttggatatcaaaaaaaaaatcggagaaccgaaccaaattatatcggttttagttggt 17530709  T
Q  398 tcggttcggttttgaaccgaaccaaac 424  Q
    ||||||||||||| |||| || |||||    
T  17530708 tcggttcggttttaaaccaaatcaaac 17530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 317 - 494
Target Start/End: Original strand, 8414579 - 8414756
Alignment:
Q  317 gcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccg 416  Q
    |||||||||| ||| | |||||| |||||||||||||||||||||| ||||  ||| ||||||||||   |||| || | |||||||| ||||||||||     
T  8414579 gcatcggttcagtttatcggttctttggatctcaaaattaaaaaccgagaatagaaccaaactagattggtttatgtgtcttcggttcagttttgaacca 8414678  T
Q  417 aaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    ||||||||||  |  |||||||||||||||| |  | ||||| |||||||||||||||| ||||||| ||||||||||    
T  8414679 aaccaaacaaggtcggatactttttcggttttgttcagtttggattttcagtttcatcggttttgtccgaaccactta 8414756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 159 - 426
Target Start/End: Original strand, 27320324 - 27320574
Alignment:
Q  159 ttcttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaag-tgaatgaattaaggagtattttatgttggactttaattttg 257  Q
    |||||| ||||||  ||||| | || |||||| ||||| |||||||||||| | |||  |||||||||||  ||||||||||| |||| |||||||| ||    
T  27320324 ttcttaatagaaatgaaatatagtatgagtgaagagatgagatgatgataggaaaaaaatgaatgaattagagagtattttatattgggctttaattctg 27320423  T
Q  258 agcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaa 357  Q
    | |||||| |||||||||||  ||||||||||   |||||||||| || ||||  |||||||| ||||             |||||||||||| ||||||    
T  27320424 accttaatcataagtgtgtg--aggagggata---ttactaaaatagacagtggggttagcattggtt-------------cattggatctcataattaa 27320505  T
Q  358 aaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    ||||| | ||||||| ||||||||||| ||| | ||| |||||||| | ||||||||||||||||||||    
T  27320506 aaaccgaaaaccgaaccaaactagatcttttaatgttggttcggtttgattttgaaccgaaccaaacaa 27320574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 90 - 265
Target Start/End: Original strand, 8414319 - 8414498
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactgcag-ctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| ||||||| |||||||||| ||||| |||  ||||||| |||||||||| ||   | |||| ||||||    ||||||||| ||||||| |      
T  8414319 aaactaacaagagattgacgatcccaacagcggtgagaaacgatgggttaggtgtggctaacgactagtgttcttttttagtagaaacgaaatagagtgt 8414418  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaat 265  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||| |||| |||||| |||||||| |||||    
T  8414419 gagtgatgagataggatgatgatggtaaaaagtgaatgaattaaagagtatttt-tgtttgactttgattttgagtttaat 8414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 189 - 310
Target Start/End: Complemental strand, 4919714 - 4919595
Alignment:
Q  189 gatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggat 288  Q
    |||||||| |||||||||  | |||||||||||| || ||||||||||||||||||   | |||||||| |  |||| |||||||||||  |||||||||    
T  4919714 gatgagatgagatgatgaagggagaaagtgaatggatcaaggagtattttatgttgcgatctaattttgggtctaatcataagtgtgtg--aggagggat 4919617  T
Q  289 aatattactaaaatggagagtg 310  Q
    | ||||| ||||||||||||||    
T  4919616 agtattagtaaaatggagagtg 4919595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 44581809 - 44581880
Alignment:
Q  322 ggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggt 393  Q
    |||| |||||| |||||  |||||||||||||| ||||| |||||||||||||||||||||| | |||||||    
T  44581809 ggtttggttcatcggttatttggatctcaaaataaaaaatcaagaaccgaatcaaactagattagtttaggt 44581880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 426
Target Start/End: Original strand, 4407736 - 4407880
Alignment:
Q  282 gagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactag 381  Q
    |||| ||||||||| ||||||||  ||||  |||| |||||||| |||| | | |||  |||||||||||||| |||||   |||| |||| ||||| ||    
T  4407736 gaggaataatattagtaaaatgggaagtggagttaacatcggtttggtttatcagtttcttggatctcaaaatgaaaaaatgagaatcgaaccaaacaag 4407835  T
Q  382 atcattttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    ||   ||||| || || ||||||||||||||||||||||| ||||    
T  4407836 atatgtttagattagtccggttcggttttgaaccgaaccagacaa 4407880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 343 - 494
