View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15600_high_4 (Length: 323)

Name: NF15600_high_4
Description: NF15600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15600_high_4
NF15600_high_4
[»] chr8 (45 HSPs)
chr8 (17-297)||(15567386-15567662)
chr8 (26-237)||(25147585-25147792)
chr8 (25-237)||(27022229-27022436)
chr8 (26-142)||(27925948-27926064)
chr8 (25-143)||(6464890-6465008)
chr8 (26-237)||(22548885-22549092)
chr8 (26-228)||(10844514-10844712)
chr8 (26-142)||(22026428-22026544)
chr8 (26-142)||(41659086-41659202)
chr8 (26-125)||(3744687-3744786)
chr8 (28-163)||(12827214-12827349)
chr8 (26-237)||(22548439-22548646)
chr8 (33-142)||(25144828-25144937)
chr8 (20-143)||(2044101-2044224)
chr8 (26-137)||(10844932-10845043)
chr8 (27-237)||(34308369-34308575)
chr8 (41-237)||(21316000-21316191)
chr8 (25-143)||(8080322-8080440)
chr8 (26-237)||(12100740-12100946)
chr8 (14-116)||(15819022-15819124)
chr8 (26-92)||(27021910-27021976)
chr8 (37-139)||(41913030-41913132)
chr8 (26-143)||(32292446-32292563)
chr8 (26-142)||(17103130-17103246)
chr8 (20-116)||(22840536-22840632)
chr8 (27-143)||(33852238-33852354)
chr8 (27-237)||(34308825-34309035)
chr8 (33-163)||(25148023-25148153)
chr8 (26-176)||(27819193-27819343)
chr8 (192-260)||(30527349-30527417)
chr8 (33-92)||(28375085-28375144)
chr8 (25-175)||(3745149-3745299)
chr8 (42-143)||(28453403-28453504)
chr8 (33-87)||(22705228-22705282)
chr8 (192-237)||(17103293-17103338)
chr8 (192-237)||(41658995-41659040)
chr8 (49-113)||(6466329-6466392)
chr8 (192-235)||(32292152-32292195)
chr8 (192-237)||(22026590-22026636)
chr8 (204-237)||(3744861-3744894)
chr8 (192-229)||(6463442-6463479)
chr8 (42-87)||(6466775-6466820)
chr8 (192-237)||(25148177-25148222)
chr8 (194-235)||(32292610-32292651)
chr8 (199-235)||(22840441-22840477)
[»] chr5 (42 HSPs)
chr5 (26-237)||(2474454-2474661)
chr5 (26-260)||(18750063-18750293)
chr5 (20-143)||(10927383-10927506)
chr5 (26-237)||(8641925-8642131)
chr5 (25-143)||(10926926-10927044)
chr5 (25-143)||(27646815-27646933)
chr5 (26-143)||(1821955-1822072)
chr5 (25-237)||(17445345-17445553)
chr5 (26-237)||(189117-189324)
chr5 (25-163)||(2193864-2194002)
chr5 (26-237)||(3886491-3886698)
chr5 (26-116)||(21886153-21886243)
chr5 (26-116)||(34867839-34867929)
chr5 (26-163)||(2474008-2474145)
chr5 (26-237)||(34371661-34371868)
chr5 (25-238)||(42788535-42788744)
chr5 (25-229)||(34372116-34372316)
chr5 (33-235)||(20858434-20858631)
chr5 (33-192)||(30719736-30719895)
chr5 (25-143)||(39146987-39147105)
chr5 (20-237)||(8391212-8391424)
chr5 (33-192)||(30684487-30684646)
chr5 (26-237)||(3886947-3887154)
chr5 (41-163)||(15512972-15513093)
chr5 (33-143)||(20039455-20039564)
chr5 (26-92)||(22556585-22556651)
chr5 (42-143)||(5066871-5066972)
chr5 (27-237)||(24182136-24182341)
chr5 (107-251)||(30720136-30720276)
chr5 (41-175)||(18304495-18304629)
chr5 (26-92)||(22557018-22557084)
chr5 (75-143)||(29680087-29680155)
chr5 (188-235)||(1880283-1880330)
chr5 (197-259)||(5786061-5786123)
chr5 (192-237)||(2474160-2474205)
chr5 (107-237)||(30684901-30685027)
chr5 (43-115)||(4658001-4658073)
chr5 (26-98)||(16370733-16370805)
chr5 (33-116)||(4673478-4673561)
chr5 (192-229)||(187769-187806)
chr5 (192-237)||(2194015-2194060)
chr5 (33-110)||(11160694-11160771)
[»] chr3 (45 HSPs)
chr3 (28-237)||(50347797-50348002)
chr3 (26-237)||(31284166-31284373)
chr3 (20-237)||(13150444-13150657)
chr3 (25-237)||(32227111-32227319)
chr3 (25-163)||(11179994-11180132)
chr3 (26-237)||(28561795-28562001)
chr3 (25-235)||(32227548-32227754)
chr3 (25-237)||(13149989-13150197)
chr3 (20-143)||(25230685-25230808)
chr3 (20-143)||(25238272-25238395)
chr3 (25-143)||(20885097-20885215)
chr3 (20-142)||(39640980-39641102)
chr3 (14-235)||(25238576-25238793)
chr3 (27-237)||(32386624-32386830)
chr3 (37-237)||(27187219-27187416)
chr3 (33-143)||(4067340-4067450)
chr3 (26-237)||(16811430-16811635)
chr3 (26-173)||(29224373-29224520)
chr3 (25-116)||(32796942-32797033)
chr3 (34-237)||(14814006-14814205)
chr3 (34-237)||(14820211-14820410)
chr3 (26-116)||(41472350-41472439)
chr3 (26-236)||(8067329-8067535)
chr3 (20-115)||(30529730-30529825)
chr3 (25-143)||(25230228-25230346)
chr3 (25-143)||(25237815-25237933)
chr3 (27-116)||(25239084-25239173)
chr3 (26-92)||(7493930-7493996)
chr3 (26-237)||(39653213-39653420)
chr3 (36-143)||(25802528-25802635)
chr3 (25-143)||(2911143-2911261)
chr3 (26-92)||(7477240-7477306)
chr3 (34-116)||(25248168-25248250)
chr3 (33-143)||(37045091-37045201)
chr3 (45-92)||(3899868-3899915)
chr3 (26-141)||(25802986-25803101)
chr3 (26-116)||(26309996-26310086)
chr3 (26-115)||(16810974-16811063)
chr3 (192-260)||(2911295-2911363)
chr3 (194-237)||(11179924-11179967)
chr3 (192-235)||(37045243-37045286)
chr3 (194-235)||(25230989-25231030)
chr3 (194-235)||(25239019-25239060)
chr3 (192-237)||(41473752-41473797)
chr3 (34-98)||(31103985-31104049)
[»] chr2 (41 HSPs)
chr2 (33-237)||(33771057-33771257)
chr2 (25-143)||(33175006-33175123)
chr2 (25-229)||(8256574-8256774)
chr2 (26-163)||(41754338-41754475)
chr2 (26-238)||(30966739-30966947)
chr2 (34-116)||(13191031-13191113)
chr2 (26-237)||(25337887-25338094)
chr2 (26-237)||(30966283-30966490)
chr2 (33-143)||(33174559-33174669)
chr2 (26-143)||(16379442-16379559)
chr2 (34-237)||(24818383-24818581)
chr2 (26-237)||(29259510-29259717)
chr2 (20-141)||(83060-83181)
chr2 (20-116)||(18098885-18098981)
chr2 (20-139)||(1707084-1707203)
chr2 (33-116)||(8073948-8074031)
chr2 (33-143)||(27882906-27883016)
chr2 (25-139)||(29804730-29804844)
chr2 (33-236)||(30963154-30963353)
chr2 (26-143)||(16378986-16379103)
chr2 (20-163)||(11388231-11388373)
chr2 (20-143)||(38898892-38899015)
chr2 (34-115)||(5399825-5399906)
chr2 (26-143)||(25434036-25434153)
chr2 (43-143)||(1912591-1912690)
chr2 (25-142)||(16542033-16542151)
chr2 (28-95)||(36924450-36924519)
chr2 (26-99)||(1953204-1953277)
chr2 (26-115)||(20502072-20502160)
chr2 (20-163)||(11394578-11394719)
chr2 (41-143)||(15619962-15620064)
chr2 (192-237)||(32377797-32377842)
chr2 (192-235)||(16379148-16379191)
chr2 (188-235)||(16379600-16379647)
chr2 (153-237)||(18875875-18875955)
chr2 (25-87)||(18447954-18448016)
chr2 (192-237)||(30963610-30963655)
chr2 (26-91)||(30963752-30963817)
chr2 (192-237)||(32377606-32377651)
chr2 (204-260)||(16704513-16704569)
chr2 (192-228)||(20502175-20502211)
[»] chr6 (43 HSPs)
chr6 (26-237)||(20850370-20850577)
chr6 (26-237)||(13191403-13191610)
chr6 (26-237)||(17027421-17027628)
chr6 (20-163)||(16520011-16520154)
chr6 (20-116)||(20896695-20896791)
chr6 (20-260)||(1991596-1991832)
chr6 (25-116)||(3652534-3652625)
chr6 (20-143)||(6330892-6331015)
chr6 (20-143)||(20126162-20126285)
chr6 (25-143)||(11062333-11062451)
chr6 (26-163)||(13492838-13492975)
chr6 (26-142)||(21312020-21312136)
chr6 (26-237)||(7911927-7912134)
chr6 (25-238)||(23776489-23776697)
chr6 (25-237)||(23986207-23986415)
chr6 (26-237)||(7912359-7912566)
chr6 (26-116)||(27334210-27334300)
chr6 (26-116)||(27394950-27395040)
chr6 (26-130)||(2681209-2681313)
chr6 (20-237)||(9352105-9352318)
chr6 (25-133)||(15929630-15929738)
chr6 (37-143)||(17851434-17851540)
chr6 (38-163)||(13492393-13492518)
chr6 (26-143)||(21311564-21311681)
chr6 (20-111)||(31821704-31821795)
chr6 (26-143)||(2720543-2720661)
chr6 (26-116)||(14771726-14771816)
chr6 (26-139)||(2890823-2890936)
chr6 (55-164)||(12194406-12194515)
chr6 (35-92)||(20735753-20735810)
chr6 (193-237)||(27334305-27334349)
chr6 (193-237)||(27395045-27395089)
chr6 (26-139)||(33774986-33775101)
chr6 (34-235)||(17731001-17731202)
chr6 (192-235)||(20126074-20126117)
chr6 (26-93)||(32292934-32293001)
chr6 (26-115)||(9440317-9440406)
chr6 (76-237)||(28780209-28780366)
chr6 (25-92)||(9440888-9440955)
chr6 (75-138)||(33470935-33470998)
chr6 (41-138)||(28065820-28065920)
chr6 (20-117)||(15929242-15929339)
chr6 (204-237)||(20896577-20896610)
[»] chr1 (44 HSPs)
chr1 (26-237)||(20053970-20054177)
chr1 (26-237)||(20054426-20054633)
chr1 (26-237)||(20054882-20055089)
chr1 (26-237)||(20055338-20055545)
chr1 (26-237)||(20055794-20056001)
chr1 (26-237)||(20056250-20056457)
chr1 (26-237)||(20057153-20057360)
chr1 (26-237)||(16907283-16907491)
chr1 (25-237)||(16451823-16452031)
chr1 (25-237)||(16460976-16461184)
chr1 (33-237)||(20056706-20056906)
chr1 (26-237)||(20057609-20057816)
chr1 (26-237)||(20845551-20845758)
chr1 (27-237)||(46693625-46693831)
chr1 (25-237)||(52250254-52250462)
chr1 (26-229)||(35759506-35759705)
chr1 (26-237)||(50002597-50002804)
chr1 (26-142)||(35760895-35761011)
chr1 (20-143)||(43057503-43057626)
chr1 (26-229)||(38340955-38341154)
chr1 (25-116)||(50002292-50002383)
chr1 (26-116)||(2328364-2328454)
chr1 (26-116)||(20061198-20061288)
chr1 (42-175)||(2739587-2739720)
chr1 (33-141)||(20060322-20060430)
chr1 (45-143)||(2634992-2635090)
chr1 (25-143)||(43057045-43057163)
chr1 (27-139)||(30872934-30873046)
chr1 (27-163)||(51372834-51372970)
chr1 (21-143)||(12728035-12728158)
chr1 (33-163)||(12883580-12883710)
chr1 (20-141)||(31822645-31822766)
chr1 (34-143)||(7548148-7548257)
chr1 (28-177)||(23180781-23180930)
chr1 (42-237)||(50002965-50003156)
chr1 (192-237)||(31823009-31823054)
chr1 (192-235)||(7547848-7547891)
chr1 (34-92)||(2634523-2634581)
chr1 (187-237)||(35759954-35760004)
chr1 (25-94)||(10820640-10820709)
chr1 (192-237)||(52250754-52250799)
chr1 (192-237)||(52251091-52251136)
chr1 (75-139)||(52250641-52250705)
chr1 (75-139)||(52250978-52251042)
[»] scaffold0040 (1 HSPs)
scaffold0040 (25-275)||(2062-2308)
[»] scaffold0499 (1 HSPs)
scaffold0499 (26-237)||(1941-2148)
[»] scaffold0322 (1 HSPs)
scaffold0322 (26-237)||(19015-19222)
[»] scaffold0243 (1 HSPs)
scaffold0243 (26-237)||(1269-1476)
[»] chr7 (51 HSPs)
chr7 (20-237)||(42515587-42515800)
chr7 (26-236)||(2941648-2941854)
chr7 (25-142)||(36422300-36422417)
chr7 (26-142)||(2189193-2189309)
chr7 (25-237)||(28495902-28496110)
chr7 (25-237)||(34405481-34405689)
chr7 (20-143)||(35474101-35474224)
chr7 (26-237)||(2193305-2193512)
chr7 (25-163)||(2465781-2465919)
chr7 (26-163)||(13125096-13125233)
chr7 (25-148)||(6719049-6719172)
chr7 (34-237)||(9125016-9125215)
chr7 (33-143)||(42515148-42515258)
chr7 (25-142)||(2465972-2466089)
chr7 (26-229)||(5406485-5406685)
chr7 (33-125)||(11517387-11517479)
chr7 (33-143)||(679873-679982)
chr7 (26-237)||(18833335-18833542)
chr7 (25-143)||(29039000-29039118)
chr7 (27-116)||(2611659-2611748)
chr7 (25-98)||(6747623-6747696)
chr7 (76-237)||(7646514-7646671)
chr7 (192-275)||(36422593-36422676)
chr7 (25-143)||(22529215-22529333)
chr7 (25-163)||(28495568-28495706)
chr7 (25-143)||(46425789-46425907)
chr7 (26-143)||(25182410-25182527)
chr7 (26-235)||(29357348-29357553)
chr7 (192-251)||(7461258-7461317)
chr7 (26-141)||(9623257-9623371)
chr7 (28-143)||(35527101-35527216)
chr7 (27-141)||(26421287-26421401)
chr7 (26-92)||(36015442-36015508)
chr7 (27-116)||(11372501-11372590)
chr7 (192-260)||(3305215-3305283)
chr7 (38-138)||(37672221-37672321)
chr7 (192-237)||(6718965-6719010)
chr7 (75-237)||(7646368-7646526)
chr7 (26-115)||(26421768-26421857)
chr7 (192-237)||(36422462-36422507)
chr7 (192-237)||(43233168-43233213)
chr7 (75-143)||(7461331-7461398)
chr7 (194-237)||(2189357-2189400)
chr7 (192-235)||(2611551-2611594)
chr7 (192-235)||(6747968-6748011)
chr7 (60-163)||(13122465-13122568)
chr7 (26-113)||(31743834-31743921)
chr7 (37-115)||(16192379-16192457)
chr7 (34-92)||(43233470-43233528)
chr7 (25-70)||(26957610-26957655)
chr7 (192-237)||(28495509-28495554)
[»] chr4 (55 HSPs)
chr4 (25-143)||(23942763-23942881)
chr4 (26-237)||(49998685-49998892)
chr4 (25-143)||(50398967-50399085)
chr4 (26-163)||(12691953-12692090)
chr4 (26-237)||(23350167-23350374)
chr4 (28-138)||(43928943-43929052)
chr4 (25-143)||(50398512-50398630)
chr4 (25-143)||(51331255-51331373)
chr4 (26-115)||(31817854-31817943)
chr4 (20-163)||(44471279-44471422)
chr4 (42-176)||(1464212-1464346)
chr4 (25-143)||(1645723-1645841)
chr4 (27-142)||(21220306-21220421)
chr4 (20-275)||(33764903-33765154)
chr4 (25-163)||(7678576-7678714)
chr4 (27-237)||(4127773-4127979)
chr4 (20-92)||(8467825-8467897)
chr4 (39-163)||(24628931-24629055)
chr4 (43-163)||(50814779-50814899)
chr4 (33-116)||(4127438-4127521)
chr4 (25-143)||(3169254-3169372)
chr4 (26-92)||(17628560-17628626)
chr4 (25-143)||(23943216-23943334)
chr4 (26-237)||(35871677-35871883)
chr4 (25-143)||(53996089-53996207)
chr4 (26-139)||(31817376-31817489)
chr4 (27-163)||(44470829-44470964)
chr4 (20-143)||(29628642-29628764)
chr4 (44-275)||(4185782-4186007)
chr4 (25-91)||(14572176-14572242)
chr4 (34-163)||(24629387-24629516)
chr4 (26-113)||(9423862-9423949)
chr4 (26-141)||(13613874-13613988)
chr4 (33-116)||(27029333-27029416)
chr4 (26-176)||(14351844-14351994)
chr4 (26-92)||(14571746-14571812)
chr4 (33-115)||(27026559-27026640)
chr4 (41-115)||(34554493-34554567)
chr4 (26-143)||(21067331-21067448)
chr4 (33-94)||(23976242-23976303)
chr4 (194-237)||(5810047-5810090)
chr4 (192-237)||(15268057-15268102)
chr4 (34-175)||(42838680-42838824)
chr4 (194-237)||(4127302-4127345)
chr4 (192-235)||(4414273-4414316)
chr4 (37-87)||(20306191-20306241)
chr4 (193-235)||(29628540-29628582)
chr4 (193-239)||(40607143-40607189)
chr4 (38-91)||(23091537-23091590)
chr4 (192-237)||(24629320-24629365)
chr4 (192-229)||(27578178-27578215)
chr4 (79-116)||(33294893-33294930)
chr4 (192-237)||(35477871-35477916)
chr4 (43-116)||(52048668-52048740)
chr4 (192-260)||(44470736-44470804)
[»] scaffold0047 (2 HSPs)
scaffold0047 (25-229)||(17496-17696)
scaffold0047 (33-260)||(18002-18224)
[»] scaffold0024 (1 HSPs)
scaffold0024 (33-229)||(105776-105968)
[»] scaffold0002 (2 HSPs)
scaffold0002 (25-237)||(154805-155013)
scaffold0002 (192-237)||(154513-154558)
[»] scaffold0022 (4 HSPs)
scaffold0022 (26-142)||(162659-162775)
scaffold0022 (193-237)||(163024-163068)
scaffold0022 (33-116)||(69822-69905)
scaffold0022 (192-235)||(163282-163325)
[»] scaffold0168 (1 HSPs)
scaffold0168 (25-237)||(2790-2998)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-237)||(10357-10555)
[»] scaffold0020 (1 HSPs)
scaffold0020 (26-142)||(107444-107560)
[»] scaffold0333 (4 HSPs)
scaffold0333 (26-116)||(4610-4700)
scaffold0333 (47-142)||(5091-5186)
scaffold0333 (192-235)||(4771-4814)
scaffold0333 (192-235)||(5231-5274)
[»] scaffold0557 (2 HSPs)
scaffold0557 (25-116)||(2153-2244)
scaffold0557 (192-235)||(2307-2350)
[»] scaffold0088 (1 HSPs)
scaffold0088 (26-89)||(23722-23785)
[»] scaffold0005 (2 HSPs)
scaffold0005 (25-91)||(245134-245200)
scaffold0005 (26-92)||(245564-245630)
[»] scaffold0664 (1 HSPs)
scaffold0664 (33-117)||(3988-4072)
[»] scaffold0389 (1 HSPs)
scaffold0389 (75-237)||(13423-13581)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-93)||(142304-142371)
[»] scaffold0036 (1 HSPs)
scaffold0036 (40-116)||(26133-26209)
[»] scaffold0391 (1 HSPs)
scaffold0391 (33-143)||(14797-14907)
[»] scaffold0126 (1 HSPs)
scaffold0126 (192-258)||(37182-37248)
[»] scaffold0217 (1 HSPs)
scaffold0217 (194-237)||(523-566)
[»] scaffold0277 (1 HSPs)
scaffold0277 (192-237)||(14592-14637)


Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 15567662 - 15567386
Alignment:
Q  17 attagacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  15567662 attagacatcatggtggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactc 15567563  T
Q  117 tgcaattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaa 216  Q
     ||| ||||||||||||||||||||||  ||||| ||||||||||||||||||   ||||| ||||| |||     ||||||||||||||||||||||||    
T  15567562 cgcagttaatcgtgtttgacttggagtagttttggaatggatgaccttctgaattttttttcgaaaaacat----acgagtgaggataaaacacactgaa 15567467  T
Q  217 aagactcgtgttgatttgtggaaccaatcaacaatacttaaagttatctgggaagttacggggtcggtaatttgttttatt 297  Q
    || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15567466 aatactcgtgttgatttgtaaaaccaatcaacaatacttaaagttatctgggaagttacggggtcggtaatttgttttatt 15567386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 25147585 - 25147792
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||||||||||||||||||  |||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||   | ||||    
T  25147585 catggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaa 25147684  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
    ||||| |||||||||||  ||||||  |||| |||||| | |  ||||||  ||| ||    ||| ||||||||| | ||||||| ||||||||||||||    
T  25147685 tcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcctgataa----gcgtgcgagtgagtacaaaacacgctgaaaagactcgt 25147780  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  25147781 gttggtttgtgg 25147792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 27022436 - 27022229
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| |||| || ||| ||||||||| ||||  | || ||||| |||||||||||  || |||    
T  27022436 acatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataagaactccacagtta 27022337  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| ||| ||||||||| | ||     ||| ||||||||||| ||||||| || ||||||||||    
T  27022336 agcgtgcttgacttggagcaattttgggatgggtgacctactggaaagtttttggtaa-----gcgtgcgagtgaggacaaaacacgctaaaaagactcg 27022242  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  27022241 tgttggtttgtgg 27022229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 27925948 - 27926064
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||| ||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| |||||||||||||||||  || ||||    
T  27925948 catggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaa 27926047  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  27926048 gcgtgcttgacttggag 27926064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 6465008 - 6464890
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || |||||||||| |||||||| |||| ||||| ||||| |||||  || |||    
T  6465008 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataacaactccacagtta 6464909  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  6464908 agcgtgcttgacttggagt 6464890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 22549092 - 22548885
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| ||||| |||||  || ||||    
T  22549092 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaaactccacagttaa 22548993  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||       || | ||| ||||||||||||||||||| ||||| ||||||||    
T  22548992 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttt----cccagtaagcgtgcgagtgaggataaaacacgctgaacagactcgt 22548897  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  22548896 gttggtttgtgg 22548885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 10844712 - 10844514
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||||||||| |||||||| ||||| ||||  | ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  10844712 catggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 10844613  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||| ||  ||||||  |||| |||||| | |  |||||| | |  ||||||    ||||||||||| ||||||| ||||||||||||||    
T  10844612 gcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttctcggtaagcat----gcgagtgaggacaaaacacgctgaaaagactcgt 10844517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 22026428 - 22026544
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  22026428 catggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 22026527  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  22026528 gcgtgcttgacttggag 22026544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 41659202 - 41659086
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||   ||| ||||| |||||||||||  || ||||    
T  41659202 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataagaactccacagttaa 41659103  T
Q  126 tcgtgtttgacttggag 142  Q
     ||||||||||||||||    
T  41659102 gcgtgtttgacttggag 41659086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 3744687 - 3744786
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| ||||||||||||||||| |||||| ||||||| ||| ||||| ||||||||| ||||  ||||||||||||||||| |||||||    
T  3744687 catggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataagaactctacaattaa 3744786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 12827349 - 12827214
Alignment:
Q  28 tggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatc 127  Q
    |||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |    
T  12827349 tggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagc 12827250  T
Q  128 gtgtttgacttggagttattttgaaatggatgacct 163  Q
    ||| |||||||||||  ||||||  |||| ||||||    
T  12827249 gtgcttgacttggagcaattttgggatgggtgacct 12827214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 22548646 - 22548439
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||  ||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| ||||| |||||  || ||||    
T  22548646 catggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataataactccacagttaa 22548547  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||       || | ||| ||||||||||| ||||||| ||||||||||||||    
T  22548546 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttt----cccagtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 22548451  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  22548450 gttggtttgtgg 22548439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 25144828 - 25144937
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||| ||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |||| |    
T  25144828 gaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 25144927  T
Q  133 tgacttggag 142  Q
    ||||||||||    
T  25144928 tgacttggag 25144937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 2044101 - 2044224
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||||||||||||||||||||||  ||||| |||| || |||||||||| |||||||| ||||  |||| ||||| |||||  |    
T  2044101 agactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccac 2044200  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| |||| ||||||||||||    
T  2044201 agttaagcgtgcttgacttggagt 2044224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 10844932 - 10845043
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  10844932 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 10845031  T
Q  126 tcgtgtttgact 137  Q
     |||| ||||||    
T  10845032 gcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 34308575 - 34308369
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| ||||||||||||||||||| ||||||| ||||| |||| || ||||||||||||||||||  ||||   ||| |||||||||||  || ||||     
T  34308575 atggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacacttaag 34308476  T
Q  127 cgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtg 226  Q
    |||| ||| |||||||  ||||||| |||| |||||| | |  ||||||   |  ||||||    | ||||||||| ||||||| |||||||||||||||    
T  34308475 cgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcat----gtgagtgaggacaaaacacgctgaaaagactcgtg 34308380  T
Q  227 ttgatttgtgg 237  Q
     || |||||||    
T  34308379 ctggtttgtgg 34308369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 237
Target Start/End: Complemental strand, 21316191 - 21316000
