View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15603_high_2 (Length: 251)
Name: NF15603_high_2
Description: NF15603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15603_high_2 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 38924562 - 38924312
Alignment:
| Q |
1 |
ctttctgtttttccaacaccaaatatagtgtcatcaaccactggtctcacaacaactcttgaccaaatttgtgttgtttcatgtagtcccaaaagaaata |
100 |
Q |
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| T |
38924562 |
ctttctgtttttccaacaccaaatatagtgtcatcaaccactggtctcacaacaactcttgaccaaatttgtgttgtttcatgtagtcccaaaagaaata |
38924463 |
T |
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| Q |
101 |
tcattctacttatgaagcttctttcaagaccaaaactactagaaccatcatcaaaaacgtcgttgtcagagtcgaaaactccagctgcaatgcttgcttc |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
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| T |
38924462 |
tcattctacttatgaagcttctttcaacaccaaaactactagaaccatcatcaaaaacatcgttgtcggagtcgaaaactccagctgcaatgcttgcttc |
38924363 |
T |
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| Q |
201 |
aattcctaaaccaacgcatatttgaaaagtgaaaagaagaatccatttcca |
251 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
38924362 |
aattcctaaaccaacacatatttgaaaagtgaaaagaagaatccatttcca |
38924312 |
T |
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