Target Start/End: Original strand, 16584891 - 16585042
Alignment:
Q  343 ggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttc 442  Q
    ||||||| |||| |||||||| ||||| || |||||||||||  | | | || |||||| |||||||  |||||||||||||||  || |||| ||||||    
T  16584891 ggatctcgaaataaaaaaccatgaaccaaaccaaactagatcggtatcgattggttcggatcggtttcaaaccgaaccaaacaaggttggatattttttc 16584990  T
Q  443 ggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    | ||| |  ||||||| | |||| ||||| | | ||||||| ||||||||||    
T  16584991 gttttggttcggtttggactttcggtttcgttggttttgtccgaaccactta 16585042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 25785910 - 25785806
Alignment:
Q  343 ggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttc 442  Q
    ||||||| |||| |||||||| ||||| || ||||||| |||  ||| | || |||||| |||||||  |||||||||||||||  |  |||| ||||||    
T  25785910 ggatctcgaaatgaaaaaccatgaaccaaaccaaactatatcggtttcgattggttcggatcggtttcaaaccgaaccaaacaaggtcggatattttttc 25785811  T
Q  443 ggttt 447  Q
    |||||    
T  25785810 ggttt 25785806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 38601864 - 38601808
Alignment:
Q  312 tgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaac 368  Q
    ||||||||||||||||||||  || ||| ||| |||||||||| ||||| |||||||    
T  38601864 tgttagcatcggttcggttcgtcgattctttgaatctcaaaatcaaaaatcaagaac 38601808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 1e-67; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 185 - 483
Target Start/End: Original strand, 1498063 - 1498361
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| | |||||||| | |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||||||||||  || ||    
T  1498063 gagtgatgagatgaaatgatgatgggagaaagtgaatgtattaaggagtattttaggttggacttcaattttgagcttaatcataagtgtgtgcgagaag 1498162  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||| ||| ||  |||||| ||   ||||| |||    
T  1498163 ggataatattactaaaatggggagtcatgttagcatcggttcggttcatcggtttattggatctcaaaataaaatactgagaaccaaacttaactacatc 1498262  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtc 483  Q
      |||||||| |||| ||||||||||||||||||||||||||  |  |||| ||| || ||||    ||||||| |||||| ||||||||| |||||||    
T  1498263 ggtttaggttggttcagttcggttttgaaccgaaccaaacaaggtcggatattttctcagtttgattcggtttggattttcggtttcatcggttttgtc 1498361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 214 - 494
Target Start/End: Complemental strand, 17770500 - 17770220
Alignment:
Q  214 aagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtc--aggagggataatattactaaaatggagagtga 311  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||   ||||||| |||||||| ||||||||  ||||     
T  17770500 aagtgaatgaattaaggagtattttatgttgggctttaattttgagcttaataataaatgtttgtgcgaggaggg-taatattagtaaaatgggaagtgg 17770402  T
Q  312 tgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttg 411  Q
     ||||||||||||| |||||| |  ||| |||||||||||| |||||||||||||||  |||| |||||| ||  |||||||| ||||||||| | ||||    
T  17770401 -gttagcatcggtttggttcatctattctttggatctcaaatttaaaaaccaagaactaaatccaactagttcggtttaggttggttcggttcagctttg 17770303  T
Q  412 aaccgaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    |||| ||||||| || ||| ||||||||| ||||||||   |||||| |||||  ||||||||  ||||||||||||| ||||    
T  17770302 aaccaaaccaaaaaagattggatacttttgcggtttagtttggtttggatttttggtttcatcagttttgtctgaaccgctta 17770220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 211 - 424
Target Start/End: Original strand, 7239174 - 7239387
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    |||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||| |||||||  ||| ||||| |||||||||||||||||||  ||||    
T  7239174 agaaagtgaatgaagtaagaagtgttttatgttggactttagttttgagcttaatcataagtgcatgtgaggagagataatattactaaaatgggaagtg 7239273  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggtttt 410  Q
    | ||||||||||||||| || | ||| || | |||||| ||||| |||||| |||||||||| |||||||  ||  |||| ||| |||||||||||||||    
T  7239274 aggttagcatcggttcgatttatcggatcttgggatcttaaaataaaaaactaagaaccgaaccaaactaactcgatttaagttggttcggttcggtttt 7239373  T
Q  411 gaaccgaaccaaac 424  Q
    ||||| ||||||||    
T  7239374 gaaccaaaccaaac 7239387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 211 - 424