Alignment:
Q  41 gcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgg 140  Q
    ||||| ||||||||||||| ||||| |||| || ||||||||||| ||||||  |||| |||||||||||||||||  || ||||  ||| |||||||||    
T  21316191 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttcataagaactccacagttaagtgtgcttgacttgg 21316092  T
Q  141 agttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||| ||||||  | || |||||| | |  ||||||   | ||     ||| ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  21316091 agtaattttggtaagggtgacctaccgcgaagtttccggtaa-----gcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 21316000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 8080440 - 8080322
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| ||| ||||||||||||||| ||||| |||| || |||||||||| |||||||| ||||  |||| ||||||||||   || |||    
T  8080440 acatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaacttcacagtta 8080341  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  8080340 agcgtgcttgacttggagt 8080322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 12100740 - 12100946
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||| | |||||||||| |||||||| ||||| |||| ||  |||||||||||||||||  |||| ||||||||||||||||   || ||||    
T  12100740 catggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggtagctcatttcataagaacttcacagttaa 12100839  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||  |     | | ||| ||||||||||| ||||||| ||||||||||||||    
T  12100840 gcgtgcttgacttggagcaattttg-gatgggtgacctaccgggaagtttcct----cgtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 12100934  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  12100935 gttggtttgtgg 12100946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 15819124 - 15819022
Alignment:
Q  14 agaattagacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaa 113  Q
    ||||| |||||||||||| ||||||| ||||| || |||||||||| |||||||||| || || |||||||||||||||  ||||  |||| ||||||||    
T  15819124 agaatgagacaacatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaa 15819025  T
Q  114 ctc 116  Q
    |||    
T  15819024 ctc 15819022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 27021976 - 27021910
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||    
T  27021976 catggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttctttt 27021910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 41913030 - 41913132
Alignment:
Q  37 gaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgac 136  Q
    |||||||||||||||||||||||  |||| |||| || |||||||| |||||||||| ||||  |||| ||||||||||| ||| |||| |||| |||||    
T  41913030 gaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccataagaactccgcagttaagcgtgcttgac 41913129  T
Q  137 ttg 139  Q
    |||    
T  41913130 ttg 41913132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 32292446 - 32292563
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| ||||||||||||||||||| ||||  |||| || |||| ||||||||||||||  |||  |||| |||||||||||  || ||||    
T  32292446 catggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttctttttgctagcccattccataagaactccacagttaa 32292545  T
Q  126 tcgtgtttgacttggagt 143  Q
     |||| ||||||||||||    
T  32292546 gcgtgcttgacttggagt 32292563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 17103130 - 17103246
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| ||| | |||| || |||| |||||||||||||  |||| ||||| |||||||||||  |  ||||    
T  17103130 catggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatcttcttttcggtagctcattccataagaactccacggttaa 17103229  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  17103230 gcgtgcttgacttggag 17103246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 22840632 - 22840536
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||| ||||||| ||| |||| |||||||||||||||||| ||||  |||| || |||||||||||||||||||  ||| ||||| |||||||||||    
T  22840632 agactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatcttctttttgttagctcattccataagaactc 22840536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 33852354 - 33852238
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| |||||||  |||||||||||||||||| ||||| ||||  | ||||||| ||||||||||| ||||  |||| ||||||||||   |||||||     
T  33852354 atggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttctttttggtagcccattccataagaacttcacaattaag 33852255  T
Q  127 cgtgtttgacttggagt 143  Q
    |||| ||||||||||||    
T  33852254 cgtgcttgacttggagt 33852238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 34309035 - 34308825
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactac----atataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaat 122  Q
    ||||| ||||||||||||||||||| ||||||| |||||    ||||| || ||||||||||||||||||  ||||   ||| |||||||||||  || |    
T  34309035 atggttgaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacagt 34308936  T
Q  123 taatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagact 222  Q
    ||| |||| ||| |||||||  ||||||| |||| |||||| | |  ||||||   |  ||||||    | ||||||||| ||||||| |||||||||||    
T  34308935 taagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcat----gtgagtgaggacaaaacacgctgaaaagact 34308840  T
Q  223 cgtgttgatttgtgg 237  Q
    ||||||| |||||||    
T  34308839 cgtgttggtttgtgg 34308825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 25148023 - 25148153
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||||||||||||||||||||||   ||| |||| || |||||||||| |||||||  |||| ||||| |||||||||||  || |||| |||| |    
T  25148023 gaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtgct 25148122  T
Q  133 tgacttggagttattttgaaatggatgacct 163  Q
    |||||| |||  ||||||  |||| ||||||    
T  25148123 tgactttgagcaattttgggatgggtgacct 25148153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 27819343 - 27819193
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||| ||||||||||||||| ||||| |||| || ||| ||||||||||||||   ||| ||||| ||||| |||||  || ||||    
T  27819343 catggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcaatagctcattccataaaaactccacagttaa 27819244  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagtttt 176  Q
      ||||||||||| ||||  | ||   |||| ||||||||||| |||||||    
T  27819243 gtgtgtttgactttgagtagtatttggatgggtgaccttctgataagtttt 27819193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 260
Target Start/End: Complemental strand, 30527417 - 30527349
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaagt 260  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | | || || ||||| ||||||||    
T  30527417 gcgagtgaggataaaacacgctgaaaagactcgtgttgatttgtaggatcagtcgacaatgcttaaagt 30527349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 28375144 - 28375085
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    ||||||||||||||||||||||||||| ||||| || | || ||||||||||||||||||    
T  28375144 gaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttctttt 28375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 175
Target Start/End: Original strand, 3745149 - 3745299
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||  |||||||||| ||||| | ||||| ||||||| ||| ||||||||||||||| ||||  |||| ||||| |||||  || | |    
T  3745149 acatggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccacagtca 3745248  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttt 175  Q
    | |||| ||||||| |||  ||||||  |||| ||||| ||||| ||||||    
T  3745249 agcgtgcttgacttagagcaattttgggatggctgaccatctgagaagttt 3745299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 28453403 - 28453504
Alignment:
Q  42 cttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgga 141  Q
    ||||||||||||||||   ||||| ||||  | ||||||||||||||||| | ||||  |||| |||||||||||| || |||| |||| ||||||||||    
T  28453403 cttataagaattgttttatactacctatattaacaagatgcatcttctttatggtagcccattccataagaactctacagttaagcgtgcttgacttgga 28453502  T
Q  142 gt 143  Q
    ||    
T  28453503 gt 28453504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 22705228 - 22705282
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatctt 87  Q
    ||||||||| ||||||||||||||||| ||||| |||| || |||||||||||||    
T  22705228 gaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 17103293 - 17103338
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  17103293 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 17103338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 41659040 - 41658995
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  41659040 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 41658995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 6466329 - 6466392
Alignment:
Q  49 gaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaa 113  Q
    ||||||||||| ||||| ||||||| |||| ||||||||| |||| |||| ||||||||||||||    
T  6466329 gaattgtttggtactacttataccaacaagttgcatcttccttttggtag-tcatttcataagaa 6466392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 32292152 - 32292195
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  32292152 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 32292195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 22026590 - 22026636
Alignment:
Q  192 gcgagtgaggataaaa-cacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||    
T  22026590 gcgagtgaggacaaaaacacactgaaaagactcgtgttggtttgtgg 22026636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 3744861 - 3744894
Alignment:
Q  204 aaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||||||||||||||||||||||||| |||||||    
T  3744861 aaaacacactgaaaagactcgtgttggtttgtgg 3744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 6463479 - 6463442
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttg 229  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  6463479 gcgagtgaggacaaaacacgctgaaaagactcgtgttg 6463442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 6466775 - 6466820
Alignment:
Q  42 cttataagaattgtttggcactacatataccaccaagatgcatctt 87  Q
    ||||||| |||||||||| ||||| ||||||| |||||||||||||    
T  6466775 cttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 25148177 - 25148222
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||  ||||||| |||||||||||||||||| |||||||    
T  25148177 gcgagtgaggtcaaaacacgctgaaaagactcgtgttggtttgtgg 25148222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 32292610 - 32292651
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||| ||||||| |||||||||||||||||| |||||    
T  32292610 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 32292651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 22840477 - 22840441
Alignment:
Q  199 aggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    |||| |||||||||||||||||||||||||| |||||    
T  22840477 aggacaaaacacactgaaaagactcgtgttggtttgt 22840441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 2474454 - 2474661
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||| ||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  2474454 catggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2474553  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||| |||| |||||| | | |||||||   |  ||||||    ||||||||||| ||||||| ||||||||||||||    
T  2474554 gcgtgcttgacttggagcaattttgagatgggtgacctaccggaaagtttcccggtaagcat----gcgagtgaggaaaaaacacgctgaaaagactcgt 2474649  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  2474650 gttggtttgtgg 2474661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 260
Target Start/End: Complemental strand, 18750293 - 18750063
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||| |||||| |||||||||| ||||| |||||||  |||||||||||||||||  |||| | ||| |||||||||||   ||||||    
T  18750293 catggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactccataattaa 18750194  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
    ||||  |||||||||||  |||||   |||| |||||||||   |||||||||    || | | | ||||||||||| |||||||||||||||||||||     
T  18750193 tcgtacttgacttggagcaattttaggatgggtgaccttctaggaagtttttt----agaaagtgtgcgagtgaggacaaaacacactgaaaagactcga 18750098  T
Q  226 gttgatttgtggaaccaatcaacaatacttaaagt 260  Q
    |||| |||||||   || |||||||||||||||||    
T  18750097 gttggtttgtggggtcagtcaacaatacttaaagt 18750063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 10927506 - 10927383
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  |    
T  10927506 agactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccac 10927407  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| |||| ||||||||||||    
T  10927406 agttaaacgtgcttgacttggagt 10927383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 8642131 - 8641925
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||| ||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  8642131 catggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 8642032  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||| | |||| |||||| | |  |||||| | |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  8642031 gcgtgcttgacttggagcaattttaagatgggtgacctac-gggaagtttctcg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 8641937  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  8641936 gttggtttgtgg 8641925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 10927044 - 10926926
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || |||||||||||||| |||| ||||| |||| |||||||||||  || |||    
T  10927044 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaactccacagtta 10926945  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  10926944 aacgtgcttgacttggagt 10926926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 27646933 - 27646815
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||| ||||  ||||||||||||||||  || |||    
T  27646933 acatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactccacagtta 27646834  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||| ||||||||    
T  27646833 agcgtgcttgtcttggagt 27646815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 1821955 - 1822072
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  || ||||    
T  1821955 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacatttaa 1822054  T
Q  126 tcgtgtttgacttggagt 143  Q
     |||| ||||||||||||    
T  1822055 gcgtgcttgacttggagt 1822072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 17445553 - 17445345
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || |||||||||||||||| |  |||| ||||| |||||||| ||  || |||    
T  17445553 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatccacagtta 17445454  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| |||||||||||||    
T  17445453 agcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcg 17445358  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  17445357 tgttggtttgtgg 17445345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 189117 - 189324
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||| ||||||||||  |||| ||||| |||||||||||  || ||||    
T  189117 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaactccacagttaa 189216  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     | || |||||||||||  ||||||  |||| |||||| | | |||||||   |    | |  || ||||||||||| ||||||| ||||||||||||||    
T  189217 gcatgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccg----gtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgt 189312  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  189313 gttggtttgtgg 189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 2193864 - 2194002
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  2193864 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 2193963  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||||||||||  ||||||  |||| ||||||    
T  2193964 agcgtgcttgacttggagcaattttgggatgggtgacct 2194002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 3886698 - 3886491
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||||||||||| ||||||| ||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  3886698 catggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 3886599  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||||||||| |||||  |||||   |||| |||||| | |  ||||||       || | ||| ||||||||||| ||||||| ||||||||||||||    
T  3886598 gcgtgtttgacgtggagcaatttttggatgggtgacctaccgggaagttt----cccagtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 3886503  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  3886502 gttggtttgtgg 3886491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 21886243 - 21886153
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||  |||| ||||| |||||||||||    
T  21886243 catggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataagaactc 21886153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 34867839 - 34867929
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| |||||||||||||||||    
T  34867839 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactc 34867929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 2474008 - 2474145
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||| | |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  2474008 catggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2474107  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgacct 163  Q
     |||| |||||||||||  ||||||  |||| ||||||    
T  2474108 gcgtgcttgacttggagcaattttgggatgggtgacct 2474145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 34371661 - 34371868
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| ||||| ||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| ||||||||| |  || ||||    
T  34371661 catggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccacagttaa 34371760  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| |||  ||||||   |    | | ||| ||||||||||| |||||||  |||||||||||||    
T  34371761 gcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgt 34371856  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  34371857 gttggtttgtgg 34371868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 238
Target Start/End: Complemental strand, 42788744 - 42788535
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||| |||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| || ||||||||  || |||    
T  42788744 acatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactccacagtta 42788645  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  || | |||||| | |  |||||| | |  |||| |    ||||||||||| ||||||| |||||||||| ||    
T  42788644 agcgtgcttgacttggagcaattttgggataggtgacctaccgggaagtttctcggtaagctt----gcgagtgaggacaaaacacgctgaaaagacccg 42788549  T
Q  225 tgttgatttgtgga 238  Q
    ||||| ||||||||    
T  42788548 tgttggtttgtgga 42788535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 34372116 - 34372316
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| ||||| ||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| ||||||||||   || |||    
T  34372116 acatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcacagtta 34372215  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  || | |||||| | |  |||||||  || ||    ||| ||||||||||| ||||||| ||||||| |||||    
T  34372216 agcgtgcttgacttggagcaattttgggattggtgacctaccgggaagttttccgataa----gcgtgcgagtgaggaaaaaacacgctgaaaatactcg 34372311  T
Q  225 tgttg 229  Q
    |||||    
T  34372312 tgttg 34372316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 235
Target Start/End: Complemental strand, 20858631 - 20858434
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||| |||||||||||||||||||||| | |   |||| || |||||||| ||||||||| ||||| ||||| |||||||||||   | ||||   || |    
T  20858631 gaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaaggttgct 20858532  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatt 232  Q
    ||||||||||  | ||||  |||| ||||||||||  ||||||| ||||||||||    || |||||||| ||||||| ||||||| |||||||||||||    
T  20858531 tgacttggagcaactttgggatgg-tgaccttctgggaagttttctgaaaagcat----gctagtgaggacaaaacacgctgaaaatactcgtgttgatt 20858437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 30719895 - 30719736
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||||||||||| ||||||||||| ||||| ||||  | ||||||||||||||||||  |||| |||   |||||||||||  ||||||| |||| |    
T  30719895 gaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacaattaagcgtgct 30719796  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgag 192  Q
      ||||||||  ||||||  | || |||| |||| |||||||| ||||||||| ||||||    
T  30719795 caacttggagcaattttgggacgggtgacattctaaaaagtttcttgaaaagcgtgcgag 30719736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 39146987 - 39147105
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||| || |||||||||||||||||  ||||| ||||  | ||||||||||||||||||| ||||  |||| |||||||||||  || |||    
T  39146987 acatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataagaactccacagtta 39147086  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  39147087 agcgtgcttgacttggagt 39147105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 8391424 - 8391212
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||| | |||||||| |||||||||||||||||| ||| | | || || ||||||||||||||||||  |||| | ||| |||||||||||       
T  8391424 agactacatgattgaaggaagacttataagaattgtttggtactcc-tgtatcaacaagatgcatcttcttttcggtagctaattccataagaactccat 8391326  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaag 219  Q
    | |||| |||| |||||||||||  ||||||  |||| |||||| | |  |||||| | || ||     || ||||||||||| ||||||| |||| |||    
T  8391325 agttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctcgataa----acgtgcgagtgaggacaaaacacgctgagaag 8391230  T
Q  220 actcgtgttgatttgtgg 237  Q
    ||||||||||||||||||    
T  8391229 actcgtgttgatttgtgg 8391212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 30684646 - 30684487
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||| ||||||||| ||||||||||| ||||  ||||  | ||||||||||||||||||  |||| |||   |||||||||||  || |||| |||| |    
T  30684646 gaagggaggcttatatgaattgtttggtactatctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgtgct 30684547  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgag 192  Q
      ||||||||  ||||||  |||| |||||||||||||||||| | ||||||| ||||||    
T  30684546 caacttggagcaattttgggatgggtgaccttctgaaaagtttctcgaaaagcgtgcgag 30684487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 3887154 - 3886947
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||| ||||| ||||| ||||| |||| || ||||||||||||||||||  |||  ||||| ||||||||||   || ||||    
T  3887154 catggttgaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataagaacttcacagttaa 3887055  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  |||||   |||| |||||| |||  ||||||       || | ||| ||||||||||| ||||||| |||| |||||||||    
T  3887054 gcgtgcttgacttggagcaatttttggatgggtgacctactgggaagttt----cccagtaagcgtgcgagtgaggacaaaacacgctgacaagactcgt 3886959  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  3886958 gttggtttgtgg 3886947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 15513093 - 15512972
Alignment:
Q  41 gcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgg 140  Q
    |||||||||||||||| || |||||  ||| || ||||||||||||||||||| |||  ||||| |||||||||||  ||||||| |||| ||||||||     
