View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15605_high_1 (Length: 839)
Name: NF15605_high_1
Description: NF15605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15605_high_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 605; Significance: 0; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 605; E-Value: 0
Query Start/End: Original strand, 127 - 820
Target Start/End: Original strand, 4903301 - 4903995
Alignment:
| Q |
127 |
ttacttcttcatgatttgctcgaggatttgaatgggtttgtcttgggcgaggagggggatgattggatttggaggttggaagaggaaggtgctttttcgg |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4903301 |
ttacttcttcatgatttgctcgaggatttgaatgggtttgtcttgggcgaggagggggatgattggatttggaggttggatgaggaaggtgctttttcgg |
4903400 |
T |
|
| Q |
227 |
taaaatcaatgtattctaaattggaaacattgatgataagggaggaaggtcttgatggtctcccgaggagggttagctcgcatatttggaagagcccggc |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
4903401 |
taaaatcaatgtattctaaattggaaacattgatgataagggaggaagatcttgatggtctcccgaggaaggttttctcgcatatttggaagagcccggc |
4903500 |
T |
|
| Q |
327 |
--cgtcgaaagtggtggtttttacttggaaacttcttcatgatagaatcccaacaaagatcaaccttgctataagaaactcgctcccaccggatagctct |
424 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4903501 |
accgtcgaaagtggtggtttttacttggaaacttcttcacgatagaatcccaacaaagatcaaccttgctataagaaactcgctcccaccggatagctct |
4903600 |
T |
|
| Q |
425 |
ctacagtgtgtttggagcaacaattcgattgaagattcatcacatctttttcttcattgcgaaggggttggtaaggtctggagtaagcttatggagtggt |
524 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4903601 |
ctacagtgtgtttggtgcaataattcgattgaagattcaacacatatttttcttcattgcgaaggggttggtaaggtctggtgtaagcttatggagtggt |
4903700 |
T |
|
| Q |
525 |
tggaatttaattttttaattcctcctaatctgtttattatgtgggaatgttggaatggtgagtttttgaataaaaagctgcgcaggggtgggtagattaa |
624 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
4903701 |
tggaatttaattttttaattcctcctaatctgtttattatgtggcaatgttggaatggtgagtttttgaacaaaaagctgcgcaggggt-ggtagattaa |
4903799 |
T |
|
| Q |
625 |
tttggcatgctgcaatttggagtatttggaaagcgaggaatgacagaattttcaacaatgttgtgacagatgtggaggagttgttggaatctgttaaggt |
724 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4903800 |
tttggcatgctgcaatttggagtatttggaaagcgaggaatgacagaattttcaacaatgttgtgacagatgtggaggagctgttggaatctgttaaggt |
4903899 |
T |
|
| Q |
725 |
gttgtcttggaggtggtttttgggtaggttgaattcatacgcgtgtttgttttatgagtggaattggaatccgaaggattgtttgttgcggtgatg |
820 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4903900 |
gttgtcttggagatggtttttgggtaggttgaattcgtacgcgtttttgttttatgagtggaattggaatctgaaggattgtttgttgcggtgatg |
4903995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 9336403 - 9336312
Alignment:
| Q |
36 |
aaaaagaatgttcctgaataaatgatcgcatatatcctaaccaaatatccctcaataatgaatacatgacacgtatacttataccagggact |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| |
|
|
| T |
9336403 |
aaaaagaatgttcctgaataaatgatcgcatatatcctaaccaaatatccctcaacaatgaatacatgacacatatacttataccagagact |
9336312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 509 - 578
Target Start/End: Original strand, 1557161 - 1557230
Alignment:
| Q |
509 |