Target Start/End: Original strand, 7244350 - 7244563
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    |||||||||||||| |||| ||| ||||||||||||||||| ||||||||||||| |||||||  ||| ||||| |||||||||||||||||||  ||||    
T  7244350 agaaagtgaatgaagtaagaagtgttttatgttggactttagttttgagcttaatcataagtgcatgtgaggagagataatattactaaaatgggaagtg 7244449  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggtttt 410  Q
    | ||||||||||||||| || | ||| || | |||||| ||||| |||||| |||||||||| |||||||  ||  |||| ||| |||||||||||||||    
T  7244450 aggttagcatcggttcgatttatcggatcttgggatcttaaaataaaaaactaagaaccgaaccaaactaactcgatttaagttggttcggttcggtttt 7244549  T
Q  411 gaaccgaaccaaac 424  Q
    ||||| ||||||||    
T  7244550 gaaccaaaccaaac 7244563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 316 - 494
Target Start/End: Complemental strand, 29126269 - 29126091
Alignment:
Q  316 agcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaacc 415  Q
    |||||||||||||||||  ||||  |||||| ||||||| |||||   |||||| ||  |||||||| |  |||||||| |||  |||||||||  |||     
T  29126269 agcatcggttcggttcattggttttttggatatcaaaataaaaaattgagaaccaaactaaactagaccggtttaggttggtttagttcggtttcaaact 29126170  T
Q  416 gaaccaaacaaaattagatactttttcggtttagaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
    || |||||||||||  |||||||||||||||| |  |||||| |||| ||  |||| | | ||||||| ||||||||||    
T  29126169 gacccaaacaaaatcggatactttttcggtttggttcggtttaaattctccatttcgttggttttgtccgaaccactta 29126091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 20665708 - 20665643
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaatta 227  Q
    ||||||||||||||||||| |  |||||||||||| |||||||||  | |||||||||||||||||    
T  20665708 ttagtagaaacaaaatagagtgtgagtgatgagatgagatgatgacggaagaaagtgaatgaatta 20665643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 378
Target Start/End: Complemental strand, 39786251 - 39786072
Alignment:
Q  201 tgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt--caggagggataatattacta 298  Q
    ||||||| | |||||| ||||| ||| | || ||||||||||   |||||||||||| | ||||| ||||||||||||   || || |||||||||| ||    
T  39786251 tgatgatgggagaaagcgaatggattcatgactattttatgtcacactttaattttgggtttaatcataagtgtgtgtgcgagaagagataatattagta 39786152  T
Q  299 aaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaac 378  Q
    ||||||||| |   |||||||||||||| |||   ||| || |||||||||||| | |||| |  ||||||||| |||||    
T  39786151 aaatggagattcgggttagcatcggttcagtttgtcggatccttggatctcaaattgaaaatctgagaaccgaaccaaac 39786072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 31896174 - 31896083
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaat 302  Q
    |||||||||||| ||||   | ||||||||||||||||||||||||| || |||  |||||| ||||| |||  ||||||||||| ||||||    
T  31896174 agaaagtgaatggattataaaatattttatgttggactttaattttgggcctaaccataagtttgtgtgaggtaggataatattagtaaaat 31896083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 494
Target Start/End: Complemental strand, 19947962 - 19947716
Alignment:
Q  248 tttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatc 347  Q
    |||||||||| || |||  |||||| ||||| |||  ||||||||||| ||||||   |||||  |||| |||||| | |||||| |||||    |||||    
T  19947962 tttaattttgggcctaaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 19947863  T
Q  348 tcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcggttt 447  Q
    |  |||| |||||||| ||||| ||||||| |||||||  || | || ||| || |||||||  ||| |||||||||||  |  |||| |||||||||||    
T  19947862 ttgaaatgaaaaaccatgaaccaaatcaaagtagatcagattcgattggtttggatcggtttcaaactgaaccaaacaatgtcggatattttttcggttt 19947763  T
Q  448 agaacggtttgaattttcagtttcatcgattttgtctgaaccactta 494  Q
     |  ||||||| | |||| | ||| | ||||||||| ||||||||||    
T  19947762 ggttcggtttggactttcggattcgttgattttgtccgaaccactta 19947716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 378
Target Start/End: Original strand, 41091971 - 41092063
Alignment:
Q  286 gataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaac 378  Q
    |||||||| | |||||||| || ||  |||| |||| |||||||||| || ||| |||||||||||| | ||||||||||||| ||| |||||    
T  41091971 gataatataagtaaaatggggaatggagttaacatcagttcggttcatcgattccttggatctcaaagtaaaaaaccaagaactgaaccaaac 41092063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 1497963 - 1498019
