View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15605_high_34 (Length: 326)

Name: NF15605_high_34
Description: NF15605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15605_high_34
NF15605_high_34
[»] chr8 (101 HSPs)
chr8 (24-124)||(38706639-38706739)
chr8 (27-121)||(14121944-14122038)
chr8 (27-131)||(5250579-5250684)
chr8 (27-124)||(25102158-25102255)
chr8 (24-124)||(36471021-36471121)
chr8 (27-124)||(44265446-44265543)
chr8 (27-124)||(6590263-6590360)
chr8 (27-124)||(9252645-9252742)
chr8 (197-314)||(36470830-36470947)
chr8 (27-113)||(6413477-6413563)
chr8 (197-314)||(36063441-36063558)
chr8 (27-113)||(21135321-21135407)
chr8 (22-124)||(27875643-27875745)
chr8 (22-124)||(28015824-28015926)
chr8 (27-113)||(43623001-43623087)
chr8 (197-314)||(23483513-23483630)
chr8 (197-314)||(41281307-41281424)
chr8 (197-314)||(44265617-44265734)
chr8 (197-314)||(42499386-42499502)
chr8 (197-271)||(24451653-24451727)
chr8 (197-271)||(38706491-38706565)
chr8 (27-124)||(5696108-5696205)
chr8 (27-124)||(6018037-6018134)
chr8 (27-112)||(8784576-8784661)
chr8 (197-314)||(21135492-21135609)
chr8 (197-314)||(25101967-25102084)
chr8 (197-314)||(35369359-35369476)
chr8 (197-314)||(35863210-35863327)
chr8 (27-110)||(28755386-28755469)
chr8 (27-109)||(13323763-13323845)
chr8 (45-131)||(17062553-17062639)
chr8 (197-271)||(17498542-17498616)
chr8 (45-131)||(17585719-17585805)
chr8 (27-113)||(24451482-24451568)
chr8 (27-113)||(41590545-41590631)
chr8 (197-314)||(5250395-5250512)
chr8 (197-314)||(5695918-5696035)
chr8 (197-314)||(6018208-6018325)
chr8 (27-124)||(17498690-17498787)
chr8 (24-113)||(21159988-21160077)
chr8 (27-124)||(33322531-33322628)
chr8 (197-314)||(41590344-41590460)
chr8 (198-314)||(33322703-33322819)
chr8 (197-314)||(37706729-37706845)
chr8 (27-110)||(35863039-35863122)
chr8 (197-271)||(17062413-17062487)
chr8 (197-271)||(17585871-17585945)
chr8 (197-271)||(27875495-27875569)
chr8 (197-271)||(28015676-28015750)
chr8 (197-271)||(37967705-37967779)
chr8 (27-113)||(39336991-39337077)
chr8 (197-314)||(5765721-5765838)
chr8 (197-270)||(17842633-17842706)
chr8 (197-314)||(18839923-18840040)
chr8 (27-112)||(35369188-35369273)
chr8 (27-113)||(36063630-36063718)
chr8 (197-314)||(39337149-39337266)
chr8 (27-124)||(42499576-42499673)
chr8 (27-110)||(5765927-5766012)
chr8 (197-314)||(6590434-6590552)
chr8 (27-113)||(30658647-30658731)
chr8 (27-109)||(37967533-37967615)
chr8 (27-124)||(18840114-18840211)
chr8 (197-269)||(28755225-28755297)
chr8 (203-314)||(43936521-43936632)
chr8 (197-267)||(8784747-8784817)
chr8 (197-314)||(16473151-16473269)
chr8 (197-314)||(16477722-16477840)
chr8 (27-112)||(36018109-36018193)
chr8 (27-95)||(39337745-39337813)
chr8 (197-270)||(43622840-43622915)
chr8 (27-81)||(41255335-41255389)
chr8 (27-113)||(41281509-41281593)
chr8 (197-267)||(43988207-43988277)
chr8 (217-314)||(30968853-30968950)
chr8 (27-111)||(17842463-17842547)
chr8 (37-124)||(10409789-10409875)
chr8 (197-312)||(10410018-10410133)
chr8 (27-82)||(35369929-35369984)
chr8 (34-113)||(37706930-37707009)
chr8 (197-271)||(18304716-18304790)
chr8 (197-269)||(6243642-6243715)
chr8 (198-258)||(21159841-21159902)
chr8 (210-271)||(36018295-36018356)
chr8 (197-269)||(3865862-3865934)
chr8 (197-269)||(6244224-6244296)
chr8 (29-113)||(32244607-32244690)
chr8 (48-124)||(32514242-32514318)
chr8 (197-236)||(13323634-13323673)
chr8 (210-269)||(32243861-32243920)
chr8 (198-312)||(32514051-32514166)
chr8 (34-113)||(44894620-44894698)
chr8 (67-113)||(2826919-2826965)
chr8 (37-112)||(30968670-30968746)
chr8 (229-271)||(36126455-36126497)
chr8 (67-124)||(3866590-3866647)
chr8 (27-107)||(43988369-43988446)
chr8 (27-63)||(13323183-13323219)
chr8 (27-63)||(35863921-35863957)
chr8 (27-63)||(36062804-36062840)
chr8 (27-63)||(37706135-37706171)
[»] chr7 (92 HSPs)
chr7 (27-124)||(43597682-43597779)
chr7 (27-113)||(4926372-4926458)
chr7 (27-124)||(4883811-4883908)
chr7 (27-113)||(6588687-6588773)
chr7 (197-322)||(18059177-18059300)
chr7 (197-314)||(38159123-38159240)
chr7 (197-314)||(43597491-43597608)
chr7 (197-314)||(46044298-46044415)
chr7 (27-124)||(47791838-47791935)
chr7 (197-314)||(4926546-4926663)
chr7 (197-314)||(6331067-6331184)
chr7 (197-314)||(7238583-7238700)
chr7 (27-124)||(18059006-18059103)
chr7 (197-314)||(22378465-22378582)
chr7 (27-124)||(22378656-22378753)
chr7 (27-124)||(38158948-38159050)
chr7 (197-314)||(10620527-10620644)
chr7 (197-314)||(44167801-44167918)
chr7 (198-314)||(6588859-6588975)
chr7 (29-113)||(15653001-15653085)
chr7 (27-110)||(7238788-7238871)
chr7 (27-124)||(1961897-1961994)
chr7 (31-124)||(14990744-14990837)
chr7 (31-124)||(15420355-15420448)
chr7 (27-124)||(35482254-35482351)
chr7 (197-314)||(38199220-38199337)
chr7 (197-314)||(43083862-43083979)
chr7 (27-112)||(43574239-43574324)
chr7 (197-314)||(47792009-47792126)
chr7 (197-269)||(33624958-33625030)
chr7 (197-271)||(46330970-46331044)
chr7 (205-314)||(1962077-1962186)
chr7 (27-124)||(21109545-21109642)
chr7 (27-108)||(38598967-38599048)
chr7 (27-111)||(43084053-43084137)
chr7 (26-113)||(3495655-3495742)
chr7 (219-314)||(35482066-35482161)
chr7 (27-113)||(44167990-44168074)
chr7 (197-271)||(36019812-36019886)
chr7 (27-113)||(38199062-38199148)
chr7 (197-318)||(4899867-4899987)
chr7 (28-113)||(11397167-11397252)
chr7 (27-112)||(36020005-36020090)
chr7 (197-271)||(15130881-15130955)
chr7 (27-113)||(46330799-46330885)
chr7 (197-314)||(1544482-1544599)
chr7 (197-314)||(3495814-3495931)
chr7 (197-314)||(14990555-14990671)
chr7 (197-314)||(15420166-15420282)
chr7 (29-82)||(27727998-27728051)
chr7 (197-269)||(38599139-38599211)
chr7 (27-118)||(33624788-33624878)
chr7 (27-113)||(4900073-4900158)
chr7 (197-314)||(37539957-37540074)
chr7 (26-82)||(38199808-38199864)
chr7 (198-270)||(43574412-43574484)
chr7 (27-113)||(45958867-45958953)
chr7 (34-113)||(46044501-46044580)
chr7 (34-124)||(1066602-1066691)
chr7 (219-314)||(11396965-11397060)
chr7 (197-266)||(1065862-1065931)
chr7 (27-112)||(1544685-1544769)
chr7 (29-126)||(9633366-9633461)
chr7 (29-113)||(1260142-1260225)
chr7 (197-269)||(12621625-12621697)
chr7 (197-314)||(27727233-27727352)
chr7 (27-79)||(29156208-29156260)
chr7 (27-82)||(3496423-3496478)
chr7 (34-113)||(8081814-8081892)
chr7 (210-269)||(37107863-37107922)
chr7 (29-96)||(37537487-37537553)
chr7 (220-271)||(44081152-44081203)
chr7 (219-314)||(47139743-47139838)
chr7 (34-112)||(38593281-38593358)
chr7 (232-314)||(45958733-45958815)
chr7 (27-63)||(15131588-15131624)
chr7 (27-82)||(43083327-43083383)
chr7 (210-269)||(38594697-38594756)
chr7 (34-124)||(16080966-16081055)
chr7 (213-267)||(42974161-42974215)
chr7 (27-113)||(44080958-44081043)
chr7 (27-112)||(17018571-17018656)
chr7 (197-242)||(29156045-29156090)
chr7 (197-269)||(8081976-8082048)
chr7 (34-82)||(8082539-8082586)
chr7 (197-269)||(8832880-8832952)
chr7 (34-82)||(8833445-8833492)
chr7 (34-82)||(18798947-18798994)
chr7 (283-323)||(19720855-19720895)
chr7 (27-63)||(33625666-33625702)
chr7 (27-63)||(45958105-45958141)
chr7 (27-63)||(46043663-46043699)
[»] chr5 (106 HSPs)
chr5 (27-124)||(10463737-10463834)
chr5 (27-124)||(8313209-8313306)
chr5 (27-124)||(8336843-8336940)
chr5 (197-314)||(10463908-10464025)
chr5 (27-124)||(27307819-27307916)
chr5 (203-318)||(37103209-37103324)
chr5 (197-314)||(1683172-1683289)
chr5 (197-314)||(4426193-4426310)
chr5 (197-314)||(8337014-8337130)
chr5 (27-110)||(9687715-9687798)
chr5 (22-113)||(22023276-22023367)
chr5 (197-314)||(24636945-24637063)
chr5 (27-124)||(2003952-2004049)
chr5 (197-314)||(8218018-8218135)
chr5 (27-124)||(37103032-37103129)
chr5 (197-314)||(38693473-38693590)
chr5 (27-110)||(30394080-30394163)
chr5 (27-113)||(8218207-8218293)
chr5 (27-113)||(27335630-27335716)
chr5 (197-314)||(8313380-8313496)
chr5 (27-124)||(8404593-8404690)
chr5 (197-314)||(17742497-17742614)
chr5 (197-314)||(21837110-21837227)
chr5 (197-314)||(27307990-27308107)
chr5 (27-124)||(34785448-34785544)
chr5 (197-314)||(40158436-40158552)
chr5 (27-103)||(2005023-2005099)
chr5 (27-119)||(4426022-4426114)
chr5 (29-124)||(1683363-1683458)
chr5 (197-271)||(9924412-9924486)
chr5 (27-113)||(24637148-24637234)
chr5 (27-113)||(26865889-26865975)
chr5 (27-113)||(40158265-40158351)
chr5 (27-124)||(41193174-41193272)
chr5 (31-124)||(621824-621917)
chr5 (197-314)||(4462927-4463044)
chr5 (197-318)||(27335801-27335922)
chr5 (27-124)||(42877809-42877905)
chr5 (48-123)||(9924280-9924355)
chr5 (197-314)||(8404401-8404519)
chr5 (197-267)||(9687585-9687655)
chr5 (27-113)||(13920063-13920149)
chr5 (197-314)||(34527188-34527306)
chr5 (27-113)||(41139025-41139111)
chr5 (27-113)||(43441069-43441155)
chr5 (197-314)||(621633-621750)
chr5 (197-314)||(13920234-13920351)
chr5 (217-314)||(22023104-22023201)
chr5 (197-321)||(41139196-41139321)
chr5 (27-99)||(4462756-4462828)
chr5 (198-314)||(34785257-34785373)
chr5 (204-271)||(41193026-41193093)
chr5 (204-267)||(43440927-43440990)
chr5 (27-113)||(16965935-16966021)
chr5 (55-113)||(37446433-37446491)
chr5 (27-113)||(4462157-4462245)
chr5 (197-314)||(26865713-26865830)
chr5 (197-268)||(2004123-2004194)
chr5 (210-269)||(18261230-18261289)
chr5 (27-113)||(34527030-34527116)
chr5 (197-314)||(4461969-4462086)
chr5 (27-124)||(18261375-18261471)
chr5 (27-96)||(26865232-26865301)
chr5 (197-314)||(28456679-28456796)
chr5 (197-314)||(34010093-34010210)
chr5 (27-123)||(6365413-6365508)
chr5 (204-314)||(31211366-31211477)
chr5 (204-267)||(42852901-42852964)
chr5 (27-92)||(8217510-8217575)
chr5 (27-113)||(17742333-17742411)
chr5 (210-271)||(22166924-22166985)
chr5 (36-113)||(22167085-22167161)
chr5 (198-271)||(27280328-27280401)
chr5 (27-68)||(28456585-28456626)
chr5 (66-115)||(42852775-42852824)
chr5 (197-269)||(2005195-2005267)
chr5 (197-312)||(10674812-10674927)
chr5 (231-314)||(18950876-18950959)
chr5 (34-124)||(10674648-10674737)
chr5 (34-124)||(43210825-43210914)
chr5 (210-271)||(36876038-36876099)
chr5 (197-314)||(42877619-42877736)
chr5 (197-321)||(3548347-3548470)
chr5 (198-314)||(14049762-14049878)
chr5 (46-113)||(36875874-36875942)
chr5 (29-113)||(40272459-40272542)
chr5 (197-269)||(43210678-43210750)
chr5 (210-269)||(2262845-2262904)
chr5 (27-113)||(31211187-31211274)
chr5 (27-82)||(38693676-38693731)
chr5 (34-124)||(2262992-2263081)
chr5 (197-271)||(30733974-30734048)
chr5 (34-124)||(43209900-43209989)
chr5 (197-269)||(30394252-30394323)
chr5 (34-113)||(32537608-32537687)
chr5 (27-71)||(37446329-37446373)
chr5 (210-241)||(9168631-9168662)
chr5 (27-62)||(28381186-28381221)
chr5 (34-109)||(37812678-37812752)
chr5 (27-62)||(43538588-43538623)
chr5 (54-112)||(14049943-14050001)
chr5 (210-271)||(6365347-6365408)
chr5 (27-60)||(34527365-34527398)
chr5 (197-269)||(19332632-19332704)
chr5 (198-269)||(37446572-37446644)
chr5 (27-59)||(43440248-43440280)
[»] chr6 (68 HSPs)
chr6 (27-124)||(15721263-15721360)
chr6 (197-314)||(10915474-10915591)
chr6 (197-314)||(844278-844395)
chr6 (28-113)||(938845-938930)
chr6 (197-314)||(26356702-26356819)
chr6 (197-314)||(30660950-30661067)
chr6 (27-113)||(5974518-5974604)
chr6 (27-124)||(26356528-26356628)
chr6 (27-124)||(2087438-2087534)
chr6 (27-124)||(5087388-5087485)
chr6 (197-314)||(8710006-8710123)
chr6 (197-314)||(17245751-17245868)
chr6 (27-124)||(30660778-30660875)
chr6 (198-314)||(30492881-30492997)
chr6 (27-113)||(5079716-5079802)
chr6 (27-110)||(10915301-10915386)
chr6 (30-124)||(33518554-33518648)
chr6 (197-314)||(5087197-5087314)
chr6 (197-314)||(5974316-5974433)
chr6 (197-314)||(17697393-17697510)
chr6 (27-110)||(33744875-33744958)
chr6 (27-124)||(1820983-1821078)
chr6 (27-113)||(8709836-8709921)
chr6 (219-321)||(12481948-12482050)
chr6 (197-314)||(861365-861482)
chr6 (197-314)||(15721069-15721189)
chr6 (197-314)||(29691918-29692035)
chr6 (32-110)||(17697598-17697676)
chr6 (27-113)||(18503188-18503274)
chr6 (197-271)||(20510650-20510724)
chr6 (197-314)||(34046557-34046675)
chr6 (27-124)||(844106-844203)
chr6 (197-314)||(939015-939132)
chr6 (197-314)||(1821150-1821267)
chr6 (197-314)||(18502999-18503116)
chr6 (27-124)||(22732197-22732293)
chr6 (28-124)||(29692109-29692205)
chr6 (197-313)||(33744670-33744786)
chr6 (27-109)||(20898193-20898275)
chr6 (203-314)||(20897818-20897931)
chr6 (27-111)||(17244540-17244624)
chr6 (27-113)||(861568-861655)
chr6 (203-314)||(20977540-20977651)
chr6 (197-318)||(30353129-30353251)
chr6 (197-271)||(5079557-5079631)
chr6 (197-259)||(14256212-14256274)
chr6 (27-124)||(14256342-14256440)
chr6 (198-259)||(28476253-28476314)
chr6 (27-109)||(11400281-11400364)
chr6 (27-82)||(17246321-17246376)
chr6 (27-82)||(28476431-28476486)
chr6 (197-269)||(3914474-3914546)
chr6 (220-271)||(33518407-33518458)
chr6 (228-314)||(20977199-20977285)
chr6 (197-250)||(2087608-2087661)
chr6 (198-267)||(11400122-11400191)
chr6 (27-71)||(20510491-20510535)
chr6 (197-271)||(22732048-22732123)
chr6 (27-70)||(30492722-30492765)
chr6 (29-82)||(5079000-5079053)
chr6 (197-271)||(24958932-24959008)
chr6 (34-109)||(21108281-21108355)
chr6 (34-124)||(289005-289094)
chr6 (34-99)||(289583-289647)
chr6 (197-269)||(21108119-21108191)
chr6 (27-63)||(22972047-22972083)
chr6 (27-63)||(23816315-23816351)
chr6 (84-131)||(30492767-30492815)
[»] chr4 (95 HSPs)
chr4 (27-124)||(30331476-30331573)
chr4 (27-124)||(19522712-19522809)
chr4 (27-124)||(33177619-33177716)
chr4 (27-124)||(38114410-38114507)
chr4 (27-121)||(3873374-3873468)
chr4 (27-124)||(53323774-53323872)
chr4 (197-326)||(19522883-19523012)
chr4 (27-124)||(47309434-47309531)
chr4 (27-124)||(51876007-51876104)
chr4 (197-314)||(53323946-53324063)
chr4 (197-321)||(3873152-3873276)
chr4 (22-124)||(43937996-43938098)
chr4 (27-124)||(22068097-22068194)
chr4 (197-314)||(33177428-33177545)
chr4 (197-314)||(47309605-47309722)
chr4 (27-99)||(7617539-7617611)
chr4 (203-314)||(7617425-7617536)
chr4 (29-124)||(28448583-28448677)
chr4 (197-314)||(30331285-30331402)
chr4 (27-124)||(44209680-44209777)
chr4 (198-314)||(53571549-53571665)
chr4 (27-110)||(44289677-44289760)
chr4 (27-110)||(48082443-48082526)
chr4 (204-314)||(28448398-28448508)
chr4 (27-113)||(37329487-37329573)
chr4 (197-314)||(43938173-43938291)
chr4 (197-314)||(11670277-11670394)
chr4 (197-314)||(22068268-22068385)
chr4 (197-314)||(25422237-25422354)
chr4 (197-314)||(44209502-44209619)
chr4 (34-111)||(55938075-55938152)
chr4 (22-113)||(20178084-20178175)
chr4 (27-110)||(25422067-25422150)
chr4 (27-109)||(4850094-4850176)
chr4 (34-124)||(31316547-31316637)
chr4 (197-314)||(31316711-31316829)
chr4 (197-271)||(33689343-33689417)
chr4 (197-314)||(1870277-1870393)
chr4 (204-321)||(3862488-3862606)
chr4 (204-321)||(3871245-3871363)
chr4 (27-124)||(13718173-13718271)
chr4 (27-109)||(33689506-33689588)
chr4 (27-113)||(51395821-51395907)
chr4 (27-113)||(53423774-53423859)
chr4 (27-113)||(53571738-53571824)
chr4 (31-124)||(35821128-35821220)
chr4 (27-111)||(10321695-10321779)
chr4 (197-313)||(44289849-44289965)
chr4 (27-113)||(10085485-10085571)
chr4 (197-271)||(35060876-35060950)
chr4 (197-271)||(47379226-47379300)
chr4 (197-314)||(51395619-51395736)
chr4 (197-271)||(53423613-53423689)
chr4 (203-314)||(10085662-10085772)
chr4 (29-112)||(52947972-52948054)
chr4 (197-271)||(7490863-7490937)
chr4 (27-124)||(23473675-23473773)
chr4 (197-314)||(10321866-10321983)
chr4 (27-96)||(11670860-11670929)
chr4 (197-270)||(20650555-20650628)
chr4 (197-314)||(23473485-23473601)
chr4 (197-313)||(48082615-48082731)
chr4 (28-99)||(50824410-50824481)
chr4 (204-314)||(4850272-4850382)
chr4 (27-113)||(11670119-11670205)
chr4 (27-113)||(35061035-35061120)
chr4 (197-245)||(38114288-38114336)
chr4 (197-269)||(44452256-44452328)
chr4 (197-264)||(20177933-20177999)
chr4 (27-82)||(31470962-31471017)
chr4 (219-321)||(52947760-52947863)
chr4 (203-314)||(55938245-55938355)
chr4 (34-124)||(38499295-38499384)
chr4 (36-109)||(7490707-7490775)
chr4 (29-126)||(13603785-13603880)
chr4 (197-265)||(48219943-48220011)
chr4 (197-271)||(47463535-47463612)
chr4 (197-313)||(51876179-51876297)
chr4 (27-113)||(47379386-47379471)
chr4 (27-96)||(53571008-53571078)
chr4 (28-109)||(48220100-48220180)
chr4 (27-95)||(53569155-53569224)
chr4 (210-269)||(28163777-28163836)
chr4 (34-113)||(34513227-34513305)
chr4 (209-271)||(35821294-35821357)
chr4 (34-76)||(35351913-35351954)
chr4 (34-99)||(6818023-6818087)
chr4 (27-63)||(25243861-25243897)
chr4 (27-63)||(25422943-25422979)
chr4 (27-63)||(31317815-31317851)
chr4 (197-269)||(34513070-34513142)
chr4 (27-63)||(35055124-35055160)
chr4 (27-63)||(44208875-44208911)
chr4 (34-126)||(44452093-44452184)
chr4 (32-112)||(47939788-47939867)
[»] chr1 (91 HSPs)
chr1 (27-124)||(13501206-13501303)
chr1 (27-124)||(51561545-51561642)
chr1 (197-326)||(51561342-51561471)
chr1 (27-124)||(30719479-30719577)
chr1 (197-314)||(30719651-30719768)
chr1 (27-110)||(31400219-31400302)
chr1 (197-326)||(13501377-13501504)
chr1 (27-113)||(19791239-19791325)
chr1 (197-321)||(43504938-43505062)
chr1 (197-314)||(52493699-52493817)
chr1 (29-110)||(26020611-26020692)
chr1 (197-314)||(33708952-33709069)
chr1 (197-314)||(37986751-37986868)
chr1 (198-314)||(12368250-12368366)
chr1 (48-124)||(47008844-47008920)
chr1 (30-113)||(21794413-21794496)
chr1 (22-113)||(35530781-35530872)
chr1 (27-113)||(30982591-30982677)
chr1 (27-113)||(43504775-43504861)
chr1 (27-113)||(46596984-46597070)
chr1 (197-314)||(11999889-12000006)
chr1 (27-112)||(36368100-36368185)
chr1 (197-270)||(46517223-46517296)
chr1 (27-113)||(15053640-15053726)
chr1 (197-271)||(36367940-36368014)
chr1 (27-113)||(52493528-52493614)
chr1 (197-314)||(30982389-30982506)
chr1 (29-96)||(2059078-2059145)
chr1 (197-321)||(2059516-2059639)
chr1 (197-268)||(19791410-19791481)
chr1 (27-113)||(28700954-28701041)
chr1 (31-113)||(11999722-11999804)
chr1 (27-113)||(37986903-37986989)
chr1 (197-310)||(21091220-21091333)
chr1 (197-270)||(26020450-26020523)
chr1 (27-124)||(26805690-26805786)
chr1 (197-314)||(36248495-36248612)
chr1 (30-113)||(10041449-10041532)
chr1 (31-113)||(12368439-12368521)
chr1 (27-113)||(33709154-33709240)
chr1 (197-271)||(47008697-47008770)
chr1 (27-96)||(12367703-12367772)
chr1 (197-314)||(46596783-46596900)
chr1 (210-321)||(39681978-39682090)
chr1 (204-271)||(7565229-7565296)
chr1 (203-313)||(21794511-21794621)
chr1 (197-314)||(26805498-26805616)
chr1 (197-263)||(28701126-28701192)
chr1 (27-113)||(36248333-36248419)
chr1 (198-271)||(15053799-15053872)
chr1 (197-269)||(31400391-31400463)
chr1 (198-314)||(35530958-35531074)
chr1 (27-82)||(29231884-29231939)
chr1 (27-113)||(21091051-21091136)
chr1 (197-314)||(5430571-5430688)
chr1 (27-96)||(15054418-15054487)
chr1 (30-95)||(36249086-36249151)
chr1 (27-96)||(37986209-37986278)
chr1 (198-314)||(10041247-10041363)
chr1 (29-113)||(13083446-13083529)
chr1 (27-123)||(17814398-17814493)
chr1 (33-113)||(31024266-31024345)
chr1 (29-113)||(33707580-33707663)
chr1 (29-113)||(42971953-42972036)
chr1 (197-269)||(52882360-52882432)
chr1 (34-124)||(12251567-12251656)
chr1 (210-271)||(35188357-35188418)
chr1 (197-269)||(12897143-12897215)
chr1 (197-269)||(27551561-27551633)
chr1 (219-319)||(42972161-42972261)
chr1 (197-269)||(49767857-49767929)
chr1 (197-269)||(52881759-52881831)
chr1 (211-265)||(20357120-20357174)
chr1 (211-265)||(20562781-20562835)
chr1 (34-124)||(27550800-27550889)
chr1 (210-267)||(31024109-31024167)
chr1 (34-124)||(48218049-48218138)
chr1 (29-82)||(1297104-1297156)
chr1 (280-321)||(6216375-6216416)
chr1 (210-271)||(33707420-33707481)
chr1 (34-114)||(48410127-48410207)
chr1 (197-269)||(12251420-12251492)
chr1 (34-113)||(11397039-11397117)
chr1 (27-82)||(13501452-13501506)
chr1 (34-113)||(25351963-25352041)
chr1 (47-112)||(26207482-26207547)
chr1 (197-269)||(25352125-25352197)
chr1 (34-62)||(35188186-35188214)
chr1 (27-63)||(36362477-36362513)
chr1 (27-63)||(46596153-46596189)
chr1 (210-238)||(48410328-48410356)
[»] chr3 (89 HSPs)
chr3 (27-124)||(38173902-38173999)
chr3 (27-124)||(25250016-25250113)
chr3 (197-326)||(25250185-25250314)
chr3 (27-124)||(21749566-21749663)
chr3 (27-112)||(23917328-23917413)
chr3 (197-322)||(45406834-45406959)
chr3 (27-110)||(40762812-40762895)
chr3 (27-113)||(37178941-37179027)
chr3 (27-113)||(53517993-53518079)
chr3 (197-314)||(11293965-11294082)
chr3 (34-124)||(23883588-23883678)
chr3 (27-113)||(32943000-32943086)
chr3 (27-113)||(45235555-45235641)
chr3 (27-124)||(45419983-45420078)
chr3 (33-110)||(39562762-39562839)
chr3 (27-124)||(44809038-44809135)
chr3 (197-314)||(50615091-50615208)
chr3 (197-314)||(53517791-53517908)
chr3 (197-301)||(32147167-32147271)
chr3 (27-110)||(46295051-46295134)
chr3 (27-126)||(53397095-53397194)
chr3 (27-124)||(29348275-29348370)
chr3 (27-113)||(32146996-32147082)
chr3 (29-126)||(3173705-3173802)
chr3 (197-314)||(27492485-27492602)
chr3 (24-113)||(28685303-28685392)
chr3 (197-314)||(32943157-32943274)
chr3 (197-318)||(38174073-38174194)
chr3 (197-314)||(40762607-40762724)
chr3 (197-314)||(45419792-45419909)
chr3 (203-314)||(117454-117565)
chr3 (27-113)||(19669699-19669786)
chr3 (27-113)||(117643-117729)
chr3 (203-321)||(19669877-19669995)
chr3 (197-271)||(23883440-23883514)
chr3 (197-314)||(37179112-37179230)
chr3 (197-271)||(45235394-45235468)
chr3 (27-113)||(50615280-50615366)
chr3 (27-113)||(53439324-53439410)
chr3 (197-314)||(44557586-44557703)
chr3 (203-271)||(21749743-21749811)
chr3 (27-126)||(37481251-37481351)
chr3 (197-311)||(44808849-44808964)
chr3 (197-271)||(29348444-29348518)
chr3 (197-271)||(53377437-53377511)
chr3 (197-267)||(53439482-53439551)
chr3 (27-112)||(27492313-27492398)
chr3 (31-113)||(53377326-53377410)
chr3 (197-313)||(11045575-11045691)
chr3 (29-113)||(15772074-15772157)
chr3 (197-314)||(23921082-23921197)
chr3 (197-269)||(39562601-39562673)
chr3 (197-313)||(46295224-46295340)
chr3 (29-113)||(54269055-54269138)
chr3 (27-96)||(116924-116993)
chr3 (27-96)||(44555364-44555433)
chr3 (27-96)||(50614546-50614615)
chr3 (197-267)||(53397266-53397338)
chr3 (197-264)||(34995701-34995768)
chr3 (27-89)||(11293800-11293862)
chr3 (27-113)||(19601549-19601634)
chr3 (197-269)||(8575953-8576025)
chr3 (210-266)||(9018204-9018260)
chr3 (57-113)||(44287972-44288028)
chr3 (197-269)||(44556687-44556759)
chr3 (210-269)||(33476241-33476300)
chr3 (29-124)||(44555919-44556013)
chr3 (34-113)||(52701168-52701246)
chr3 (29-75)||(11045404-11045450)
chr3 (29-113)||(33475471-33475554)
chr3 (60-112)||(34995564-34995616)
chr3 (197-269)||(41927429-41927501)
chr3 (197-245)||(44287843-44287891)
chr3 (64-124)||(45387449-45387509)
chr3 (34-124)||(8576101-8576191)
chr3 (197-265)||(19601720-19601790)
chr3 (34-124)||(41928036-41928126)
chr3 (27-113)||(44557775-44557864)
chr3 (53-112)||(45406701-45406760)
chr3 (34-112)||(31991074-31991151)
chr3 (197-269)||(25232827-25232900)
chr3 (210-267)||(31991251-31991308)
chr3 (197-269)||(52701332-52701404)
chr3 (210-244)||(54268922-54268956)
chr3 (221-314)||(8575373-8575466)
chr3 (47-112)||(26268779-26268844)
chr3 (27-63)||(32147859-32147895)
chr3 (34-126)||(41927278-41927369)
chr3 (34-82)||(52701900-52701947)
[»] scaffold1191 (2 HSPs)
scaffold1191 (27-131)||(669-773)
scaffold1191 (197-267)||(839-909)
[»] scaffold0562 (2 HSPs)
scaffold0562 (27-121)||(4193-4287)
scaffold0562 (197-321)||(3971-4095)
[»] scaffold0445 (2 HSPs)
scaffold0445 (30-124)||(6115-6209)
scaffold0445 (197-314)||(5924-6041)
[»] chr2 (87 HSPs)
chr2 (27-131)||(25666038-25666143)
chr2 (30-124)||(10357318-10357412)
chr2 (197-314)||(13372002-13372119)
chr2 (197-314)||(18672362-18672479)
chr2 (197-314)||(31771487-31771604)
chr2 (197-314)||(40364891-40365008)
chr2 (27-124)||(41120738-41120835)
chr2 (27-113)||(33832332-33832418)
chr2 (197-314)||(7439391-7439508)
chr2 (197-314)||(10357486-10357603)
chr2 (197-314)||(20721236-20721353)
chr2 (27-131)||(30784185-30784290)
chr2 (197-314)||(31436208-31436325)
chr2 (27-112)||(35498588-35498673)
chr2 (197-321)||(42274301-42274425)
chr2 (203-314)||(44286691-44286802)
chr2 (29-107)||(33031087-33031165)
chr2 (27-124)||(6457266-6457363)
chr2 (27-124)||(25100585-25100681)
chr2 (197-314)||(43932741-43932858)
chr2 (27-110)||(3043573-3043656)
chr2 (203-314)||(33031227-33031338)
chr2 (27-113)||(7439220-7439306)
chr2 (30-112)||(8738022-8738104)
chr2 (27-113)||(20721425-20721511)
chr2 (27-113)||(43932943-43933029)
chr2 (27-112)||(8392537-8392622)
chr2 (197-318)||(8737814-8737935)
chr2 (197-314)||(33832131-33832247)
chr2 (27-124)||(37593074-37593171)
chr2 (27-124)||(42274499-42274596)
chr2 (27-112)||(44492883-44492968)
chr2 (29-112)||(36512185-36512269)
chr2 (27-113)||(20719240-20719326)
chr2 (27-113)||(31771316-31771402)
chr2 (203-301)||(41120914-41121012)
chr2 (197-270)||(25666209-25666282)
chr2 (197-314)||(44493055-44493172)
chr2 (198-314)||(21439839-21439955)
chr2 (34-113)||(31436045-31436124)
chr2 (27-113)||(44286889-44286978)
chr2 (27-113)||(21440028-21440114)
chr2 (197-271)||(34073622-34073696)
chr2 (197-271)||(37592929-37593003)
chr2 (197-314)||(3043368-3043485)
chr2 (197-314)||(14200971-14201088)
chr2 (27-124)||(42487867-42487963)
chr2 (197-264)||(6457437-6457505)
chr2 (197-301)||(44879738-44879842)
chr2 (38-126)||(44879907-44879995)
chr2 (27-109)||(7654925-7655007)
chr2 (197-270)||(33000913-33000987)
chr2 (27-113)||(20719949-20720033)
chr2 (27-92)||(23787773-23787838)
chr2 (29-113)||(14201177-14201260)
chr2 (27-99)||(20701256-20701328)
chr2 (197-245)||(30784355-30784403)
chr2 (197-271)||(36512025-36512099)
chr2 (228-314)||(25100787-25100872)
chr2 (197-250)||(29809401-29809454)
chr2 (27-82)||(21439296-21439351)
chr2 (31-112)||(33001071-33001150)
chr2 (27-80)||(18672259-18672312)
chr2 (29-118)||(4327812-4327898)
chr2 (34-113)||(13027657-13027735)
chr2 (27-113)||(34073782-34073865)
chr2 (27-113)||(40365093-40365179)
chr2 (203-321)||(36881197-36881315)
chr2 (204-309)||(10287309-10287413)
chr2 (197-269)||(3118145-3118216)
chr2 (27-63)||(20720809-20720845)
chr2 (204-271)||(42487718-42487786)
chr2 (197-264)||(8392382-8392449)
chr2 (28-99)||(24951214-24951284)
chr2 (197-267)||(32318997-32319068)
chr2 (43-82)||(36881116-36881155)
chr2 (34-124)||(3117981-3118070)
chr2 (212-262)||(19058702-19058752)
chr2 (34-122)||(32318223-32318311)
chr2 (34-99)||(32319168-32319232)
chr2 (34-99)||(32319745-32319809)
chr2 (221-269)||(3118684-3118732)
chr2 (29-113)||(9111571-9111654)
chr2 (27-63)||(18673071-18673107)
chr2 (197-245)||(20720119-20720167)
chr2 (27-63)||(42487053-42487089)
chr2 (27-63)||(44493759-44493795)
[»] scaffold1160 (2 HSPs)
scaffold1160 (197-314)||(1331-1448)
scaffold1160 (29-112)||(1159-1242)
[»] scaffold0003 (3 HSPs)
scaffold0003 (197-314)||(240019-240136)
scaffold0003 (27-113)||(240208-240294)
scaffold0003 (27-96)||(239492-239561)
[»] scaffold0125 (1 HSPs)
scaffold0125 (203-314)||(21757-21868)
[»] scaffold0514 (2 HSPs)
scaffold0514 (27-113)||(6384-6470)
scaffold0514 (210-268)||(6227-6285)
[»] scaffold1190 (2 HSPs)
scaffold1190 (27-124)||(389-486)
scaffold1190 (210-314)||(209-313)
[»] scaffold0097 (6 HSPs)
scaffold0097 (197-314)||(25064-25181)
scaffold0097 (27-113)||(25253-25339)
scaffold0097 (27-113)||(23078-23164)
scaffold0097 (27-113)||(23787-23871)
scaffold0097 (27-63)||(24647-24683)
scaffold0097 (197-245)||(23957-24005)
[»] scaffold0571 (2 HSPs)
scaffold0571 (27-131)||(8430-8534)
scaffold0571 (197-263)||(8623-8690)
[»] scaffold0707 (2 HSPs)
scaffold0707 (30-124)||(7098-7192)
scaffold0707 (220-271)||(6951-7002)
[»] scaffold0001 (1 HSPs)
scaffold0001 (197-271)||(158077-158151)
[»] scaffold0036 (2 HSPs)
scaffold0036 (29-113)||(17585-17669)
scaffold0036 (197-314)||(17384-17500)
[»] scaffold0199 (1 HSPs)
scaffold0199 (27-126)||(6204-6303)
[»] scaffold0651 (3 HSPs)
scaffold0651 (197-314)||(6869-6987)
scaffold0651 (34-124)||(7061-7151)
scaffold0651 (27-63)||(5819-5855)
[»] scaffold0640 (2 HSPs)
scaffold0640 (27-109)||(4106-4188)
scaffold0640 (197-313)||(3900-4016)
[»] scaffold0148 (3 HSPs)
scaffold0148 (27-113)||(35273-35359)
scaffold0148 (198-314)||(35445-35561)
scaffold0148 (27-92)||(38609-38674)
[»] scaffold0093 (1 HSPs)
scaffold0093 (27-113)||(48967-49053)
[»] scaffold0734 (2 HSPs)
scaffold0734 (34-110)||(3359-3436)
scaffold0734 (210-314)||(2858-2962)
[»] scaffold0385 (3 HSPs)
scaffold0385 (27-113)||(10159-10245)
scaffold0385 (197-271)||(10011-10087)
scaffold0385 (27-95)||(9424-9491)
[»] scaffold0627 (2 HSPs)
scaffold0627 (197-271)||(7103-7177)
scaffold0627 (27-112)||(6931-7016)
[»] scaffold0051 (1 HSPs)
scaffold0051 (197-267)||(52520-52590)
[»] scaffold0024 (1 HSPs)
scaffold0024 (198-312)||(47860-47974)
[»] scaffold0005 (2 HSPs)
scaffold0005 (34-124)||(282940-283029)
scaffold0005 (197-250)||(283308-283361)
[»] scaffold0245 (1 HSPs)
scaffold0245 (29-82)||(25014-25066)


Alignment Details
Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 101)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 38706739 - 38706639
Alignment:
Q  24 tcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  38706739 tcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtgcttgtgcaaaa 38706640  T
Q  124 a 124  Q
    |    
T  38706639 a 38706639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 14122038 - 14121944
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  14122038 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaa 14121944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 5250684 - 5250579
