View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15601_low_16 (Length: 268)
Name: NF15601_low_16
Description: NF15601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15601_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 52901033 - 52900855
Alignment:
| Q |
1 |
caaatgtaaaacaatatattatatattccatgaaaccaaatttcacaaacatgaaagccattaccatataagttcataaccaaagtataccagaaaatca |
100 |
Q |
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| T |
52901033 |
caaatgtaaaacaatatattatatattccatgaaaccaagtttcacaaacatgaaagccattaccatataagttcataaccaaagtataccagaaaatca |
52900934 |
T |
|
| Q |
101 |
tcataaccatcagtcaatatcaaaggaggaaattcagcctcctctgtttgttccttttcaacaggttcttcctccttga |
179 |
Q |
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| T |
52900933 |
tcataaccatcagtcaatatcaaaggaggaaattcagcctcctctgtttgttccttttcaacaggttcttcctccttga |
52900855 |
T |
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