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtga 146  Q
    ||||||||||||||||||||||||   | ||| ||| ||||||||||||||| ||||    
T  1497963 aaactaaaaagagatggacgatcctgacggcggtgaggaacgatgagttaggggtga 1498019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 443
Target Start/End: Original strand, 16746372 - 16746548
Alignment:
Q  267 ataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaaga 366  Q
    |||||| ||||| |||  ||||||||||| ||||||   |||||| |||| |||||| | |||||| || ||    ||||||| |||| |||||||| ||    
T  16746372 ataagtttgtgtgaggtaggataatattagtaaaataaggagtgaggttatcatcggattggttcatcgatttcacggatctcgaaatgaaaaaccatga 16746471  T
Q  367 accgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaacaaaattagatactttttcg 443  Q
    | | || |||||||||||  ||| | || ||| || |||||||  |||||||||||||||  || |||| |||||||    
T  16746472 atcaaaccaaactagatcggtttcgattggtttggatcggtttcaaaccgaaccaaacaaggttggatattttttcg 16746548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 198 - 443
Target Start/End: Complemental strand, 8470 - 8226
Alignment:
Q  198 agatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattact 297  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||| || || | |||||||||| |||||||||||||||||     
T  8470 agatgatgatgggagaaagtgaatgaattaaagagtattt-atgttggactttaattttgagtttgatcaaaagtgtgtgtgaggagggataatattacc 8372  T
Q  298 aaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgt 397  Q
    ||||||  |||||| ||||||| | |||||||||| ||| || |||||||| |||||  |||| | ||||||||| |||||||||||  |||||||| ||    
T  8371 aaaatgcggagtgaggttagcaccagttcggttcatcggctctttggatctaaaaatacaaaatcgagaaccgaaccaaactagatcgatttaggttggt 8272  T
Q  398 tcggttcggttttgaaccgaaccaaacaaaattagatactttttcg 443  Q
    ||  ||| ||||||||||||| |||||||  | |||||||| ||||    
T  8271 tccattcagttttgaaccgaaacaaacaaggtcagatacttcttcg 8226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 426
Target Start/End: Complemental strand, 14063 - 13822
Alignment:
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    |||||||||||| |||||||||| | |||||||||||| |||||| |||| |||||| ||| ||||||||||| || || | |||||||||||| | |||    
T  14063 gagtgatgagatgagatgatgatggaagaaagtgaatggattaagtagtactttatgctgggctttaattttgggcatactcataagtgtgtgtgaagag 13964  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatc 384  Q
    | |||||| || |||||||| |||||| ||||||||||||||| |||| ||||| ||||||||||||||| ||||||| | |||| || ||||  |||||    
T  13963 gtataataatagtaaaatggggagtgaggttagcatcggttcgattcatcggtttattggatctcaaaatgaaaaaccgataaccaaaccaaataagatc 13864  T
Q  385 attttaggtttgttcggttcggttttgaaccgaaccaaacaa 426  Q
    | ||||| || |||||||||| |||||||| |||||| ||||    
T  13863 agtttagattggttcggttcgattttgaactgaaccagacaa 13822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 34039 - 33947
Alignment:
Q  186 agtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgt 278  Q
    |||||||| || |||||||||| | |||||||||||| |||||| |||| |||||||||| ||||||||||| || || | ||||||||||||    
T  34039 agtgatgacatgagatgatgatgggagaaagtgaatggattaagtagtactttatgttgggctttaattttgggcatactcataagtgtgtgt 33947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 162 - 503
Target Start/End: Complemental strand, 6642 - 6310
Alignment:
Q  162 ttagtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagct 261  Q
    ||||||||||| ||||||| |  || |||||||||  ||||||||| | |||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  6642 ttagtagaaacgaaatagagtgtgaatgatgagatgggatgatgatgggagaaagtgaatgaattaaagagtattttatattg-actttaattttgagct 6544  T
Q  262 taattataagtgtgtgtcaggagggataatattactaaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaac 361  Q
    |||| |||||||||| | || |||||||||||||||| ||||| |||||| |||||||||| |            ||||||| |||||||||||||||||    
T  6543 taatcataagtgtgtatgagaagggataatattactagaatggggagtgaggttagcatcgat------------ttcattgtatctcaaaattaaaaac 6456  T
Q  362 caagaaccgaatcaaactagatcattttaggtttgttcggttcggttttgaaccgaaccaaa----caaaattagatactttttcggtttagaacggttt 457  Q
    | ||||||  |||||||||||||  |||||||| ||||| |||  |||| ||||||||||||    | |  |  ||||||||||||||||||  | ||||    
T  6455 cgagaaccagatcaaactagatcggtttaggttggttcgattcaattttaaaccgaaccaaactagctaggtcggatactttttcggtttagttcagttt 6356  T
