View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15595_high_2 (Length: 416)
Name: NF15595_high_2
Description: NF15595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15595_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 97 - 408
Target Start/End: Original strand, 4837394 - 4837705
Alignment:
| Q |
97 |
gtaaacattctaatcaaatcaatgttggttagaccacagtttagacgttcaatctttaatatgggagagtgcgttaaaacttaataaaagtttcacatta |
196 |
Q |
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| T |
4837394 |
gtaaacattctaatcagatcattgttggttagaccacagtttagacgtttaatctttaatatggaagagtgcgttaaaacttaataaaagtttcacatga |
4837493 |
T |
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| Q |
197 |
gatgagataagaattaaatataagaaatatcacattcaatatgcattatggtcttatggaatgtaagatcaaatgatattcaacatgatgaaatgtgaga |
296 |
Q |
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| T |
4837494 |
gatgagataagaattaaatataagaaatatcacattcaatatgcattatggtcttatggaatgtacgatcaaatgatattcaacatgatgaaatgtgaga |
4837593 |
T |
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| Q |
297 |
gattgaactctgtgtattggatatgtgatatgtgctagtttgtaccattttgtcattgggaagcacctacccccaccaccccaagaaaaaatcatatgat |
396 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
4837594 |
gattgaactctgtgtattggatatgtgatatgtgctagtttgtaccattttgtcattgggaagcacctccccccaccaccccaagaaaaaatcatatgat |
4837693 |
T |
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| Q |
397 |
catgttcatctc |
408 |
Q |
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||||||| |||| |
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| T |
4837694 |
catgttcgtctc |
4837705 |
T |
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