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatg-caaaaat 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| |||||||    
T  5250684 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttactgacgtgttaagaacattactaaaagttcctatgccaaaaat 5250585  T
Q  126 tgtcgc 131  Q
    ||||||    
T  5250584 tgtcgc 5250579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 25102255 - 25102158
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  25102255 tcaattcaaatttgtttaatttatgtttaaactctcgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaaaaa 25102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 36471121 - 36471021
Alignment:
Q  24 tcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||| ||||    
T  36471121 tcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagatgtattaagaacgttaccaaaagttcctatgtaaaa 36471022  T
Q  124 a 124  Q
    |    
T  36471021 a 36471021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 44265446 - 44265543
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||||    
T  44265446 tcaatttaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaa 44265543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 6590263 - 6590360
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| | ||||||||    
T  6590263 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttggagacgtgttaagaacattactaaaagttcctctgcaaaaa 6590360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 9252645 - 9252742
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| | ||||||||    
T  9252645 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttcctttgcaaaaa 9252742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 36470947 - 36470830
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||        ||||||||||||| ||     
T  36470947 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttatcttaaaaaaatcgttcaaaaattgaag 36470848  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  36470847 agtttaaggataattaaa 36470830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 6413563 - 6413477
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  6413563 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacatcactaaaagttc 6413477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 36063558 - 36063441
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||        ||||||||||||||||     
T  36063558 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcataatgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 36063459  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  36063458 agtttaaggataattaaa 36063441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 21135321 - 21135407
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  21135321 tcaattcaaatttgtttaatttatgtttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 21135407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 27875745 - 27875643
Alignment:
Q  22 catcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaa 121  Q
    |||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||| | |||||    
T  27875745 catcctcaattcaaatttgtttattttatgcttaaactcttgagcttttgaacaattttttacaaacgtgttaaaaacattactaaaagttcctctgcaa 27875646  T
Q  122 aaa 124  Q
    |||    
T  27875645 aaa 27875643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 28015926 - 28015824
Alignment:
Q  22 catcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaa 121  Q
    |||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||| | |||||    
T  28015926 catcctcaattcaaatttgtttattttatgcttaaactcttgagcttttgaacaattttttacaaacgtgttaaaaacattactaaaagttcctctgcaa 28015827  T
Q  122 aaa 124  Q
    |||    
T  28015826 aaa 28015824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 43623087 - 43623001
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||| ||| |||||||||||||    
T  43623087 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaaaaacattactaaaagttc 43623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 23483513 - 23483630
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||        | ||||||||||||||     
T  23483513 catatttaattcgtttcatgttaaaaaactctaaattttaataaatgaacctttcatagtgttctaaacttgtctcaaaaaaattgttcaaaaatttaag 23483612  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  23483613 agtttaaggataattaaa 23483630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 41281424 - 41281307
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||        ||||| ||||||||||     
T  41281424 catatttaattcgtttcatgttaaaaaattctaaactttagtaattgaacctttcatagtgttctaaacttgtctaaaaaaaatcgtttaaaaatttaag 41281325  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  41281324 agtttaaggataattaaa 41281307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 44265617 - 44265734
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||        ||||| ||||||||||     
T  44265617 catatttaattcttttcatgttaaaaaattctaaattttagcaaatgaacctttcatagtgttctaaacttgtctcgaaaaaatcgtttaaaaatttaag 44265716  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  44265717 agtttaaggataattaaa 44265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 42499502 - 42499386
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  42499502 catatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtct-caaaaaatcgttcaaaaatttaag 42499404  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  42499403 agtttaagaataattaaa 42499386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 24451653 - 24451727
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  24451653 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtct 24451727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 38706565 - 38706491
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  38706565 catatctaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatattgttctaaacttgtct 38706491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 5696205 - 5696108
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| | ||| | ||||||| | ||||||||    
T  5696205 tcaattcaaatttgtttaatttatgattaaactcttcagtttttgaacaattttttgcagacgtgttaagatcattattgaaagttcctctgcaaaaa 5696108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 6018037 - 6018134
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||| |||||| ||||| |||||| ||| ||||||||||||| | ||||||||    
T  6018037 tcaattcaaatttgtttaatttatgcataaactcttgagtttttgaacagttttttgcagacatgttaaaaacattactaaaagttcctctgcaaaaa 6018134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 8784576 - 8784661
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| | |||||||||||||| ||||||||||||    
T  8784576 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttaaacaagtttttgctgacgtgttaagaacattactaaaagtt 8784661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 21135492 - 21135609
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||        ||||||||||||||||     
T  21135492 catatttaattcgtttcattttaaaaaattctaaattttagtaattgaacctttcataatgttctaaatttgtctcaaaaaaatcgttcaaaaatttaag 21135591  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  21135592 agtttaaggataattaaa 21135609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 25102084 - 25101967
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||        | |||||||| |||||     
T  25102084 catatttaattcgtttcatgttaaaaaattctaaattttagtaagtgaacctttcatagtgttttaaacttgtctcaaaaaaattgttcaaaagtttaag 25101985  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  25101984 agtttaaggataattaaa 25101967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 35369359 - 35369476
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| |||        ||||||||||||||||     
T  35369359 catatttaattcgtttcatgttaaaaaattctaaattttagcaattgaacctttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaag 35369458  T
Q  297 agtttgaggataattaaa 314  Q
    | ||| ||||||||||||    
T  35369459 actttaaggataattaaa 35369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 35863210 - 35863327
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||        | |||||||| |||||     
T  35863210 catatttaattcgtttcatgttaaaaaattttaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaatattgttcaaaagtttaag 35863309  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  35863310 agtttaaggataattaaa 35863327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 28755469 - 28755386
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||| ||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  28755469 tcaatccaaatttgtttaatttatgcttaaattcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaag 28755386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 13323845 - 13323763
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||    
T  13323845 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaa 13323763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 17062639 - 17062553
Alignment:
Q  45 atttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaattgtcgc 131  Q
    ||||||| ||||||| |||||||||||||||||||| || ||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  17062639 atttatgcttaaacttttgagtttttgaacaattttgtatagacgtgttaagaacattattaaaagttcttctgcaaaaattgtcgc 17062553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 17498616 - 17498542
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17498616 catatttaattcgtttcatattaaaaaattctaaattttagtaaatgaatcttttatagtgttctaaacttgtct 17498542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 17585719 - 17585805
Alignment:
Q  45 atttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaattgtcgc 131  Q
    ||||||| ||||||| |||||||||||||||||||| || ||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  17585719 atttatgcttaaacttttgagtttttgaacaattttgtatagacgtgttaagaacattattaaaagttcttctgcaaaaattgtcgc 17585805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 24451482 - 24451568
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||||||||| |||||||||||||    
T  24451482 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtgtagacgtgttaagaacattactaaaagttc 24451568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 41590631 - 41590545
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||  || ||||||||||||| |||||||||||||    
T  41590631 tcaattcaaatttgtttaatttgtgcttaaactcttgagcttttgaacaatttttcgcatacgtgttaagaacattactaaaagttc 41590545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 5250512 - 5250395
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||  || ||||| || ||||||        ||||||||||||||||     
T  5250512 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcgcagcgttctgaatttgtctcaaaaaaatcgttcaaaaatttaag 5250413  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  5250412 agtttaaggataattaaa 5250395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 5696035 - 5695918
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||        || |||||||||||||     
T  5696035 catatttaattcatctcatattaaaaaattctaaattttagtaaatgaacctttcatagtgttttaaacttgtctcgaaaaaatcattcaaaaatttaag 5695936  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  5695935 agtttaaggataattaaa 5695918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 6018208 - 6018325
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||        | ||||||||||||||     
T  6018208 catatttaatttgtttcatgttaaaaaattataaattttagtaaatgaacctttcataatgttctaaacttgtctcataaaaattgttcaaaaatttaaa 6018307  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  6018308 agtttaagaataattaaa 6018325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 17498787 - 17498690
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| | | |||||  ||||||||||||| | ||||||||    
T  17498787 tcaattcaaatttgtttaatttatgcttaaacttttgagtttttgaacaattttttgcagacatataaagaaaattactaaaagttcctctgcaaaaa 17498690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 21160077 - 21159988
Alignment:
Q  24 tcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| || || |||||||||| | |||||||||||    
T  21160077 tcatcaattcaaatttgtttaatttatgcttatacttttgagtttttgaacaattttttgcaaacatgttaagaacatcactaaaagttc 21159988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 33322531 - 33322628
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||  |||||||| ||||||||  ||||||||||| |||||||||||| ||| ||||||||||||| | ||||||||    
T  33322531 tcaattcaaatttgtttaatttatacttaaactcatgagttttcaaacaattttttgcagacgtgttaaaaacattactaaaagttcctctgcaaaaa 33322628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 41590460 - 41590344
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||         | ||||||||||||||     
T  41590460 catatttaattcgtttcatgttaaaaaattctaaattttagt-aatgaacctttcatagtgttataaacttgtcataaaaaaattgttcaaaaatttaaa 41590362  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  41590361 agtttaaggataattaaa 41590344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 33322703 - 33322819
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |        |||||||||| ||||| |    
T  33322703 atatttaattcgtttcatgttaaaaaaatctaaattttggtaaatgaacctttcatagtgttctaaacttgtattgaaaaaatcgttcaaaattttaaga 33322802  T
Q  298 gtttgaggataattaaa 314  Q
    |||| | ||||||||||    
T  33322803 gtttaaagataattaaa 33322819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 37706845 - 37706729
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||| |||||||        ||||||||||||||||     
T  37706845 catatttaattcgtttcatgttagaaaattctaaattttaataattgaacctttcatagtgttctaatcttgtct-aaaaaaatcgttcaaaaatttaag 37706747  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  37706746 agtttaaggataattaaa 37706729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 35863039 - 35863122
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| ||||||||||    
T  35863039 tcaattcaaatttatttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaag 35863122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 17062487 - 17062413
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  17062487 catatttaattcgtttgatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttttaaacttgtct 17062413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 17585871 - 17585945
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  17585871 catatttaattcgtttgatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttttaaacttgtct 17585945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 27875569 - 27875495
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  27875569 catatttaattcatttaatgttaaaaaattctaaattttagtaaatgaacctttaatagtgttctaaacttgtct 27875495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 28015750 - 28015676
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  28015750 catatttaattcatttaatgttaaaaaattctaaattttagtaaatgaacctttaatagtgttctaaacttgtct 28015676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 37967705 - 37967779
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||    
T  37967705 catatttaattcgtttcatgttaaaaatatctaaattttggtaaatgaacctttcatagtgttctaaacttgtct 37967779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 39336991 - 39337077
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||   |||||||||||||| |||||||||||||    
T  39336991 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgttgacgtgttaagaacattactaaaagttc 39337077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 5765838 - 5765721
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |        ||||| ||||||||||     
T  5765838 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaag 5765739  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  5765738 agtttaaggataattaaa 5765721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 17842633 - 17842706
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| ||||    
T  17842633 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaactttttatagtgttctaaacatgtc 17842706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 18840040 - 18839923
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| | ||         |||||| |||||||||     
T  18840040 catatttaattcgtttcatgttaaaaaattctaagttttagtagatgaacctttcatagtgttctaaacatatccaaaaaaaatcgttcgaaaatttaag 18839941  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  18839940 agtttaaggataattaaa 18839923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 35369188 - 35369273
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||||||||| || ||||||| ||||||| |||||||||||  ||||||||||| ||| ||||||||||||    
T  35369188 tcaattcaaatttgtttaatttatgcttcaactcttaagttttttaacaattttttgtagacgtgttaacaacattactaaaagtt 35369273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 36063718 - 36063630
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatt--ttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||||  ||||  ||||||||||||||| |||||||||||||    
T  36063718 tcaattcaaatttgtttaatttatgtttaaattcttaagttttttaacaattttttttgtagacgtgttaagaacattactaaaagttc 36063630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 39337149 - 39337266
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| ||||||||||| | ||||||||| ||| |||| |||||||||||||||||||||||||        || |||||||||||||     
T  39337149 catatttaattcgtttaatgttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaagattcattcaaaaatttaag 39337248  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  39337249 agtttaaggataattaaa 39337266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 42499673 - 42499576
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||| |||||||||||||||  |||||| || ||||||||||||||||||| ||||||| |||||||| |||||||||| |  ||||||||||    
T  42499673 tcaattcaattttgtttaatttatgcataaactattaagtttttgaacaattttttgcagacgtattaagaacattactaaaagcttatatgcaaaaa 42499576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 5766012 - 5765927
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatt--ttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||| ||||||||||||||||||| |||||||||  ||||||| |||||||  ||||||||||||||||||||||||| ||||||    
T  5766012 tcaatccaaatttgtttaatttatgcttaaactctgaagtttttcaacaattttttttacagacgtgttaagaacgttattaaaag 5765927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 6590434 - 6590552
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaat-tctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| |||||  |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||        | ||||||||||||||    
T  6590434 catatttaatttttttcatgttaaaaaaaatctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatggttcaaaaatttaa 6590533  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| || |||||||||    
T  6590534 gagtttaagaataattaaa 6590552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 30658731 - 30658647
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||    
T  30658731 tcaattcaaatttgtttaatt-atgcttaa-ctcttgagtttttaaacaattttttgcagacgtattaagaacattactaaaagttc 30658647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 37967533 - 37967615
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    |||||||||||||||||||||||||  |||||||||||| |||| ||||||||||  ||||||||| |||||| |||||||||    
T  37967533 tcaattcaaatttgtttaatttatgcataaactcttgagcttttaaacaatttttcgcagacgtgtaaagaacattactaaaa 37967615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 18840211 - 18840114
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||  |||||||||  |||||||||||||||||||  | | ||||||||||| |||||| |||||| | ||||||||    
T  18840211 tcaattcaaatttgtttaatttatacttaaactctcaagtttttgaacaattttttgtacatgtgttaagaacattactagaagttcctctgcaaaaa 18840114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 28755297 - 28755225
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  28755297 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgt 28755225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 43936632 - 43936521
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    ||||||||||||||||||||||   |||||||| |||||| || ||||||||| |||| ||||||||||        |||||||||||||||| |||||     
T  43936632 taattcgtttcatgttaaaaaaaattaaattttggtaaataaatctttcatagcgttcaaaacttgtcttaaaaaaatcgttcaaaaatttaagagttta 43936533  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  43936532 aggataattaaa 43936521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 8784747 - 8784817
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| |||||| ||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  8784747 catatttaattctttttatgttaaaaaattttaaattttagtaaatgaaccttttatagtgttctaaactt 8784817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 16473151 - 16473269
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattc-taaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||||||||||||||||||||    ||||||||||||| |||| |||||||||||||||||| ||||||        || |||||||||||||    
T  16473151 catatttaattcgtttcatgttaaaaaaaaaataaattttagtaattgaacctttcatagtgttctaaatttgtctcaaaaaaatcattcaaaaatttaa 16473250  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  16473251 gagtttaaggataattaaa 16473269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 16477722 - 16477840
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattc-taaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||||||||||||||||||||    ||||||||||||| |||| |||||||||||||||||| ||||||        || |||||||||||||    
T  16477722 catatttaattcgtttcatgttaaaaaaaaaataaattttagtaattgaacctttcatagtgttctaaatttgtctcaaaaaaatcattcaaaaatttaa 16477821  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  16477822 gagtttaaggataattaaa 16477840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 36018109 - 36018193
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||| |||||||||||  |||||||||||||||| || ||||||||    
T  36018109 tcaatccaaatttgtttcatttatgcttaaactcttaagtttttcaacaatttttt-tagacgtgttaagaacgctattaaaagtt 36018193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 39337813 - 39337745
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaa 95  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| |||||||    
T  39337813 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaa 39337745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 43622915 - 43622840
Alignment:
Q  197 catatctaattcgtttcatgttaa-aaaattctaaatttt-agtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||| | ||||||||||||| ||||||||||    
T  43622915 catatttaattcgtttcatgttaaaaaaattctaaattttaagtaaatgcacctttcatagtgttataaacttgtc 43622840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 41255335 - 41255389
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttt 81  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  41255335 tcaattcaaatttgtttaattagtgtttaatctcttgagtttttgaacaattttt 41255389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 41281593 - 41281509
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| ||||||||||||||||||||||||||||| | ||||| ||||| |||||  |||||| |||||||| |||||||||||||    
T  41281593 tcaatttaaatttgtttaatttatgtttaaactctt-aattttttaacaa-tttttgtagacgtcttaagaacattactaaaagttc 41281509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 43988277 - 43988207
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| ||| || ||| |||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  43988277 catatttaactcattttatgttaaaaaattctaaattttagtatataaacctttcatagtgttctaaactt 43988207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 30968853 - 30968950
Alignment:
Q  217 ttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||         |||| |||||||||| ||||| ||||||||||||    
T  30968853 ttaaaaaattctaaattttagtaaacgaacatttcatattgttctaaacttgtctaaaaaaaaccgtttaaaaatttaagagtttaaggataattaaa 30968950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 17842463 - 17842547
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagt 111  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  | || |||||| ||| |||||| ||||    
T  17842463 tcaattcaaatttgtttaatttatacttaaactcttaagtttttcaacaattttttgtatacatgttaaaaacattactagaagt 17842547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 10409789 - 10409875
Alignment:
Q  37 tttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||| ||||||||||| || || ||||||||||||| || | || ||||||||||| ||||||||||||| | ||||||||    
T  10409789 tttgtttaatt-atgtttaaacttttaagattttgaacaatttcttgcggaagtgttaagaacattactaaaagttcatctgcaaaaa 10409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 10410018 - 10410133
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||||||||||||||||||||||| ||||||||| ||||  || |||| ||||||| |||        ||||||||||||||||     
T  10410018 catatttaattcatttcatgttaaaaaattctaaattttggtaaatgaatcttttgtaatgttttaaacttatcttaaaaaaatcgttcaaaaatttaag 10410117  T
Q  297 agtttgaggataatta 312  Q
    | | | ||||||||||    
T  10410118 actctaaggataatta 10410133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 35369984 - 35369929
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| || ||||||||    
T  35369984 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaataatttttt 35369929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 37707009 - 37706930
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||| ||||||||| ||||||||||  |||||| |||||||||||  |||||| || ||||| |||||||||||||    
T  37707009 aaatttgtgtaatttatgcttaaactcttatgttttttaacaattttttgtagacgtattgagaacattactaaaagttc 37706930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 18304790 - 18304716
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||| | |||| |||| |||||||||| | ||||||| ||||||||||||||||||| |||||    
T  18304790 catatttaattcgtttgaagttacaaaaatctaaattttggaaaatgaacctttcatagtgttctaaacatgtct 18304716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 6243642 - 6243715
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaa-ttttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||| ||| ||||  || ||||||||||||||    
T  6243642 catatttaatttgtttcatgttaaaaaattctaaatttttagtaaacgaaccttttgtaatgttctaaacttgt 6243715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 21159902 - 21159841
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgt 258  Q
    |||| |||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  21159902 atatttaatccgtttcatattaaaaaaattctaaattttagtaaatgaacctttcatagtgt 21159841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 36018295 - 36018356
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||||||| |||| |||||| |||||||| |||| ||||||||| ||||||||||    
T  36018295 tttcatgttaaaaaaatctagattttaataaatgaaccttttatagtgttcaaaacttgtct 36018356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 3865862 - 3865934
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||| ||||||||| ||| ||||  || ||||||||||||||    
T  3865862 catatttaatttatttcatgttaaaaaattctaaagtttagtaaacgaacctttagtaatgttctaaacttgt 3865934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 6244296 - 6244224
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| |||  |||  || ||||||||||||||    
T  6244296 catatttaatttatttcatgttaaaaaattctaaattttagtaaacgaatattttgtaatgttctaaacttgt 6244224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 32244690 - 32244607
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||| |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| ||||||||    
T  32244690 aatttaaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttc 32244607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 32514318 - 32514242
Alignment:
Q  48 tatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||| ||||||| || || |||| |||||||||||||||| ||||||||||| ||||||| ||||| | ||||||||    
T  32514318 tatgcttaaacttttaagattttaaacaattttttacagaagtgttaagaacattactaatagttcatctgcaaaaa 32514242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 13323673 - 13323634
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaatttta 236  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  13323673 catatttaattcgtttcatgttaaaaaattctaaatttta 13323634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 32243861 - 32243920
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||||||||||||||| |||||||||||||| ||| ||||  || ||||||||||||||    
T  32243861 tttcatgttaaaaaattataaattttagtaaacgaacctttagtaatgttctaaacttgt 32243920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 32514166 - 32514051
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaat-tctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    |||| |||||| |||||||||||||||  |||||||||||||||| ||| ||||  ||  |||||||||||||||        ||||| ||||||||||     
T  32514166 atatttaattcatttcatgttaaaaaaaatctaaattttagtaaacgaaccttttgtaacgttctaaacttgtctcaaaataatcgtttaaaaatttaag 32514067  T
Q  297 agtttgaggataatta 312  Q
    ||||| ||||||||||    
T  32514066 agtttaaggataatta 32514051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 44894698 - 44894620
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| ||||||||    
T  44894698 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttc 44894620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 2826919 - 2826965
Alignment:
Q  67 ttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||    
T  2826919 ttttgaacaattttttgcagacgtgttaaaaacattactaaaagttc 2826965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 30968670 - 30968746
Alignment:
Q  37 tttgtttaatttatgtttaaactcttgagtttttgaacaatt-ttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||||||||  ||||||||| ||||||| ||||||| |||| || ||||||| | ||| ||||||||||||    
T  30968670 tttgtttaatttatgcataaactcttaagtttttaaacaattattttgcatacgtgtttataacattactaaaagtt 30968746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 36126455 - 36126497
Alignment:
Q  229 aaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  36126455 aaattttagtaaatgaaccttttatagtgttttaaacttgtct 36126497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 3866647 - 3866590
Alignment:
Q  67 ttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||| || | ||||||||||  |||| |||||||| ||||||||||    
T  3866647 ttttgaacaattttttgcacaagtgttaagaatattacgaaaagttcatatgcaaaaa 3866590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 43988446 - 43988369
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaa 107  Q
    ||||||||||||||||||| ||||| |||||||||| |||||| ||||| | |||| |  | ||||| |||||||||||||    
T  43988446 tcaattcaaatttgtttaa-ttatgcttaaactcttaagttttcgaacattattttgc--atgtgtttagaacgttactaa 43988369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 13323183 - 13323219
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  13323183 tcaattcaaatttgttcaatttatgcttaaactcttg 13323219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 35863957 - 35863921
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  35863957 tcaattcaaatttgttcaatttatgcttaaactcttg 35863921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 36062804 - 36062840
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  36062804 tcaattcaaatttgttcaatttatgcttaaactcttg 36062840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 37706135 - 37706171
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  37706135 tcaattcaaatttgttcaatttatgcttaaactcttg 37706171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 92)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 43597779 - 43597682
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  43597779 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaaaaa 43597682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 4926372 - 4926458
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  4926372 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttaaacaattttttacagacgtgttaagaacattactaaaagttc 4926458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 4883908 - 4883811
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  4883908 tcaatttaaatttgtttaatttatgtttaaactcttgagtttttgaataattttttacagacgtgttaagaacattactaaacgttcctatgcaaaaa 4883811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 6588687 - 6588773
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  6588687 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttc 6588773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 18059177 - 18059300
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||     
T  18059177 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtc--caaaaaatcgttcaaaaatttaag 18059274  T
Q  297 agtttgaggataattaaataaatttg 322  Q
    ||||| |||||||||||| |||||||    
T  18059275 agtttaaggataattaaacaaatttg 18059300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 38159123 - 38159240
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  38159123 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 38159222  T
Q  297 agtttgaggataattaaa 314  Q
    ||| | ||||||||||||    
T  38159223 agtgtaaggataattaaa 38159240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 43597608 - 43597491
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||| ||||||||||     
T  43597608 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaataaatcgttaaaaaatttaag 43597509  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  43597508 agtttaaggataattaaa 43597491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 46044415 - 46044298
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  46044415 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 46044316  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  46044315 agtttaaggataattaaa 46044298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 47791838 - 47791935
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| | ||||||||    
T  47791838 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttaaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaa 47791935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 4926546 - 4926663
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||        ||||||||||||||||     
T  4926546 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaag 4926645  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| | ||||||||||    
T  4926646 agtttaaagataattaaa 4926663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 6331067 - 6331184
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||        ||||||||||||||||     
T  6331067 catatttaattcatttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttttaaacttgtctcaaaaaaatcgttcaaaaatttaag 6331166  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  6331167 agtttaaggataattaaa 6331184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 7238700 - 7238583
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||        ||| ||||||||||||     
T  7238700 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcataatgttctaaacttgtctcaaaaaaatcgatcaaaaatttaag 7238601  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  7238600 agtttaaggataattaaa 7238583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 18059006 - 18059103
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||||| |||| | ||||||||    
T  18059006 tcaattcaaatttgtttaatttatgtttaaactcttgagttttcgaacaaatttttgcagacgtgttaagaaagttactaaaggttcctctgcaaaaa 18059103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 22378582 - 22378465
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||        ||||||||||||||||     
T  22378582 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgtacctttcgtagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 22378483  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  22378482 agtttaaggataattaaa 22378465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 22378753 - 22378656
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  22378753 tcaatttaaatttgtttaatttatacttaaactattgagtttttgaacagttttttacagacatgttaagaacgttactaaaagttcctatgcaaaaa 22378656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 38158948 - 38159050
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaa----ctcttgagtttttgaacaatttt-ttacagacgtgttaagaacgttactaaaagttcttatgcaa 121  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  38158948 tcaattcaaatttgtttaatttatgtttaaattaactcttgagtttttgaacaatttttttacagacgtgttaagaacattactaaaagttcctatgcaa 38159047  T
Q  122 aaa 124  Q
    |||    
T  38159048 aaa 38159050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 10620644 - 10620527
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||        ||||||||||||||||     
T  10620644 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacttttcatagtgttcaaaacttgtcttaatgaaatcgttcaaaaatttaag 10620545  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  10620544 agtttaagaataattaaa 10620527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 44167918 - 44167801
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||        ||||||||||||||||     
T  44167918 catatttaattcatttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttataaacttgtctaaaaaaaatcgttcaaaaatttaag 44167819  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  44167818 agtttaaggataattaaa 44167801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 6588859 - 6588975
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||         |||||||||||||||| |    
T  6588859 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcctagtgttataaacttgtcataaaaaaatcgttcaaaaatttaaga 6588958  T
Q  298 gtttgaggataattaaa 314  Q
    |||| ||||||||||||    
T  6588959 gtttaaggataattaaa 6588975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 15653085 - 15653001
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  15653085 aattcaaatttgtttaatttatgcttaaactcttaaatttttgaacaattttttacaaacgtgttaagaacattactaaaagttc 15653001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 7238871 - 7238788
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||    
T  7238871 tcaattcaaatttgtttaatttatgcttaaactcttgaggttttgaacaattttttgcagacgtgttaagaacattattaaaag 7238788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 1961897 - 1961994
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||| ||||||| ||||| | ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| | ||||||||    
T  1961897 tcaattcaaatttgtttcatttatgcttaaatttttgagtttttgaacaatttttcacagacgtgtttagaacattactaaaagttcatctgcaaaaa 1961994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 14990837 - 14990744
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||| | ||||||||    
T  14990837 ttcaaatttgtttaatttattcttaaactcttgagtttttgaacaattttttgcatacgtgttaggaacattactaaaagttcctctgcaaaaa 14990744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 15420448 - 15420355
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||| | ||||||||    
T  15420448 ttcaaatttgtttaatttattcttaaactcttgagtttttgaacaattttttgcatacgtgttaggaacattactaaaagttcctctgcaaaaa 15420355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 35482351 - 35482254
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || || |||||||||  ||| ||||||||| | ||||||||    
T  35482351 tcaattcaaatttgtttaatttatgtttaaactattgagtttttgaacaattttttgcatacatgttaagaaaattattaaaagttcctctgcaaaaa 35482254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 38199220 - 38199337
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||| | | |||| |||||||||| ||||||||||||||        ||||||||||||||||     
T  38199220 catatttaattcgtttcatgttaaaaaattctaaattttattgattgaacctttcatagtattctaaacttgtctcaaaaaattcgttcaaaaatttaag 38199319  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  38199320 agtttaaggataattaaa 38199337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 43083979 - 43083862
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  43083979 catatttaatttttttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 43083880  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  43083879 agtttaaggataattaaa 43083862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 43574239 - 43574324
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| ||||| |||||| |||||    
T  43574239 tcaattcaaatttgtttaatttatgtttaaactcttaagtttttgaacaattttttgcagacatgtttagaacattactataagtt 43574324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 47792009 - 47792126
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||        | ||||||||||||||     
T  47792009 catatttaattcgtttcatgttaaaaaaatctaaattttggtagatgaacctttcatagtgttctaaacttgtcttaaaaacattgttcaaaaatttaag 47792108  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  47792109 agtttaaggataattaaa 47792126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 33624958 - 33625030
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  33624958 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgt 33625030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 46330970 - 46331044
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  46330970 catatttaattcgttacatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtct 46331044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 1962077 - 1962186
Alignment:
Q  205 attcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgag 304  Q
    |||||||||||||||||||||||||||||||| |||||  | |||||||||||||||| ||||||||        |||||||||||||||| ||||| ||    
T  1962077 attcgtttcatgttaaaaaattctaaattttaataaattgacctttcatagtgttctatacttgtctcaaaaatatcgttcaaaaatttaagagtttaag 1962176  T
Q  305 gataattaaa 314  Q
    ||||||||||    
T  1962177 gataattaaa 1962186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 21109642 - 21109545
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||| ||||||| |||||||||| | ||||||||||||||||| || ||||||| ||||| ||||||||||||| | ||||||||    
T  21109642 tcaattcaaatttgtttcatttatgcttaaactcttaaatttttgaacaattttttgcatacgtgtttagaacattactaaaagttcctctgcaaaaa 21109545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 38598967 - 38599048
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaa 108  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  38598967 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaatttttcacagacgtgttaagaacgttattaaa 38599048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 43084137 - 43084053
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagt 111  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||    
T  43084137 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagt 43084053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 3495655 - 3495742
Alignment:
Q  26 atcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||  |||||| ||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  3495655 atcaattcaaatttgtttaatttattcttaaacgcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 3495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 35482161 - 35482066
Alignment:
Q  219 aaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||        |||||||||||||||||||||| | ||||||||||    
T  35482161 aaaaaattctaaattttagtaaatgaacatttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaacagtttaaagataattaaa 35482066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 44168074 - 44167990
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||||||||| |||||||||||||    
T  44168074 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttc 44167990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 36019886 - 36019812
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| |||| |||||||||||    
T  36019886 catatctaattcgtttcatgttaaaaagttctaaattttagtaaatgaacatttcataatgttataaacttgtct 36019812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 38199062 - 38199148
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| || ||||||||||    
T  38199062 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattcctaaaagttc 38199148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 4899987 - 4899867
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||| ||||||        || |||||||||||||     
T  4899987 catatttaatttgtttcatgttagaaa-ttctaaattttagtaaatgaacctttcatagtgttataaatttgtctcaaaaaaatcattcaaaaatttaag 4899889  T
Q  297 agtttgaggataattaaataaa 318  Q
    ||||| ||||||||||||||||    
T  4899888 agtttaaggataattaaataaa 4899867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 11397252 - 11397167
Alignment:
Q  28 caattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||| |||| || ||||||||| ||| || ||||||||||    
T  11397252 caattcaaatttgtttaatttatgttcaaactcttaagtttttgaacaatcttttgcatacgtgttaaaaacattgctaaaagttc 11397167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 36020090 - 36020005
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||| | |||| |||||| ||||||||||||    
T  36020090 tcaatttaaatttgtttaatttatacttaaactcttgagtttttaaacaattttttacaaatgtgtcaagaacattactaaaagtt 36020005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 15130881 - 15130955
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||| || || ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  15130881 catatttaattcgtttaatatttaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtct 15130955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 46330799 - 46330885
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||| ||||||||||||| |||||||||  ||||||| |||||||||||  ||||| ||||||||| |||||||||||||    
T  46330799 tcaattcaaatatgtttaatttatgcttaaactctcaagttttttaacaattttttgtagacgcgttaagaacattactaaaagttc 46330885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 1544599 - 1544482
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||| |||||||||||| |||| |||| ||||||   ||||||||||||||||||||| ||        ||||||||||||||||     
T  1544599 catatttaattcgtttcaagttaaaaaattcaaaatcttagcaaatgagtttttcatagtgttctaaacttgactcaaaaatatcgttcaaaaatttaaa 1544500  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  1544499 agtttaaggataattaaa 1544482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 3495814 - 3495931
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| | ||||||||| ||| |||| ||||||||||||| |||||||| ||        || |||||||||||||     
T  3495814 catatttaattcgtttcatgttaaaaaaatttaaattttattaattgaatctttcatagtgttttaaacttgcctcaaaaaattcattcaaaaatttaag 3495913  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  3495914 agtttaaggataattaaa 3495931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 14990671 - 14990555
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |||        || |||||||| ||||     
T  14990671 catatttaattcatttcatgttaaaaaattataaattttagt-aatgaacctttcatagtgttctaaacttctctcaaaaaaatcattcaaaaacttaag 14990573  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  14990572 agtttaaggataattaaa 14990555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 15420282 - 15420166
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |||        || |||||||| ||||     
T  15420282 catatttaattcatttcatgttaaaaaattataaattttagt-aatgaacctttcatagtgttctaaacttctctcaaaaaaatcattcaaaaacttaag 15420184  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  15420183 agtttaaggataattaaa 15420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 27728051 - 27727998
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27728051 aattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttt 27727998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 38599139 - 38599211
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  38599139 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaatctttcatagtgttctaaacttgt 38599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 33624788 - 33624878
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatg 118  Q
    |||||| |||||||||||||||||| |||||||||| ||||||| ||||| |||||  ||||||||||||||| ||||||||| ||| ||||    
T  33624788 tcaatttaaatttgtttaatttatgcttaaactcttaagttttttaacaa-tttttgtagacgtgttaagaacattactaaaaattcatatg 33624878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 4900158 - 4900073
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||| ||||| |||| ||||| ||| |||||||||    
T  4900158 tcaattcaaatttgtttaatttatacttaaactcttaagttttt-aacaattttttgcagacttgtttagaacattaataaaagttc 4900073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 37539957 - 37540074
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||   | |||||||||  | |||        ||||||||||||||||     
T  37539957 catatttaattcatttcatgttaaaaaattctaaattttagtaaatgaaccttttgaaatgttctaaatatatctcggaaaaatcgttcaaaaatttaaa 37540056  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  37540057 agtttaaggataattaaa 37540074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 38199864 - 38199808
Alignment:
Q  26 atcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  38199864 atcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttttt 38199808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 43574412 - 43574484
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    |||| |||||||||||| |||| |||||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  43574412 atatttaattcgtttcaagttagaaaattctaaattttaataaatgaacattttatagtgttctaaacttgtc 43574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 45958953 - 45958867
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttac-agacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||| || |||||||||| ||||||| |||||||||||   ||||||||||| ||| |||||||||||||    
T  45958953 tcaattcaaatttgtttaatttctgcttaaactcttaagttttt-aacaatttttttgtagacgtgttaataacattactaaaagttc 45958867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 46044580 - 46044501
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| |||||||||| ||||||| |||||||||||  ||||||||||| ||| |||||||| ||||    
T  46044580 aaatttgtttaattaatgcttaaactcttaagttttttaacaattttttgtagacgtgttaaaaacattactaaatgttc 46044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 1066691 - 1066602
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| |||||||| ||||||||||    
T  1066691 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatatgcaaaaa 1066602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 11397060 - 11396965
Alignment:
Q  219 aaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||||||||||||||||||||||||  | |||| |||||| ||||| |||||        |||||||||||||||| ||||| ||||||||||||    
T  11397060 aaaaaattctaaattttagtaaatgatccattcacagtgttataaacctgtcttacacaaatcgttcaaaaatttaagagtttaaggataattaaa 11396965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 1065862 - 1065931
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaact 266  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| ||| ||||  || |||||||||||    
T  1065862 catatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaact 1065931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 1544769 - 1544685
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||| ||||||| ||||||| |  |||| ||||||||| |||| || ||||||||||||| ||| ||||||||    
T  1544769 tcaattcaaatttgtttgatttatgcttaaactttaaagttgttgaacaat-ttttccatacgtgttaagaacattattaaaagtt 1544685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 9633461 - 9633366
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    ||||||||||||||||||| ||| |||||||||| |||||| |||||||||||| ||||  | ||| |||| ||||||||||||| |  |||||||||    
T  9633461 aattcaaatttgtttaatt-atgcttaaactcttaagtttt-gaacaattttttgcagatattttatgaacattactaaaagttcctccgcaaaaatt 9633366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 1260142 - 1260225
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||| |||||||||| ||||||||||| || ||||||| | |||||||||  ||||||||||| ||| || ||||||||||    
T  1260142 aattcaaaattgtttaatt-atgtttaaacttttaagtttttaagcaattttttgaagacgtgttaaaaacattgctaaaagttc 1260225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 12621697 - 12621625
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| |||||||||||||| ||| ||||  || ||||||||||||||    
T  12621697 catatttaatttatttcatgttaaaaaattttaaattttagtaaacgaacctttagtaatgttctaaacttgt 12621625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 27727352 - 27727233
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa--ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaattta 294  Q
    ||||| |||||||||| ||| |||||||  |||||||||| ||| |||||| ||||| |||| ||||||||||||||        |||| ||||||||||    
T  27727352 catatttaattcgttttatggtaaaaaaaattctaaatttaagttaatgaacctttcttagtattctaaacttgtctcaaaaaaatcgtacaaaaattta 27727253  T
Q  295 acagtttgaggataattaaa 314  Q
    | ||||| | ||||||||||    
T  27727252 agagtttaaagataattaaa 27727233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 29156260 - 29156208
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattt 79  Q
    ||||||||||||| | ||||||||| |||||||||| ||||||||||||||||    
T  29156260 tcaattcaaatttatataatttatgcttaaactcttaagtttttgaacaattt 29156208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 3496478 - 3496423
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||| |||||||||||||| ||| |||||||||| ||||||| |||||||||||    
T  3496478 tcaatttaaatttgtttaattcatgcttaaactcttaagttttttaacaatttttt 3496423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 8081814 - 8081892
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| ||||||||    
T  8081814 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttc 8081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 37107863 - 37107922
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||||||| |||||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  37107863 tttcatgttgaaaaattctaaattttagtaaacgaacctttagtaatgttctaaacttgt 37107922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 37537487 - 37537553
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    |||||||||||| |||||| ||| |||||||||| ||||||||||||||||||| ||  |||||||||    
T  37537487 aattcaaatttggttaatt-atgcttaaactcttaagtttttgaacaattttttgcatgcgtgttaag 37537553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 44081152 - 44081203
Alignment:
Q  220 aaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||| ||||||    
T  44081152 aaaaattttaaattttagtaaatgaacctttcatagtattctaaatttgtct 44081203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 47139838 - 47139743
Alignment:
Q  219 aaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||||| ||||||||||||||||||| ||| |||| |||| |||||||||||        || |||||||||||||  |||| ||||||||||||    
T  47139838 aaaaaatactaaattttagtaaatgaaccttgcataatgttttaaacttgtctcaaaaaaatcattcaaaaatttaaatgtttaaggataattaaa 47139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 38593281 - 38593358
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| |||||||    
T  38593281 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcaaaagtgttaagaacattacgaaaagtt 38593358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 45958815 - 45958733
Alignment:
Q  232 ttttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||||||| |||| |||||||||||||||||||||||||        |||||||||||||||| ||||| |  |||||||||    
T  45958815 ttttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaagagtttaaaaataattaaa 45958733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 15131624 - 15131588
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15131624 tcaattcaaatttgtttaatttatgcttaaactcttg 15131588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 43083327 - 43083383
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgag-tttttgaacaatttttt 82  Q
    ||||||||||||||||||||||||  |||||||||| || ||||| |||||||||||    
T  43083327 tcaattcaaatttgtttaatttatacttaaactcttaagtttttttaacaatttttt 43083383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 38594697 - 38594756
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||||| |||| ||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  38594697 tttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttctaaacttgt 38594756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 16081055 - 16080966
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| |||||||||| |||||| |||||||| |||  | || |||||| ||  ||||||||||||| | ||||||||    
T  16081055 aaatttgtttaatt-atgcttaaactcttaagttttcgaacaattatttgtatacatgttaaaaatattactaaaagttcctctgcaaaaa 16080966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 42974215 - 42974161
Alignment:
Q  213 catgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||||||| ||||||||||||||||||| ||| ||||  || ||||||||||||    
T  42974215 catgttaaataattctaaattttagtaaacgaaccttttgtaatgttctaaactt 42974161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 44080958 - 44081043
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||| |||||||||| ||| |||||||||| ||||||  ||||   |||| || |||||||||||||  ||||||||||||    
T  44080958 tcaattcaaacttgtttaatt-atgcttaaactcttaagttttcaaacatgcttttgcaaacgtgttaagaacaatactaaaagttc 44081043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 17018656 - 17018571
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||| | |||||||||||||||| ||||| |||||||||||| ||   ||||| ||| | ||| ||||||| ||| ||||||||    
T  17018656 tcaattaatatttgtttaatttatgattaaagtcttgagtttttaaatggtttttgacatatgtgctaagaacattattaaaagtt 17018571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 29156090 - 29156045
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaat 242  Q
    ||||| ||||||||||||  ||||||||||||||||||| ||||||    
T  29156090 catatttaattcgtttcaaattaaaaaattctaaatttttgtaaat 29156045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 8081976 - 8082048
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| |||| ||||||||||||||||||| |||  |||  || ||||||||||||||    
T  8081976 catatttaatttatttcatgctaaataattctaaattttagtaaacgaacattttgtaatgttctaaacttgt 8082048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 8082586 - 8082539
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||||||||| ||| ||||||| ||||| ||||||||||||||||    
T  8082586 aaatttgtttaatt-atgcttaaacttttgagattttgaacaatttttt 8082539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 8832880 - 8832952
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| |||| |  |||||||||||||||||||| ||||  || ||||||||||||||    
T  8832880 catatttaatttatttcatgctaaataggtctaaattttagtaaatgaaccttttgtaatgttctaaacttgt 8832952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 8833492 - 8833445
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||||||||| ||||||||||| || || ||||||||||||||||    
T  8833492 aaatttgtttaatt-atgtttaaacttttaagattttgaacaatttttt 8833445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 18798947 - 18798994
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||||||||| ||||||||||| || || ||||||||||||||||    
T  18798947 aaatttgtttaatt-atgtttaaacttttaagattttgaacaatttttt 18798994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 19720855 - 19720895
Alignment:
Q  283 ttcaaaaatttaacagtttgaggataattaaataaatttga 323  Q
    ||||||||||||| ||||| | |||||||||||||||||||    
T  19720855 ttcaaaaatttaatagtttaatgataattaaataaatttga 19720895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 33625702 - 33625666
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  33625702 tcaattcaaatttgttcaatttatgattaaactcttg 33625666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 45958105 - 45958141
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  45958105 tcaattcaaatttgttcaatttatgcttaaactcttg 45958141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 46043663 - 46043699
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  46043663 tcaattcaaatttgttcaatttatgcttaaactcttg 46043699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 106)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 10463737 - 10463834