T  15513093 gcttataagaattgtt-ggtactaccaatatcaacaagatgcatcttctttttggtatctcattccataagaactccacaattaaacgtgcttgacttga 15512995  T
Q  141 agttattttgaaatggatgacct 163  Q
    ||  ||||||  |||||||||||    
T  15512994 agcaattttgggatggatgacct 15512972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 20039564 - 20039455
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||||||||||||||||||||||| ||||| |||| || |||||||||| ||| |||| ||||  |||| |||||||||||| || ||||  ||| |    
T  20039564 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttc-ttttggtagcccattccataagaactctacagttaagtgtgct 20039466  T
Q  133 tgacttggagt 143  Q
    |||||| ||||    
T  20039465 tgacttagagt 20039455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 22556585 - 22556651
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||||||||||||| ||||||||||| ||||| |||| || ||||||||||||||||||    
T  22556585 catggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcatcttctttt 22556651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 5066972 - 5066871
Alignment:
Q  42 cttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgga 141  Q
    |||||||||||||||||| | ||  |||| || |||||||||| |||||||| |||||  ||||||||| |||||  ||||||| |||||||| ||||||    
T  5066972 cttataagaattgtttggtattatctatatcaacaagatgcattttctttttggtagtctatttcataaaaactccacaattaaacgtgtttgccttgga 5066873  T
Q  142 gt 143  Q
    ||    
T  5066872 gt 5066871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 24182341 - 24182136
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| ||||||||||||||||||||| ||||| ||||  ||||||| |||||||||||||| |||  |||   ||   ||||| ||||   || ||||     
T  24182341 atggttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttc-tttcggtaccccaaaccataataacttaacagttaag 24182243  T
Q  127 cgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtg 226  Q
    |||| |||||||||||  ||||||  |||| ||||||||| |||||||| | | |||    | | |||||||||||||||||||  |||||||| |||||    
T  24182242 cgtggttgacttggagcaattttgggatgggtgaccttctaaaaagtttctcggaaa----gtgtgcgagtgaggataaaacacgttgaaaagattcgtg 24182147  T
Q  227 ttgatttgtgg 237  Q
    ||| |||||||    
T  24182146 ttggtttgtgg 24182136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 30720276 - 30720136
Alignment:
Q  107 ataagaactctgcaattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaa 206  Q
    ||||||||||| || ||||||||| ||||||||||   ||||||  ||||||||| ||||  |||| |||  ||||||| |||||||    ||||| |||    
T  30720276 ataagaactctacagttaatcgtgcttgacttggaacaattttgggatggatgactttcttgaaagctttccgaaaagcgtgcgagc----gaggacaaa 30720181  T
Q  207 acacactgaaaagactcgtgttgatttgtggaaccaatcaacaat 251  Q
    |||| |||||||||||| ||||| ||||||||  ||||| |||||    
T  30720180 acacgctgaaaagactcctgttggtttgtggagtcaatcgacaat 30720136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 175
Target Start/End: Original strand, 18304495 - 18304629
Alignment:
Q  41 gcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgg 140  Q
    |||||||  |||||||||| ||||| |||| || |||||||||| |||||||  |||| ||||| |||||||| ||  || |||| | ||||||||||||    
T  18304495 gcttatataaattgtttggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaattccacagttaagcatgtttgacttgg 18304594  T
Q  141 agttattttgaaatggatgaccttctgaaaagttt 175  Q
    ||  ||||||  |||| ||||||| ||| ||||||    
T  18304595 agcaattttgtgatgggtgaccttttgagaagttt 18304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 22557018 - 22557084
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||||||||||||| ||||||||||| |||||  ||| || ||||||||||||||||||    
T  22557018 catggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttctttt 22557084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 29680155 - 29680087
Alignment:
Q  75 caagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagt 143  Q
    ||||||||||||||||||| ||||  |||| |||||||||||  || |||| |||||||||||||||||    
T  29680155 caagatgcatcttctttttggtagcccattacataagaactccacagttaagcgtgtttgacttggagt 29680087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 1880283 - 1880330
Alignment:
Q  188 gcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  1880283 gcgagcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 1880330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 5786061 - 5786123
Alignment:
Q  197 tgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaag 259  Q
    |||||| |||||||| ||||||||||||| ||| ||||| | | |||||||||||||||||||    
T  5786061 tgaggacaaaacacattgaaaagactcgtattggtttgtaggatcaatcaacaatacttaaag 5786123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 2474160 - 2474205
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  2474160 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 2474205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 30685027 - 30684901
Alignment:
Q  107 ataagaactctgcaattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaa 206  Q
    ||||||||||| |  ||||  ||| ||||||||||   ||||||| ||||||||| ||||  ||||||||  ||||||| ||| ||||||    || |||    
T  30685027 ataagaactctacggttaagtgtgcttgacttggaacaattttgagatggatgactttcttgaaagttttccgaaaagcgtgcaagcgag----gacaaa 30684932  T
Q  207 acacactgaaaagactcgtgttgatttgtgg 237  Q
    |||| |||||||||||||||||| |||||||    
T  30684931 acacgctgaaaagactcgtgttggtttgtgg 30684901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 4658073 - 4658001
Alignment:
Q  43 ttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||||||| |||||||  ||||| |||| || ||| ||||||||||||||| ||||| |||| ||||||||||    
T  4658073 ttataagacttgtttgatactacctataacaacaacatgcatcttctttttggtagtccattccataagaact 4658001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 16370805 - 16370733
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtag 98  Q
    |||||| |||||||  |||||||||||||||||| ||||| |||| || ||||| | ||||||||||| ||||    
T  16370805 catggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttctttttggtag 16370733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 4673561 - 4673478
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||||| |||||||||||| ||||| |  || | || || |||||||||| |||||||| ||| |||||| |||||||||||    
T  4673561 gaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactc 4673478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 187769 - 187806
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttg 229  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  187769 gcgagtgaggacaaaacacgctgaaaagactcgtgttg 187806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 2194015 - 2194060
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||| ||||||| |||||||    
T  2194015 gcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtgg 2194060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 11160771 - 11160694
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataa 110  Q
    |||||||||||||||| |||||||||| ||||  |||  || |||||||||| ||||||   |||||||||| |||||    
T  11160771 gaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcatattctttcacgtagttcattccataa 11160694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 6e-31; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 28 - 237
Target Start/End: Original strand, 50347797 - 50348002
Alignment:
Q  28 tggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatc 127  Q
    |||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||| |||| ||||| |||||||||||  || |||| |    
T  50347797 tggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagc 50347896  T
Q  128 gtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgt 227  Q
    ||| |||||||||||  ||||||  |||| |||||| | || ||||||   || ||    | | ||||||||||| ||||||| ||||||||||||||||    
T  50347897 gtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttcccgataa----gtgtgcgagtgaggacaaaacacgctgaaaagactcgtgt 50347992  T
Q  228 tgatttgtgg 237  Q
    || |||||||    
T  50347993 tggtttgtgg 50348002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 31284373 - 31284166
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  31284373 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 31284274  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  |||||||  ||    || ||| ||||||| ||| ||||||| | ||||||||||||    
T  31284273 gcgtgcttgacttggagcaattttgggatgggtgacctgccgggaagttttccga----caagcgtgcgagtggggacaaaacacgccgaaaagactcgt 31284178  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  31284177 gttggtttgtgg 31284166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 13150657 - 13150444
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  |    
T  13150657 agactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccac 13150558  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaag 219  Q
    | |||| |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | | | ||||||||||| ||||||| ||||||||    
T  13150557 agttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagtgtgcgagtgaggacaaaacacgctgaaaag 13150462  T
Q  220 actcgtgttgatttgtgg 237  Q
    ||||||||||||||||||    
T  13150461 actcgtgttgatttgtgg 13150444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 32227319 - 32227111
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| ||||  | ||||||||||||||||||| |||| |||||||||||||||||  || |||    
T  32227319 acatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataagaactccacagtta 32227220  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | | | ||||||||||| |||||||| ||||||||||||    
T  32227219 agcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagtgtgcgagtgaggaaaaaacacattgaaaagactcg 32227124  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  32227123 tgttggtttgtgg 32227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 11180132 - 11179994
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| |||||||||||||||||  || |||    
T  11180132 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagtta 11180033  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||||||||||  ||||||  |||| ||||||    
T  11180032 agcgtgcttgacttggagcaattttgggatgggtgacct 11179994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 28561795 - 28562001
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  28561795 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 28561894  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  28561895 gcgtgcttgacttggagcaattttgggatgg-tgacctacggggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 28561989  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  28561990 gttggtttgtgg 28562001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 32227548 - 32227754
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| ||||  | ||||||||||||||||||  |||| |||||||||||||||||  || |||    
T  32227548 acatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagtta 32227647  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   || ||    | | ||||||||||| |||||||| ||||||||||||    
T  32227648 agcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataa----gtgtgcgagtgaggaaaaaacacattgaaaagactcg 32227743  T
Q  225 tgttgatttgt 235  Q
    ||||| |||||    
T  32227744 tgttggtttgt 32227754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 13150197 - 13149989
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| | || || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  13150197 acatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagtta 13150098  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  |||||| ||||| |||||| | |  |||||| | |    | | | | || |||||||| ||||||| |||||||||||||    
T  13150097 agcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcg----gtaagtgtgcaagtgaggacaaaacacgctgaaaagactcg 13150002  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  13150001 tgttggtttgtgg 13149989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 25230808 - 25230685
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||||| ||||||||||||||||| ||||| |||| || |||||||||| |||||||| ||||  |||| |||||||||||  |    
T  25230808 agactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaac 25230709  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    |||||| |||| ||||||||||||    
T  25230708 aattaagcgtgcttgacttggagt 25230685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 25238395 - 25238272
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||||| ||||||||||||||||| ||||| |||| || |||||||||| |||||||| ||||  |||| |||||||||||  |    
T  25238395 agactacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaac 25238296  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    |||||| |||| ||||||||||||    
T  25238295 aattaagcgtgcttgacttggagt 25238272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 20885215 - 20885097
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||| |||||||||||||||||  ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  ||||||    
T  20885215 acatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaactccacaatta 20885116  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  20885115 agcgtgcttgacttggagt 20885097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 39640980 - 39641102
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||||||| ||||||||| |||||||| ||||| |||| ||  |||||||||||||||||| |||| ||||| |||||||||||  |    
T  39640980 agactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccac 39641079  T
Q  120 aattaatcgtgtttgacttggag 142  Q
    | |||| ||||||||||||||||    
T  39641080 agttaagcgtgtttgacttggag 39641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 25238793 - 25238576
Alignment:
Q  14 agaattagacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaa 113  Q
    ||||| |||| ||||||| |||||||| |||||||||||||||||| ||||  | || || ||||||||||||||||||| ||||  |||| ||||||||    
T  25238793 agaatgagactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaa 25238694  T
Q  114 ctctgcaattaatcgtgtttgacttggagttat-tttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacac 212  Q
    |||  || |||| |||| ||||||||||||  | |||| | ||| ||||||   |  ||||||||||  ||||||    ||||||||||| ||||||| |    
T  25238693 ctccacagttaagcgtgcttgacttggagtagtctttggattgg-tgacctatcgggaagttttttggtaagcat----gcgagtgaggacaaaacacgc 25238599  T
Q  213 tgaaaagactcgtgttgatttgt 235  Q
    ||||||||||||||||| |||||    
T  25238598 tgaaaagactcgtgttggtttgt 25238576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 32386830 - 32386624
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||  |||| | ||| |||||||||||  || ||||     
T  32386830 atggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattccataagaactccacagttaag 32386731  T
Q  127 cgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtg 226  Q
    |||| |||||||||||  ||||||  |||| |||||  | | ||||||| |||    | | |||  |||||||||| ||||||| || ||||||||||||    
T  32386730 cgtgcttgacttggagcaattttgggatgggtgacccaccggaaagtttcttg----gtaagcgtccgagtgaggacaaaacacgctaaaaagactcgtg 32386635  T
Q  227 ttgatttgtgg 237  Q
    ||| |||||||    
T  32386634 ttggtttgtgg 32386624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 37 - 237
Target Start/End: Complemental strand, 27187416 - 27187219
Alignment:
Q  37 gaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgac 136  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||||  |||| |||||||||||||||||  || |||| |||| |||||    
T  27187416 gaaggcttataagaattgtttggtactacctatatcactaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgac 27187317  T
Q  137 ttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgagga-taaaacacactgaaaagactcgtgttgatttgt 235  Q
    || |||  ||||||  |||| |||||| | |  ||||||   || ||    ||| |||||||||||  ||||||| |||||||||||||||||| |||||    
T  27187316 tttgagcaattttgggatgggtgacctaccgggaagtttcccgataa----gcgtgcgagtgaggacaaaaacacgctgaaaagactcgtgttggtttgt 27187221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 4067450 - 4067340
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||| ||||||| |||||||||| ||||| |||| || ||||||||||||||||||| |||| ||||| |||||||||||  || |||| |||| |    
T  4067450 gaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacagttaagcgtgct 4067351  T
Q  133 tgacttggagt 143  Q
    |||||||||||    
T  4067350 tgacttggagt 4067340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 16811430 - 16811635
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||||||||||||||| || ||||| |||  || ||||||||||||||||||  |||| ||||| |||||||| ||  || ||||    
T  16811430 catggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatcttcttttcggtagctcattccataagaattccacagttaa 16811529  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   || ||||||    ||||||||||| |||  || ||||||||||||||    
T  16811530 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcat----gcgagtgaggacaaa--acgctgaaaagactcgt 16811623  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  16811624 gttggtttgtgg 16811635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 29224373 - 29224520
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| ||||| ||||| | ||||||||||||||||||  ||||  ||   ||||||||||   |||||||    
T  29224373 catggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaacttcacaattaa 29224472  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagt 173  Q
     |||| |||||||||||  ||||||  |||| ||||||||||| ||||    
T  29224473 gcgtgcttgacttggagcaattttgggatgggtgaccttctgagaagt 29224520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 32797033 - 32796942
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||| |||| ||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||  |||| |||||||||||    
T  32797033 acatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactc 32796942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 14814006 - 14814205
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgttt 133  Q
    ||||||||||||||| |||||||||| ||||| |||| ||  |||||||||||||||||  |||| || || |||||||||||  || |||| |||| ||    
T  14814006 aaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttcttttcggtagctcgttccataagaactccacagttaagcgtgctt 14814105  T
Q  134 gacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgattt 233  Q
    |||||||||  ||||||  |||| |||||| | |||| ||||   |    | | ||| |||||||| || ||||||| |||||||||||||||||| |||    
T  14814106 gacttggagcaattttgtgatgggtgacctaccgaaaggtttcccg----gtaagcgtgcgagtgaagacaaaacacgctgaaaagactcgtgttggttt 14814201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 14820211 - 14820410
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgttt 133  Q
    |||||||||||||||||||||||||| ||||| |||| || ||||||||||||| ||||  |||| || || |||||||||||  || |||| |||| ||    
T  14820211 aaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtgctt 14820310  T
Q  134 gacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgattt 233  Q
    ||||||||   ||||||  |||| ||||||   | |||||||   |  ||||||    || |||||||| ||||||| |||||||||||||||||| |||    
T  14820311 gacttggaacaattttgggatgggtgacctatcggaaagtttcccggtaagcat----gcaagtgaggacaaaacacgctgaaaagactcgtgttggttt 14820406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 41472350 - 41472439
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| |||||||| |||||||||||||||||| |||||||||| || ||||||||||||||||||  |||| ||||| |||||||||||    
T  41472350 catggttgaaggaag-cttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataagaactc 41472439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 236
Target Start/End: Original strand, 8067329 - 8067535
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||  |||||||||||||||||| | ||||| |||| || ||||||||||||| ||||  |||| ||||| |||||||||||   | ||||    
T  8067329 catggttgaaggccggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccatagttaa 8067428  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   || ||    ||| ||||||||||| ||||||| ||||||||||||||    
T  8067429 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataa----gcgtgcgagtgaggacaaaacacgctgaaaagactcgt 8067524  T
Q  226 gttgatttgtg 236  Q
    |||| ||||||    
T  8067525 gttggtttgtg 8067535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 30529730 - 30529825
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||| ||||||| |||| |||||||||||||||| ||||| ||||| |||| || ||||||||||||||||||| ||||  |||| ||||||||||    
T  30529730 agactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaact 30529825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 25230346 - 25230228
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| |||| || |||||| |||||||||||| ||||  ||||  ||||||||||  || |||    
T  25230346 acatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagtta 25230247  T
Q  125 atcgtgtttgacttggagt 143  Q
      |||| ||||||||||||    
T  25230246 tgcgtgcttgacttggagt 25230228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 25237933 - 25237815
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| |||| || |||||| |||||||||||| ||||  ||||  ||||||||||  || |||    
T  25237933 acatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagtta 25237834  T
Q  125 atcgtgtttgacttggagt 143  Q
      |||| ||||||||||||    
T  25237833 tgcgtgcttgacttggagt 25237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 25239173 - 25239084
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||| ||||||| ||||||||||||| ||||| ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||    
T  25239173 atggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactc 25239084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 7493930 - 7493996
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||||||||||||||||||| ||||| ||||| |||| || ||||||||||||||||||    
T  7493930 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatcttctttt 7493996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 39653213 - 39653420
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| |||||||||||||||| |  ||||| |||| || ||||||||||||||||||  |||| ||||| ||| |||||||  || ||||    
T  39653213 catggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttcttttcggtagctcattccatgagaactccacagttaa 39653312  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
      ||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | | | ||||||||||| ||||||| ||||||||||||||    
T  39653313 gtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgt 39653408  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  39653409 gttggtttgtgg 39653420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 25802635 - 25802528
Alignment:
Q  36 ggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttga 135  Q
    |||||||| |||||||| |||||| ||||| |||| || ||||||||||||||||||   |||  |||| |||||||| ||  || |||| |||||||||    
T  25802635 ggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgtttga 25802536  T
Q  136 cttggagt 143  Q
    ||||||||    
T  25802535 cttggagt 25802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 2911143 - 2911261
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||| ||| | |||||| |||||||||  | ||| |||| || |||||||||| |||||||| |||| ||||| |||||||||||  || |||    
T  2911143 acatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgcatattctttttggtagctcattccataagaactccacagtta 2911242  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  2911243 agcgtgcttgacttggagt 2911261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 7477240 - 7477306