aagcttatggagtggttggaatttaattttttaattcctcctaatctgtttattatgtgggaatgttgga |
578 |
Q |
| |
|
||||||||||| ||| |||| |||||||||||||| || || |||||||||||||||||||||||||||| |
|
|
| T |
1557161 |
aagcttatggactggctggactttaattttttaatccccccaaatctgtttattatgtgggaatgttgga |
1557230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 1556798 - 1556905
Alignment:
| Q |
148 |
gaggatttgaatgggtttgtcttgggcgaggagggggatgattggatttggaggttggaagaggaaggtgctttttcggtaaaatcaatgtattctaaat |
247 |
Q |
| |
|
|||||||||||||| |||| || | || |||| |||| |||||| ||||||||||| ||||| || ||||| ||||| |||||||||||||| |||| |
|
|
| T |
1556798 |
gaggatttgaatggttttggttttgtggaagaggaggatcattggaagtggaggttggaggaggacggagctttctcggtcaaatcaatgtattcaaaat |
1556897 |
T |
|
| Q |
248 |
tggaaaca |
255 |
Q |
| |
|
|||||||| |
|
|
| T |
1556898 |
tggaaaca |
1556905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 1556987 - 1557054
Alignment:
| Q |
335 |
gtggtggtttttacttggaaacttcttcatgatagaatcccaacaaagatcaaccttgctataagaaa |
402 |
Q |
| |
|
|||||||||||| ||||||||||||| || |||||||| || ||||||| ||||||||| || ||||| |
|
|
| T |
1556987 |
gtggtggttttttcttggaaacttctccacgatagaattcctacaaagaccaaccttgcaattagaaa |
1557054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 708 - 814
Target Start/End: Original strand, 1557359 - 1557465
Alignment:
| Q |
708 |
ttggaatctgttaaggtgttgtcttggaggtggtttttgggtaggttgaattcatacgcgtgtttgttttatgagtggaattggaatccgaaggattgtt |
807 |
Q |
| |
|
|||||||| ||||||| ||||| |||||||||| ||||||||| |||| | || ||||||||||| || |||||||||||||||||| ||||| |
|
|
| T |
1557359 |
ttggaatcaattaaggtattgtcgtggaggtggtgtttgggtagattgagcttgccagcttgtttgttttacgaatggaattggaatccgaagaattgtc |
1557458 |
T |
|
| Q |
808 |
tgttgcg |
814 |
Q |
| |
|
||||||| |
|
|
| T |
1557459 |
tgttgcg |
1557465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 445; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 127 - 820
Target Start/End: Complemental strand, 22154235 - 22153562
Alignment:
| Q |
127 |
ttacttcttcatgatttgctcgaggatttgaatgggtttgtcttgggcgaggagggggatgattggatttggaggttggaagaggaaggtgctttttcgg |
226 |
Q |
| |
|
||||||||||| |||||| | || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
22154235 |
ttacttcttcacgatttgttagaagatttgaatgggtttgtgttgggcgaggagggggatgattggatttggaggttggatgaggaaggtgctttgtcaa |
22154136 |
T |
|
| Q |
227 |
taaaatcaatgtattctaaattggaaacattgatgataagggaggaaggtcttgatggtctcccgaggagggttagctcgcatatttggaagagcccggc |
326 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||| |
|
|
| T |
22154135 |
taaaataaatttattctaaattggaaacattgatgataagggaggatggtcttgatggtctcccgacgaaggttttttcgcatatttggaagagcccggc |
22154036 |
T |
|
| Q |
327 |
--cgtcgaaagtggtggtttttacttggaaacttcttcatgatagaatcccaacaaagatcaaccttgctataagaaactcgctcccaccggatagctct |
424 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22154035 |
accgtcggaagtgatggttttta---------------------gaatcccaacaaagatcaaccttgctataaggaactcgctcccaccggatagctct |
22153957 |
T |
|
| Q |
425 |
ctacagtgtgtttggagcaacaattcgattgaagattcatcacatctttttcttcattgcgaaggggttggtaaggtctggagtaagcttatggagtggt |
524 |
Q |
| |
|
|| |||||||||||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22153956 |