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  10463737 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaaaaa 10463834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 8313209 - 8313306
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  8313209 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacatacgtgttaagaacattattaaaagttcttatgcaaaaa 8313306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 8336843 - 8336940
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  8336843 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttactgacgtgttaagaacattactaaaagttcctatgcaaaaa 8336940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 10463908 - 10464025
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  10463908 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 10464007  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  10464008 agtttaaggataattaaa 10464025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 27307819 - 27307916
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||||||    
T  27307819 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaaaaacattactgaaagtttctatgcaaaaa 27307916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 203 - 318
Target Start/End: Original strand, 37103209 - 37103324
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||||||| |||||     
T  37103209 taattcgtttcatgttagaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaagagttta 37103308  T
Q  303 aggataattaaataaa 318  Q
    ||||||||||||||||    
T  37103309 aggataattaaataaa 37103324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 1683289 - 1683172
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||        ||||||||||||||||     
T  1683289 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacttttcatagtgttctaaacttgtcttaaagaaatcgttcaaaaatttaag 1683190  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| |||||| |||||    
T  1683189 agtttaaggatagttaaa 1683172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 4426193 - 4426310
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||        ||||||||||||||||     
T  4426193 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaatatttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaag 4426292  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  4426293 agtttaaggataattaaa 4426310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 8337014 - 8337130
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        || |||||||||||||     
T  8337014 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtct-caaaaaatcattcaaaaatttaag 8337112  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  8337113 agtttaaggataattaaa 8337130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 9687798 - 9687715
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  9687798 tcaattcaaatttgtttaatttatgcttaaactcttaagtttttgaacaattttttgcagacgtgttaagaacattactaaaag 9687715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 22023367 - 22023276
Alignment:
Q  22 catcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||||    
T  22023367 catcctcaattcaaatttgtttaatttatgcttaaactcttgaatttttgaacaattttttgtagacgtgttaagaacattactaaaagttc 22023276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 24637063 - 24636945
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct-nnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||||    
T  24637063 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaccttgtctaaaaaaaaatcgttcaaaaatttaa 24636964  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  24636963 gagtttaaggataattaaa 24636945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 2003952 - 2004049
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |  ||||||||||||| ||||||||||||| | ||||||||    
T  2003952 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaactttttgcgtacgtgttaagaacattactaaaagttcatctgcaaaaa 2004049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 8218135 - 8218018
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||        ||||||||||||||||     
T  8218135 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaag 8218036  T
Q  297 agtttgaggataattaaa 314  Q
    | ||| ||||||||||||    
T  8218035 actttaaggataattaaa 8218018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 37103032 - 37103129
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  37103032 tcaattcaaatttgtttaatttatgcataaactcttgaatttttgaataattttttacaaacgtgttaagaacattactaaaagttcctctgcaaaaa 37103129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 38693590 - 38693473
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||        ||||||||||||||||     
T  38693590 catatttaattcgtttcatgttaaaaaattataaattttagtaattgaacctttcatagtattctaaacttgtctcaaaaaaatcgttcaaaaatttaag 38693491  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  38693490 agtttaaggataattaaa 38693473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 30394080 - 30394163
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  30394080 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaag 30394163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 8218293 - 8218207
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  8218293 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 8218207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 27335630 - 27335716
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || | ||||||||||| |||||||||||||    
T  27335630 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttaaacaattttttgcatatgtgttaagaacattactaaaagttc 27335716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 8313380 - 8313496
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| ||        ||||||||||||||||     
T  8313380 catatttaattcgtttcatgttaaaaa-ttctgaattttagtaaatgaacctttcatagtgttctaaacttgcctcaaaaaaatcgttcaaaaatttaag 8313478  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  8313479 agtttaaggataattaaa 8313496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 8404690 - 8404593
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||| ||| | ||||||||    
T  8404690 tcaattcaagtttgtttaatttatgcttaaactcttgaatttttaaacaattttttgcagacgtgttaagaacattactaaaaattcatctgcaaaaa 8404593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 17742497 - 17742614
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||| |||        ||||||||||||||||     
T  17742497 catatttaattcgtttcatgttaaaaaaatctaagttttggtaaatgaacctttcatagtgttctaaacttatcttaaaaaaatcgttcaaaaatttaag 17742596  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  17742597 agtttaaggataattaaa 17742614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 21837110 - 21837227
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |        || |||||||||||||     
T  21837110 catatttaattcgtttcatgttagaaaattctaaattttagtaaatgaaccttttatagtgttctaaacttgtatcgaaaaaatcattcaaaaatttaaa 21837209  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  21837210 agtttaaggataattaaa 21837227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 27307990 - 27308107
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||        ||||||||||||||||     
T  27307990 catatttaatttgtttcatgttaaaaaattctaaattgtggtaaatgaatctttcatagttttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 27308089  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  27308090 agtttaaggataattaaa 27308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 34785544 - 34785448
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||||  ||||||||||||| | ||||||||    
T  34785544 tcaattcaaatttgtttaatttatgcttaaacttttgagtttttgtacaatttttt-cagacgtgttaagaatattactaaaagttcctttgcaaaaa 34785448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 40158436 - 40158552
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||         ||||||||||||||||     
T  40158436 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatag-gttataaacttgtcataaaaaaatcgttcaaaaatttaag 40158534  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  40158535 agtttaaggataattaaa 40158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 2005023 - 2005099
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgtta 103  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  2005023 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgtta 2005099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 4426022 - 4426114
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgc 119  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||| |||| |||||||| ||||||||||||| |||||    
T  4426022 tcaattcaattttgtttaatttatgtttaaacttctgagtttttgaataattttttacatacgtcttaagaacattactaaaagttcctatgc 4426114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 1683458 - 1683363
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||| ||||| |||||| ||| |||||||||| || ||||||||||    
T  1683458 aattcaaatttgtttaatttatgcttaaactcttgagtttttggataattttttgcagacatgttaacaacattactaaaagctcctatgcaaaaa 1683363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 9924412 - 9924486
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9924412 catatttaatttgtttcattttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtct 9924486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 24637234 - 24637148
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  24637234 tcaattcaaatttgattaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 24637148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 26865975 - 26865889
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  26865975 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 26865889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 40158265 - 40158351
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||  || ||||||||||||| |||| ||||||||    
T  40158265 tcaatttaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcatacgtgttaagaacattacaaaaagttc 40158351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 41193272 - 41193174
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||||| ||||||||||| ||| |||||||||| | ||||||||    
T  41193272 tcaattcaaatttgtttaatttatgcttaaacttttgattttttgaacaacttttttacagccgtgttaagaatgttgctaaaagttcctctgcaaaaa 41193174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 621917 - 621824
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||||||||  |||||||||||| ||| ||||||||||||| | ||||||||    
T  621917 ttcaaatttctttaatttatgcttaaacttttgagtttttgaacaatttttggcagacgtgttaaaaacattactaaaagttcctctgcaaaaa 621824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 4462927 - 4463044
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||  |||||||||||||        |||| |||||||||||     
T  4462927 catatttaattcgtttcatgttaacaaattctaaattttagtcaatgaatctttcatagtactctaaacttgtctcgaaaaaatcgtacaaaaatttaag 4463026  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  4463027 agtttaaggataattaaa 4463044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 27335801 - 27335922
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| | |||||||| ||||||||| |||||||| |||| |||||||||||        | ||||||||||||||     
T  27335801 catatttaattcgtttcatgttaaaaaaatataaattttggtaaatgaacctttcataatgttttaaacttgtcttaaaaaaattgttcaaaaatttaag 27335900  T
Q  297 agtttgaggataattaaataaa 318  Q
    ||||| ||||||||||||||||    
T  27335901 agtttaaggataattaaataaa 27335922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 42877905 - 42877809
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||  ||||||||||||||| ||||||||||||| | ||||||||    
T  42877905 tcaattcaaatttgtttaattcatgcttaaactcttgagtttttaaacaa-tttttgtagacgtgttaagaacattactaaaagttcctctgcaaaaa 42877809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 9924280 - 9924355
Alignment:
Q  48 tatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaa 123  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| | |||||||    
T  9924280 tatgtttaaactcttgagtttttgaacaattttttacagacttgttaagaacattacttaaagttcctctgcaaaa 9924355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 8404519 - 8404401
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaat-tctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||||||||||||||||||||  |||||||||| ||||||||| ||||  |||||||||||||||||||        ||||||||||||||||    
T  8404519 catatttaattcgtttcatgttaaaaaaaatctaaattttggtaaatgaaccttttttagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaa 8404420  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  8404419 gagtttaaggataattaaa 8404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 9687655 - 9687585
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  9687655 catatttaattcgtttcatgttaaaaaattctaaattttagtaaacgaaccttttatagtgttctaaactt 9687585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 13920063 - 13920149
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||  ||||||||||||||| ||| |||||||||    
T  13920063 tcaattcaaatttgtttaatttatgcttaaactattaagttttttaacaattttttgtagacgtgttaagaacattaataaaagttc 13920149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 34527188 - 34527306
Alignment:
Q  197 catatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||| |||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||    
T  34527188 catatttaatttgtttcatgttaaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaa 34527287  T
Q  296 cagtttgaggataattaaa 314  Q
     | ||| ||||||||||||    
T  34527288 gaatttaaggataattaaa 34527306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 41139025 - 41139111
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||  |||| |||||||||| |||||||||||||    
T  41139025 tcaattcaaatttgtttaatttatgcttaatctcttaagttttttaacaattttttgtagacatgttaagaacattactaaaagttc 41139111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 43441155 - 43441069
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||||| ||| |||||||||    
T  43441155 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattattaaaagttc 43441069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 621750 - 621633
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||||||||  |||||        |||||| |||||||||     
T  621750 catatttaattcgtttcatgttaaaaaattgtaaattctagtaaatgaaccttttatagtgttctaaatctgtctcataaaaatcgttctaaaatttaag 621651  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  621650 agtttaaggataattaaa 621633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 13920234 - 13920351
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||        ||||||||||||| ||     
T  13920234 catatttaattaatttcatgttaaaaaattctaaattttaataattgaacatttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaattgaag 13920333  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  13920334 agtttaaggataattaaa 13920351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 22023201 - 22023104
Alignment:
Q  217 ttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||        |||||||||||||||| ||||| ||||||||||||    
T  22023201 ttaaaaaattctaaattttagtaaatgaacctttcatggtgttttaaacttgtctcaaaaaaatcgttcaaaaatttaagagtttaaggataattaaa 22023104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 41139196 - 41139321
Alignment:
Q  197 catatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| |||||| ||||||| ||||| |||||||||||||||||| |||| |||||| | ||||||||||||||||        ||||||||||||||||    
T  41139196 catatttaattcatttcatgataaaaaaattctaaattttagtaattgaacctttcacaatgttctaaacttgtctcaaaaaaatcgttcaaaaatttaa 41139295  T
Q  296 cagtttgaggataattaaataaattt 321  Q
     ||||| |||||||||||| ||||||    
T  41139296 aagtttaaggataattaaacaaattt 41139321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 4462756 - 4462828
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||    
T  4462756 tcaattcaaatttgtttcatttatgctttaactcttgagtttttgaacaattatttgcagacgtgttaagaac 4462828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 34785373 - 34785257
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||        ||||| |||||||||| |    
T  34785373 atatttaattcgttttatgttaaaaaaatttaaattttagtaaatgaacctttcatagtgttataaacttgtctaaaaaaaatcgttaaaaaatttaaga 34785274  T
Q  298 gtttgaggataattaaa 314  Q
     ||| ||||||||||||    
T  34785273 atttaaggataattaaa 34785257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 41193093 - 41193026
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||| |||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  41193093 aattcgttttatgttaaaaaattctaaatttttgtaaatgaacctttgatagtgttctaaacttgtct 41193026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 43440990 - 43440927
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  43440990 aattcgtttcatgttaaaaaattataaattttagtaattgaacctttcatagtgttctaaactt 43440927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 16966021 - 16965935
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| |||||||||||||||||||||||| ||||  |||||| |||||| ||||  ||||||||||||||| |||||||||||||    
T  16966021 tcaatttaaatttgtttaatttatgtttaaagtcttacgttttttaacaatattttgtagacgtgttaagaacattactaaaagttc 16965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 37446433 - 37446491
Alignment:
Q  55 aaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37446433 aaactcttaagtttttgaacaattttttacagacatgttaagaacgttactaaaagttc 37446491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 4462245 - 4462157
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt--acagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||  | | ||||||| ||||| |||||||||||||    
T  4462245 tcaattcaaatgtgtttaatttatgcttaaactcttaagtttttgaacaattttttgcatatacgtgtttagaacattactaaaagttc 4462157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 26865830 - 26865713
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| | ||||||||| ||| || | |||||||||||||||||||||||||        || |||||||||||||     
T  26865830 catatttaattcgtttcatgttaaaaaaatttaaattttattaattggacctttcatagtgttctaaacttgtctaaaaaaattcattcaaaaatttaag 26865731  T
Q  297 agtttgaggataattaaa 314  Q
    || || ||||||||||||    
T  26865730 agcttaaggataattaaa 26865713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 2004123 - 2004194
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttg 268  Q
    ||||| |||||||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  2004123 catatttaattcgtttcatgtttaacaattctaaattgtagaaaatgaacctttcatagtgttctaaacttg 2004194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 18261289 - 18261230
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  18261289 tttcatgttaaaaaattctaaattttagtaaatggacctttcatagtgttataaacttgt 18261230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 34527030 - 34527116
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  ||| |||||| |||| || |||||||||||  ||||||||||||||| |||||||| ||||    
T  34527030 tcaattcaaatttgtttaatttattcttatactcttaagttgtttaacaattttttgtagacgtgttaagaacattactaaatgttc 34527116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 4462086 - 4461969
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaac-tttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||| | ||| |||||||  |||||||||||        ||||||||||||||||    
T  4462086 catatttaattcgtttcatgttagaaagttctaaattttagtaaatgaacctttttatagtgtattaaacttgtct-caaaaaatcgttcaaaaatttaa 4461988  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  4461987 gagtttaaggataattaaa 4461969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 18261471 - 18261375
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||| ||| ||||| |||| ||||||  |||| | ||||||| ||||||||||||| ||||||||||||| | ||||||||    
T  18261471 tcaattcaaatttgtttaatt-atgcttaaattcttaagttttcaaacattcttttacaaacgtgttaagaacattactaaaagttcctctgcaaaaa 18261375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 26865232 - 26865301
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||    
T  26865232 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 26865301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 28456679 - 28456796
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||||||||   ||||||||||| ||||||  ||||||||| ||||||||||||||        |||| |||||||||||     
T  28456679 catatttaattagtttcatgttaaaaaaaagtaaattttagttaatgaacttttcatagtattctaaacttgtctcacaaaaatcgtacaaaaatttaag 28456778  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  28456779 agtttaaggataattaaa 28456796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 34010093 - 34010210
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| |||| ||| ||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||        | || |||||||||||     
T  34010093 catatttaatttgttttatggtaaaaaattctaaattttagttaatgaacctttcttagtattctaaacttgtctcaaaaaaatagtacaaaaatttaag 34010192  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  34010193 agtttaaggataattaaa 34010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 6365508 - 6365413
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaa 123  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||| ||||||  |||| | ||||||||| ||| ||||||||| | |||||||    
T  6365508 tcaattcaaatttgtttaatttatgcttaaactattaagtttttgaac-atttttcgcagatgcgttaagaacattagtaaaagttcctctgcaaaa 6365413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 31211366 - 31211477
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct-nnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||||| |||||||| |||||||||| |||||| || |||||||| |||||||||||||| |         |||||||||||||||| |||||     
T  31211366 aattcgtttcatattaaaaaaatctaaatttttgtaaataaacctttcatattgttctaaacttgtttaaaaaaaaatcgttcaaaaatttaagagttta 31211465  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  31211466 aggataattaaa 31211477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 42852901 - 42852964
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||||||||| ||| ||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  42852901 aattcgtttcacgttgaaaaattttaaattttagtaaatgaatctttcatattgttctaaactt 42852964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 8217510 - 8217575
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||  ||||||||    
T  8217510 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttcttgtagacgtgt 8217575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 17742333 - 17742411
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||        ||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||||    
T  17742333 tcaattcaaatttgtttaattta--------ctcttgagtttttaaacgattttttgcagacgtgttaagaacattactaaaagttc 17742411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 22166985 - 22166924
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    |||| |||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||    
T  22166985 tttcttgttaaaaaattctaaattttactaaatgaacctttcgtagtgttctaaatttgtct 22166924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 22167161 - 22167085
Alignment:
Q  36 atttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||| ||||||||||||||  | ||||||||||||||||  |||||| |||||||| |||||||||||||    
T  22167161 atttgtttaatt-atgtttaaactcttatgcttttgaacaattttttgtagacgtattaagaacattactaaaagttc 22167085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 27280328 - 27280401
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    |||| |||||| |||||||| |||||||||  |||||||||||||||| |||| ||| ||||||||||||||||    
T  27280328 atatttaattcatttcatgtcaaaaaattccgaattttagtaaatgaacctttaataatgttctaaacttgtct 27280401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 28456585 - 28456626
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagttt 68  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28456585 tcaattcaaatttgtttaatttatgtttaaactcttgagttt 28456626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 42852775 - 42852824
Alignment:
Q  66 tttttgaacaattttttacagacgtgttaagaacgttactaaaagttctt 115  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  42852775 tttttgaacaattttttgcatacgtgttaagaacgttactaaaagttctt 42852824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 2005195 - 2005267
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| ||||||||||||| ||| |||||    
T  2005195 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttataatcttgt 2005267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 10674812 - 10674927
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||| ||||||| |||||||||||||||||||| ||| ||||  | |||||||||||||||||        ||||| ||| ||||||     
T  10674812 catatttaattcattttatgttaataaattctaaattttagtaaacgaaccttttgtggtgttctaaacttgtctcaaaaaaatcgtttaaagatttaaa 10674911  T
Q  297 agtttgaggataatta 312  Q
    ||||| ||||||||||    
T  10674912 agtttaaggataatta 10674927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 18950959 - 18950876
Alignment:
Q  231 attttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    |||||||||| |||| |||||||||||||||||||||||||        ||||||| |||||||| ||||| ||||||||||||    
T  18950959 attttagtaattgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcagaaatttaagagtttaaggataattaaa 18950876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 10674648 - 10674737
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||| ||||| ||| ||||||| || || ||||||||||||||||||| | ||||||| ||| ||||||||||||| ||| ||||||    
T  10674648 aaatttgtataatt-atgcttaaacttttaagattttgaacaattttttacaaaagtgttaaaaacattactaaaagttcatatacaaaaa 10674737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 43210914 - 43210825
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||| || || ||||||||||||||||  | | ||||||||||| |||  |||||||||||||||||||    
T  43210914 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgtacaagtgttaagaacattaagaaaagttcttatgcaaaaa 43210825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 36876038 - 36876099
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||||||||||| ||||||||||||| || |||| ||| ||||| ||||||||||    
T  36876038 tttcatgttaaaaaattctgaattttagtaaataaacctttaataatgttccaaacttgtct 36876099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 42877736 - 42877619
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||| ||||||||   |||||||| ||||||||| ||||||| |  ||||||||||||||        || |||||||||||||     
T  42877736 catatttaattcgtttcatcttaaaaaaaattaaattttggtaaatgaacctttcatggcattctaaacttgtcttaaaaatatccttcaaaaatttaag 42877637  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  42877636 agtttaagaataattaaa 42877619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 3548470 - 3548347
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||  ||||| |||| |||||||||||||||||| |||||||| ||||||||| ||||||        |||||||||  |||||     
T  3548470 catatttaattcatttcacattaaataatt-taaattttagtaaatgaacctttcataatgttctaaatttgtctaaaataaatcgttcaaatgtttaag 3548372  T
Q  297 agtttgaggataattaaataaattt 321  Q
     |||| |||||||||||| ||||||    
T  3548371 tgtttaaggataattaaacaaattt 3548347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 14049878 - 14049762
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||| ||| ||||||||||||| ||||| ||||||||||||  |||| || |||||||||| ||| |        |||||||||||||||| |    
T  14049878 atatttaattcatttgatgttaaaaaattttaaatattagtaaatgaacttttcgtaatgttctaaacgtgtattaagaaaatcgttcaaaaatttaaga 14049779  T
Q  298 gtttgaggataattaaa 314  Q
    |||| ||||| ||||||    
T  14049778 gtttaaggatgattaaa 14049762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 36875874 - 36875942
Alignment:
Q  46 tttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| |||||||||| ||||||||||||| |||||| |||| |||||||||||  ||||||||||||    
T  36875874 tttatggttaaactcttaagtttttgaacaatttttttgcagatgtgttaagaacactactaaaagttc 36875942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 40272459 - 40272542
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||| |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| ||||||||    
T  40272459 aatttaaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttc 40272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 43210750 - 43210678
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| |||||||||||||| ||| ||||  || ||||||||||||||    
T  43210750 catatttaatttatttcatgttaaaaaattttaaattttagtaaacgaaccttttgtaatgttctaaacttgt 43210678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 2262904 - 2262845
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    |||||| ||||||||||||||||||||||||| |||  ||| ||| ||||||||||||||    
T  2262904 tttcatattaaaaaattctaaattttagtaaacgaagtttttataatgttctaaacttgt 2262845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 31211187 - 31211274
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttac-agacgtgttaagaacgttactaaaagttc 113  Q
    |||||| |||||||||||||||||  ||||| |||| |||||||||||||||||||   |||   ||||||||| |||||||||||||    
T  31211187 tcaatttaaatttgtttaatttatacttaaattcttaagtttttgaacaatttttttgtagattagttaagaacattactaaaagttc 31211274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 38693731 - 38693676
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||| |||||||||||||||  |||||||||| ||||||| |||||||||||    
T  38693731 tcaattcatatttgtttaatttatacttaaactcttaagttttttaacaatttttt 38693676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 2263081 - 2262992
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||| || |  |||||||||||||||| || | ||||||||||| |||| |||||||| | ||||||||    
T  2263081 aaatttgtttaatt-atgcttaaacttttaaaattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgcaaaaa 2262992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 30734048 - 30733974
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||| | ||||||||||||||||||  ||||||||||||||  ||| ||| |||||||||| |||||    