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||||||||||||||||||| ||||| ||||| |||| || |||||| |||||||||||    
T  7477240 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttctttt 7477306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 25248168 - 25248250
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| | ||||||||||||||||| ||||| |||| || ||||||||||||||||||| ||||  |||| ||||| |||||    
T  25248168 aaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataataactc 25248250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 37045091 - 37045201
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||| ||||||||||||||||||| | ||| |||| || |||| |||||||||||||| |||    ||| |||||||||||  || |||| |||| |    
T  37045091 gaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttctttttggtaccctattccataagaactccacagttaagcgtgct 37045190  T
Q  133 tgacttggagt 143  Q
    |||||||||||    
T  37045191 tgacttggagt 37045201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 3899868 - 3899915
Alignment:
Q  45 ataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  3899868 ataagaattgtttggtactacatataccaacaagatgcatcttttttt 3899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 25803101 - 25802986
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||| ||| ||| |||||||||||||| ||||| ||||  | ||||||| ||||||||||  |||   |||||||||||||||| | | ||||    
T  25803101 catggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatcttcttttcggtatcccatttcataagaactccgtagttaa 25803002  T
Q  126 tcgtgtttgacttgga 141  Q
     |||| ||||||||||    
T  25803001 gcgtgcttgacttgga 25802986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 26310086 - 26309996
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| |||||| |  ||||||||||| ||||  |||||||||||||  |||||||||||||||| | |||| ||||| ||| |||||||    
T  26310086 catggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttctttatggtagctcattccattagaactc 26309996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 16810974 - 16811063
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||||| || |||||||||||||||||||||  | ||||  |||| |  ||||||||||||||||||  |||| ||||| ||||||||||    
T  16810974 catggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttcttttcggtagctcattccataagaact 16811063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 260
Target Start/End: Original strand, 2911295 - 2911363
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaagt 260  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||| | | ||||| ||||| ||||||||    
T  2911295 gcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtaggatcaatcgacaatgcttaaagt 2911363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 11179967 - 11179924
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||    
T  11179967 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 11179924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 37045243 - 37045286
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  37045243 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 37045286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 25231030 - 25230989
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||| ||||||| |||||||||||||||||| |||||    
T  25231030 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 25230989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 25239060 - 25239019
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||| ||||||| |||||||||||||||||| |||||    
T  25239060 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 25239019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 41473752 - 41473797
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||| ||||||| |||||||    
T  41473752 gcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtgg 41473797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 31104049 - 31103985
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtag 98  Q
    ||||||| |||||||||||||||||  ||||  ||||||| | |||||||| |||||||| ||||    
T  31104049 aaggaagacttataagaattgtttgatactatctataccaactagatgcattttctttttggtag 31103985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 237
Target Start/End: Original strand, 33771057 - 33771257
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||| |||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| |||||||||||||||||  || |||| | || |    
T  33771057 gaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcatgct 33771156  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatt 232  Q
    ||||||||||  ||||||  |||| |||||| | |  ||||||   |  ||||||    ||||||||||| |||||||||||||||||||||||||| ||    
T  33771157 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcat----gcgagtgaggacaaaacacactgaaaagactcgtgttggtt 33771252  T
Q  233 tgtgg 237  Q
    |||||    
T  33771253 tgtgg 33771257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 33175006 - 33175123
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||| |||| |||||||||||||||||  || |||    
T  33175006 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataagaactccacagtta 33175105  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  33175106 agcgtg-ttgacttggagt 33175123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 8256574 - 8256774
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  8256574 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 8256673  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| |||  |||||||  || ||    ||| ||||||||||| |||| || ||||||||||||     
T  8256674 agcgtgcttgacttggagcaattttgggatgggtgacctgctgggaagttttccgataa----gcgtgcgagtgaggacaaaatacgctgaaaagactca 8256769  T
Q  225 tgttg 229  Q
    |||||    
T  8256770 tgttg 8256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 41754338 - 41754475
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  41754338 catggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 41754437  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgacct 163  Q
     |||| |||||||||||  ||||||  |||||||||||    
T  41754438 gcgtgcttgacttggagcaattttgggatggatgacct 41754475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 30966739 - 30966947
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||| ||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  30966739 catggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 30966838  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| || ||||||||  ||||||  |||| |||||| | |  |||||| | |    | | ||| ||||||||||| |||||||  |||||||||||||    
T  30966839 gcgtgcttaacttggagcaattttgggatgggtgacctaccgggaagtttctcg----gtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgt 30966934  T
Q  226 gttgatttgtgga 238  Q
    |||| ||||||||    
T  30966935 gttggtttgtgga 30966947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 13191031 - 13191113
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  13191031 aaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactc 13191113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 25338094 - 25337887
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||   ||| |||||||||||||||||  || ||||    
T  25338094 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaa 25337995  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | | | ||||||||||| ||||||| ||||||||||||||    
T  25337994 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgt 25337899  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  25337898 gttggtttgtgg 25337887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 30966283 - 30966490
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||  ||||| |||||||||||   | ||||    
T  30966283 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaa 30966382  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| ||||||||||   ||||||  |||| |||||| | |  |||||| | |  ||||||    ||||||||||| |||||||  |||||||||||||    
T  30966383 gcgtgcttgacttggaccaattttgggatgggtgacctaccgggaagtttctcggtaagcat----gcgagtgaggacaaaacacgttgaaaagactcgt 30966478  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  30966479 gttggtttgtgg 30966490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 33174559 - 33174669
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  ||||  |||| ||||||||||| ||| |||| |||| |    
T  33174559 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtgct 33174658  T
Q  133 tgacttggagt 143  Q
    |||||||||||    
T  33174659 tgacttggagt 33174669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 16379442 - 16379559
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||| ||||||||||| ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  || ||||    
T  16379442 catggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 16379541  T
Q  126 tcgtgtttgacttggagt 143  Q
     |||||||||||||||||    
T  16379542 gcgtgtttgacttggagt 16379559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 24818383 - 24818581
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgttt 133  Q
    |||||||||||||||||||||||| | ||||| |||| || ||||||||||||| ||||  |||| ||||| |||||||||||  || |||| |||| ||    
T  24818383 aaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgctt 24818482  T
Q  134 gacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgattt 233  Q
    |||||||||  ||||||  |||| |||||| | |  ||||||  ||    | | ||| ||||||||||| ||||||| |||||||||||||||||| |||    
T  24818483 gacttggagcaattttg-gatgggtgacctaccgggaagtttcctg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttt 24818577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 29259717 - 29259510
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||||| | |||||||||| |||||||||| || ||||||||||||||||||  |||| ||||||||||||||||    | ||||    
T  29259717 catggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcatagttaa 29259618  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| ||||||| |||  ||||||  |||| |||||| | |  ||||||   |  ||||||    ||||||||||| |||||||  |||||||||||||    
T  29259617 gcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaagcat----gcgagtgaggacaaaacacgttgaaaagactcgt 29259522  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  29259521 gttggtttgtgg 29259510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 83060 - 83181
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||| | |||||||||||| |||||| ||||| ||||||| ||||||| ||||| ||||| |||| ||||| |||||||||||| |    
T  83060 agactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatgaatcttttttttggtagctcattccataagaactctac 83159  T
Q  120 aattaatcgtgtttgacttgga 141  Q
    | |||| ||||||||| |||||    
T  83160 agttaagcgtgtttgatttgga 83181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 18098981 - 18098885
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||| ||||||| ||||| | ||||||||||||||||||| ||||| |||| || ||||||||||||||||||| |||| ||||| |||||||||||    
T  18098981 agactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactc 18098885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 1707084 - 1707203
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||| | |||||||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||| ||||  ||| ||||||||||||  |    
T  1707084 agactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataagaactccac 1707183  T
Q  120 aattaatcgtgtttgacttg 139  Q
    | ||||  ||||||||||||    
T  1707184 agttaagagtgtttgacttg 1707203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 8073948 - 8074031
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||| || |||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||  ||||||||||||||||    
T  8073948 gaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactc 8074031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 27883016 - 27882906
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||| ||||||||||||||||||| | ||  |||| ||  |||||||||||||||||||||||  | || |||||||||||  ||||||| ||||||    
T  27883016 gaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttcttttttgtaggccgttccataagaactccacaattaagcgtgtt 27882917  T
Q  133 tgacttggagt 143  Q
    |||||||||||    
T  27882916 tgacttggagt 27882906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 29804730 - 29804844
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||| |||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  29804730 acatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 29804829  T
Q  125 atcgtgtttgacttg 139  Q
    | |||| ||||||||    
T  29804830 agcgtgcttgacttg 29804844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 236
Target Start/End: Complemental strand, 30963353 - 30963154
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||||||||||||||||||| || ||||| |||| || ||||||||||||| ||||| ||||  ||  ||||||||| ||  || |||| |||| |    
T  30963353 gaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttatttttggtagcccaaatcataagaattcaacagttaagcgtgct 30963254  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatt 232  Q
    ||||||||||  ||||||  |||  |||||||||   |||||| | | |||    ||| |||||||||||||||| ||  ||||||||||||||||| ||    
T  30963253 tgacttggagcaattttgggatgagtgaccttcttggaagtttctcggaaa----gcgtgcgagtgaggataaaatacgttgaaaagactcgtgttggtt 30963158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 16378986 - 16379103
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||| ||||||||||  ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  || ||||    
T  16378986 catggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 16379085  T
Q  126 tcgtgtttgacttggagt 143  Q
     |||| ||||||||||||    
T  16379086 gcgtgcttgacttggagt 16379103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 11388231 - 11388373
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||| ||||| || |||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  |    
T  11388231 agactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccac 11388329  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||| |||||||||||  ||||||  |||| ||||||    
T  11388330 agttaagcgtgcttgacttggagcaattttgggatgggtgacct 11388373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 38899015 - 38898892
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||  ||||||||||||||||||| ||||| |||| || |||||||||| |||||||| |||   ||||||||||||||||  |    
T  38899015 agactacatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacacatttcataagaactccac 38898916  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| |||| ||||||| ||||    
T  38898915 agttaagcgtgcttgacttagagt 38898892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 5399906 - 5399825
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||| ||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| ||||||||||    
T  5399906 aagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaact 5399825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 25434153 - 25434036
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||  || || | || || |||||||||||| |||| | ||||  |||| |||||||||||  || ||||    
T  25434153 catggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatctcctttctggtagcccattccataagaactccacagttaa 25434054  T
Q  126 tcgtgtttgacttggagt 143  Q
     |||| ||||||||||||    
T  25434053 gcgtgcttgacttggagt 25434036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 1912591 - 1912690
Alignment:
Q  43 ttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggag 142  Q
    ||||||||||||||||| ||||| |||| || |||||||||||||| |||| ||||  |||| |||||||||||  || |||| |||| |||||||||||    
T  1912591 ttataagaattgtttggtactacctatatcaacaagatgcatcttc-ttttggtagcccattccataagaactccacagttaagcgtgattgacttggag 1912689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 16542033 - 16542151
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttg-tagttcatttcataagaactctgcaatt 123  Q
    ||||||| |||||||| ||||||| |||||||| | ||||| |||| || ||||||| ||||| ||||||  ||| ||||| ||||| |||||| || ||    
T  16542033 acatggttgaaggaagacttataataattgttttgtactacctatatcaacaagatgtatcttttttttttatagctcattccataaaaactctacagtt 16542132  T
Q  124 aatcgtgtttgacttggag 142  Q
    ||  |||||||||||||||    
T  16542133 aaatgtgtttgacttggag 16542151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 36924519 - 36924450
Alignment:
Q  28 tggtagaaggaaggcttataagaattgtttggcactac--atataccaccaagatgcatcttcttttttg 95  Q
    |||| ||||||||||||||||||||||||||| | |||  ||||| || |||||||||||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttcttttttg 36924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 1953204 - 1953277
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagt 99  Q
    |||||| |||||||| | |||||||||||||||| ||||| |||| || | ||||||||||||||||| |||||    
T  1953204 catggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttctttttggtagt 1953277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 20502072 - 20502160
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||||| ||||||||||||||||||||||||||| |||   |||| || |||||||| |||| ||||| ||||  |||||||||||||||    
T  20502072 catggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt-tttttggtagcccatttcataagaact 20502160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 11394578 - 11394719
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||| ||||| || |||||||||| ||||| |||| || ||||||||||||||||||  |||| | ||| ||||||||||   |    
T  11394578 agactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcac 11394675  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||| |||||||||||  ||||||  |||| ||||||    
T  11394676 agttaagcgtgcttgacttggagcaattttgggatgggtgacct 11394719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 15619962 - 15620064
Alignment:
Q  41 gcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgg 140  Q
    ||||||||||||||||||| ||||| |||| || |||||| |||||||||||| | |   || | |||||||||||  ||||||| |||| ||||||| |    
T  15619962 gcttataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaactccacaattaagcgtgcttgactttg 15620061  T
Q  141 agt 143  Q
    |||    
T  15620062 agt 15620064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 32377842 - 32377797
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  32377842 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 32377797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 16379148 - 16379191
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  16379148 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 16379191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 16379600 - 16379647
Alignment:
Q  188 gcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||| ||||||||||| ||||||| |||||||||||||||||| |||||    
T  16379600 gcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 16379647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 18875955 - 18875875
Alignment:
Q  153 atggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||| ||| |||||||||||||| |||||||     || ||||||||||| ||||||||||| |||||| ||||||| |||||||    
T  18875955 atgggtgatcttctgaaaagtttcttgaaaa----tcgtgcgagtgaggacaaaacacactgtaaagacacgtgttggtttgtgg 18875875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 18448016 - 18447954
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatctt 87  Q
    ||||||| |||| ||| |||||||||||||||||| ||||| | || || |||||||||||||    
T  18448016 acatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 30963655 - 30963610
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  30963655 gcgagtgaggacaaaacacagtgaaaagactcgttttggtttgtgg 30963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 30963817 - 30963752
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttt 91  Q
    |||||| |||||||  |||||||||||||| |||  |||| |||| || |||||||||||||||||    
T  30963817 catggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttcttt 30963752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 32377651 - 32377606
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| ||||||| |||||||||| |||||||    
T  32377651 gcgagtgaggacaaaacacgctgaaaaaactcgtgttggtttgtgg 32377606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 16704569 - 16704513
Alignment:
Q  204 aaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaagt 260  Q
    ||||||| || ||||||| | |||||||| |||||| || |||||||||||||||||    
T  16704569 aaaacacgctaaaaagacacatgttgattggtggaagcattcaacaatacttaaagt 16704513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 20502175 - 20502211
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgtt 228  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  20502175 gcgagtgaggacaaaacacgctgaaaagactcgtgtt 20502211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 20850370 - 20850577
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||| | ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||| || ||||    
T  20850370 catggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactctacagttaa 20850469  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20850470 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20850565  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20850566 gttggtttgtgg 20850577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 13191610 - 13191403
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| || || ||||||||||   || ||||    
T  13191610 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataagaacttcacagttaa 13191511  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||| |||| |||||  | |  ||||||   || ||    ||| ||||||||||| |||| |||||||||||||||||    
T  13191510 gcgtgcttgacttggagcaattttgagatgggtgaccaaccgggaagtttcccgataa----gcgtgcgagtgaggacaaaatacactgaaaagactcgt 13191415  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  13191414 gttggtttgtgg 13191403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 17027628 - 17027421
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || |||||| |||||||||||  |||| |||||||||||||||||  || ||||    
T  17027628 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaa 17027529  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| | ||||||||| ||||||| ||||||||||||||    
T  17027528 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgt 17027433  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  17027432 gttggtttgtgg 17027421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 16520011 - 16520154
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||||||||||||| ||| |||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  |    
T  16520011 agactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccac 16520110  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||| |||||||||||  ||||||| |||| ||||||    
T  16520111 agttaagcgtgcttgacttggagcaattttgagatgggtgacct 16520154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 20896791 - 20896695
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||    
T  20896791 agactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactc 20896695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 1991596 - 1991832
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| | | ||||||||| ||||||||||||| | |||||||   | ||||||||||||||||||  |||| ||||||||||||||||   |    
T  1991596 agactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcac 1991695  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaag 219  Q