cttcagtgtgtttggtgcaacaattcgattaaagatttaacacatctttttcttcattgcgaaggggttggtaaggtctggtgtaagcttatggagtggt |
22153857 |
T |
|
| Q |
525 |
tggaatttaattttttaattcctcctaatctgtttattatgtgggaatgttggaatggtgagtttttgaataaaaagctgcgcaggggtgggtagattaa |
624 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
22153856 |
tggaatttaattttttaatccctcttaatctgtttattatgcgggaatgttggaatggtgagtttttgaacaaaaagctgcgctggggt-ggtagattaa |
22153758 |
T |
|
| Q |
625 |
tttggcatgctgcaatttggagtatttggaaagcgaggaatgacagaattttcaacaatgttgtgacagatgtggaggagttgttggaatctgttaaggt |
724 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||| ||||||| |
|
|
| T |
22153757 |
tttggcatgccgcaatttggagtatttggaaagcgaggaatgacataattttcaacaatattgtgacagatgtggagaagctgttggaatcttttaaggt |
22153658 |
T |
|
| Q |
725 |
gttgtcttggaggtggtttttgggtaggttgaattcatacgcgtgtttgttttatgagtggaattggaatccgaaggattgtttgttgcggtgatg |
820 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22153657 |
gttgtcttggaggtgatttttgggtaggttgaattcgcacgcgtgtttgttttatgagtggaattggaatccgaaggtttgtttgttgcggtgatg |
22153562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 127 - 820
Target Start/End: Complemental strand, 22210150 - 22209477
Alignment:
| Q |
127 |
ttacttcttcatgatttgctcgaggatttgaatgggtttgtcttgggcgaggagggggatgattggatttggaggttggaagaggaaggtgctttttcgg |
226 |
Q |
| |
|
||||||||||| |||||| | || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
22210150 |
ttacttcttcacgatttgttagaagatttgaatgggtttgtgttgggcgaggagggggatgattggatttggaggttggatgaggaaggtgctttgtcaa |
22210051 |
T |
|
| Q |
227 |
taaaatcaatgtattctaaattggaaacattgatgataagggaggaaggtcttgatggtctcccgaggagggttagctcgcatatttggaagagcccggc |
326 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||| |
|
|
| T |
22210050 |
taaaataaatttattctaaattggaaacattgatgataagggaggatggtcttgatggtctcccgacgaaggttttttcgcatatttggaagagcccggc |
22209951 |
T |
|
| Q |
327 |
--cgtcgaaagtggtggtttttacttggaaacttcttcatgatagaatcccaacaaagatcaaccttgctataagaaactcgctcccaccggatagctct |
424 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22209950 |
accgtcggaagtgatggttttta---------------------gaatcccaacaaagatcaaccttgctataaggaactcgctcccaccggatagctct |
22209872 |
T |
|
| Q |
425 |
ctacagtgtgtttggagcaacaattcgattgaagattcatcacatctttttcttcattgcgaaggggttggtaaggtctggagtaagcttatggagtggt |
524 |
Q |
| |
|
|| |||||||||||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22209871 |
cttcagtgtgtttggtgcaacaattcgattaaagatttaacacatctttttcttcattgcgaaggggttggtaaggtctggtgtaagcttatggagtggt |
22209772 |
T |
|
| Q |
525 |
tggaatttaattttttaattcctcctaatctgtttattatgtgggaatgttggaatggtgagtttttgaataaaaagctgcgcaggggtgggtagattaa |
624 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
22209771 |
tggaatttaattttttaatccctcttaatctgtttattatgcgggaatgttggaatggtgagtttttgaacaaaaagctgcgctggggt-ggtagattaa |
22209673 |
T |
|
| Q |
625 |
tttggcatgctgcaatttggagtatttggaaagcgaggaatgacagaattttcaacaatgttgtgacagatgtggaggagttgttggaatctgttaaggt |
724 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||| ||||||| |
|
|
| T |
22209672 |
tttggcatgccgcaatttggagtatttggaaagcgaggaatgacataattttcaacaatattgtgacagatgtggagaagctgttggaatcttttaaggt |