T  30734048 catatttaattcttgtcatgttaaaaaattctattttttagtaaatgaacattttataatgttctaaacatgtct 30733974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 43209900 - 43209989
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||| ||||||||| ||| || |||| || || |||||||||||||||| || | || |||||||| |||| |||||||||||||||||||    
T  43209900 aaatctgtttaatt-atgcttgaacttttaagattttgaacaattttttgcacaagtattaagaacattaccaaaagttcttatgcaaaaa 43209989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 30394252 - 30394323
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| || ||||||| ||||| ||| ||||||||||| |||||||||    
T  30394252 catatttaatttatttcatgttaaaaaattatagattttagcaaatg-aaccttcatagtgttataaacttgt 30394323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 32537687 - 32537608
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgtt-aagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| ||||||| ||||| ||||||||||| |||| || | ||||| |||||| |||||||||||||    
T  32537687 aaatttgtttaatt-atgcttaaacttttgagattttgaacaatgttttgcaaaagtgttaaagaacattactaaaagttc 32537608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 37446329 - 37446373
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttg 71  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||    
T  37446329 tcaattcaaatatgtttaatttatgttttaactcttaagtttttg 37446373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 9168662 - 9168631
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaa 241  Q
    ||||||||||||||||||||||||||||||||    
T  9168662 tttcatgttaaaaaattctaaattttagtaaa 9168631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 28381186 - 28381221
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactctt 62  Q
    |||||||||||||||||||| |||||||||||||||    
T  28381186 tcaattcaaatttgtttaatctatgtttaaactctt 28381221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 37812678 - 37812752
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| ||||    
T  37812678 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaa 37812752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 43538588 - 43538623
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactctt 62  Q
    ||||||||||||||||||||||||||| ||||||||    
T  43538588 tcaattcaaatttgtttaatttatgttaaaactctt 43538623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 14050001 - 14049943
Alignment:
Q  54 taaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||| ||||||||||||||||||   | || |||||||||| ||||||||||||    
T  14050001 taaactcttaagtttttgaacaatttttggaacacatgttaagaacattactaaaagtt 14049943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 6365408 - 6365347
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    |||||||||| |||||| ||  || |||||||||||  ||||||||| ||||||||||||||    
T  6365408 tttcatgttataaaattataggttctagtaaatgaacatttcatagttttctaaacttgtct 6365347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 34527398 - 34527365
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactc 60  Q
    |||||| |||||||||||||||||||||||||||    
T  34527398 tcaatttaaatttgtttaatttatgtttaaactc 34527365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 19332632 - 19332704
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| |||| |||||||| |||||||||| ||| ||||  || ||||||||||||||    
T  19332632 catatttaatttatttcatgctaaataattctaacttttagtaaacgaaccttttgtaatgttctaaacttgt 19332704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 37446572 - 37446644
Alignment:
Q  198 atatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    |||| ||||||||||||  |||||| |||||||||||||||||| |||| | || |||  |||||||||||||    
T  37446572 atatttaattcgtttcacattaaaaaaattctaaattttagtaagtgaaccatttatatggttctaaacttgt 37446644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 43440248 - 43440280
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaact 59  Q
    |||||||||||||||| ||||||||||||||||    
T  43440248 tcaattcaaatttgttcaatttatgtttaaact 43440280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 15721360 - 15721263
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  15721360 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaaaaactttactaaaagttcctatgcaaaaa 15721263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 10915474 - 10915591
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||| ||||||||||||     
T  10915474 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgatcaaaaatttaag 10915573  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  10915574 agtttaaggataattaaa 10915591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 844278 - 844395
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  844278 catatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 844377  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  844378 agtttaagaataattaaa 844395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 938845 - 938930
Alignment:
Q  28 caattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||    
T  938845 caattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcaaacgtgttaagaacattactaaaagttc 938930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 26356702 - 26356819
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  26356702 catatttaattcatttcatgttaaaaaattttaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 26356801  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  26356802 agtttaaggataattaaa 26356819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 30660950 - 30661067
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  30660950 catatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 30661049  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  30661050 agtttaagtataattaaa 30661067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 5974604 - 5974518
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  5974604 tcaatttaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttc 5974518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 26356528 - 26356628
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa---ttttttacagacgtgttaagaacgttactaaaagttcttatgcaaaa 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||  |||||||||||| ||||||||||||  |||||||||    
T  26356528 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttttttacacgcgtgttaagaacattactaaaagtttctatgcaaaa 26356627  T
Q  124 a 124  Q
    |    
T  26356628 a 26356628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 2087438 - 2087534
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||| | ||||||||    
T  2087438 tcaattcaaatttgtttaatttatgcttaaactctt-agtttttgaacaaatttttacagacatgttaagaacattactaaaagttcatctgcaaaaa 2087534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 5087485 - 5087388
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||||| | ||||||||    
T  5087485 tcaattcaaatatgtttaatttatgcttaaactcttgactttttgaacaattttttgtagacgtgttaagaacattactaaaagttcctctgcaaaaa 5087388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 8710006 - 8710123
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||        |||| |||||||||||     
T  8710006 catatttaattcgtttcatgttaaaaaattctaaattttagttaatgaacctttcatagtattctaaacttgtcttaaaaaaatcgtacaaaaatttaag 8710105  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  8710106 agtttaaggataattaaa 8710123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 17245751 - 17245868
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| || ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  17245751 catatttatttcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 17245850  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  17245851 agtttaaggataattaaa 17245868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 30660778 - 30660875
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||| | ||||||||    
T  30660778 tcaatttaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacatgttaagaatattactaaaagttcatctgcaaaaa 30660875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 30492881 - 30492997
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||        |||||||||||||||| |    
T  30492881 atatttaactcgtttcatgttaaaaaattataaattttagtaaatgaacccttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaaga 30492980  T
Q  298 gtttgaggataattaaa 314  Q
    |||| ||||||||||||    
T  30492981 gtttaaggataattaaa 30492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 5079802 - 5079716
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  5079802 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 5079716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 10915301 - 10915386
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa--ttttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||    
T  10915301 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttttgcagacgtgttaagaacattactaaaag 10915386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 33518648 - 33518554
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| | ||||||||    
T  33518648 attcaaatttgtttaatgtatgcttatactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttcatctgcaaaaa 33518554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 5087314 - 5087197
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||         |||||||||| ||||     
T  5087314 catatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttctaaacttgtctaaaaacaaccgttcaaaaagttaag 5087215  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  5087214 agtttaaggataattaaa 5087197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 5974433 - 5974316
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||        |||| |||||||||||     
T  5974433 catatttaattcgtttcatgttaaaaaattttaaattttagttaatgaacctttcatagtattctaaacttgtctgaaaaaaatcgtacaaaaatttaag 5974334  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  5974333 agtttaaggataattaaa 5974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 17697510 - 17697393
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||        |||||||||| |||||     
T  17697510 catatttaattcgtttcatcttaataaattctaaattttagtaaatgaacctttcatagtgttctaaacttttctaaaaaaaatcgttcaaaagtttaag 17697411  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  17697410 agtttaaggataattaaa 17697393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 33744958 - 33744875
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  33744958 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaatgttttacagacgtgttaagaacgttattaaaag 33744875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 1820983 - 1821078
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||| || |||| |||||||| ||||||||||||| | ||||||||    
T  1820983 tcaattcaaatttgttt--tttatgcttaaactcttgagtttttgaacaattttttgcatacgtattaagaacattactaaaagttcctctgcaaaaa 1821078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 8709836 - 8709921
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||    
T  8709836 tcaatttaaatttgtttaatttatgcttaaactcttgag-ttttgaacaattttttgcagacgtgttaagaatattactaaaagttc 8709921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 12481948 - 12482050
Alignment:
Q  219 aaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaataaa 318  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||        |||||||||||||||| ||||| |||||||||||| |||    
T  12481948 aaaaaattctaaattttagcaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaagagtttaaggataattaaacaaa 12482047  T
Q  319 ttt 321  Q
    |||    
T  12482048 ttt 12482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 861482 - 861365
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||        ||||||||||||||||     
T  861482 catatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttcaaaacttttctcaaaaaaatcgttcaaaaatttaag 861383  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| |  |||||||||    
T  861382 agtttaaaaataattaaa 861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 15721189 - 15721069
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtct--nnnnnnnntcgttcaaaaattt 293  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||          ||||||||||||||    
T  15721189 catatttaattcgtttcatgttaaaaaaattctaaaatttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaaaatcgttcaaaaattt 15721090  T
Q  294 aacagtttgaggataattaaa 314  Q
    || ||||| ||||||||||||    
T  15721089 aagagtttaaggataattaaa 15721069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 29692035 - 29691918
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| |||  ||||||        ||||||||||||||||     
T  29692035 catatttaattcttttcatgttaataaattctaaattttagtaaatgaacctttcatagtgttttaagtttgtctcaaaaaaatcgttcaaaaatttaag 29691936  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  29691935 agtttaaggataattaaa 29691918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 17697676 - 17697598
Alignment:
Q  32 tcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| |||| |||||    
T  17697676 tcaaatttgtttaatttatgcttaaactcgtgagtttttgaacaattttttgaagacgtgttaagaacattacaaaaag 17697598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 18503274 - 18503188
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||| ||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  18503274 tcaattcaaatttctttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 18503188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 20510650 - 20510724
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  20510650 catatttaattcgattcatgttaaaaaattctaaattttagttaatgaacctttcatagtgttctaaatttgtct 20510724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 34046557 - 34046675
Alignment:
Q  197 catatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||| |||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||    
T  34046557 catatttaatttgtttcatgttaaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaa 34046656  T
Q  296 cagtttgaggataattaaa 314  Q
     | ||| ||||||||||||    
T  34046657 gaatttaaggataattaaa 34046675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 844106 - 844203
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||| ||||| | || ||||| ||||||||||||| | ||||||||    
T  844106 tcaattcaaacttgcttaatttatgtttaaactcttaagtttttgaacaactttttgcagacatatttagaacattactaaaagttcctctgcaaaaa 844203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 939015 - 939132
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||||||| | |||||||||||||||||| |||||| |||||||||||| |||||        |||||| ||||||||      
T  939015 catatttaattcatttcatgttaaaaaaatttaaattttagtaaatgaacctttcaaagtgttctaaacatgtctcaaaaaaatcgttcgaaaatttagg 939114  T
Q  297 agtttgaggataattaaa 314  Q
    ||||||||||||||||||    
T  939115 agtttgaggataattaaa 939132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 1821150 - 1821267
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||| || ||| |||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||        ||||||||||||||||     
T  1821150 catatttaactcatttaatgttaaaaaattctaaattttagtaaatgaacctttcataatgttataaacttgtctcaaaaaaatcgttcaaaaatttaag 1821249  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| | ||||||||||    
T  1821250 agtttaaagataattaaa 1821267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 18503116 - 18502999
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||| ||||||||| | ||||||||| ||| |||| |||||||||||||||||||||||||        || |||||||||||||     
T  18503116 catatgtaattcgtttcaggttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcattcaaaaatttaag 18503017  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  18503016 agtttaaggataattaaa 18502999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 22732293 - 22732197
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||||| |||||||| |||| |||||||| ||||||||||||| | ||||||||    
T  22732293 tcaattcaaatttgtttaaactatgcttaaactcttgagtttttaaacaa-tttttacatacgtattaagaacattactaaaagttcctctgcaaaaa 22732197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 29692205 - 29692109
Alignment:
Q  28 caattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||  |  |||| |||||||| | ||||||||    
T  29692205 caattcaaatttgtttaatttatgcttaaactcttgagtttttcaacaattttttgtagacgtgttaaacatattacaaaaagttcctctgcaaaaa 29692109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 33744786 - 33744670
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |        ||||| ||||||||||     
T  33744786 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaaaaatcgttaaaaaatttaag 33744687  T
Q  297 agtttgaggataattaa 313  Q
    ||||| |||||||||||    
T  33744686 agtttaaggataattaa 33744670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 20898275 - 20898193
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    ||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||  |||| | |||||||| |||||||||    
T  20898275 tcaattcaaatttttttaatttatgcttaaactcttaagtttttgaacaatttttttaagacttcttaagaacattactaaaa 20898193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 20897931 - 20897818
Alignment:
Q  203 taattcgtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtct-nnnnnnnntcgttcaaaaatttaacagtt 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||  |||||||||||         |||||||||||||||| ||||    
T  20897931 taattcgtttcatgttaaaaaaattctaaattttagtaaatgaacctttcatagcgtcttaaacttgtctaaaaaataatcgttcaaaaatttaagagtt 20897832  T
Q  301 tgaggataattaaa 314  Q
    | ||||||||||||    
T  20897831 taaggataattaaa 20897818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 17244540 - 17244624
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagt 111  Q
    ||||||||||| ||||||||||||  |||||||||| ||||||| |||||||||||  ||| ||||||||||| |||||||||||    
T  17244540 tcaattcaaatatgtttaatttattcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattactaaaagt 17244624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 861655 - 861568
Alignment:
Q  27 tcaattcaaatttgtttaatttatg-tttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||| ||||| | || ||||| |||||||||||||    
T  861655 tcaattcaaatatgcttaatttatgctttaaactcttaagtttttgaacaattttttgcagacatatttagaacattactaaaagttc 861568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 20977540 - 20977651
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||| ||||||||||||   || ||||| |||||||||||| |||||||||||||||||||||||||        |||||||||||||||| |||||     
T  20977540 taattcttttcatgttaaatttttttaaatattagtaaatgaacctttcatagtgttctaaacttgtctaaaaaatatcgttcaaaaatttaagagttta 20977639  T
Q  303 aggataattaaa 314  Q
    |||||| |||||    
T  20977640 aggatagttaaa 20977651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 30353251 - 30353129
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaat--tctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaattta 294  Q
    ||||| ||||||||||||||||||||||   ||||||||||||||| |||| |||||||| ||||||||||||||||        |||||||||||||||    
T  30353251 catatttaattcgtttcatgttaaaaaaaactctaaattttagtaagtgaacctttcataatgttctaaacttgtct-aaaaaaatcgttcaaaaattta 30353153  T
Q  295 acagtttgaggataattaaataaa 318  Q
    |  |||| | ||||||||||||||    
T  30353152 agtgtttaaagataattaaataaa 30353129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 5079631 - 5079557
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||| ||||||||||||||||   ||||||||||||| |||| |||||||||||||||||||||||||    
T  5079631 catatttaatttgtttcatgttaaaaaaaattaaattttagtaattgaacctttcatagtgttctaaacttgtct 5079557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 14256274 - 14256212
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgtt 259  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  14256274 catatttaattcttttcatgttaataaattctaaattttagtaaatgaacctttcatagtgtt 14256212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 14256440 - 14256342
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagt-ttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||||   |||| |||||| ||| ||||||||||||| | ||||||||    
T  14256440 tcaattcaaatttatttaatttatgcttaaactcttgagtttttttaacaatttttggtagacatgttaaaaacattactaaaagttcctctgcaaaaa 14256342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 28476314 - 28476253
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgtt 259  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  28476314 atatttaattcttttcatgttaataaattctaaattttagtaaatgaacctttcatagtgtt 28476253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 11400364 - 11400281
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagt-ttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| ||   ||||||||| ||||| ||||||| |||||||||    
T  11400364 tcaattcaaatttgtttaatttatgattaaactcttgagttttttaaatggttttttacatacgtgctaagaacattactaaaa 11400281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 17246376 - 17246321
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  17246376 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttttt 17246321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 28476486 - 28476431
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  28476486 tcaatttaaatttgtttaatttatgtttaaacttttgagtttttcaacaatttttt 28476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 3914546 - 3914474
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    |||||||||||  |||||||||||||||||||||||||||||||| |||  |||  || ||||||||||||||    
T  3914546 catatctaatttatttcatgttaaaaaattctaaattttagtaaacgaactttttgtaatgttctaaacttgt 3914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 33518458 - 33518407
Alignment:
Q  220 aaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  33518458 aaaaattctaaattttagttaataaacctttcatagtgttctaaacttgtct 33518407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 20977199 - 20977285
Alignment:
Q  228 taaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||        |||||||||||||||| ||||| |||||| |||||    
T  20977199 taaatattagaaaatgaacctttcatagtgttctaaacttgtcttaaaacaatcgttcaaaaatttaagagtttaaggatagttaaa 20977285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 2087608 - 2087661
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaacttt 250  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||||| ||||    
T  2087608 catatttaattcggctcatgttaaaaaattctaaattttagtaaatgaaccttt 2087661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 11400191 - 11400122
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    |||| ||||| ||||||||||| |||||| | ||||||||||||||||  ||| ||||||||||||||||    
T  11400191 atatttaattagtttcatgttagaaaattgttaattttagtaaatgaatgttttatagtgttctaaactt 11400122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 20510491 - 20510535
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttg 71  Q
    |||||||||||||||||| |||||| |||||||||||||||||||    
T  20510491 tcaattcaaatttgtttattttatgcttaaactcttgagtttttg 20510535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 22732123 - 22732048
Alignment:
Q  197 catatctaattcgtttcatgttaa-aaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||| |||| |||||||||| |||||||||  | | | ||||||||||||||||||    
T  22732123 catatttaattcgtttcatgttaaaaaaaatctaaattttggtaaatgaacatattacagtgttctaaacttgtct 22732048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 30492722 - 30492765
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagttttt 70  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  30492722 tcaattcaaatctgtttaatttatgcttaaactcttgagttttt 30492765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 5079000 - 5079053
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||||||| |||||||||| |  |||| |||||||||||    
T  5079000 aattcaaatttgtttaatttatgcttaaactctttaagtttttaacaatttttt 5079053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 24959008 - 24958932
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa--ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||| ||||| |||||||||  |||||||||||||||||| || ||||| |||||||  ||||||||||    
T  24959008 catatttaattcatttcaggttaaaaaaaattctaaattttagtaaataaatctttcgtagtgttacaaacttgtct 24958932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 21108355 - 21108281
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| ||||    
T  21108355 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaa 21108281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 289005 - 289094
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||  || || |||||||||||||||| || | ||||||||||| |||| |||| ||| | ||||||||    
T  289005 aaatttgtttaatt-atgcttaaacatttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaacttcatctgcaaaaa 289094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 289647 - 289583
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | |||||||||||    
T  289647 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaac 289583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 21108191 - 21108119
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| |||| |||| |||||||||||||| ||| ||||  || ||||||||||||||    
T  21108191 catatttaatttatttcatgctaaataattataaattttagtaaacgaaccttttgtaatgttctaaacttgt 21108119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 22972083 - 22972047
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  22972083 tcaattcaaatttgttcaatttatgcttaaactcttg 22972047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 23816315 - 23816351
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  23816315 tcaattcaaatttgttcaatttatgcttaaactcttg 23816351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 30492767 - 30492815
Alignment:
Q  84 cagacgtgttaagaacgttactaaaagttcttatgc-aaaaattgtcgc 131  Q
    |||||||||||||||| ||||||||||||| | ||| ||||||||||||    
T  30492767 cagacgtgttaagaacattactaaaagttcctctgctaaaaattgtcgc 30492815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 30331573 - 30331476
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  30331573 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcgtgttaagaacattactaaaagttcctatgcaaaaa 30331476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 19522712 - 19522809
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||    
T  19522712 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaaagtcctatgcaaaaa 19522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 33177716 - 33177619
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||    
T  33177716 tcaatttaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagctcctatgcaaaaa 33177619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 38114507 - 38114410
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  38114507 tcaattcaaatttgtttaatttatgtttaaactcttgagttttttaacaaatttttacagacgtgttaagaacattactaaaagttcctatgcaaaaa 38114410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 3873468 - 3873374
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||    
T  3873468 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcatgttaagaacattactaaaagttcctatgcaa 3873374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 53323774 - 53323872
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  53323774 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttttacatacgtgttaagaacattactaaaagttcctatgcaaaaa 53323872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 19522883 - 19523012
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  19522883 catatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaag 19522982  T
Q  297 agtttgaggataattaaataaatttgaatt 326  Q
    ||||| || ||||||||| |||||||||||    
T  19522983 agtttaagaataattaaacaaatttgaatt 19523012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 47309434 - 47309531
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||| ||||||||||    
T  47309434 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattatttacagacatgttaagaacattaataaaagttcctatgcaaaaa 47309531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 51876007 - 51876104
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||    
T  51876007 tcaatttaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttagagacgtgttaagaacattactaaaagttcctctgcaaaaa 51876104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 53323946 - 53324063
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  53323946 catatttaattcatttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 53324045  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  53324046 agtttaaggataattaaa 53324063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 3873276 - 3873152
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||| |||     
T  3873276 catatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatgtaag 3873177  T
Q  297 agtttgaggataattaaataaattt 321  Q
    ||||| |||||||||||| ||||||    
T  3873176 agtttaaggataattaaacaaattt 3873152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 43937996 - 43938098
Alignment:
Q  22 catcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaa 121  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||| ||||||||||||| | |||||    
T  43937996 catcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgtagacatgttaagaacattactaaaagttcctctgcaa 43938095  T
Q  122 aaa 124  Q
    |||    
T  43938096 aaa 43938098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 22068097 - 22068194
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| | |||||||||||||||| ||||||||||||| | ||||||||    
T  22068097 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaatagttttctgcagacgtgttaagaacattactaaaagttcctctgcaaaaa 22068194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 33177545 - 33177428
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||        ||||||||||||||||     