Q  458 gaattttcagtttcatcgattttgtctgaaccacttatgcccctaa 503  Q
    | ||||||| ||| |||| ||||||| ||| ||||||| |||||||    
T  6355 ggattttcaattttatcggttttgtccgaatcacttatacccctaa 6310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 90 - 331
Target Start/End: Original strand, 344123 - 344364
Alignment:
Q  90 aaactaaaaagagatggacgatcccagcagcgatgaagaacgatgagttaggtgtgactg-cagctagagttctt----agtagaaacaaaatagactac 184  Q
    ||||||| |||||||||| ||||| ||  ||| ||| |||||||| |||||||||||||| | ||||| ||||||    ||||||||| ||||||| ||     
T  344123 aaactaacaagagatggatgatcctagatgcggtgaggaacgatgggttaggtgtgactggcggctagtgttcttttttagtagaaacgaaatagagtat 344222  T
Q  185 gagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggag 284  Q
    ||||||||||||     |||||| | ||||||||||| |||||| || |||||||| |||||||||||||||||||| ||| ||| |||||||| || |     
T  344223 gagtgatgagat-----gatgatggcagaaagtgaattaattaatgaatattttatattggactttaattttgagctgaatcatatgtgtgtgtgagaat 344317  T
Q  285 ggataatattactaaaatggagagtgatgttagcatcggttcggttc 331  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  344318 ggataatataactaaaatggagagtgaggttagcattggttcggttc 344364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0879
Description:

Target: scaffold0879; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 211 - 447
Target Start/End: Original strand, 475 - 711
Alignment:
Q  211 agaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattactaaaatggagagtg 310  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||| |||  |||||| ||||| |||  ||||||||||| ||||||   |||||    
T  475 agaaagtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggataatattagtaaaataaggagtg 574  T
Q  311 atgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttgttcggttcggtttt 410  Q
      |||| |||||| | |||||| |||||    |||||||||||| |||||||| ||||| ||||||||||||||  |||   || |||||| |||||||     
T  575 tggttatcatcggattggttcatcggtttcacggatctcaaaatgaaaaaccatgaaccaaatcaaactagatcggtttcaattggttcggatcggtttc 674  T
Q  411 gaaccgaaccaaacaaaattagatactttttcggttt 447  Q
     ||||||||||||||| || ||||| |||||| ||||    
T  675 aaaccgaaccaaacaagatcagatattttttcagttt 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1335 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1335
Description:

Target: scaffold1335; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 849 - 964
Alignment:
Q  213 aaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcag--gagggataatattactaaaatggagagtg 310  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||  || |||| |||| ||||||| ||  ||| |||||||||| ||||||||||||||    
T  849 aaagtgaatgaattaaaaagtatattatgttggattttaattttaggcctaatcataaatgtgtgtgagatgagagataatattaataaaatggagagtg 948  T
Q  311 atgttagcatcggttc 326  Q
    | ||||||||||||||    
T  949 aggttagcatcggttc 964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1194 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 2396 - 2471
Alignment:
Q  165 gtagaaacaaaatagactacgagtgatgagataagatgatgatagtagaaagtgaatgaattaaggagtattttat 240  Q
    ||||||||| |||||| |  |||||| ||||| |||||||||| | |||||||||| |||||||||||||||||||    
T  2396 gtagaaacagaatagagtgtgagtgacgagatgagatgatgatggcagaaagtgaacgaattaaggagtattttat 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 197 - 426
Target Start/End: Original strand, 1728 - 1954
Alignment:
Q  197 aagatgatgatagtagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataagtgtgtgtcaggagggataatattac 296  Q
    |||||||||||   |||||||||||| |||||  |||||||||||||||| ||||||||| | | |||  |||||| ||||  |||  | |||||||||     
T  1728 aagatgatgatgagagaaagtgaatggattaaaaagtattttatgttggattttaatttt-aacctaaccataagtttgtg--aggtagaataatattag 1824  T
Q  297 taaaatggagagtgatgttagcatcggttcggttcaccggttcattggatctcaaaattaaaaaccaagaaccgaatcaaactagatcattttaggtttg 396  Q
    ||||||   ||||| ||||| |||||| | |||||| |||||    | ||||| ||||||||||||| ||||| || |||| ||||||| ||| | || |    
T  1825 taaaataaggagtgttgttatcatcggattggttcatcggtttcacgaatctcgaaattaaaaaccatgaaccaaaccaaagtagatcagttttgattgg 1924  T
Q  397 ttcggttcggttttgaaccgaaccaaacaa 426  Q
    ||| | ||| |||  |||||||||||||||    
T  1925 ttccgatcgatttcaaaccgaaccaaacaa 1954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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