22209573 |
T |
|
| Q |
725 |
gttgtcttggaggtggtttttgggtaggttgaattcatacgcgtgtttgttttatgagtggaattggaatccgaaggattgtttgttgcggtgatg |
820 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22209572 |
gttgtcttggaggtgatttttgggtaggttgaattcgcacgcgtgtttgttttatgagtggaattggaatccgaaggtttgtttgttgcggtgatg |
22209477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 583
Target Start/End: Original strand, 41450779 - 41450828
Alignment:
| Q |
534 |
attttttaattcctcctaatctgtttattatgtgggaatgttggaatggt |
583 |
Q |
| |
|
|||||||||||||||| ||| |||||||| | ||| |||||||||||||| |
|
|
| T |
41450779 |
attttttaattcctccaaatttgtttattctttggcaatgttggaatggt |
41450828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 58; Significance: 6e-24; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 195 - 818
Target Start/End: Original strand, 53561813 - 53562433
Alignment:
| Q |
195 |
ttggaggttggaagaggaaggtgctttttcggtaaaatcaatgtattctaaattggaaacattgatgataagggaggaaggtcttgatggtctcccgagg |
294 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||| ||||| |||||||| |||||||||||||||||| | ||||| || | ||||||| || |||| |
|
|
| T |
53561813 |
ttggagtttggaagaggacggtactttttcggttaaatctatgtattccaaattggaaacattgatggtgagggaagagagccttgatgaactagagagg |
53561912 |
T |
|
| Q |
295 |
agggttagctcgcatatttggaagagcccg--gccgtcgaaagtggtggtttttacttggaaacttcttcatgatagaatcccaacaaagatcaaccttg |
392 |
Q |
| |
|
||||| ||||||||||||||| ||| |||||| || || || || || | |||||||| || ||||||||||| || || ||||| || || | |
|
|
| T |
53561913 |
agggtgtttaagcatatttggaagagtccggcgccgtccaaggtcgttgtcttctcgtggaaactcctccatgatagaattcctacgaagattaatctag |
53562012 |
T |
|
| Q |
393 |
ctataagaaactcgctcccaccggatagctctctacagtgtgtttggagcaacaattcgattgaagattcatcacatctttttcttcattgcgaaggggt |
492 |
Q |
| |
|
|||| || || | |||||||||||| ||| ||||||| ||| | || || || ||||||| | | ||| | ||||||||||| |||||||| |
|
|
| T |
53562013 |
ctattaggaattgtttcccaccggatacatcttatgagtgtgtgtggtgtaataacacggctgaagatgctactcatttatttcttcattgtgaaggggt |
53562112 |
T |
|
| Q |
493 |
tggtaaggtctggagtaagcttatggagtggttggaatttaattttttaattcctcctaatctgtttattatgtgggaatgttggaatggtgagtttttg |
592 |
Q |
| |
|
||| ||| ||||| | ||||| |||||||| ||||||||| ||||||| || ||||| |||||| ||||||||||||||||||| | |||| |
|
|
| T |
53562113 |
gaaggtggtttggtgtaagatcatggaatggttggactttaattttataattccaccgaatctttttattttgtgggaatgttggaatggagctgtttta |
53562212 |
T |
|
| Q |
593 |
aataaaaagctgcgcaggggtgggtagattaatttggcatgctgcaatttggagtatttggaaagcgaggaatgacagaattttcaacaatgttgtgaca |
692 |
Q |
| |
|
||||| ||| || | ||| | |||| | ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||| ||| | |
|
|
| T |
53562213 |
aataataagacccgtaaaggt-gttagaattatttggcatgctgttatttggagtatatggaaagcgaggaacgacagaattttcaataatgctgttatt |
53562311 |
T |
|
| Q |
693 |
gatgtggaggagttgttggaatctgttaaggtgttgtcttggaggtggtttttgggtaggttgaattcatacgcgtgtttgttttatgagtggaattgga |
792 |
Q |
| |
|
|| || ||||| ||||| | || ||||| ||||||||||||||| |||||| || || || | |||| |||||| || |||||||| |||| |
|
|
| T |
53562312 |
gaggttgaggatctgttg----cagtcaaggttttgtcttggaggtggagtttgggaagattaaagttgccggcgtttttgttctacgagtggaagtgga |