    | |||| | |  |||| |||||||  ||||   |||| |||||||||||||||||||  |||||||||    | |||||| || |||  || |||||||     
T  1991696 agttaaacattattgatttggagtagtttttggatgggtgaccttctgaaaagttttccgaaaagcat----gtgagtgaagacaaagtacgctgaaaaa 1991791  T
Q  220 actcgtgttgatttgtggaaccaatcaacaatacttaaagt 260  Q
    |||||||||||||||||| | || ||||||||| |||||||    
T  1991792 actcgtgttgatttgtgggatcagtcaacaatatttaaagt 1991832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 3652534 - 3652625
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||| ||||||||||||||||||||||| ||  ||||| |||| || ||||||||||||||||||| |||||||||| |||||||||||    
T  3652534 acatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttctttttggtagttcattccataagaactc 3652625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 6331015 - 6330892
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||||||| |||||||||||||||||| ||||| |||| || ||| ||||||||||||||  |||| |||||||||||||||||  |    
T  6331015 agactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttcttttcggtagctcatttcataagaactccac 6330916  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| |||| ||||||| ||||    
T  6330915 agttaagcgtgcttgactttgagt 6330892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 20126285 - 20126162
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||||||||||||||||||| |||||  ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||| ||  |    
T  20126285 agactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaattccac 20126186  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    |||||| |||| ||||||||||||    
T  20126185 aattaagcgtgcttgacttggagt 20126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 11062333 - 11062451
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||| ||||| | ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  || |||    
T  11062333 acatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagtta 11062432  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  11062433 agcgtgcttgacttggagt 11062451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 13492838 - 13492975
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||||||| |||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  13492838 catggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 13492937  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgacct 163  Q
     |||| ||||||| |||  ||||||  |||| ||||||    
T  13492938 gcgtgcttgacttagagcaattttgggatgggtgacct 13492975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 21312020 - 21312136
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||| ||||  ||||||||||||| ||   | ||||    
T  21312020 catggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcataagaaatccatagttaa 21312119  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  21312120 acgtgcttgacttggag 21312136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 7911927 - 7912134
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||  |||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||     
T  7911927 catggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttat 7912026  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     | || |||||||||||  ||||||  |||| |||||| | |  ||| || | |  ||||||    ||||||||||| ||||||| ||||||||||| ||    
T  7912027 gcttgcttgacttggagcaattttgggatgggtgacctaccgggaagattctcggtaagcat----gcgagtgaggacaaaacacgctgaaaagacttgt 7912122  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  7912123 gttggtttgtgg 7912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 238
Target Start/End: Original strand, 23776489 - 23776697
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||| ||||||||||| || ||| ||||| |||| || ||||||||||||||||||  |||| |||||||||||||||| |   ||||    
T  23776489 acatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaact-tcacatta 23776587  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||  |||||||||||  ||||||  ||||||||||| |||  ||||||  |    || |  || |||||||| || ||||||| ||||||||| |||    
T  23776588 agcgtacttgacttggagcaattttgggatggatgacctactgggaagtttcct----agtaaacgtgcgagtgacgacaaaacacgctgaaaagattcg 23776683  T
Q  225 tgttgatttgtgga 238  Q
    ||||| ||||||||    
T  23776684 tgttggtttgtgga 23776697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 23986415 - 23986207
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||| ||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||  |||| |||   ||||||||||   || |||    
T  23986415 acatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataagaacttcacagtta 23986316  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    |  ||| |||||||||||  ||||||  |||| ||||||||||  ||||||   | |||    ||| ||||||||||| || |||| ||||||||||| |    
T  23986315 agtgtgcttgacttggagcaattttgggatgggtgaccttctgggaagtttcacggaaa----gcgtgcgagtgaggagaagacacgctgaaaagacttg 23986220  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  23986219 tgttggtttgtgg 23986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 7912359 - 7912566
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||  |||||| ||||||||||| ||||| |||| || |||||||||| |||||||  |||| ||||| |||||||||||   | ||||    
T  7912359 catggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataagaactccatagttaa 7912458  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  |||||| ||||| |||||| |||  ||||||   |  ||    |||  |||||||||| ||||||| |||||||||||| |    
T  7912459 acgtgcttgacttggagcaattttggaatgggtgacctgctgggaagtttcccgttaa----gcgtacgagtgaggacaaaacacgctgaaaagactcat 7912554  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  7912555 gttggtttgtgg 7912566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 27334210 - 27334300
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||| ||||||||||  |||| ||||| |||||||||||    
T  27334210 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactc 27334300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 27394950 - 27395040
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||| ||||||||||  |||| ||||| |||||||||||    
T  27394950 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactc 27395040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 2681313 - 2681209
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||| |||| |||||||||||||||||| |||||  ||| || ||||||||||||||||||  |||| ||||| |||||||||||  |||||||    
T  2681313 catggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacaattaa 2681214  T
Q  126 tcgtg 130  Q
     ||||    
T  2681213 gcgtg 2681209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 9352105 - 9352318
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||| || ||||||| | |||||||| ||||| ||||  | ||||||||||||||||||  |||| ||||| |||||||||||  |    
T  9352105 agactacatggtcgaagggagacttataatatttgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccac 9352204  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaag 219  Q
    | |||| |||| |||||||||||  ||||||  |||| |||||| |    |||||| | |    | | ||| ||||||||||| ||||||  ||||||||    
T  9352205 agttaagcgtgcttgacttggagcaattttgggatgggtgacctacctggaagtttctcg----gtaagcgtgcgagtgaggacaaaacatgctgaaaag 9352300  T
Q  220 actcgtgttgatttgtgg 237  Q
    |||||||||| |||||||    
T  9352301 actcgtgttggtttgtgg 9352318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 15929630 - 15929738
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||| ||||||||||||||||| ||||| ||||| |||| || ||| ||||||||||||||  |||| ||||| |||||||||||  || |||    
T  15929630 acatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagtta 15929729  T
Q  125 atcgtgttt 133  Q
    | |||||||    
T  15929730 agcgtgttt 15929738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 17851434 - 17851540
Alignment:
Q  37 gaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgac 136  Q
    ||||||||||||||  ||||||| ||||| | || || ||||||||||||||||||| ||||  ||||  ||||||||||  ||||||| |||| |||||    
T  17851434 gaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattctataagaactccacaattaagcgtgcttgac 17851533  T
Q  137 ttggagt 143  Q
    |||||||    
T  17851534 ttggagt 17851540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 163
Target Start/End: Original strand, 13492393 - 13492518
Alignment:
Q  38 aaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgact 137  Q
    |||||||||||||||||||||  | ||| |||| || ||||||||||||||||||  |||| | ||| |||||||||||  || |||| |||| ||||||    
T  13492393 aaggcttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtgcttgact 13492492  T
Q  138 tggagttattttgaaatggatgacct 163  Q
    |||||  ||||||  |||| ||||||    
T  13492493 tggagcaattttgggatgggtgacct 13492518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 21311564 - 21311681
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| | ||| || |  | |||||| |||||||||||| | || ||||| ||||||||||| ||| ||||    
T  21311564 catggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccatcttctttttggaagctcattccataagaactccgcagttaa 21311663  T
Q  126 tcgtgtttgacttggagt 143  Q
     |||| ||||||| ||||    
T  21311664 gcgtgcttgactttgagt 21311681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 31821795 - 31821704
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataag 111  Q
    |||| ||||||| ||||||| ||||||||||||| ||||| ||||  |||| || ||||||||||||| ||||| |||| ||||| ||||||    
T  31821795 agactacatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatcttttttttggtagctcattccataag 31821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 2720661 - 2720543
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttttt-gtagttcatttcataagaactctgcaatta 124  Q
    |||||| |||||||| |||||||||||||||||| ||||| ||||  | |||||  |||||| |||||| |||| ||||| |||||||||||  || |||    
T  2720661 catggttgaaggaagacttataagaattgtttggtactacctatattaacaagacacatctttttttttggtagctcattccataagaactccacagtta 2720562  T
Q  125 atcgtgtttgacttggagt 143  Q
    |  ||| ||||||||||||    
T  2720561 agtgtgcttgacttggagt 2720543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 14771816 - 14771726
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| |||||||| |||||||||||||||||| ||||| |||| || |||||| ||| |||||||| ||| |  ||| |||||||||||    
T  14771816 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactc 14771726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 2890936 - 2890823
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||| |||||||||||||| || ||||| |||| ||  ||||||| |||||||||  ||||  |||| |||||||||||  || ||||    
T  2890936 catggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattccataagaactccacagttaa 2890837  T
Q  126 tcgtgtttgacttg 139  Q
     |||| ||||||||    
T  2890836 gcgtgcttgacttg 2890823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 12194406 - 12194515
Alignment:
Q  55 tttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagttattttgaaat 154  Q
    ||||||||||  |||| || |||||||||||||||||||| || |||||| |||||||||||  || |||| | |||||||| |||||  |||||   ||    
T  12194406 tttggcactatctatatcaacaagatgcatcttcttttttataattcattccataagaactccacagttaagcatgtttgacatggagcaattttaggat 12194505  T
Q  155 ggatgacctt 164  Q
    ||||||||||    
T  12194506 ggatgacctt 12194515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 20735753 - 20735810
Alignment:
Q  35 aggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    ||||||||||||||||||||||||  ||||| |||| || ||||||||||||||||||    
T  20735753 aggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttctttt 20735810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 27334305 - 27334349
Alignment:
Q  193 cgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  27334305 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtgg 27334349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 27395045 - 27395089
Alignment:
Q  193 cgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  27395045 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtgg 27395089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 33775101 - 33774986
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaaga--tgcatcttcttttttgtagttcatttcataagaactctgcaatt 123  Q
    |||||| ||||||||| ||||||||||||| |||  |||| |||| || |||||  ||||||||||||||  |||| |||| |||||||||||  || ||    
T  33775101 catggttgaaggaaggattataagaattgtctggtgctacctatatcaacaagagatgcatcttctttttgatagtccattccataagaactccacagtt 33775002  T
Q  124 aatcgtgtttgacttg 139  Q
    ||  ||||||||||||    
T  33775001 aagtgtgtttgacttg 33774986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 235
Target Start/End: Complemental strand, 17731202 - 17731001
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccacca----agatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgt 129  Q
    ||||||| |||||||||||||||||| ||||| |||| || ||    ||||||||||||||||  |||| |||||   |||||||||  || |||| |||    
T  17731202 aaggaagacttataagaattgtttggtactacctatatcaacaagatagatgcatcttcttttcggtagctcattctttaagaactccacatttaagcgt 17731103  T
Q  130 gtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttg 229  Q
    | |||||||||||  ||||||| || | |||||| | | ||||||| | |    | | ||| || |||||||| ||||||| || |||||||||||||||    
T  17731102 gcttgacttggagcaattttgagataggtgacctaccggaaagtttatcg----gtaagcgtgcaagtgaggacaaaacacgctaaaaagactcgtgttg 17731007  T
Q  230 atttgt 235  Q
     |||||    
T  17731006 gtttgt 17731001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 20126117 - 20126074
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  20126117 gcgagtgaggacaaaacacactgaaaagactcgtgttggtttgt 20126074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 32292934 - 32293001
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttt 93  Q
    |||||| ||| ||||||||||||||||||||||| ||||| ||||||| ||| || |||||| |||||    
T  32292934 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatcttgttttt 32293001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 9440406 - 9440317
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||||| ||| ||| |||||||||||||||| || ||||| |||| || |||||||||| |||||||  |||| ||| | ||||||||||    
T  9440406 catggttgaatgaaagcttataagaattgttcggtactacttatatcaacaagatgcattttcttttcggtagctcactccataagaact 9440317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 28780209 - 28780366
Alignment:
Q  76 aagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttt 175  Q
    |||||||||||| ||||  |||| ||||| |||||||||||  || |||| |||| |||||||||||  ||||||  |||| |||||| | |  ||||||    
T  28780209 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttt 28780308  T
Q  176 tttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    | ||  |||  |||||    ||||||||||||||   ||||||||||||||||| |||||||    
T  28780309 tctggtaagtgtgcga----gtgaggataaaacattttgaaaagactcgtgttggtttgtgg 28780366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 9440955 - 9440888
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    ||||||| ||||||| ||||||||||||| ||||| ||||| | || || |||||||||| |||||||    
T  9440955 acatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttctttt 9440888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 33470935 - 33470998
Alignment:
Q  75 caagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgactt 138  Q
    |||||||||| ||||||||||||||||||| |||||||| ||  || |||  ||||||||||||    
T  33470935 caagatgcatattcttttttgtagttcattacataagaattccacagttatgcgtgtttgactt 33470998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 28065920 - 28065820
Alignment:
Q  41 gcttataagaattgtttggcactacatataccaccaagatgcatcttctttttt---gtagttcatttcataagaactctgcaattaatcgtgtttgact 137  Q
    ||||||||||||||||||| ||||  | || || ||||||||||||| ||||||   |||| | ||| |||||||||||  ||||||| | |||||||||    
T  28065920 gcttataagaattgtttggtactatctctatcaacaagatgcatctttttttttttggtagcttattccataagaactccacaattaagcatgtttgact 28065821  T
Q  138 t 138  Q
    |    
T  28065820 t 28065820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 15929242 - 15929339
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactct 117  Q
    |||| ||| ||| |||| || ||||||||||||||||||| | | | |||| ||  ||||||||| |||||||  |||| ||||| ||||||||||||    
T  15929242 agactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattcttttcggtagctcattccataagaactct 15929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 20896610 - 20896577
Alignment:
Q  204 aaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||||||||||||||||||||||||| |||||||    
T  20896610 aaaacacactgaaaagactcgtgttggtttgtgg 20896577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20054177 - 20053970
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20054177 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054078  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||| ||||  ||||||  |||| |||||| | |  ||||||| ||    | | ||| ||||||||||| ||||||  ||||||||||||||    
T  20054077 gcgtgcttgactaggagcaattttgggatgggtgacctaccgggaagttttctg----gtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgt 20053982  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20053981 gttggtttgtgg 20053970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20054633 - 20054426
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20054633 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054534  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20054533 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20054438  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20054437 gttggtttgtgg 20054426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20055089 - 20054882
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20055089 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054990  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20054989 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20054894  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20054893 gttggtttgtgg 20054882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20055545 - 20055338
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20055545 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20055446  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20055445 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20055350  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20055349 gttggtttgtgg 20055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20056001 - 20055794
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20056001 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20055902  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20055901 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20055806  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20055805 gttggtttgtgg 20055794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20056457 - 20056250
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20056457 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20056358  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20056357 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20056262  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20056261 gttggtttgtgg 20056250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20057360 - 20057153
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20057360 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20057261  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20057260 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20057165  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20057164 gttggtttgtgg 20057153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 16907283 - 16907491
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||| || |||||| |||||||||||  || || ||||  | ||||||||   | ||||    
T  16907283 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctacaagaactccatagttaa 16907382  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     ||||||||||||||||  ||||||| |||| ||||||| ||| |||||| ||||||||||||| ||  |   |||| |||| |||||| ||||||||||    
T  16907383 gcgtgtttgacttggagcaattttgagatgggtgaccttttgagaagtttcttgaaaagcatgcaagtaa---aggacaaaatacactggaaagactcgt 16907479  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  16907480 gttggtttgtgg 16907491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 16452031 - 16451823
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| |||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||||||||| |||||||||||  || |||    
T  16452031 acatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagtta 16451932  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| | | ||||||||   | ||    ||| ||| |||| || ||||||| |||||||||||||    
T  16451931 agcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataa----gcgtgcgcgtgatgacaaaacacgctgaaaagactcg 16451836  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  16451835 tgttggtttgtgg 16451823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 16461184 - 16460976
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| |||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||||||||| |||||||||||  || |||    
T  16461184 acatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagtta 16461085  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| | | ||||||||   | ||    ||| ||| |||| || ||||||| |||||||||||||    
T  16461084 agcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataa----gcgtgcgcgtgatgacaaaacacgctgaaaagactcg 16460989  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  16460988 tgttggtttgtgg 16460976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 237
Target Start/End: Complemental strand, 20056906 - 20056706
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||||||||| |||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||| ||||||    
T  20056906 gaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtt 20056807  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatt 232  Q
    ||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| |||||||||||||||||| ||    
T  20056806 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtt 20056711  T
Q  233 tgtgg 237  Q
    |||||    
T  20056710 tgtgg 20056706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20057816 - 20057609
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20057816 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20057717  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20057716 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20057621  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20057620 gttggtttgtgg 20057609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20845758 - 20845551
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||  ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  20845758 catggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20845659  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  20845658 gcgtgcttgacttggagaaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 20845563  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  20845562 gttggtttgtgg 20845551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 46693831 - 46693625
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| |||||||||||||||| |||||||||| ||||| |||| || ||||||||||||||||||  |||  ||||||||||| |||||  || ||||     
