View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15601_high_15 (Length: 250)
Name: NF15601_high_15
Description: NF15601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15601_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 52901169 - 52901393
Alignment:
| Q |
11 |
attacaaaatatgcttgtttggatttccatcatttatttaaccatgcttttttgtttgatacttgatccaattcttacattttcctactttatgtaggaa |
110 |
Q |
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| T |
52901169 |
attacaaaatatgcttgtttggatttccatcatttatttaaccatgcttttttgtttgatacttgatccaattctaagattttcctactttatgtaggaa |
52901268 |
T |
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| Q |
111 |
acaattcaaacaatcttgctttgactgatataactgaaactactggttgggaacttgcacttgttaccacgccaagcaaccacacctgccaagcgtcaga |
210 |
Q |
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|||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52901269 |
acaattcaaacaatcttgctttgactaatataactggaactactggttgggaacttgcacttgttaccacgccaagcaaccacacctgccaagcgtcaga |
52901368 |
T |
|
| Q |
211 |
tcaaaacatggtttgttttacaact |
235 |
Q |
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||||||||||||||||||||||||| |
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| T |
52901369 |
tcaaaacatggtttgttttacaact |
52901393 |
T |
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