View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15600_low_9 (Length: 286)
Name: NF15600_low_9
Description: NF15600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15600_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 5 - 266
Target Start/End: Original strand, 25715713 - 25715974
Alignment:
| Q |
5 |
aagtacaactttattttagcgtttaagaaagtcgtaaactgcatattgttcaacttttcttcataatatatgctgtagtcatgcaaagtcatatatgacg |
104 |
Q |
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| T |
25715713 |
aagtacaactttattttagcgtttaagaaagtcgtaaactgcatagtgttcaacttttcttcataatatatgctgtagtcatgcaaagtcatatatgacg |
25715812 |
T |
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| Q |
105 |
aaaataccatatattagcgtttacaattttaaatattaatccttcaacaaaataaaattaaatataaagattctagaagacaaagtcggtagtgataata |
204 |
Q |
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| T |
25715813 |
aaaataccatatatttgcgtttacaattttaaatattaatccttcaacaaaataaaattaaatataaagattctagaagacaaagtcggtagtgataata |
25715912 |
T |
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| Q |
205 |
ttttctgaaaataaagaagtgaagtcaaatagtttgataaataccatattccattttaataa |
266 |
Q |
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| T |
25715913 |
ttttctgaaaataaagaagtgaagtcaaatagtttgataaataccatattccattttaataa |
25715974 |
T |
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