T  46693831 atggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaag 46693732  T
Q  127 cgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtg 226  Q
    |||| |||||||||||  ||||||  |||| |||||| | | |||||||   |    | ||||| ||||||||||| ||||||| |||||||||| ||||    
T  46693731 cgtgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccg----gtatgcgtgcgagtgaggacaaaacacgctgaaaagacccgtg 46693636  T
Q  227 ttgatttgtgg 237  Q
    ||| |||||||    
T  46693635 ttggtttgtgg 46693625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 52250254 - 52250462
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  52250254 acatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 52250353  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||| ||  |||||| ||||| |||||| | |  ||||||   |    | | | | ||||||||||| ||||||| |||||||||||||    
T  52250354 agcgtgcttgacttgaagcaattttggaatgggtgacctaccgggaagtttcccg----gtaagtgtgcgagtgaggacaaaacacgctgaaaagactcg 52250449  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  52250450 tgttggtttgtgg 52250462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 35759705 - 35759506
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| ||||||||||    | ||||    
T  35759705 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaa 35759606  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| ||||||||||| |||||||  || | |||||| | |  |||||||| |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  35759605 acgtgcttgacttggagctattttgggattggtgacctaccgggaagtttttcg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 35759510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 50002804 - 50002597
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| |||||   |||||||||   | ||||    
T  50002804 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccatagttaa 50002705  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     ||||||||||||||||  ||||||  ||||||||||| | |  |||||    |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  50002704 gcgtgtttgacttggagcaattttgggatggatgacctaccgggaagttccccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 50002609  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  50002608 gttggtttgtgg 50002597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 35761011 - 35760895
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||| |||| ||||| ||| ||||||| | | ||||    
T  35761011 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgagaactccgtagttaa 35760912  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  35760911 gcgtgcttgacttggag 35760895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 43057626 - 43057503
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||  ||||  |||| |||||||||||  |    
T  43057626 agactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccac 43057527  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| |||| ||||||||||||    
T  43057526 agttaagcgtgattgacttggagt 43057503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 229
Target Start/End: Original strand, 38340955 - 38341154
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || |||||||||||||| |||  |||| ||||| ||||||||||   || ||||    
T  38340955 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataagaacttcacagttaa 38341054  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| |||  ||||||   |    | | ||| ||||||||||| ||||||| | ||||||||||||    
T  38341055 gcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgcggaaaagactcgt 38341150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 50002383 - 50002292
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||| ||||||||||||||||||||||||||| ||||| | || || ||||||||||||||||||  |||| ||||| |||||||||||    
T  50002383 acatggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactc 50002292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 2328364 - 2328454
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||| ||||  |||| |||||||||||    
T  2328364 catggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataagaactc 2328454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 20061288 - 20061198
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||    
T  20061288 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactc 20061198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 175
Target Start/End: Original strand, 2739587 - 2739720
Alignment:
Q  42 cttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgga 141  Q
    |||||||||||||||| |||||||||||| || ||| ||| |||||||||||| ||||  ||| ||||||||||      ||||  ||||||||||| ||    
T  2739587 cttataagaattgtttagcactacatatatcaacaatatgtatcttcttttttatagtctattccataagaacttcatggttaagtgtgtttgactttga 2739686  T
Q  142 gttattttgaaatggatgaccttctgaaaagttt 175  Q
    |  ||||||| |||||||||||||||||||||||    
T  2739687 gcaattttgatatggatgaccttctgaaaagttt 2739720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 20060430 - 20060322
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||  ||| |    
T  20060430 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgct 20060331  T
Q  133 tgacttgga 141  Q
    |||||||||    
T  20060330 tgacttgga 20060322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 2634992 - 2635090
Alignment:
Q  45 ataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagt 143  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||  |||| |||||  ||||||||||  || |||| |||||||| ||||||||    
T  2634992 ataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagctcattcaataagaactccacagttaagcgtgtttggcttggagt 2635090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 43057163 - 43057045
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||| ||||||||||||  ||||| |||| || ||||||||||||||||||  ||||  |||| |||||||||||  || |||    
T  43057163 acatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagtta 43057064  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||| ||||    
T  43057063 agcgtgattgacttagagt 43057045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 30873046 - 30872934
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| |||||||| ||| |||||||||||||  ||||| |||| || ||||||||||||||||||| ||||| ||||  ||||||||||  |||||||     
T  30873046 atggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatcttctttttggtagtccattctataagaactccacaattaag 30872947  T
Q  127 cgtgtttgacttg 139  Q
    | || ||||||||    
T  30872946 catgcttgacttg 30872934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 51372970 - 51372834
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| ||||||||||||||||||||||||| | ||||| |||| |  ||||||||||||| ||||  |||| ||||| |||||||||||  || ||||     
T  51372970 atggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatcttattttcggtagctcattccataagaactccacagttaag 51372871  T
Q  127 cgtgtttgacttggagttattttgaaatggatgacct 163  Q
    |||| ||||||| |||  ||||||  |||| ||||||    
T  51372870 cgtgcttgactttgagcaattttgggatgggtgacct 51372834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 12728035 - 12728158
Alignment:
Q  21 gacaacatggtagaaggaaggcttataagaattgtttgg-cactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    ||||||||||| |||||||| ||||||||||||||||||  ||| | |||| || ||||||||||||||||||  ||||  |||| |||||||||||  |    
T  12728035 gacaacatggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactccac 12728134  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| | || ||||||||||||    
T  12728135 agttaagcatgcttgacttggagt 12728158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 12883580 - 12883710
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||  |||||||||||||||||| ||||| |||| || |||||||||| |||||||| |||| ||||| ||||| |||||  || ||||  |||||    
T  12883580 gaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaaaactccacagttaagtgtgtt 12883679  T
Q  133 tgacttggagttattttgaaatggatgacct 163  Q
    ||||||| |||  ||||   |||||||||||    
T  12883680 tgacttgaagtagtttttggatggatgacct 12883710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 31822766 - 31822645
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||||  ||||||||||| ||||| |||||||||| || ||| ||||||||||||||  |||| ||| | || ||||||||  |    
T  31822766 agactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaagaactccac 31822667  T
Q  120 aattaatcgtgtttgacttgga 141  Q
    | |||| ||| |||||||||||    
T  31822666 agttaagcgtttttgacttgga 31822645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 7548148 - 7548257
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgttt 133  Q
    ||||||| ||||||| |||||||||| | ||  |||| || |||||||||| |||||||| ||||  ||||| ||||||||||  ||||||| |||  ||    
T  7548148 aaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataagaactccacaattaagcgtactt 7548247  T
Q  134 gacttggagt 143  Q
    ||||||||||    
T  7548248 gacttggagt 7548257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 23180781 - 23180930
Alignment:
Q  28 tggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatc 127  Q
    |||| ||||||| | |||||||||||| |||| ||||| |||| || ||||||| ||||||| ||   |||  |||| |||||||| ||  ||||||| |    
T  23180781 tggttgaaggaatgattataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattccacaattaagc 23180880  T
Q  128 gtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttt 177  Q
    ||| |||||||||||  ||||||  |||| | |||||||| |||||||||    
T  23180881 gtgcttgacttggagaaattttgggatgggttaccttctggaaagttttt 23180930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 50003156 - 50002965
Alignment:
Q  42 cttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgga 141  Q
    ||||||| ||||||| || ||||| |||| || ||||||||||||||||||  |||| ||||| || |||||||   || |||| |||| ||||||||||    
T  50003156 cttataataattgttgggtactacctatatcaacaagatgcatcttcttttcagtagctcattccaaaagaacttcacagttaagcgtgcttgacttgga 50003057  T
Q  142 gttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |  |||||   |||| |||||| | |  ||||||   |  |||| ||||||    |||||| ||||||| |||||||||||||||||| |||||||    
T  50003056 gcaatttttggatgggtgacctaccgggaagtttcccggtaagcgtgcgag----tgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 50002965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 31823054 - 31823009
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  31823054 gcgagtgaggacaaaacatgctgaaaagactcgtgttgatttgtgg 31823009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 7547848 - 7547891
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    |||||| |||| |||||||||||||||| |||||||||||||||    
T  7547848 gcgagtaaggacaaaacacactgaaaagtctcgtgttgatttgt 7547891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 2634523 - 2634581
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||||||||  ||||||||||||| ||||  ||||| | ||||||||||||||||||    
T  2634523 aaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttctttt 2634581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 35760004 - 35759954
Alignment:
Q  187 tgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||| ||||| ||||| ||||||| |||||||||||||||||| |||||||    
T  35760004 tgcgtgcgagcgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 35759954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 10820640 - 10820709
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttttt 94  Q
    ||||||| ||||||||  ||||||||||||||||| ||||| |||| ||  ||||| |||||| ||||||    
T  10820640 acatggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatcttttttttt 10820709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 52250754 - 52250799
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||||||| || ||||||| |||||||||||||||||| |||||||    
T  52250754 gcgagtgaagacaaaacacgctgaaaagactcgtgttggtttgtgg 52250799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 52251091 - 52251136
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||||||| || ||||||| |||||||||||||||||| |||||||    
T  52251091 gcgagtgaagacaaaacacgctgaaaagactcgtgttggtttgtgg 52251136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 52250641 - 52250705
Alignment:
Q  75 caagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttg 139  Q
    ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |||| ||||||||    
T  52250641 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 52250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 52250978 - 52251042
Alignment:
Q  75 caagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttg 139  Q
    ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |||| ||||||||    
T  52250978 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttg 52251042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 275
Target Start/End: Complemental strand, 2308 - 2062
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| | ||| |||||||||||   | |||    
T  2308 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactcaatagtta 2209  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| | |  |||||||  |    | | ||| ||||||||||| |||||||| ||||||||||||    
T  2208 agcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttccg----gtaagcgtgcgagtgaggacaaaacacattgaaaagactcg 2113  T
Q  225 tgttgatttgtggaaccaatcaacaatacttaaagttatctgggaagttac 275  Q
    ||||| |||||||   || || ||||| || |||||| ||||||| |||||    
T  2112 tgttggtttgtggggtcagtcgacaatcctaaaagttgtctgggatgttac 2062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 2148 - 1941
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  2148 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2049  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| |||| || ||||||||||||||    
T  2048 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaatacgctgaaaagactcgt 1953  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  1952 gttggtttgtgg 1941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 19015 - 19222
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || |||||| |||||||||||  |||| |||||||||||||||||  || ||||    
T  19015 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaa 19114  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| | ||||||||| ||||||| ||||||||||||||    
T  19115 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgt 19210  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  19211 gttggtttgtgg 19222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 1269 - 1476
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  1269 catggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 1368  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  1369 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgt 1464  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  1465 gttggtttgtgg 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 42515587 - 42515800
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| ||||||||||||||||||| ||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  |    
T  42515587 agactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccac 42515686  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgaccttc-tgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaa 218  Q
    | |||| |||| |||||||||||  ||||||  |||| |||||| | || ||| |||   | ||     ||| ||||||||||| ||||||| |||||||    
T  42515687 agttaagcgtgcttgacttggagcaattttgggatgggtgacctacatggaaattttccggtaa-----gcgtgcgagtgaggacaaaacacgctgaaaa 42515781  T
Q  219 gactcgtgttgatttgtgg 237  Q
    ||||||||||| |||||||    
T  42515782 gactcgtgttggtttgtgg 42515800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 236
Target Start/End: Complemental strand, 2941854 - 2941648
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  2941854 catggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2941755  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| ||||||||||||||    
T  2941754 gcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggagaaaacacgctgaaaagactcgt 2941659  T
Q  226 gttgatttgtg 236  Q
    |||| ||||||    
T  2941658 gttggtttgtg 2941648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 36422300 - 36422417
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| |||||||||||||||||  || |||    
T  36422300 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagtta 36422399  T
Q  125 atcgtgtttgacttggag 142  Q
    | |||| |||||||||||    
T  36422400 agcgtgcttgacttggag 36422417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 2189193 - 2189309
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   ||| |||||||||||||||||  || ||||    
T  2189193 catggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaa 2189292  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  2189293 gcgtgcttgacttggag 2189309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 28495902 - 28496110
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||| |||| || ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  28495902 acatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 28496001  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| ||||||  ||  ||||||   |    | | ||| ||||||||||| ||||||| |||||||||||||    
T  28496002 agcgtgcttgacttggagcaattttgggatgggtgacctattgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcg 28496097  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  28496098 tgttggtttgtgg 28496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 34405689 - 34405481
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || || |||||||||||||||  |||| ||||| |||||||||||  || |||    
T  34405689 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttcttttcggtagctcattccataagaactccacagtta 34405590  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| ||||||||||| ||||||| |||||||||| ||    
T  34405589 agcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagacccg 34405494  T
Q  225 tgttgatttgtgg 237  Q
    |||||||||||||    
T  34405493 tgttgatttgtgg 34405481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 35474224 - 35474101
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||| ||| |||||||||||||||| | ||||| |||| || ||||||||||||||||||| |||| ||||| |||||||||||  |    
T  35474224 agactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatcttctttttggtagctcattccataagaactccac 35474125  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| |||||||||||||||||    
T  35474124 agttaagcgtgtttgacttggagt 35474101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 2193305 - 2193512
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||| ||  |||| |||||||||| ||||||  || ||||    
T  2193305 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacagttaa 2193404  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||| ||||||  ||||||  |||| |||||| | |  ||||||   |    | | ||| | ||||||||| ||||||| ||||||||||||||    
T  2193405 gcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgt 2193500  T
Q  226 gttgatttgtgg 237  Q
    ||||||||||||    
T  2193501 gttgatttgtgg 2193512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 2465781 - 2465919
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||| |||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  2465781 acatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagtta 2465880  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||||||||||  ||||||  |||| ||||||    
T  2465881 agcgtgcttgacttggagcaattttgggatgggtgacct 2465919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 13125233 - 13125096
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  13125233 catggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 13125134  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgacct 163  Q
     |||| |||||||||||  ||||||  |||| ||||||    
T  13125133 gcgtgcttgacttggagcaattttgggatgggtgacct 13125096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 6719172 - 6719049
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||   | |||    
T  6719172 acatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccagagtta 6719073  T
Q  125 atcgtgtttgacttggagttattt 148  Q
    | |||| |||||||||||| ||||    
T  6719072 agcgtgcttgacttggagtaattt 6719049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 9125016 - 9125215
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgttt 133  Q
    |||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |||| ||    
T  9125016 aaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgctt 9125115  T
Q  134 gacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgattt 233  Q
    |||| ||||  ||||||  |||| |||||| | |  |||||||  |    | | ||| ||||||||||| ||||||  |||||||||||||||||| |||    
T  9125116 gactcggagcaattttgggatgggtgacctaccgggaagttttccg----gtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggttt 9125211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 42515148 - 42515258
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||| |||||||||||||||||| ||||| |||| || |||||||||| |||||||| |||| ||||| |||||||||||  || |||| |||| |    
T  42515148 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataagaactccacagttaagcgtgct 42515247  T
Q  133 tgacttggagt 143  Q
    |||||||||||    
T  42515248 tgacttggagt 42515258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 2465972 - 2466089
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||| |||||||| ||||| |||| || |||| |||||||||||||  |||| ||||| |||||||||||  || |||    
T  2465972 acatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctcattccataagaactccacagtta 2466071  T
Q  125 atcgtgtttgacttggag 142  Q
    | |||| |||||||||||    
T  2466072 agcgtgcttgacttggag 2466089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 5406685 - 5406485
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||  ||||||||||||||||| | ||| |||| || ||||||||||||| ||||| || |  ||   |||||||||||  || ||||    
T  5406685 catggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaactccacagttaa 5406586  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| ||||||| |||  ||||||  ||||||||| ||||| ||||||||  ||||   |  || ||||||||||| ||||||||||||||| ||||||    
T  5406585 gcgtgcttgactttgagcaattttgggatggatgactttctggaaagttttccgaaa---aaacgtgcgagtgaggacaaaacacactgaaaacactcgt 5406489  T
Q  226 gttg 229  Q
    ||||    
T  5406488 gttg 5406485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 11517479 - 11517387
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    ||||||||||||||||||||||||||| ||||| |||| || |||||||||||| |||||  |||| ||||| ||||||||||| ||| ||||    
T  11517479 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatctacttttcggtagctcattccataagaactccgcagttaa 11517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 679873 - 679982
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||||||||||||||||||| || ||||| |||| || |||||||||| |||||||| ||||  |||| |||||||||||  || |||| |||| |    
T  679873 gaaggaaggcttataagaattgtt-ggtactacctatatcaacaagatgcatattctttttggtagcccattccataagaactccacagttaagcgtgct 679971  T
Q  133 tgacttggagt 143  Q
    |||||||||||    
T  679972 tgacttggagt 679982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 18833335 - 18833542
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| || |||| ||||||| ||||||||| | ||||| |||| || ||||||||||||||||||  |||| | ||| |||||||||||  || ||||    