53562407 |
T |
|
| Q |
793 |
atccgaaggattgtttgttgcggtga |
818 |
Q |
| |
|
|||| ||||| |||||| |||||||| |
|
|
| T |
53562408 |
atcccaaggactgtttgatgcggtga |
53562433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 501 - 820
Target Start/End: Complemental strand, 38185584 - 38185266
Alignment:
| Q |
501 |
tctggagtaagcttatggagtggttggaatttaattttttaattcctcctaatctgtttattatgtgggaatgttggaatggtgagtttttgaataaaaa |
600 |
Q |
| |
|
||||| || |||||||||||||| ||||||| |||||| ||||||| || ||||||||||| | |||||||||||||||| | | | ||| |||||||| |
|
|
| T |
38185584 |
tctggcgtgagcttatggagtggctggaattcaattttataattccaccgaatctgtttatcacgtgggaatgttggaattgagcggtttataataaaaa |
38185485 |
T |
|
| Q |
601 |
gctgcgcaggggtgggtagattaatttggcatgctgcaatttggagtatttggaaagcgaggaatgacagaattttcaacaatgttgtgacagatgtgga |
700 |
Q |
| |
|
| | | | ||| | | || | ||||||||||| || |||||||| || |||||||| |||||||| | || ||| || |||| ||| ||| || |
|
|
| T |
38185484 |
gatttgtaagggagtg-aggcttatttggcatgccgccatttggagcatatggaaagctaggaatgatataacttttaataatgcagtgttggattgtga |
38185386 |
T |
|
| Q |
701 |
ggagttgttggaatctgttaaggtgttgtcttggaggtggtttttgggtaggttgaattcatacgcgtgtttgttttatgagtggaattggaatccgaag |
800 |
Q |
| |
|
|| ||| |||||||| ||||||||||| | |||||||||| ||| ||||| | || | || ||||||||||| ||||||||||||||||||||| |
|
|
| T |
38185385 |
ggcattgctggaatctattaaggtgttggcctggaggtggtgttttggtagaataaacttgccggcatgtttgttttacgagtggaattggaatccgaag |
38185286 |
T |
|
| Q |
801 |
gattgtttgttgcggtgatg |
820 |
Q |
| |
|
|| || |||||||||||||| |
|
|
| T |
38185285 |
gaatgcttgttgcggtgatg |
38185266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 34821709 - 34821645
Alignment:
| Q |
332 |
aaagtggtggtttttacttggaaacttcttcatgatagaatcccaacaaagatcaaccttgctat |
396 |
Q |
| |
|
|||||||| || ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34821709 |
aaagtggtcgtctttgcttggaaacttcttcatgatagaatcccaacaaaaatcaaccttgctat |
34821645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 34821847 - 34821782
Alignment:
| Q |
196 |
tggaggttggaagaggaaggtgctttttcggtaaaatcaatgtattctaaattggaaacattgatg |
261 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34821847 |
tggaggttggaggaggatggggccttttcggtaaaatcaatgtattctagattggaaacattgatg |
34821782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 584
Target Start/End: Complemental strand, 34821538 - 34821457
Alignment:
| Q |
503 |
tggagtaagcttatggagtggttggaatttaattttttaattcctcctaatctgtttattatgtgggaatgttggaatggtg |
584 |
Q |
| |
|
||||||||||| ||||||||||| || ||||| || |||| ||||| ||| ||||||| |||||| | ||||||||||||| |
|
|
| T |
34821538 |
tggagtaagctcatggagtggttagacattaatattataatccctccgaatttgtttatcatgtggaattgttggaatggtg |
34821457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 718 - 752
Target Start/End: Complemental strand, 43073787 - 43073753
Alignment:
| Q |
718 |
ttaaggtgttgtcttggaggtggtttttgggtagg |
752 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
43073787 |
ttaaggtgttgtcttggaggtggttgttgggtagg |
43073753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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