T  33177545 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacttttcatagtattctaaacttgtctcaaaaaaatcgttcaaaaatttaag 33177446  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  33177445 agtttaaggataattaaa 33177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 47309605 - 47309722
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||        ||||| ||||||||||     
T  47309605 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcacagtgttctaaacttgtctcaaaaaaatcgtttaaaaatttaag 47309704  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  47309705 agtttaaggataattaaa 47309722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 7617611 - 7617539
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7617611 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacatgttaagaac 7617539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 7617536 - 7617425
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||        |||||||||||||||| |||||     
T  7617536 taattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcataatgttttaaacttgtcttaaaaaaatcgttcaaaaatttaagagttta 7617437  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  7617436 aggataattaaa 7617425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 28448677 - 28448583
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||| ||||||||||    
T  28448677 aattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgca-acgtgttgagaacattactaaaagttcctatgcaaaaa 28448583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 30331402 - 30331285
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |        ||||||||||||||||     
T  30331402 catatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtttcaaaaaaatcgttcaaaaatttaag 30331303  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  30331302 agtttaagaataattaaa 30331285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 44209777 - 44209680
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || ||||||||  ||||||||||||||| ||||||||||||| || |||||||    
T  44209777 tcaattcaaatttgtttaatttatgtttaaactcttaagttttttaataattttttgtagacgtgttaagaacattactaaaagttcgtacgcaaaaa 44209680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 53571665 - 53571549
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||        |||||||||||||||| |    
T  53571665 atatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 53571566  T
Q  298 gtttgaggataattaaa 314  Q
    |||| ||||| ||||||    
T  53571565 gtttaaggatgattaaa 53571549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 44289677 - 44289760
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  44289677 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaag 44289760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 48082443 - 48082526
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  48082443 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaag 48082526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 204 - 314
Target Start/End: Complemental strand, 28448508 - 28448398
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttga 303  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||        || ||||||||||||| ||||| |    
T  28448508 aatttgtttcatgttaaaaaattgtaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcattcaaaaatttaagagtttaa 28448409  T
Q  304 ggataattaaa 314  Q
    |||||||||||    
T  28448408 ggataattaaa 28448398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 37329487 - 37329573
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  37329487 tcaattcaaatttgtttaatttatgtttaaactcttaaattttttaacaattttttgtagacgtgttaagaacattactaaaagttc 37329573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 43938173 - 43938291
Alignment:
Q  197 catatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||        ||||||||||||||||    
T  43938173 catatttaattcgtttcatgttaaaaaaattctaaattttagtaaatgaacctttcatagtgttctaagcttgtctcaaaaaaatcgttcaaaaatttaa 43938272  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||  ||||||||||||    
T  43938273 gagttaaaggataattaaa 43938291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 11670277 - 11670394
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||||        |||||||||| |||||     
T  11670277 catatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcgtagtgttctaaacttgtctcaaaaaattcgttcaaaattttaag 11670376  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  11670377 agtttaaggataattaaa 11670394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 22068268 - 22068385
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| | |||        ||||||||||||||||     
T  22068268 catatttaattcgtttcatgttaaaaaaatctaaattttagaaaatgaacctttcatagtgttctaaacatatctcaaaaaaatcgttcaaaaatttaag 22068367  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  22068368 agtttaaggataattaaa 22068385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 25422237 - 25422354
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||        ||||| ||||||||||     
T  25422237 catatttaattcgttttatgttaaaaaattctaaattttagtaattgaacctttgatagtgttctaaacttgtctcaaaaaaatcgtttaaaaatttaag 25422336  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  25422337 agtttaaggataattaaa 25422354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 44209619 - 44209502
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  44209619 catatttaattcttttcgtgttaaaagattctaaattttagtaattgaatctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 44209520  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  44209519 agtttaaggataattaaa 44209502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 55938075 - 55938152
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagt 111  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  55938075 aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaatattactaaaagt 55938152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 20178175 - 20178084
Alignment:
Q  22 catcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||| ||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||| || |||||||||| |||||||||||||    
T  20178175 catcctcaattcaaatttgtttaatttatgcttaaattcttgggttattgaacaattttttacatacatgttaagaacattactaaaagttc 20178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 25422067 - 25422150
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||  ||||||||||||||| ||||||||||    
T  25422067 tcaattcaaatttgtttaatttatgtttaaactcttaagttttttaacatttttttgtagacgtgttaagaacattactaaaag 25422150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 4850094 - 4850176
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||| ||||||||||    
T  4850094 tcaattcaaatatgtttaatttatgcttaaactcttaagtttttgaacaattttttgcatacgtgttaagaatgttactaaaa 4850176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 31316547 - 31316637
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||| | ||||||||    
T  31316547 aaatttgtttaatttatgcttaaactcttgagttttttaacaattttttgtagacgtgttaaaaacattactaaaagttcctctgcaaaaa 31316637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 31316711 - 31316829
Alignment:
Q  197 catatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||        ||||||| ||||||||    
T  31316711 catatttaatttgtttcatgttaaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcagaaatttaa 31316810  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  31316811 gagtttaaggataattaaa 31316829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 33689417 - 33689343
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  33689417 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgctctaaacttgtct 33689343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 1870277 - 1870393
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||        ||||||||||||||||     
T  1870277 catatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacattttatagtgttctaaacttgtct-taaaaaatcgttcaaaaatttaat 1870375  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| |||||| |||||    
T  1870376 agtttaaggatagttaaa 1870393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 3862606 - 3862488
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct-nnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||         ||||| |||||||||| |||||     
T  3862606 aattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatcgcattctaaacttgtctcaaaaaaaatcgttaaaaaatttaagagttta 3862507  T
Q  303 aggataattaaataaattt 321  Q
    |||||||||||| ||||||    
T  3862506 aggataattaaacaaattt 3862488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 3871363 - 3871245
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct-nnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||         ||||| |||||||||| |||||     
T  3871363 aattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatcgcattctaaacttgtctcaaaaaaaatcgttaaaaaatttaagagttta 3871264  T
Q  303 aggataattaaataaattt 321  Q
    |||||||||||| ||||||    
T  3871263 aggataattaaacaaattt 3871245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 13718271 - 13718173
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatt-ttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||| |||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||| |||||||||  ||||||||||||| | ||||||||    
T  13718271 tcaatttaaatttgtttaatttatgcttaaactcttgagttttttaacaatttttttccagacatgttaagaatattactaaaagttcctctgcaaaaa 13718173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 33689588 - 33689506
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||||| |||||||||    
T  33689588 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattactaaaa 33689506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 51395907 - 51395821
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| || ||||||||||||  || |||||||||||||    
T  51395907 tcaattcaaatttgtttaatttatgcttaaactcatgagtttttgaataatttcttgcagacgtgttaaacacattactaaaagttc 51395821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 53423859 - 53423774
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  | ||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||    
T  53423859 tcaattcaaatttgtttaatttatact-aaactcttgagtttttggacaattttttgcagacatgttaagaacattactaaaagttc 53423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 53571824 - 53571738
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| ||| |||||||||    
T  53571824 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattattaaaagttc 53571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 35821128 - 35821220
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||  |||||||||| | |||| |||||||||||| |||||||||||||||| ||||||||||||| | ||||||||    
T  35821128 ttcaaatttgtttaatttatacttaaactcttaaatttt-gaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaa 35821220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 10321695 - 10321779
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagt 111  Q
    |||||| |||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||    
T  10321695 tcaattaaaatttgtttaatttatacttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagt 10321779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 44289849 - 44289965
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |        ||||| ||||||||||     
T  44289849 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaag 44289948  T
Q  297 agtttgaggataattaa 313  Q
    ||||| |||||||||||    
T  44289949 agtttaaggataattaa 44289965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 10085485 - 10085571
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| | |||||||| ||||| |||| |||||||| ||||| |||| ||||| |||||||||||||    
T  10085485 tcaattcaaatttgtttaatttatgctaaaactcttaagtttgtgaataattttttgcagacatgtttagaacattactaaaagttc 10085571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 35060950 - 35060876
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||| |||| |||||||||||||    
T  35060950 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaatatttcaaagtgctctaaacttgtct 35060876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 47379300 - 47379226
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||| |||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  47379300 catatttaattcatttcatttttaaaaattctaaattttagtaaatgaacctttcatagtattctaaacttgtct 47379226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 51395736 - 51395619
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||||||||        ||||||||||||||||    
T  51395736 catatttaatttgtttcatgttaaaaaaattctaaattttagtaaatgaatcactcatagtgtt-taaacttgtctaaaaaaaatcgttcaaaaatttaa 51395638  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  51395637 gagtttaaggataattaaa 51395619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 53423689 - 53423613
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa--ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||  |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  53423689 catatttaatttatttcatgttaaaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtct 53423613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 10085662 - 10085772
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    ||||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||          ||||||||||||||| |||||     
T  10085662 taatttgtttcatgttaaaa-attctaaattttagtaaatgaagatttcatagtgttctaaatttgtcacaaaaaaaccgttcaaaaatttaagagttta 10085760  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  10085761 aggataattaaa 10085772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 52948054 - 52947972
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| | | ||||| | ||| ||||||||||||    
T  52948054 aattcaaatttgtttaatt-atgtttaaactcttgaatttttgaacaattttttatatatgtgttcaaaacattactaaaagtt 52947972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 7490863 - 7490937
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||||||||||| |||||||| |||||| |||||||| |||| |||| ||||||||||||||||||||    
T  7490863 catatttaattcgtttcatcttaaaaaaatctaaactttagtaattgaaccttttatagtgttctaaacttgtct 7490937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 23473773 - 23473675
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||| ||||||||||||||||||| ||||| |||| |||||||||| || ||||||  |||||||| ||||||||||| |||||||| | ||||||||    
T  23473773 tcaatgcaaatttgtttaatttatgcttaaagtcttaagtttttgaataatttttttgtagacgtgtcaagaacgttaccaaaagttcctctgcaaaaa 23473675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 10321866 - 10321983
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||| ||||| ||||||||||||||||| |||| |||||| |||||||||||||||| |        | ||||||||||||||     
T  10321866 catatttaattcttttcatgataaaatattctaaattttagtaattgaacctttcacagtgttctaaacttgtgtcaaaaaaattgttcaaaaatttaag 10321965  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| | ||||||||||    
T  10321966 agtttaaagataattaaa 10321983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 11670929 - 11670860
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||    
T  11670929 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 11670860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 20650628 - 20650555
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||| |  ||||| |||||||||    
T  20650628 catatttaattcatttcatgttaaaaaattctaaattttagtaaatgaatctttcgtgatgttccaaacttgtc 20650555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 23473601 - 23473485
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| |||||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||| |||        ||||||||||||||||     
T  23473601 catatttaatttgtttcatgttaaaaaattttaaattttagt-aatgaacctttcacagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaag 23473503  T
Q  297 agtttgaggataattaaa 314  Q
    |||||   ||||||||||    
T  23473502 agtttaccgataattaaa 23473485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 48082615 - 48082731
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||||||||||||||||| || ||||| ||||||||| | ||||||||||||||||||||| |        ||||| ||||||||||     
T  48082615 catatttaatttatttcatgttaaaaaattatagatttttgtaaatgaaccgttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaag 48082714  T
Q  297 agtttgaggataattaa 313  Q
    ||||| |||||||||||    
T  48082715 agtttaaggataattaa 48082731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 50824481 - 50824410
Alignment:
Q  28 caattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    |||||||||||||||||||||||| ||||   ||| |||||||||||||| |||| ||||||||||||||||    
T  50824481 caattcaaatttgtttaatttatgcttaatagcttaagtttttgaacaatatttttcagacgtgttaagaac 50824410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 4850272 - 4850382
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttga 303  Q
    ||||||||||||||| ||||||||||||| ||| |||||||| |||||||| |||||||||  |||||        ||||||||||||| || ||||| |    
T  4850272 aattcgtttcatgttgaaaaattctaaatattactaaatgaatctttcatattgttctaaatgtgtctcaataaaatcgttcaaaaattcaagagtttaa 4850371  T
Q  304 ggataattaaa 314  Q
    | |||||||||    
T  4850372 gaataattaaa 4850382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 11670119 - 11670205
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||| ||| ||||||| |||||||||||  ||| |||||| |||| ||| |||||||||    
T  11670119 tcaattcaaatttgtttaatttattcttaaacgcttaagttttttaacaattttttgtagatgtgttaggaacattattaaaagttc 11670205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 35061120 - 35061035
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  | |||||||| || |||| |||||||||||  ||||||||||||||| ||| |||||||||    
T  35061120 tcaattcaaatttgtttaatttattctaaaactcttaagatttt-aacaattttttgtagacgtgttaagaacattattaaaagttc 35061035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 38114336 - 38114288
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaa 245  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  38114336 catatttaattcgtttcatgttaaaaaattttaaattttagtaaatgaa 38114288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 44452256 - 44452328
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  44452256 catatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaacttgt 44452328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 20177999 - 20177933
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaa 264  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||||| ||| |||| |||||||||    
T  20177999 catatttaattcgtttcttgttaaaaaatt-taaattttagtaaatgaaccttccatattgttctaaa 20177933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 31470962 - 31471017
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||||||||||||||||||| ||||||||| | ||||||| |||||||||||    
T  31470962 tcaattcaaatttgtttaatttatttttaaactcgtaagttttttaacaatttttt 31471017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 52947863 - 52947760
Alignment:
Q  219 aaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnn-tcgttcaaaaatttaacagtttgaggataattaaataa 317  Q
    |||||||||||||||||||||||||||  ||| ||| |||||||||  |||||         |||||| ||||||||||||||| |||||||||||||||    
T  52947863 aaaaaattctaaattttagtaaatgaactttttataatgttctaaaagtgtctccaaaaaaatcgttctaaaatttaacagtttaaggataattaaataa 52947764  T
Q  318 attt 321  Q
    ||||    
T  52947763 attt 52947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 55938245 - 55938355
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||| |||||||||||||||||||| ||||||| | | ||||| ||||||||||||||| | |        ||||| |||||||||| |||||     
T  55938245 taattcgttttatgttaaaaaattctaaattctagtaaacg-acctttcgtagtgttctaaacttatttcaaaaaaatcgtttaaaaatttaagagttta 55938343  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  55938344 aggataattaaa 55938355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 38499295 - 38499384
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||  ||||||||| | || |  |||||||||||||||| |||| ||||||||||| ||||||||||||| | ||||||||    
T  38499295 aaatttgtttaatc-atgtttaaatttttaacgttttgaacaattttttgcagaagtgttaagaacattactaaaagttcatctgcaaaaa 38499384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 7490707 - 7490775
Alignment:
Q  36 atttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    |||||||||||||||||||| ||||||     |||||||||||||| |||||||||||||| || |||||||||    
T  7490707 atttgtttaatttatgtttacactctt-----tttgaacaatttttcacagacgtgttaagcacattactaaaa 7490775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 13603785 - 13603880
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    ||||||||||||||||||| ||| |||||||||| |||||| |||||||||||| ||||  | ||| |||| ||||||||||||| |  |||||||||    
T  13603785 aattcaaatttgtttaatt-atgcttaaactcttaagtttt-gaacaattttttgcagatattttatgaacattactaaaagttcctccgcaaaaatt 13603880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 48220011 - 48219943
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaac 265  Q
    ||||| |||||  |||| ||||||||||||||||||||||  ||||||| |||||||| ||||||||||    
T  48220011 catatttaattaatttcttgttaaaaaattctaaattttaacaaatgaacctttcataatgttctaaac 48219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 47463535 - 47463612
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatag---tgttctaaacttgtct 271  Q
    ||||| ||||| |||| |||||||||||   |||||||||||||||||| |||||||||   ||||||||||||||||    
T  47463535 catatttaatttgtttaatgttaaaaaaaattaaattttagtaaatgaacctttcatagtgttgttctaaacttgtct 47463612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 51876179 - 51876297
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaat--tctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaattta 294  Q
    ||||| ||||||||||||||||||||| |  ||||||||||| ||||||||  ||||| | |||| |||||||||||        |||||||||| ||||    
T  51876179 catatttaattcgtttcatgttaaaaacttgtctaaattttaataaatgaacatttcacattgttataaacttgtctaaaaaaattcgttcaaaagttta 51876278  T
Q  295 acagtttgaggataattaa 313  Q
    | ||||| || ||||||||    
T  51876279 agagtttaagaataattaa 51876297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 47379471 - 47379386
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||| ||| ||| |||||| |||||| ||| |   |||| ||||||||||||||||  ||||||||||||    
T  47379471 tcaattcaaatttgtttaatt-atgcttatactcttaagttttcgaaaatgcttttgcagacgtgttaagaacaatactaaaagttc 47379386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 53571008 - 53571078
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgag-tttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| ||||||| || || ||||| |||||||||||  ||| ||||||||    
T  53571008 tcaattcaaatttgtttaatttatgcttaaactgttaagtttttttaacaattttttgtagatgtgttaag 53571078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 48220180 - 48220100
Alignment:
Q  28 caattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    |||||||||||||||||| ||||| ||||||||||  |||||| |||| | |||| ||||  |||||||||| |||||||||    
T  48220180 caattcaaatttgtttaa-ttatgcttaaactcttatgttttttaacattcttttgcagatatgttaagaacattactaaaa 48220100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 53569155 - 53569224
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgag-tttttgaacaattttttacagacgtgttaa 95  Q
    ||||||||||||||||||||||||| ||||||| || || ||||| |||||||||||  ||| |||||||    
T  53569155 tcaattcaaatttgtttaatttatgcttaaactgttaagtttttttaacaattttttgtagatgtgttaa 53569224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 28163836 - 28163777
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||||| |||| ||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  28163836 tttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttctaaacttgt 28163777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 34513305 - 34513227
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | |||| |||||| |||| ||||||||    
T  34513305 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgtcaagaacattacgaaaagttc 34513227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 35821294 - 35821357
Alignment:
Q  209 gtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    |||||||||||||||| || |||||| ||||| ||||| |||||||  ||||||||||||||||    
T  35821294 gtttcatgttaaaaaaattgtaaattctagtatatgaacctttcatgatgttctaaacttgtct 35821357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 35351954 - 35351913
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaa 76  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  35351954 aaatttgtttaatt-atgtttaaactcctgagtttttgaacaa 35351913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 6818087 - 6818023
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    |||||||||||||| ||||||||||||||   |||||||||||||||||  | |||| ||||||||    
T  6818087 aaatttgtttaatt-atgtttaaactcttacatttttgaacaattttttgtatacgttttaagaac 6818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 25243897 - 25243861
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  25243897 tcaattcaaatttgttcaatttatgcttaaactcttg 25243861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 25422979 - 25422943
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  25422979 tcaattcaaatttgttcaatttatgcttaaactcttg 25422943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 31317851 - 31317815
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  31317851 tcaattcaaatttgttcaatttatgcttaaactcttg 31317815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 34513142 - 34513070
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| |||| ||||||||||||||||||| ||| || |  || ||||||||||||||    
T  34513142 catatttaatttatttcatgctaaataattctaaattttagtaaacgaacctcttgtaatgttctaaacttgt 34513070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 35055124 - 35055160
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  35055124 tcaattcaaatttgttcaatttatgcttaaactcttg 35055160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 44208875 - 44208911
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  44208875 tcaattcaaatttgttcaatttatgattaaactcttg 44208911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 44452093 - 44452184
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | || |||||||| | || |||||||  | ||||||||||    
T  44452093 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgcaaaaatt 44452184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 47939867 - 47939788
Alignment:
Q  32 tcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||||||||| ||| ||||||| ||   ||||| | |||||||||  |||| |||||||||| ||||||||||||    
T  47939867 tcaaatttgtttaatt-atgcttaaacttttagctttttaagcaattttttgtagacatgttaagaacattactaaaagtt 47939788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 13501206 - 13501303
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  13501206 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaataacattactaaaagttcctatgcaaaaa 13501303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 51561642 - 51561545
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  51561642 tcaattcaaatttgtttactttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaaaaa 51561545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 51561471 - 51561342
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  51561471 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 51561372  T
Q  297 agtttgaggataattaaataaatttgaatt 326  Q
    ||||| ||||||||| || |||||||||||    
T  51561371 agtttaaggataatttaacaaatttgaatt 51561342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 30719479 - 30719577
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttac-agacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||    
T  30719479 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaagacgtgttaagaacattactaaaagtttctatgcaaaaa 30719577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 30719651 - 30719768
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  30719651 catatttaattcgattcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 30719750  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  30719751 agtttaaggataattaaa 30719768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 31400219 - 31400302
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  31400219 tcaattcaaatttgtttaatttatgtttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaag 31400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 13501377 - 13501504
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||        | ||||||||||||||     
T  13501377 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttc--agtgttctaaacttgtctcaaaaaaattgttcaaaaatttaag 13501474  T
Q  297 agtttgaggataattaaataaatttgaatt 326  Q
    ||||| |||||||||||| |||||||||||    
T  13501475 agtttaaggataattaaacaaatttgaatt 13501504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 19791239 - 19791325
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  19791239 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttc 19791325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 43504938 - 43505062
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||     
T  43504938 catatttaattcgtttcatgttaaaaaattccaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaacagttcaaaaatttaag 43505037  T
Q  297 agtttgaggataattaaataaattt 321  Q
    ||||| |||||||||||| ||||||    
T  43505038 agtttaaggataattaaacaaattt 43505062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 52493699 - 52493817
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct-nnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||         ||||||||||||||||    
T  52493699 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaccttgtctaaaaaaaaatcgttcaaaaatttaa 52493798  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  52493799 gagtttaaggataattaaa 52493817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 26020692 - 26020611