T  18833335 catggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttcttttcggtagctaattacataagaactccacagttaa 18833434  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||||||||||| |||  ||||||  |||| |||||| | |  ||||||   |    | |  || ||||||||||| ||||||| ||||||||||||||    
T  18833435 gcgtgtttgactttgagcaattttgggatgggtgacctaccgggaagtttcccg----gtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgt 18833530  T
Q  226 gttgatttgtgg 237  Q
    ||||||||||||    
T  18833531 gttgatttgtgg 18833542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 29039118 - 29039000
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||| | ||||||| ||||||||||||| ||||| |||| || ||| |||||||||||||||  || | |||| |||||||||||| || |||    
T  29039118 acatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttctttttgataatccattccataagaactctacattta 29039019  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  29039018 agcgtgcttgacttggagt 29039000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 2611748 - 2611659
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||| ||||||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||| ||||  ||||  ||||||||||    
T  2611748 atggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataagaactc 2611659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 6747696 - 6747623
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtag 98  Q
    ||||||| ||||||||| ||||||||||||||||| ||||| |||| || ||||||||||||||||||| ||||    
T  6747696 acatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtag 6747623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 237
Target Start/End: Original strand, 7646514 - 7646671
Alignment:
Q  76 aagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttt 175  Q
    |||||||||||| ||||  |||  ||||| |||||||||||  || |||| |||| |||||||||||  ||||||  |||| |||||| | | |||||||    
T  7646514 aagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttt 7646613  T
Q  176 tttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |  || ||    ||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  7646614 tccgataa----gcgtgcgagtgaggacaaaacacactgaaaagactcgtgttggtttgtgg 7646671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 275
Target Start/End: Original strand, 36422593 - 36422676
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaagttatctgggaagttac 275  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||   || || ||||| || ||||| |||||||| |||||    
T  36422593 gcgagtgaggacaaaacacactgaaaagactcgtgttgatttgtggggtcagtcgacaatgctaaaagtaatctgggatgttac 36422676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 22529333 - 22529215
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||| ||||||| ||||  ||||  | ||||||||||||||||||  |||  ||||| || |||||||   || |||    
T  22529333 acatggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcattacaaaagaacttcacagtta 22529234  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||||||||||||||||    
T  22529233 agcgtgtttgacttggagt 22529215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 28495706 - 28495568
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||| |||||||||||||||  |   ||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  28495706 acatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatcttcttttaggtagctcattccataagaactccacagtta 28495607  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||||||||||  ||||||  |||| ||||||    
T  28495606 agcgtgcttgacttggagcaattttgggatgggtgacct 28495568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 46425789 - 46425907
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||  |||||||||||||||||||||| | ||| |||| || ||||||||||||||||||  |||  | ||| |||||||||||  || |||    
T  46425789 acatggttgaaataaggcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactccacagtta 46425888  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  46425889 agcgtgcttgacttggagt 46425907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 25182410 - 25182527
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| ||||| |||| || |||||| |||||| ||||  |||  ||||| ||||||||||   || ||||    
T  25182410 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaacttcacagttaa 25182509  T
Q  126 tcgtgtttgacttggagt 143  Q
      ||||||||||||||||    
T  25182510 gtgtgtttgacttggagt 25182527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 29357553 - 29357348
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| | ||||||||||||||||| ||||  |||| || ||||||||||||||||||   |||  | |||||||||||||   || ||||    
T  29357553 catggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataagaactacacagttaa 29357454  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||||||||||| ||||  | || | ||||||||||||| |  |||||  | |||||    ||| ||||||||| | ||| |||  |||||||||||||    
T  29357453 ccgtgtttgacttagagtagtcttaagatggatgaccttccggtaagttcctcgaaaa----gcgtgcgagtgagaacaaagcacgttgaaaagactcgt 29357358  T
Q  226 gttgatttgt 235  Q
    |||| |||||    
T  29357357 gttggtttgt 29357348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 7461317 - 7461258
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaat 251  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| | ||||| |||||    
T  7461317 gcgagtgaagataaaacacgctgaaaagactcgtgttgatttgtgggatcaatcgacaat 7461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 9623257 - 9623371
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||||||||||   |||||||||||||||||  || || |||| || |||||||||||||| |||  ||||||||||  ||||||||||  || ||||    
T  9623257 catggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagttcattctataagaactccacagttaa 9623355  T
Q  126 tcgtgtttgacttgga 141  Q
     |||||||||||||||    
T  9623356 gcgtgtttgacttgga 9623371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 35527216 - 35527101
Alignment:
Q  28 tggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatc 127  Q
    |||| ||| |||||||||||||||||||||||  |||| |||| || |||||||||| |||||||  ||||| |||| |||| ||||||  || |||| |    
T  35527216 tggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagtagtccattccataggaactccacagttaagc 35527117  T
Q  128 gtgtttgacttggagt 143  Q
     || ||||||||||||    
T  35527116 atgcttgacttggagt 35527101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 26421401 - 26421287
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| |||||||| ||||||||||||| |||  ||||| |||| || |||||||||| || ||||  ||||| |||| |||||||||||  || ||||     
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacagttaaa 26421302  T
Q  127 cgtgtttgacttgga 141  Q
    ||||||||| |||||    
T  26421301 cgtgtttgaattgga 26421287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 36015508 - 36015442
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||||| ||||| ||||||||||||| |||||||||| || |||||||| |||||||||    
T  36015508 catggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttctttt 36015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 11372501 - 11372590
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||| ||||||||||||||||||||||||||| ||||| | ||||| || ||||||| || ||||| |||| |||   |||||||||||    
T  11372501 atggttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcatgttatttttggtagctcaaaccataagaactc 11372590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 260
Target Start/End: Complemental strand, 3305283 - 3305215
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaagt 260  Q
    ||||||||| | ||||||| |||||||||||||||||||||||| | | || ||| |||||||||||||    
T  3305283 gcgagtgagaacaaaacacgctgaaaagactcgtgttgatttgtaggatcagtcagcaatacttaaagt 3305215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 37672221 - 37672321
Alignment:
Q  38 aaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgact 137  Q
    |||| |||||| |||||||||| ||||| | ||||| ||||||||| |||||||||  ||||| |||||||||||| |   || |||| |||||||||||    
T  37672221 aaggtttataataattgtttggtactacttgtaccaacaagatgcaacttctttttgttagttgatttcataagaaatacacagttaagcgtgtttgact 37672320  T
Q  138 t 138  Q
    |    
T  37672321 t 37672321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 6719010 - 6718965
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||    
T  6719010 gcgagtgaggacaaaacacactgaaaagaatcgtgttggtttgtgg 6718965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 7646526 - 7646368
Alignment:
Q  75 caagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagtt 174  Q
    ||||||||||||||||||  |||| ||||| ||||||||||   || |||| |||| |||||||||||  ||||||  |||| |||||| | |  |||||    
T  7646526 caagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtt 7646427  T
Q  175 ttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    | | |    | | | | ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  7646426 tctcg----gtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 7646368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 26421857 - 26421768
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||||| |||| |||||| |||||||||||| || ||| | ||||||| ||||||| ||||||||||  ||||  |||| ||||||||||    
T  26421857 catggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagcccattccataagaact 26421768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 36422462 - 36422507
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  36422462 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 36422507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 43233168 - 43233213
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  43233168 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 43233213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 7461398 - 7461331
Alignment:
Q  75 caagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagt 143  Q
    |||||| |||||||||||| |||||||| |||||||||||||| || |||| ||||||| |||| ||||    
T  7461398 caagatacatcttctttttggtagttca-ttcataagaactctacagttaagcgtgtttaacttagagt 7461331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 2189357 - 2189400
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||    
T  2189357 gagtgaggacaaaacacgctgagaagactcgtgttgatttgtgg 2189400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 2611594 - 2611551
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  2611594 gcgagtgaggacaaaacactctgaaaagactcgtgttggtttgt 2611551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 6748011 - 6747968
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  6748011 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 6747968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 13122568 - 13122465
Alignment:
Q  60 cactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagttattttgaaatggatg 159  Q
    |||||||||||  | ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |||| |||| ||||||  ||||||  |||| ||    
T  13122568 cactacatatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtg 13122469  T
Q  160 acct 163  Q
    ||||    
T  13122468 acct 13122465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 31743921 - 31743834
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaa 113  Q
    |||||| ||||||| |||||||||||| ||||||  |||  |||| || ||||||||||||||||||  ||||  |||| ||||||||    
T  31743921 catggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttcttttcggtagcccattccataagaa 31743834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 16192379 - 16192457
Alignment:
Q  37 gaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    ||||| ||||||||||||||||| | ||| || | || |||||||||||||| |||| ||||  |||| ||||||||||    
T  16192379 gaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaact 16192457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 43233470 - 43233528
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    ||||||| |||||||||||||||||| ||||  |||| || ||||||||||||| ||||    
T  43233470 aaggaagacttataagaattgtttggtactatctatatcaacaagatgcatcttttttt 43233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 26957655 - 26957610
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatata 70  Q
    ||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  26957655 acatggttgaaagaaggcttataagaattgtttggtactacctata 26957610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 28495554 - 28495509
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||| | |||||||||||||||||| |||||||    
T  28495554 gcgagtgaggacaaaacccgctgaaaagactcgtgttggtttgtgg 28495509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 23942881 - 23942763
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||  |||| |||||||||||  || |||    
T  23942881 acatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagtta 23942782  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  23942781 agcgtgcttgacttggagt 23942763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 49998685 - 49998892
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  49998685 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 49998784  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     ||||||||||||||||  ||||||  |||| |||||| | |  ||||||   |    | | | | ||||||||||| ||||||| ||||||||||||||    
T  49998785 gcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttcccg----gtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgt 49998880  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  49998881 gttggtttgtgg 49998892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 50399085 - 50398967
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || || |||||||||||||||  |||| ||||| |||||||||||  || |||    
T  50399085 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataagaactccacagtta 50398986  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||||||||||||||||    
T  50398985 agcgtgtttgacttggagt 50398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 12692090 - 12691953
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  12692090 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 12691991  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgacct 163  Q
     |||| |||||||||||  ||||||  |||| ||||||    
T  12691990 gcgtgcttgacttggagcaattttgggatgggtgacct 12691953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 23350374 - 23350167
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||| ||| | |||| || ||||||||||||||||||  |||| || || ||||||||||    | ||||    
T  23350374 catggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatcttcttttcggtagctccttccataagaacttcatagttaa 23350275  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttt-tttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
     |||| |||||||||||  ||||||  ||||||||||| | || |||||| | || ||     ||| | ||||||||| |||||||||||||||||||||    
T  23350274 gcgtgcttgacttggagcaattttgggatggatgacctaccgagaagtttctctgtaa-----gcgtgtgagtgaggacaaaacacactgaaaagactcg 23350180  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  23350179 tgttggtttgtgg 23350167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 43929052 - 43928943
Alignment:
Q  28 tggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatc 127  Q
    |||| ||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||  ||||||| |    
T  43929052 tggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtt-atttcataagaaatccacaattaaac 43928954  T
Q  128 gtgtttgactt 138  Q
    ||| |||||||    
T  43928953 gtgcttgactt 43928943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 50398630 - 50398512
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||   | |||    
T  50398630 acatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagtta 50398531  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  50398530 agcgtgcttgacttggagt 50398512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 51331373 - 51331255
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||||||||||||||||||||||| ||||  |||| || |||||| |||||||||||  |||| |||||||||||||||||  || |||    
T  51331373 acatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatacatcttcttttcggtagctcatttcataagaactccacagtta 51331274  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  51331273 agcgtgcttgacttggagt 51331255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 31817943 - 31817854
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||||| |||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||||  ||||| |||||||||||||||    
T  31817943 catggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaact 31817854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 44471422 - 44471279
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||||||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||  |    
T  44471422 agactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccac 44471323  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    | |||| |||| |||| ||||||  ||||||  |||| ||||||    
T  44471322 agttaagcgtgcttgatttggagcaattttgggatgggtgacct 44471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 176
Target Start/End: Original strand, 1464212 - 1464346
Alignment:
Q  42 cttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttgga 141  Q
    |||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||||||||||||||   ||||| | |||| || |||||||    
T  1464212 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcacaatttagcgtgcttaacttgga 1464311  T
Q  142 gttattttgaaatggatgaccttctgaaaagtttt 176  Q
    |  ||||||  |||| ||||||||||| |||||||    
T  1464312 gcaattttgggatgggtgaccttctgagaagtttt 1464346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 1645841 - 1645723
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||| |||||||||||||||||| | ||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  || |||    
T  1645841 acatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagtta 1645742  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  1645741 agcgtgcttgacttggagt 1645723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 21220421 - 21220306
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| ||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||| |||  |||||  |||||||||   || ||||     
T  21220421 atggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataagaactacacagttaag 21220322  T
Q  127 cgtgtttgacttggag 142  Q
    ||||||||||||||||    
T  21220321 cgtgtttgacttggag 21220306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 275
Target Start/End: Original strand, 33764903 - 33765154
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| | | |||| ||| ||||||||||||||  |||| ||||||| |||||||||||||||||||||||| |||||| |||||||||   |    
T  33764903 agactacatggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcac 33765002  T
Q  120 aattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagtttttt-gaaaagcatgcgagcgagtgaggataaaacacactgaaaa 218  Q
    | |||| |||| |||| |||||   ||||||  |||| |||| |||| |  ||||||||  ||||||||| ||||    ||||  |||||||||| ||||    
T  33765003 acttaagcgtgcttgatttggatcaattttgggatgggtgactttct-aggagttttttcaaaaagcatgtgagc----gaggtcaaaacacactaaaaa 33765097  T
Q  219 gactcgtgttgatttgtggaaccaatcaacaatacttaaagttatctgggaagttac 275  Q
    ||||||||||| ||||||    ||||| ||||| |||||||| || ||||| |||||    
T  33765098 gactcgtgttggtttgtgaggtcaatcgacaatgcttaaagtcatatgggacgttac 33765154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 7678714 - 7678576
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||||||  |||| | ||| |||||||||||  || |||    
T  7678714 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacagtta 7678615  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgacct 163  Q
    |  ||| |||||||||||  ||||||  |||| ||||||    
T  7678614 agtgtgcttgacttggagcaattttgggatgggtgacct 7678576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 4127979 - 4127773
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  ||||   ||| ||||||||||    | ||||     
T  4127979 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaacttcagagttaag 4127880  T
Q  127 cgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtg 226  Q
    |||| ||| ||| |||  ||||||  |||| |||||| | ||||||||||  |    | | ||| | ||||||||| ||||||| |||||||||||||||    
T  4127879 cgtgcttggcttagagcaattttgggatgggtgacctaccgaaaagttttccg----gtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtg 4127784  T
Q  227 ttgatttgtgg 237  Q
    ||| |||||||    
T  4127783 ttggtttgtgg 4127773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 8467897 - 8467825
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||| ||||||| |||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  8467897 agactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttctttt 8467825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 163
Target Start/End: Complemental strand, 24629055 - 24628931
Alignment:
Q  39 aggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgactt 138  Q
    ||||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| || || |||||||||||  || |||| |||| |||||||    
T  24629055 aggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtgcttgactt 24628956  T
Q  139 ggagttattttgaaatggatgacct 163  Q
    ||||  ||||||  |||| ||||||    
T  24628955 ggagcaattttgggatgggtgacct 24628931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 50814899 - 50814779
Alignment:
Q  43 ttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggag 142  Q
    ||||||||||||||||| ||||  |||| || ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |||| |||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 50814800  T
Q  143 ttattttgaaatggatgacct 163  Q
      ||||||  |||||||||||    
T  50814799 caattttgggatggatgacct 50814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 4127521 - 4127438
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||||| |||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||| ||||| |||||||||||    
T  4127521 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactc 4127438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 3169254 - 3169372
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||| ||||||| |||||||||| ||||| |||| || ||||||||||||||||||| |||   || | |||||||||||  || |||    
T  3169254 acatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactccacactta 3169353  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  3169354 agcgtgcttgacttggagt 3169372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 17628560 - 17628626
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||| ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttctttt 17628626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 23943334 - 23943216
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||| ||||||| || | ||||| ||||| |||| || ||||||||||||||||||| ||||  |||| |||||||||||  || |||    
T  23943334 acatggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagtta 23943235  T
Q  125 atcgtgtttgacttggagt 143  Q
    | |||| ||||||||||||    
T  23943234 agcgtgcttgacttggagt 23943216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 35871677 - 35871883
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||| ||||||||||| || || |||| || |||||||||| |||||||  |||| ||||| |||||||||||  || ||||    
T  35871677 catggttgaaggaaggcttatatgaattgtttggtaccacctatatcaacaagatgcat-ttcttttcggtagctcattccataagaactccacagttaa 35871775  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgt 225  Q
     |||| |||||||||||  ||||||  |||| ||||||   | |||||||   |    | |  || ||||||||||| ||||||| ||||||||||||||    
