View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15598_low_27 (Length: 304)
Name: NF15598_low_27
Description: NF15598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15598_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 6 - 288
Target Start/End: Original strand, 30278339 - 30278621
Alignment:
| Q |
6 |
gaagaatatattagagagtgtgttgttagcataatgttttagaacacaatataaaagtttaggatgtttttgcagcttaattgtgattgcaatattgttt |
105 |
Q |
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| T |
30278339 |
gaagaatacattagagagtgtgctgttagcataatgttttagaacacaatataaaagtttaggatgtttttgcagcttaattgtgattgcaatattgtat |
30278438 |
T |
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| Q |
106 |
gactcatcacgatttgcaatagagaattggagttgaaaaaattaaataaataaatttgcctctaattaatttcattaaatatatgttaagagacttaagt |
205 |
Q |
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| T |
30278439 |
gactcatcacgatttgcaatagagaattggagttgaaaaaattaaataaataaatttgcctctaattaatttcattaaatatatgttaagaaacttaagt |
30278538 |
T |
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| Q |
206 |
atattgaggatcaatttcatttatttttgtctttaattaatgttgatcattcaaattacgtagttgtttttatatgtaatatt |
288 |
Q |
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| T |
30278539 |
atattgaggatcaatttcatttatttttgtctttaattgatgatgatcattcaaattacgtagctgtctttatatgtaatatt |
30278621 |
T |
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