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  26020692 aattcaaatttgtttaatttatgcttaaaatcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaag 26020611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 33709069 - 33708952
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  33709069 catatttaattcttttcatattaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 33708970  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  33708969 agtttaaggataattaaa 33708952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 37986868 - 37986751
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  37986868 catatttaattcgtttcatgttaaacaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 37986769  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  37986768 agtttaaggataattaaa 37986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 12368366 - 12368250
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||| ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||        |||||||||||||||| |    
T  12368366 atatttaatacgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 12368267  T
Q  298 gtttgaggataattaaa 314  Q
    |||| ||||||||||||    
T  12368266 gtttaaggataattaaa 12368250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 47008920 - 47008844
Alignment:
Q  48 tatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  47008920 tatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctctgcaaaaa 47008844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 21794413 - 21794496
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||||||    
T  21794413 attcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcacacgtgttaagaacattaataaaagttc 21794496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 35530781 - 35530872
Alignment:
Q  22 catcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||  ||||||||||||||| |||||||||||||    
T  35530781 catcatcaattcaaatttgtttaatttatgcttaaactcttgagcttttaaacaatcttttgtagacgtgttaagaacattactaaaagttc 35530872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 30982677 - 30982591
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  30982677 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaactttactaaaagttc 30982591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 43504775 - 43504861
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||    
T  43504775 tcaattcaaatttgtttaatttatgcttaaacttttgagtttttgaacaatttttaacagaagtgttaagaacattacgaaaagttc 43504861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 46597070 - 46596984
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  46597070 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 46596984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 11999889 - 12000006
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||        ||||||||||||||||     
T  11999889 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacatttcatagtgttctaaacatgtctcaaaataatcgttcaaaaatttaag 11999988  T
Q  297 agtttgaggataattaaa 314  Q
    | ||| ||||||||||||    
T  11999989 actttaaggataattaaa 12000006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 36368185 - 36368100
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| ||||||||||||    
T  36368185 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 36368100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 46517296 - 46517223
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  46517296 catatttaattcgtttcatgttaaaaaagtctaaattttagtaaatgaacctttcatagtgttctaaacttgtc 46517223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 15053640 - 15053726
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  15053640 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 15053726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 36368014 - 36367940
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  36368014 catatttaattcgtttcatgttaaaaaattctaaattttagtaattaaacctttcatagtgttctaaacttgtct 36367940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 52493528 - 52493614
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  52493528 tcaattcaaatttgattaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 52493614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 30982506 - 30982389
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||        ||||||||||||||||     
T  30982506 catatttaattcgcttcatgttaaaaaattctaaattttagtaattgaacctttcatattgttctaaacttgtctcgaaaaaatcgttcaaaaatttaag 30982407  T
Q  297 agtttgaggataattaaa 314  Q
    | ||| |||||| |||||    
T  30982406 attttaaggatatttaaa 30982389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 2059078 - 2059145
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  2059078 aattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcatacgtgttaag 2059145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 2059516 - 2059639
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||| |||| ||| |||||||||||| |||        ||||||||||||||||     
T  2059516 catatttaatttgtttcatgttaacaaattctaaattttagtaaatgaaccttttataatgttctaaacttatct-aaaaaaatcgttcaaaaatttaaa 2059614  T
Q  297 agtttgaggataattaaataaattt 321  Q
    ||||| |||||||||||| ||||||    
T  2059615 agtttaaggataattaaacaaattt 2059639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 19791410 - 19791481
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttg 268  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  19791410 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttataaacttg 19791481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 28700954 - 28701041
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | ||||||||||  |||||||||||||    
T  28700954 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttttgcaaatgtgttaagaatattactaaaagttc 28701041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 11999722 - 11999804
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||| |||||||||| ||||||| || ||||||||  ||||||||||||||| |||||||||||||    
T  11999722 ttcaaatttgtttaatttatgcttaaactcttaagttttttaataattttttgtagacgtgttaagaacattactaaaagttc 11999804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 37986989 - 37986903
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| | ||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  37986989 tcaattcaaatttgtttaatttattcttaaactcttaaattttttaacaattttttgtagacgtgttaagaacattactaaaagttc 37986903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 310
Target Start/End: Original strand, 21091220 - 21091333
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||  ||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||        ||||||||||||||||     
T  21091220 catatttaattcatttcgcgttaaaaaattataaattttaataaatgaacctttcacagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaag 21091319  T
Q  297 agtttgaggataat 310  Q
    ||||||||||||||    
T  21091320 agtttgaggataat 21091333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 26020523 - 26020450
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26020523 catatttaattcatttaatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacttgtc 26020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 26805786 - 26805690
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||  ||||||||||||||  ||||||||||||| | ||||||||    
T  26805786 tcaattcaaatttgtttaatt-atgcttaaactcttgaatttttaaacaattttttgtagacgtgttaagaatattactaaaagttcctctgcaaaaa 26805690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 36248495 - 36248612
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| |||||||||||||||||| ||||||||| ||| |||| ||||||||||||| |||||||||||        || |||||||||||||     
T  36248495 catatttaatttgtttcatgttaaaaaattttaaattttattaattgaacctttcatagtgttttaaacttgtctcaaaaaattcattcaaaaatttaag 36248594  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  36248595 agtttaaggataattaaa 36248612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 10041532 - 10041449
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||  |||||||  || |||||||||||||    
T  10041532 attcaaatttgtttaatttatgtttaaattcttgagtttttaaacaattttttataggtgtgttaaacacattactaaaagttc 10041449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 12368521 - 12368439
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| ||| |||||||||    
T  12368521 ttcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattattaaaagttc 12368439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 33709240 - 33709154
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| || |||| |||||||||||  ||||||||||||||| || ||||||||||    
T  33709240 tcaattcaaatttgtttaatttatacttaaactcttaagatttttaacaattttttgtagacgtgttaagaacattcctaaaagttc 33709154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 47008770 - 47008697
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  47008770 catatttaattcgttttatgttaaaaa-ttctaaattttagtaaataaacctttcatagtgttctaaacttgtct 47008697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 12367703 - 12367772
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||| ||||||||    
T  12367703 tcaattcaaatttgtttaatttatgtttaaactcttaagttttttaacaattttttgtagatgtgttaag 12367772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 46596900 - 46596783
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| ||||||||||| ||||||||||| ||| |||| |||||| ||||||||||||||||||         |||||||||||||||     
T  46596900 catatttaattcgttttatgttaaaaaaatctaaattttaataattgaacctttcacagtgttctaaacttgtctaaaaaaaaccgttcaaaaatttaag 46596801  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  46596800 agtttaagaataattaaa 46596783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 39681978 - 39682090
Alignment:
Q  210 tttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggata 308  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||        | ||||| ||| |||| ||||| ||||||    
T  39681978 tttcatgttaaaaaaattctaaattttagtaaatgaacctttcatagtgttttaaacttgtcttaaaaaaattgttcataaacttaagagtttaaggata 39682077  T
Q  309 attaaataaattt 321  Q
    |||||| ||||||    
T  39682078 attaaacaaattt 39682090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 7565296 - 7565229
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||    
T  7565296 aattcatttcatgttaaaaaattctaaattttagtaaatgtacctttcgtaatgttctaaacttgtct 7565229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 21794511 - 21794621
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||| ||| ||||||||||||||||||||| |||||| ||||| || | ||||||||||||||        |||| ||||||||||| |||||     
T  21794511 taattcgttttatggtaaaaaattctaaattttagttaatgaacctttcttaatattctaaacttgtctcaaaaaattcgtacaaaaatttaagagttta 21794610  T
Q  303 aggataattaa 313  Q
    |||||||||||    
T  21794611 aggataattaa 21794621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 26805616 - 26805498
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaat-tctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||||||||||||||||||||  | |||||||| |||||||||  |||| |||||||||||||||||||        | ||||||||||||||    
T  26805616 catatttaattcgtttcatgttaaaaaaaatataaattttggtaaatgaacatttcttagtgttctaaacttgtcttaaaaaaatagttcaaaaatttaa 26805517  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  26805516 gagtttaaggataattaaa 26805498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 28701126 - 28701192
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaa 263  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  28701126 catatttaattcgttttatgttaaaaagttctaaattttagtaaatgaacctctcatagtgttctaa 28701192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 36248333 - 36248419
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||| ||  |||| |||||||||  |||||||||||||    
T  36248333 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaatttcttgtagacatgttaagaatattactaaaagttc 36248419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 15053799 - 15053872
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    |||| |||||||||||||||||||| ||||||||||||| | | |||  |||||||||||||||||||||||||    
T  15053799 atatttaattcgtttcatgttaaaacattctaaattttattgattgagcctttcatagtgttctaaacttgtct 15053872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 31400391 - 31400463
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| ||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  31400391 catatttaatttatttcatgataaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgt 31400463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 35530958 - 35531074
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaat-tctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    |||| ||||||||||| ||||||||||  |||||||||| |||||||||  ||||||||||||||||| ||||||        ||||||||||||||||     
T  35530958 atatttaattcgtttcttgttaaaaaaaatctaaattttggtaaatgaacatttcatagtgttctaaatttgtct-taaaaaatcgttcaaaaatttaag 35531056  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  35531057 agtttaaggataattaaa 35531074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 29231939 - 29231884
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  29231939 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttttt 29231884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 21091051 - 21091136
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||| ||||||||||||||||| || |||| |||||||||||  |||||||||| |||| ||||  |||||||    
T  21091051 tcaattcaaatttgtttagtttatgtttaaactcttaag-ttttaaacaattttttgtagacgtgttacgaacattacataaagttc 21091136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 5430688 - 5430571
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||| ||||||||||||||||||||| |||||||||| ||||  || |||| |||||||||||         ||||||||||||||      
T  5430688 catatttaattcattttatgttaaaaaattctaaatttcagtaaatgaatcttttgtaatgttataaacttgtcttagaaaaaccgttcaaaaatttaca 5430589  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  5430588 agtttaaggataattaaa 5430571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 15054487 - 15054418
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||    
T  15054487 tcaattcaaatttatttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 15054418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 36249151 - 36249086
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaa 95  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| |||||||    
T  36249151 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaa 36249086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 37986209 - 37986278
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||  ||| ||||||||    
T  37986209 tcaattcaaatttgtttaatttatgcttaaactcttaaattttttaacaattttttgtagatgtgttaag 37986278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 10041363 - 10041247
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||||| | ||||||||||| | |||||||| ||||||||| ||||||| ||||||||||||| |||        ||||| |||||||||| |    
T  10041363 atatttaattcgtataatgttaaaaaaatttaaattttggtaaatgaacctttcatggtgttctaaacttttcttaaaaaaatcgttaaaaaatttaaga 10041264  T
Q  298 gtttgaggataattaaa 314  Q
    |||| | ||||||||||    
T  10041263 gtttaaagataattaaa 10041247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 13083446 - 13083529
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||| |||||||||| ||| ||| |||||  ||||||||||||| ||||| |||| ||||||||||| |||||||||||||    
T  13083446 aattcaaacttgtttaatt-atgcttatactctcaagtttttgaacaacttttttcagatgtgttaagaacattactaaaagttc 13083529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 17814493 - 17814398
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaa 123  Q
    ||||||||||  |||||||||||| |||||| | || |||||||||| |||||| | |||| |||||||  |||||||||||||||||| |||||||    
T  17814493 tcaattcaaaaatgtttaatttatatttaaatt-ttaagtttttgaataattttgtgcagatgtgttaaatacgttactaaaagttcttttgcaaaa 17814398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 31024345 - 31024266
Alignment:
Q  33 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||| ||  ||||||||||||| | |||||||||||||    
T  31024345 caaatttgttcaatt-atgtttaaactcttatgtttttgaacaatttcttgtagacgtgttaagaccattactaaaagttc 31024266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 33707663 - 33707580
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||| |||||||||||||| ||  |||||||||| | |||||||||||| |||| |||||||||| ||||| |||||||||||||    
T  33707663 aatttaaatttgtttaatt-attcttaaactcttaattttttgaacaatcttttgcagacgtgttgagaacattactaaaagttc 33707580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 42971953 - 42972036
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||| ||||||||| |||||||||||||| |||||| ||| ||| ||||  ||||||||||||||  |||||||||||||    
T  42971953 aattcaaatctgtttaatt-atgtttaaactcttaagttttagaaaaatcttttgtagacgtgttaagaatattactaaaagttc 42972036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 52882432 - 52882360
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  52882432 catatttaattaatttcatgttaaaaaattctaaattttagtaaacgaaccttttgtaatgttctaaacttgt 52882360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 12251656 - 12251567
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| |||||||| | ||||||||    
T  12251656 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaa 12251567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 35188357 - 35188418
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    |||||||||||||||||||| ||||||||| ||||| |||||| || ||| |||||||||||    
T  35188357 tttcatgttaaaaaattctatattttagtatatgaatctttcagagagttttaaacttgtct 35188418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 12897215 - 12897143
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||||||||||| |||||| ||| ||||  || ||||||||||||||    
T  12897215 catatttaatttatttcatgttaaaaaattctaaatttcagtaaacgaaccttttgtaatgttctaaacttgt 12897143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 27551633 - 27551561
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||| ||||||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  27551633 catatttaatttatttcatgtaaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaacttgt 27551561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 319
Target Start/End: Original strand, 42972161 - 42972261
Alignment:
Q  219 aaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaataaa 318  Q
    ||||||||||||||||||||||||||| |||| ||| | |||||||  |||||        ||||| |||||||||| ||||| |||||||||||| |||    
T  42972161 aaaaaattctaaattttagtaaatgaaccttttataatcttctaaaagtgtctccgaaaaatcgttaaaaaatttaagagtttaaggataattaaaaaaa 42972260  T
Q  319 t 319  Q
    |    
T  42972261 t 42972261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 49767857 - 49767929
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| ||| ||||  || ||||||| ||||||    
T  49767857 catatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctagacttgt 49767929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 52881759 - 52881831
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| |||  |||  || ||||||||||||||    
T  52881759 catatttaatttatttcatgttaaaaaattctaaattttagtaaacgaatattttgtaatgttctaaacttgt 52881831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 20357120 - 20357174
Alignment:
Q  211 ttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaac 265  Q
    |||||||||||||||||||||||||| ||||| || |||| ||| ||||||||||    
T  20357120 ttcatgttaaaaaattctaaattttattaaataaaccttttataatgttctaaac 20357174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 20562835 - 20562781
Alignment:
Q  211 ttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaac 265  Q
    |||||||||||||||||||||||||| ||||| || |||| ||| ||||||||||    
T  20562835 ttcatgttaaaaaattctaaattttattaaataaaccttttataatgttctaaac 20562781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 27550800 - 27550889
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||  ||||||| || || |||||||||||||||| || | ||||||||||| |||| |||||||| | ||||||||    
T  27550800 aaatttgtttaatt-atacttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaa 27550889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 31024167 - 31024109
Alignment:
Q  210 tttcatgttaaaaaattc-taaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||||||||||||| || || ||||||||||||||| ||||| |||||||||||||||    
T  31024167 tttcatgttaaaaaaatcctagattttagtaaatgaacctttcgtagtgttctaaactt 31024109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 48218138 - 48218049
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||| |  || |||||||||||||||| || | ||||||||||| |||| |||||||| | ||||||||    
T  48218138 aaatttgtttaatt-atgcttaaactttaaagattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgcaaaaa 48218049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 1297156 - 1297104
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||    
T  1297156 aattcaaatttgtttaatt-atgtttaaactcttaaatttttgaataatttttt 1297104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 6216416 - 6216375
Alignment:
Q  280 tcgttcaaaaatttaacagtttgaggataattaaataaattt 321  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  6216416 tcgttcaaaaatttaatagtttaaggataattaaataaattt 6216375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 33707481 - 33707420
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    |||||| |||||||| | |||||||||||||||||||||||  || |||| |||||||||||    
T  33707481 tttcatattaaaaaaatttaaattttagtaaatgaaacttttgtaatgttttaaacttgtct 33707420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 48410127 - 48410207
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttga-gtttttgaacaattttttacagacgtgttaagaacgttactaaaagttct 114  Q
    |||||||||||||| ||| ||||||| || | | |||||||||||||||| |||| ||||||||||| ||||||||| ||||    
T  48410127 aaatttgtttaatt-atgcttaaactttttaagattttgaacaattttttgcagaagtgttaagaacattactaaaatttct 48410207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 12251492 - 12251420
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||| ||||||||||||||||||||||||| ||| ||||  || |||| |||||||||    
T  12251492 catatttaatttatttcatattaaaaaattctaaattttagtaaacgaacctttagtaatgttataaacttgt 12251420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 11397039 - 11397117
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| ||||||  || || |||||||||||||||| || | ||||||||||| |||| ||||||||    
T  11397039 aaatttgtttaatt-atgcttaaacatttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttc 11397117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 13501506 - 13501452
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||||| ||  |||||||||| | |||||||||||||||||    
T  13501506 tcaattcaaatttgtttaatt-atccttaaactcttaaatttttgaacaatttttt 13501452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 25351963 - 25352041
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||| ||| |||| ||||||||    
T  25351963 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaaaaacattacgaaaagttc 25352041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 26207482 - 26207547
Alignment:
Q  47 ttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||| ||| |||||| |||||| ||||||||||||  | || |||||||||| ||||||||||||    
T  26207482 ttatgcttagactcttaagttttagaacaattttttcgaaacatgttaagaacattactaaaagtt 26207547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 25352125 - 25352197
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| |||| ||||||||||||||||||| ||| ||||  || |||| |||||||||    
T  25352125 catatttaatttatttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttttaaacttgt 25352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 35188186 - 35188214
Alignment:
Q  34 aaatttgtttaatttatgtttaaactctt 62  Q
    |||||||||||||||||||||||||||||    
T  35188186 aaatttgtttaatttatgtttaaactctt 35188214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 36362477 - 36362513
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  36362477 tcaattcaaatttgttcaatttatgcttaaactcttg 36362513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 46596153 - 46596189
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  46596153 tcaattcaaatttgttcaatttatgcttaaactcttg 46596189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Original strand, 48410328 - 48410356
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagt 238  Q
    |||||||||||||||||||||||||||||    
T  48410328 tttcatgttaaaaaattctaaattttagt 48410356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 38173902 - 38173999
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||    
T  38173902 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcgtgttaagaacattactaaaagttcctatacaaaaa 38173999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 25250016 - 25250113
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  25250016 tcaattcaaatttgtttaatttatatttaaactcttgagtttttgaataattttttacagacgtgttaagaacattactaaaagtttctatgcaaaaa 25250113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 25250185 - 25250314
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        || |||||||||||||     
T  25250185 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcattcaaaaatttaag 25250284  T
Q  297 agtttgaggataattaaataaatttgaatt 326  Q
    ||||| ||||||||| || |||||||||||    
T  25250285 agtttaaggataatttaacaaatttgaatt 25250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 21749566 - 21749663
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||  ||||||||||    
T  21749566 tcaattcaaatttgtttaatttattcttaaactcttgagtttttgaacaattttttacgaacgtgttaagaacattactaaaagtttctatgcaaaaa 21749663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 23917328 - 23917413
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  23917328 tcaattcaagtttgtttaatttatgcttaaactcttgagtttttgaacaattttttacaaacgtgttaagaacattactaaaagtt 23917413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 45406834 - 45406959
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||        ||||||||||||||||     
T  45406834 catatttaattcgattcatgttagaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttttcttataaaaatcgttcaaaaatttaag 45406933  T
Q  297 agtttgaggataattaaataaatttg 322  Q
    ||||| |||||||||||| |||||||    
T  45406934 agtttaaggataattaaacaaatttg 45406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 40762895 - 40762812
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  40762895 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttgatagacgtgttaagaacattactaaaag 40762812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 37178941 - 37179027
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  37178941 tcaattcaaatttgtttaatttatgtttaaactcttaaattttttaacaattttttatagacgtgttaagaacattactaaaagttc 37179027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 53518079 - 53517993
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  53518079 tcaattcaaatttgtttaatttatgcttaaacttttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttc 53517993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 11293965 - 11294082
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |        ||||||||||||||||     
T  11293965 catatttaattcgtttcatcttaaaaaattctaaattttagtaaatgaacttttcatagtgttctaaacttgtgtaaaagaagtcgttcaaaaatttaag 11294064  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  11294065 agtttaaggataattaaa 11294082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 23883678 - 23883588
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||| | ||||||||    
T  23883678 aaatttgtttaatttatgcttaaactctggagtttttgaacaattttttgcatacgtgttaagaacattactaaaagttcctctgcaaaaa 23883588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 32943000 - 32943086
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  32943000 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 32943086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 45235641 - 45235555
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||| ||| |||||||||    
T  45235641 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttatagacgtgttaagaacattattaaaagttc 45235555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 45420078 - 45419983
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| | ||||||||    
T  45420078 tcaattcaaatttgttt--tttatgcttaaactcttgagtttttgaacaattttttgcatacgtgttaagaacattactaaaagttcctctgcaaaaa 45419983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 39562839 - 39562762
Alignment:
Q  33 caaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  39562839 caaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaag 39562762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 44809135 - 44809038
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| || ||||||||||||  ||||||||||||| | ||||||||    
T  44809135 tcaattcaaatttgtttaatttatgcttaaactctggagtttttaaacaattttttgcacacgtgttaagaatattactaaaagttcctttgcaaaaa 44809038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 50615208 - 50615091
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  50615208 catatttaattcgtttcatgttaaaaaattctaaatttttttaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 50615109  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| |||| |||||||    
T  50615108 agtttaaggaaaattaaa 50615091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 53517908 - 53517791
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||         ||||||||||||||||     
T  53517908 catatttaattcgtttcatgttaaaaatttctaaattttagtaaatgaacctttcatagtgttataaacttatcataaaaaaatcgttcaaaaatttaaa 53517809  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  53517808 agtttaaggataattaaa 53517791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 301