T  35871776 gcgtgcttgacttggagcaattttgggatgggtgacctatcggaaagtttcccg----gtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgt 35871871  T
Q  226 gttgatttgtgg 237  Q
    |||| |||||||    
T  35871872 gttggtttgtgg 35871883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 53996207 - 53996089
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| |||||||| |||||||||| ||||| |||| || |||||| |||||||||||| |||  ||||| |||||||||||  || |||    
T  53996207 acatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaactccacagtta 53996108  T
Q  125 atcgtgtttgacttggagt 143  Q
    |  ||| ||||||||||||    
T  53996107 agtgtgcttgacttggagt 53996089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 31817489 - 31817376
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||| | |||||| |||||||||| ||||| ||||||| ||| ||||||||||||||  | ||  |||| | |||||||||| |||||||    
T  31817489 catggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttcttttccgcagcccattccttaagaactctacaattaa 31817390  T
Q  126 tcgtgtttgacttg 139  Q
     |||||||||||||    
T  31817389 gcgtgtttgacttg 31817376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 44470964 - 44470829
Alignment:
Q  27 atggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaat 126  Q
    ||||| ||| ||||||||||||||||||||||| ||||| |||| || |||||||||||||| | || |||  ||||| |||||||||||  || ||||     
T  44470964 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc-tgttcgtaactcattccataagaactccacagttaag 44470866  T
Q  127 cgtgtttgacttggagttattttgaaatggatgacct 163  Q
    |||| |||||||||||  ||||||  |||| ||||||    
T  44470865 cgtgcttgacttggagcaattttgggatggttgacct 44470829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 29628764 - 29628642
Alignment:
Q  20 agacaacatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgc 119  Q
    |||| ||||||| |||||||| |||||||||||||||||| ||||| |||| || |||||||  |||| | ||| ||||  |||| |||||||||||  |    
T  29628764 agactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgtgtctt-tgtttggtagcccattccataagaactccac 29628666  T
Q  120 aattaatcgtgtttgacttggagt 143  Q
    | |||| |||||||||||||||||    
T  29628665 agttaagcgtgtttgacttggagt 29628642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 275
Target Start/End: Original strand, 4185782 - 4186007
Alignment:
Q  44 tataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagt 143  Q
    |||||||||||||||  || |||||||||| ||||||||||||||||||| |||| |||||  | ||||||||| || ||||   || |||||||||||     
T  4185782 tataagaattgtttgataccacatataccaacaagatgcatcttctttttggtagctcattctacaagaactctacagttaagtatgcttgacttggagc 4185881  T
Q  144 tattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaa 243  Q
     ||||||  || | ||||||| ||  || ||| | |||||    ||| | || |||||| |||||||||| |||||||| ||||| ||||||||   ||     
T  4185882 aattttgggataggtgaccttatgcgaaatttctcgaaaa----gcgtgtgaatgaggacaaaacacactaaaaagact-gtgttaatttgtgg-gtcag 4185975  T
Q  244 tcaacaatacttaaagttatctgggaagttac 275  Q
    ||||||||||||||||| || ||||| |||||    
T  4185976 tcaacaatacttaaagtcatttgggatgttac 4186007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 14572242 - 14572176
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttt 91  Q
    ||||||| ||||| ||||||||||||||||||||| ||||| |||| || |||||||||||||||||    
T  14572242 acatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttt 14572176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 24629516 - 24629387
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgttt 133  Q
    |||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||||||  |||  || || |||||||| ||  || |||| |||| ||    
T  24629516 aaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataagaattccacagttaagcgtgctt 24629417  T
Q  134 gacttggagttattttgaaatggatgacct 163  Q
    |||||||||  ||||||  |||| ||||||    
T  24629416 gacttggagcaattttgggatgggtgacct 24629387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 9423949 - 9423862
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaa 113  Q
    |||||| ||| |||||||||||| |||||||||| ||||| |||| || ||||||||||||||||| | ||||  |||| ||||||||    
T  9423949 catggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctttctagtagcccattccataagaa 9423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 13613988 - 13613874
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||||||||||   |||||||||||||||||  || || |||| || |||||||||||||| |||  ||||||||||  ||||||||||  || ||||    
T  13613988 catggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagttcattctataagaactccacagttaa 13613890  T
Q  126 tcgtgtttgacttgga 141  Q
     |||||||||||||||    
T  13613889 gcgtgtttgacttgga 13613874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 27029333 - 27029416
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||||| |||||||||||| ||||| ||||| |||| || ||||||||||||||||||  ||||  |||| |||||||||||    
T  27029333 gaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttcttttcggtagcccattccataagaactc 27029416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 14351844 - 14351994
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||||||| ||||| || ||||| ||||  |||| || ||||||||||||||||||| |||    ||| |||||||||||  || ||||    
T  14351844 catggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttctttttggtatcctattccataagaactccacagttaa 14351943  T
Q  126 tcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagtttt 176  Q
     |||||||||||| ||||  | ||   ||||||||||| ||| ||||||||    
T  14351944 gcgtgtttgacttcgagtagtctttggatggatgacctactgcaaagtttt 14351994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 14571812 - 14571746
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||| | ||||||||||||||||||| ||||| |||| || ||||||||||||||||||    
T  14571812 catggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 14571746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 27026559 - 27026640
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    ||||||||||||||||||||||||||  ||||| |||| || ||||||||||||| ||||| ||||  |||| ||||||||||    
T  27026559 gaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagcccattccataagaact 27026640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 34554493 - 34554567
Alignment:
Q  41 gcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaact 115  Q
    |||||||||||||||||| |||||| ||||||| |||||||||| || ||||| ||||  |||| ||||||||||    
T  34554493 gcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaact 34554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 21067331 - 21067448
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| || |||| |||| ||||| |||||||||| || |||||||||||||||||   |||| |||||  | ||| ||||  |||||||    
T  21067331 catggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttctttccggtagctcattctaaaagtactccacaattaa 21067430  T
Q  126 tcgtgtttgacttggagt 143  Q
     |||| ||||||||||||    
T  21067431 gcgtgcttgacttggagt 21067448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 23976303 - 23976242
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttttt 94  Q
    ||||||||  ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  23976303 gaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttctttttt 23976242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 5810047 - 5810090
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  5810047 gagtgaggataaaacacgctgaaaagactcatgttgatttgtgg 5810090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 15268102 - 15268057
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  15268102 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 15268057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 42838680 - 42838824
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatctt-cttttttg-tagttcatttcataagaactctg-caattaatcgtg 130  Q
    ||||||| | ||||| |||||||||| ||||| |||| || ||| ||||||||| |||||| | ||||||||| |||||||||| |  || |||| ||||    
T  42838680 aaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctttctttttcgatagttcattccataagaactttcacagttaagcgtg 42838779  T
Q  131 tttgacttggagttattttgaaatggatgaccttctgaaaagttt 175  Q
    |||||||| ||   ||  || ||||||||||||||| ||||||||    
T  42838780 tttgacttagaacaataatggaatggatgaccttctaaaaagttt 42838824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 4127345 - 4127302
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||    
T  4127345 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 4127302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 4414316 - 4414273
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    |||||| |||| |||||||||||||||||||||||||| |||||    
T  4414316 gcgagtcaggacaaaacacactgaaaagactcgtgttggtttgt 4414273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 20306241 - 20306191
Alignment:
Q  37 gaaggcttataagaattgtttggcactacatataccaccaagatgcatctt 87  Q
    ||||||||||||||||||||||| ||||  |||| || |||||||||||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 29628582 - 29628540
Alignment:
Q  193 cgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||||||| || ||||||| ||||||||||||||||    
T  29628582 cgagtgaggataaaatacgctgaaaaaactcgtgttgatttgt 29628540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 40607143 - 40607189
Alignment:
Q  193 cgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaa 239  Q
    |||||||||| |||| || ||||||| ||||||||||||||||||||    
T  40607143 cgagtgaggacaaaatacgctgaaaaaactcgtgttgatttgtggaa 40607189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 23091590 - 23091537
Alignment:
Q  38 aaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttt 91  Q
    ||||| ||||| |||||||||| ||||||||||  | |||||||||||||||||    
T  23091590 aaggcgtataaaaattgtttggtactacatatattaacaagatgcatcttcttt 23091537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 24629365 - 24629320
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| |||||||||||||||||  |||||||    
T  24629365 gcgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtgg 24629320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 27578215 - 27578178
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttg 229  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  27578215 gcgagtgaggacaaaacacgctgaaaagactcgtgttg 27578178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 33294930 - 33294893
Alignment:
Q  79 atgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||||||||||||||||||||| | |||||||||||    
T  33294930 atgcatcttcttttttgtagttcactccataagaactc 33294893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 35477871 - 35477916
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||| ||||| ||||||| |||||||||||||||||| |||||||    
T  35477871 gcgagagaggacaaaacacgctgaaaagactcgtgttggtttgtgg 35477916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 52048740 - 52048668
Alignment:
Q  43 ttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||||||||||||  ||||| ||||| | ||||||||||||||  |||||||  ||||| |||||||||||    
T  52048740 ttataagaattgtttgatactacgtatactaacaagatgcatcttc-attttgtaagtcattccataagaactc 52048668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 260
Target Start/End: Complemental strand, 44470804 - 44470736
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaagt 260  Q
    ||||||||||| ||||||| ||| |||||||||||||| ||||| |   || |||||||| ||||||||    
T  44470804 gcgagtgaggacaaaacacgctggaaagactcgtgttggtttgtagggtcagtcaacaattcttaaagt 44470736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 229
Target Start/End: Complemental strand, 17696 - 17496
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| ||||||| ||||||||||||||||||| ||||| |||| || || |||| ||||||||||| |||| ||| |||||||||||||  || |||    
T  17696 acatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaactccacagtta 17597  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| ||||||||||||  | ||   |||| |||||| ||  ||||||||| |    | | ||| ||||||||||| ||||||| |||||||||||||    
T  17596 agcgtgcttgacttggagtactctttggatgggtgacctactcgaaagtttttcg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcg 17501  T
Q  225 tgttg 229  Q
    |||||    
T  17500 tgttg 17496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 260
Target Start/End: Complemental strand, 18224 - 18002
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    |||||||| |||||||||||||||||  ||||| |||| || ||||||||||||| ||||| |||| | ||| |||||||||||  || |||| |||| |    
T  18224 gaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagctaattccataagaactccacagttaagcgtgct 18126  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatt 232  Q
    |||||||||||  | ||   |||| ||||||  || ||||||||| |    | |  || ||||||||||| | ||||| |||||||||||||||||||||    
T  18125 tgacttggagtagtctttggatgggtgacctattggaaagtttttcg----gtaaacgtgcgagtgaggacacaacacgctgaaaagactcgtgttgatt 18030  T
Q  233 tgtggaaccaatcaacaatacttaaagt 260  Q
    ||| |   ||||| ||||| ||||||||    
T  18029 tgtagggtcaatcgacaatgcttaaagt 18002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 229
Target Start/End: Original strand, 105776 - 105968
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||||||||||||||||||||||| ||||| |||| || ||| ||||||||||||||  |||| ||||| |||||||||||  || |||| |||| |    
T  105776 gaaggaaggcttataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 105875  T
Q  133 tgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttg 229  Q
    ||||||||||  ||||||  |||  |||||| | || ||||||  ||    | | ||| ||||||||||| ||||||| ||||||||||||||||||    
T  105876 tgacttggagcaattttgggatgtgtgacctaccgagaagtttcctg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttg 105968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 154805 - 155013
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| | || || ||||||||||||||||||  |||| ||||| |||||||||||  || |||    
T  154805 acatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagtta 154904  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  |||||| ||||| |||||| | |  |||||| | |    | | | | || |||||||| ||||||| |||||||||||||    
T  154905 agcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcg----gtaagtgtgctagtgaggacaaaacacgctgaaaagactcg 155000  T
Q  225 tgttgatttgtgg 237  Q
    ||||| |||||||    
T  155001 tgttggtttgtgg 155013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 154513 - 154558
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  154513 gcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtgg 154558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 9e-24; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 162775 - 162659
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| |||||||| |||||||||||||||||| ||||| ||||  | ||||||||||||||||||  |||| ||||| ||||||||||| ||| ||||    
T  162775 catggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccgcagttaa 162676  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  162675 gcgtgcttgacttggag 162659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 163068 - 163024
Alignment:
Q  193 cgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||    
T  163068 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 163024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 69905 - 69822
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||| |||||||| |||||||||| ||||| |||| || || |||||||||| ||||   ||| ||||| |||||||||||    
T  69905 gaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccataagaactc 69822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 163282 - 163325
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  163282 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 163325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 2790 - 2998
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaatta 124  Q
    ||||||| |||||||||||||||||||||||| || ||||| |||| || |||||||||| |||||||  |||| ||||| |||||||||||  || |||    
T  2790 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagtta 2889  T
Q  125 atcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcg 224  Q
    | |||| |||||||||||  ||||||  ||||  ||||| | |  ||||||   |    | | | | ||||||||||| ||||||| |||||||||||||    
T  2890 agcgtgcttgacttggagcaattttgggatgggagacctaccgggaagtttcccg----gtaagtgtgcgagtgaggacaaaacacgctgaaaagactcg 2985  T
Q  225 tgttgatttgtgg 237  Q
    |||||||||||||    
T  2986 tgttgatttgtgg 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 10357 - 10555
Alignment:
Q  34 aaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgttt 133  Q
    |||||||||||||||||||||||| | ||||| |||| || ||||||||||||| ||||  |||| ||||| |||||||||||  || |||| |||| ||    
T  10357 aaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgctt 10456  T
Q  134 gacttggagttattttgaaatggatgaccttctgaaaagttttttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgattt 233  Q
    |||||||||  ||||||  |||| |||||| | |  ||||||  ||    | | ||| ||||||||||| ||||||| |||||||||||||||||| |||    
T  10457 gacttggagcaattttg-gatgggtgacctaccgggaagtttcctg----gtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttt 10551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 107560 - 107444
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaa 125  Q
    |||||| ||||||||||||||||||||||||||  |||||  ||| || ||||||||||||||||||  |||| ||||| |||||||||||  || ||||    
T  107560 catggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 107461  T
Q  126 tcgtgtttgacttggag 142  Q
     |||| |||||||||||    
T  107460 gcgtgcttgacttggag 107444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 47; Significance: 8e-18; HSPs: 4)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 4610 - 4700
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    |||||| ||||||||| ||| ||||||||||||| ||||| |||| || ||||||||||||||||||  |||| |||||| ||||||||||    
T  4610 catggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattttataagaactc 4700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 5091 - 5186
Alignment:
Q  47 aagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggag 142  Q
    ||||||||||||| ||||| ||||  | ||||||||||||||||||  |||| |||||||||||||||||  || |||| |||| || ||||||||    
T  5091 aagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttaacttggag 5186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 4771 - 4814
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  4771 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 4814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 5231 - 5274
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  5231 gcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 5274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 2153 - 2244
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||| ||||||||||||||||||||||||||| ||| | ||||  | ||||||||||||||||||| ||||  |||| | |||||||||    
T  2153 acatggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactc 2244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 2307 - 2350
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgt 235  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  2307 gcgagtgaggagaaaacacgctgaaaagactcgtgttggtttgt 2350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 23722 - 23785
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttct 89  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| || |||||||||||||||    
T  23722 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 245134 - 245200
Alignment:
Q  25 acatggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttt 91  Q
    ||||||| ||||| ||||||||||||||||||||| ||||| |||| || |||||||||||||||||    
T  245134 acatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttt 245200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 245564 - 245630
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttctttt 92  Q
    |||||| ||||| | ||||||||||||||||||| ||||| |||| || ||||||||||||||||||    
T  245564 catggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 245630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 4072 - 3988
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactct 117  Q
    ||||||| ||||||||||||||||||| ||||| | || || ||||||||||||||||||| ||||  ||||| |||||| ||||    
T  4072 gaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttctttttggtagcccattttataagagctct 3988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 13581 - 13423
Alignment:
Q  75 caagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtttgacttggagttattttgaaatggatgaccttctgaaaagtt 174  Q
    ||||||||||||||||||  |||| ||||| |||||||||||  || |||| |||| ||||||| |||  ||||||  |||| |||||| | |  |||||    
T  13581 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtt 13482  T
Q  175 t-tttgaaaagcatgcgagcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    | |||| ||     ||| ||||||||||| ||||||| |||||||||||||||||| |||||||    
T  13481 tctttgtaa-----gcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 13423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 142371 - 142304
Alignment:
Q  26 catggtagaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttt 93  Q
    |||||| ||||||| | ||||||||||||||||| ||||| |||| || |||||||||||||||||||    
T  142371 catggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttcttttt 142304  T

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Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 26133 - 26209
Alignment:
Q  40 ggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactc 116  Q
    ||||||||  |||| ||||| |||||||||| || || |||||||||||||||| |||| |||||| ||||||||||    
T  26133 ggcttatacaaattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaactc 26209  T

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Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 14797 - 14907
Alignment:
Q  33 gaaggaaggcttataagaattgtttggcactacatataccaccaagatgcatcttcttttttgtagttcatttcataagaactctgcaattaatcgtgtt 132  Q
    ||||||| ||||||||||||||||||| | ||| |||| ||  |||||||||| ||||||  ||| ||||||  |||||||||   || |||| | ||||    
T  14797 gaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtcttttcggtaattcattgaataagaacttcacagttaagcatgtt 14896  T
Q  133 tgacttggagt 143  Q
    |||||||||||    
T  14897 tgacttggagt 14907  T

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Target: scaffold0126 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 37248 - 37182
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtggaaccaatcaacaatacttaaa 258  Q
    ||||||||||  ||||||| ||||||||| |||||||| ||||| |  |||||||||||||||||||    
T  37248 gcgagtgagggaaaaacacgctgaaaagattcgtgttggtttgtagggccaatcaacaatacttaaa 37182  T

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Target: scaffold0217 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 523 - 566
Alignment:
Q  194 gagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||    
T  523 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 566  T

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Target: scaffold0277 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 14637 - 14592
Alignment:
Q  192 gcgagtgaggataaaacacactgaaaagactcgtgttgatttgtgg 237  Q
    ||||||||||| ||||||  |||||||||||||||||| |||||||    
T  14637 gcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtgg 14592  T

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