View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15595_low_15 (Length: 249)
Name: NF15595_low_15
Description: NF15595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15595_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 46690153 - 46689918
Alignment:
| Q |
1 |
aataatcgataccaattttatatgttttaaaacgatgaagggtttaatcaaaaacgaaattcagttttatactaaatatgcagatttagtttgttcatgt |
100 |
Q |
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| T |
46690153 |
aataatcgataccaattttatatgttttaaaacgatgaagggtttaatcaaaaacgaaattcagttttatactgaatatgcagatttagtttgttcatgt |
46690054 |
T |
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| Q |
101 |
attaattaagcaagatttccttgtatattgtgtgcaaataattgaggattcgttctacctttgctttactccgtttatagtttccggacaagaattctcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
46690053 |
attaattaagcaagatttccttgtatattgtgtgcaaataattgaggattcgttctacctttgttttactccgtttatagtttccggacaagaattctcc |
46689954 |
T |
|
| Q |
201 |
aaagaatcgtgaataaacaaattaatagttgatatt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
46689953 |
aaagaatcgtgaataaacaaattaatagttgatatt |
46689918 |
T |
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