Target Start/End: Original strand, 32147167 - 32147271
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||        ||||||||||||||||     
T  32147167 catatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacatttcatagtgttctaaacttgtctccaaaaaatcgttcaaaaatttaag 32147266  T
Q  297 agttt 301  Q
    |||||    
T  32147267 agttt 32147271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 46295051 - 46295134
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  46295051 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaaatttttacagacgtgttaagaacgttattaaaag 46295134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 53397095 - 53397194
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||   |||||||||||||| ||||||||||||| |  |||||||||    
T  53397095 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtcgacgtgttaagaacattactaaaagttcctccgcaaaaatt 53397194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 29348275 - 29348370
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||| ||||||||||  ||||||||||||| | ||||||||    
T  29348275 tcaattcaaatttgtttaatttatgcttaaact--tgagtttttgaacaattttttgcagaagtgttaagaatattactaaaagttcctttgcaaaaa 29348370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 32146996 - 32147082
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  32146996 tcaattcaaatttgtctaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 32147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 3173802 - 3173705
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||| |||||| ||||||||| |||||| |||||  | ||||||||||    
T  3173802 aattcaaatttgtttaatttatgattaaattcttgaatttttgaacaattttttgcagacgcgttaagaacattactataagtttctctgcaaaaatt 3173705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 27492485 - 27492602
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||||||||||||        ||||||||||||||       
T  27492485 catatttaattcgtttcatgttagaaaattctaaattttaataaatgaacatttcatagtgttctaaacttgtctcaaaaatatcgttcaaaaatttggg 27492584  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  27492585 agtttaaggataattaaa 27492602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 28685303 - 28685392
Alignment:
Q  24 tcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||| |||| || |||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  28685303 tcatcaatttaaatgtgattaatttatgcttaaactcttaagtttttgaacaattatttgcagacgtgttaagaacattactaaaagttc 28685392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 32943157 - 32943274
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||| || |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||        ||||||||||||||||     
T  32943157 catatttaattcttttaatattaaaaaattctaaattttagtaattgaacctttcatagtgttcaaaacttgtctcaaaaaaatcgttcaaaaatttaag 32943256  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  32943257 agtttaaggataattaaa 32943274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 38174073 - 38174194
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||| |        |||||||| |||||||     
T  38174073 catatttaattcgtttcatgttaaaaaaatttaaattttagtatatgaacctttcatagtgttctaaacttgtttcaaaaaaatcgttcaataatttaag 38174172  T
Q  297 agtttgaggataattaaataaa 318  Q
    ||||| | ||||||||||||||    
T  38174173 agtttaaagataattaaataaa 38174194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 40762724 - 40762607
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||| |        |||||||||| |||||     
T  40762724 catatttaattcatttcatgttaaaaaattctagattttagtaattgaatctttcatagtgttctaaacttgtttaaaaaaaatcgttcaaaattttaag 40762625  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  40762624 agtttaaggataattaaa 40762607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 45419909 - 45419792
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||| || ||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||        ||||||||||||||||     
T  45419909 catatttaactcatttaatgttaaaaaattctaaattttagtaaatgaacctttcataatgttctaaacttgtctaaaaaaaatcgttcaaaaatttaag 45419810  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| | ||||||||||    
T  45419809 agtttaaagataattaaa 45419792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 117565 - 117454
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||||||||||||||| | ||||||||| ||| |||| |||||||||||||||||||||||||        || ||||||||||||| |||||     
T  117565 taattcgtttcatgttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcattcaaaaatttaagagttta 117466  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  117465 aggataattaaa 117454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 19669699 - 19669786
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactc-ttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||  ||||||||||||||| |||||||| ||||    
T  19669699 tcaattcaaatttgtttaatttatgtttaaactctttaagttttttaacaattttttgtagacgtgttaagaacattactaaatgttc 19669786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 117729 - 117643
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||| ||||||||||| |||||||||||||    
T  117729 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttttagatgtgttaagaacattactaaaagttc 117643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 19669877 - 19669995
Alignment:
Q  203 taattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagttt 301  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||||||||||||        |||||||||||||||| ||||     
T  19669877 taattcgtttcatgttaaaaaaattctaaattttagtaattgaacctttgatagtgttctaaacttgtct-aaaaaaatcgttcaaaaatttaagagttc 19669975  T
Q  302 gaggataattaaataaattt 321  Q
     || ||||||||||||||||    
T  19669976 aagaataattaaataaattt 19669995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 23883514 - 23883440
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||||||||||    
T  23883514 catatttaattcgtttcatgttaaaaaattgtaaatattagtaaatgaaccttttatagtgttctaaacttgtct 23883440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 37179112 - 37179230
Alignment:
Q  197 catatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||        |||||||||| |||||    
T  37179112 catatttaattcgtttgatgttaaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaattttaa 37179211  T
Q  296 cagtttgaggataattaaa 314  Q
     | ||| ||||||||||||    
T  37179212 gaatttaaggataattaaa 37179230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 45235468 - 45235394
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  45235468 catatttaattcgtttcatgttaaaatattctaaattttagtaattgaacctttcaaagtgttctaaacttgtct 45235394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 50615366 - 50615280
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||  |||||||||||||    
T  50615366 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaatattactaaaagttc 50615280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 53439324 - 53439410
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||   |||||||||||||| |||||||||||||    
T  53439324 tcaattcaaatttgtttaatttatgcttaaactcttacgttttttaacaattttttttcgacgtgttaagaacattactaaaagttc 53439410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 44557703 - 44557586
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||   ||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  44557703 catatttaattcgtttcatgttaaaaaaaattaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 44557604  T
Q  297 agtttgaggataattaaa 314  Q
    || || ||||||||||||    
T  44557603 agattaaggataattaaa 44557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 21749743 - 21749811
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  21749743 taattcgtttcatattaaaaaattctaaattttagtaaatgaacctttcacagtattctaaacttgtct 21749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 37481351 - 37481251
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttga-gtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaat 125  Q
    |||||| |||||||||||||||||| |||||||||| | |||||| |||||||||||| ||| ||||||||||| ||||||||||||| |  ||||||||    
T  37481351 tcaatttaaatttgtttaatttatgcttaaactcttaatgttttttaacaattttttatagatgtgttaagaacattactaaaagttcctccgcaaaaat 37481252  T
Q  126 t 126  Q
    |    
T  37481251 t 37481251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 44808964 - 44808849
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct-nnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||         ||||||||||||||||    
T  44808964 catatttaattcattttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacctgtctaaaaaaaaatcgttcaaaaatttaa 44808865  T
Q  296 cagtttgaggataatt 311  Q
     ||||| |||||||||    
T  44808864 gagtttaaggataatt 44808849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 29348444 - 29348518
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  29348444 catatttagttcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaatttgtct 29348518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 53377437 - 53377511
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  53377437 catatttaattcgttccatgttagaaaattctaaattttagtaaatgaacctttcagagtgttctaaatttgtct 53377511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 53439482 - 53439551
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  53439482 catatttaattcgtttcatgttaaaaaattctaaa-tttagtaattgaacctttcatagtgttctaaactt 53439551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 27492313 - 27492398
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| || || |||| | ||| ||||||||||||    
T  27492313 tcaattcaaatttgtttaatttatgtttaaattcttaggtttttgaacaattttttgcatacatgtttaaaacattactaaaagtt 27492398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 53377326 - 53377410
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgtt--aagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||  |||||| ||| |||||||||    
T  53377326 ttcaaatttgtttaatttatgcttaaactcttaagtttttgaacaattgtttgcagacgtgttaaaagaacattaataaaagttc 53377410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 11045575 - 11045691
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||  | | ||||||||||||||        |||| |||||||||||     
T  11045575 catatttaattcgttttatggtaaaaaattctaaattttagtaaatgaacctttctcactattctaaacttgtctcaaaaaaatcgtacaaaaatttaag 11045674  T
Q  297 agtttgaggataattaa 313  Q
    ||||| |||||||||||    
T  11045675 agtttaaggataattaa 11045691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 15772157 - 15772074
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||| ||| ||||| |||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  15772157 aattcaaatttgtttaatt-atgcttaaaatcttaagtttttaaacaattttttgtagacgtgttaagaacattactaaaagttc 15772074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 23921197 - 23921082
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||| |||        ||||||||||||||||     
T  23921197 catatttaattc-tttcatgttaaaaaattctaaattttagaaaatgagcctttcatagtgttataaacttatct-aaaaaaatcgttcaaaaatttaag 23921100  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  23921099 agtttaaggataattaaa 23921082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 39562673 - 39562601
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  39562673 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgt 39562601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 313
Target Start/End: Original strand, 46295224 - 46295340
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||| ||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |        ||||| ||||||||||     
T  46295224 catatttaatttatttaatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaag 46295323  T
Q  297 agtttgaggataattaa 313  Q
    ||||| |||||||||||    
T  46295324 agtttaaggataattaa 46295340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 54269138 - 54269055
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||| |||||| ||| |||||||||| ||||||||||||||||||| ||  |||||||||||| |||||||||||||    
T  54269138 aattcaaatttggttaatt-atgcttaaactcttaagtttttgaacaattttttgcatgcgtgttaagaacattactaaaagttc 54269055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 116924 - 116993
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||    
T  116924 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 116993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 44555364 - 44555433
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||    
T  44555364 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 44555433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 50614546 - 50614615
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||    
T  50614546 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 50614615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 53397266 - 53397338
Alignment:
Q  197 catatctaattcgtttcatgtt--aaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||    
T  53397266 catatttaatttgtttcatgttttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaactt 53397338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 34995701 - 34995768
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaa 264  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||| |||| ||| |||||||||    
T  34995701 catatttaattcatctcatgttaaaaaattctaaattttagtaaatgaaccttttataatgttctaaa 34995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 11293800 - 11293862
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacg 89  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||| ||||||    
T  11293800 tcaattcaaatctgtttaatctatgcttaaactcttgaatttttgaacaattttttgcagacg 11293862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 19601549 - 19601634
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||| ||||||||||||||  |||||| |||| | |||| || || |||||||||| |||||||||||||    
T  19601549 tcaattcaaatttgtttaatt-atgtttaaactcttatgttttttaacattcttttgcaaacatgttaagaacattactaaaagttc 19601634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 8576025 - 8575953
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||| |||||||||||||||||||||||||||||||| ||| || |  || ||||||||||||||    
T  8576025 catatttaattcatttcatgttaaaaaattctaaattttagtaaacgaacctcttgtaatgttctaaacttgt 8575953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 9018204 - 9018260
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaact 266  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||| ||||||    
T  9018204 tttcatgttaaaaaattctaaatttttgtaaatgaacctttcacagtgttataaact 9018260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 44288028 - 44287972
Alignment:
Q  57 actcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  44288028 actcttaagtttttgaacaacttttgacagacgtgttaagaacattactaaaagttc 44287972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 44556759 - 44556687
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  44556759 catatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaacttgt 44556687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 33476300 - 33476241
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    |||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  33476300 tttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaacttgt 33476241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 44555919 - 44556013
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||| |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| |||||||| | ||||||||    
T  44555919 aatttaaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaa 44556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 52701168 - 52701246
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| ||||||| || || ||||||||||||||||||| | ||||||||||| |||| ||||||||    
T  52701168 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttacacaagtgttaagaacattacgaaaagttc 52701246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 11045404 - 11045450
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaaca 75  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  11045404 aattcaattttgtttaatttatgcttaaactcttgagtttttgaaca 11045450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 33475471 - 33475554
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||| |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| ||||||||    
T  33475471 aatttaaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttc 33475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 34995564 - 34995616
Alignment:
Q  60 cttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||||||||||||||||| ||||||||| | ||| ||||||||||||    
T  34995564 cttgagtttttgaacaattttttatagacgtgttcaaaacattactaaaagtt 34995616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 41927429 - 41927501
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||||||||||| |||||| ||| ||||  || ||||||||||||||    
T  41927429 catatttaatttatttcatgttaaaaaattctaaatttcagtaaacgaaccttttgtaatgttctaaacttgt 41927501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 44287891 - 44287843
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaa 245  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  44287891 catatttaattcatttcatgttaaaaaattctaaattttagcaaatgaa 44287843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 45387449 - 45387509
Alignment:
Q  64 agtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||| |||||||||||  ||||||||||||||| ||||||||||||| || |||||||    
T  45387449 agttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctacgcaaaaa 45387509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 8576191 - 8576101
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac-gttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||||||||||| || || |||||||||||||||| || | |||||||||||  |||  |||||||| ||||||||||    
T  8576191 aaatttgtttaatt-atgtttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatttaggaaaagttcatatgcaaaaa 8576101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 19601720 - 19601790
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttc--atagtgttctaaac 265  Q
    ||||| |||||  |||| ||||||||||||||||||||||| ||||||| |||||  ||||||||||||||    
T  19601720 catatttaattaatttcgtgttaaaaaattctaaattttagcaaatgaacctttcatatagtgttctaaac 19601790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 41928126 - 41928036
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgtt-aagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||| |||||| |||| |||||||| ||||||||||    
T  41928126 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaaagaacattacgaaaagttcatatgcaaaaa 41928036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 44557864 - 44557775
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttg---aacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||   |||||||||   |||||    |||||||||||  ||||||||||||||| |||||||||||||    
T  44557864 tcaattcaaatttgtttaatttattcctaaactcttttttttttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 44557775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 45406701 - 45406760
Alignment:
Q  53 ttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||| | ||||||||||||||||| ||||| |||| ||||| ||||||||||||    
T  45406701 ttaaactcttaaatttttgaacaattttttgcagacatgtttagaacattactaaaagtt 45406760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 31991074 - 31991151
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||||||| ||||||||||| || || |||||||||||||||| || | ||||||| ||| |||| |||||||    
T  31991074 aaatttgtttaatt-atgtttaaacttttaagattttgaacaattttttgcacaagtgttaaaaacattacgaaaagtt 31991151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 25232827 - 25232900
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaatt-ctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||||||||||||| ||||||||||||||| ||| ||||  || ||||||||||||||    
T  25232827 catatttaatttatttcatgttaaaaaatttctaaattttagtaaacgaaccttttctaatgttctaaacttgt 25232900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 31991251 - 31991308
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||||||||||||||||||||||||||||||  || ||||  || ||||||||||||    
T  31991251 tttcatgttaaaaaattctaaattttagtaaacaaaccttttgtaatgttctaaactt 31991308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 52701332 - 52701404
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  ||||||| |||| ||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  52701332 catatttaatttatttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttctaaacttgt 52701404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 54268956 - 54268922
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatga 244  Q
    |||||||||||||||||||||||||||| ||||||    
T  54268956 tttcatgttaaaaaattctaaattttaggaaatga 54268922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 8575373 - 8575466
Alignment:
Q  221 aaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||||||||||||||||||| ||| ||||  || |||||||||||||| |        ||||| |||||||||| ||||| |||||| |||||    
T  8575373 aaaattctaaattttagtaaacgaaccttttgtaatgttctaaacttgtatcaaaaaattcgttaaaaaatttaagagtttaaggatagttaaa 8575466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 26268844 - 26268779
Alignment:
Q  47 ttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||| | ||  ||||| ||||||||||||  |||||| |||||||| ||||||||||||    
T  26268844 ttatgtttaaaatattatgttttcgaacaattttttgtagacgtattaagaacattactaaaagtt 26268779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 32147895 - 32147859
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  32147895 tcaattcaaatttgttcaatttatgcttaaactcttg 32147859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 41927278 - 41927369
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    |||||||||||||| |||||||||   || || |||||||||||||||| || | ||||||||||| | || |||||||  | ||||||||||    
T  41927278 aaatttgtttaatt-atgtttaaatagttaagattttgaacaattttttgcacaagtgttaagaacatcacaaaaagtttatctgcaaaaatt 41927369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 52701947 - 52701900
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||||||||| ||| |||||||||| || ||||||||||||||||    
T  52701947 aaatttgtttaatt-atgcttaaactcttaagattttgaacaatttttt 52701900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 669 - 773
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| | |||| |||||    
T  669 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgcagacgtgataagaacattactaaaagttcatctgcacaaatt 768  T
Q  127 gtcgc 131  Q
    |||||    
T  769 gtcgc 773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 839 - 909
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  839 catatttaattcgtttcatcttaaaaaattctaaattttagtaaatgaaccttttatagtgttctaaactt 909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 4287 - 4193
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||    
T  4287 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcatgttaagaacattactaaaagttcctatgcaa 4193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 4095 - 3971
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||| |||     
T  4095 catatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatgtaag 3996  T
Q  297 agtttgaggataattaaataaattt 321  Q
    ||||| |||||||||||| ||||||    
T  3995 agtttaaggataattaaacaaattt 3971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 6209 - 6115
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||    
T  6209 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaaacgtgttaagaacattactaaaagttactatgcaaaaa 6115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 6041 - 5924
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||        ||||||||||| | ||     
T  6041 catatttaattcgtttgatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttccaaacttgtctcaaaaaaatcgttcaaaaaatcaag 5942  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  5941 agtttaaggataattaaa 5924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 25666038 - 25666143
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgc-aaaaat 125  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| ||||||    
T  25666038 tcaattcaaatttatttaatttatatttaaactcttgagtttttgaacaattttttacagacgtattaagaacattactaaaagttcctatgcgaaaaat 25666137  T
Q  126 tgtcgc 131  Q
    ||||||    
T  25666138 tgtcgc 25666143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 10357318 - 10357412
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||||    
T  10357318 attcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaa 10357412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 13372119 - 13372002
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  13372119 catatttaattcgtttcatgttaaaaatttctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaag 13372020  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  13372019 agtttaaggataattaaa 13372002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 18672362 - 18672479
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  18672362 catatttaattcgtttcatgttaaaaaattataaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 18672461  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  18672462 agtttaaggataattaaa 18672479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 31771487 - 31771604
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||     
T  31771487 catatttaattcatttcatgttaaaaaattttaaattttagtaaatgaaactttcatagtgttctaaacttgtgtcaaaaaaatcgttcaaaaatttaag 31771586  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  31771587 agtttaaggataattaaa 31771604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 40365008 - 40364891
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||        ||||||||||||||||     
T  40365008 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaaccttcaatagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaag 40364909  T
Q  297 agtttgaggataattaaa 314  Q
    |||||||||||| |||||    
T  40364908 agtttgaggatagttaaa 40364891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 41120738 - 41120835
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||||||| | ||||||||    
T  41120738 tcaattcaaatttgtttaatttatgcttaaacttttgagtttttaaacaattttttgcagacgtgttaagaacattactaaaagttcctctgcaaaaa 41120835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 33832418 - 33832332
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||    
T  33832418 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgtagacgtgttaagaacattactaaaagttc 33832332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 7439391 - 7439508
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||        ||||| ||||||||||     
T  7439391 catatttaattcgtttcatgttaaaaaattctaaattttactaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgtttaaaaatttaag 7439490  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| || |||||||||    
T  7439491 agtttaagaataattaaa 7439508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 10357486 - 10357603
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||     
T  10357486 catatttaattcgtttaaggttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaag 10357585  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| | ||||||||||    
T  10357586 agtttaaagataattaaa 10357603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 20721353 - 20721236
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  20721353 catatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 20721254  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| | ||||||||||    
T  20721253 agtttaacgataattaaa 20721236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 30784185 - 30784290
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaa-aat 125  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||| |||||||||| || | |||||| |||    
T  30784185 tcaattcaaatttgtttaatttatgcttaaactcttaagttttagaacaattttttgcagacgtgttaagaacattactaaaagctcatctgcaaataat 30784284  T
Q  126 tgtcgc 131  Q
    ||||||    
T  30784285 tgtcgc 30784290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 31436208 - 31436325
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||         ||||||||||||||||     
T  31436208 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacttgtcataaaaaaatcgttcaaaaatttaag 31436307  T
Q  297 agtttgaggataattaaa 314  Q
     |||| ||||||||||||    
T  31436308 tgtttaaggataattaaa 31436325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 35498588 - 35498673
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||    
T  35498588 tcaattcaaatttgtttaatttatgcttaaactcttgagttgttgaacaatttttcgcagacgtgttaagaacattactaaaagtt 35498673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 42274425 - 42274301
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||| |||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||        ||||||||||||||||     
T  42274425 catatttaattcgtttcatattaaaaaaatctaaattttggtaaatgaacctttcataatgttctaaacttgtcttaaaaaaatcgttcaaaaatttaag 42274326  T
Q  297 agtttgaggataattaaataaattt 321  Q
    ||||| |||||||||||| ||||||    
T  42274325 agtttaaggataattaaacaaattt 42274301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 44286802 - 44286691
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||        |||||||||| ||||| |||||     
T  44286802 taattcgtttcatgttaaaaaattgtaaattttagtaaatgaatctttcatagtgttctaaatttgtctcaaaaaaatcgttcaaaagtttaagagttta 44286703  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  44286702 aggataattaaa 44286691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 33031087 - 33031165
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaa 107  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||    
T  33031087 aattcaaatttgtttaatttatgtttaaactcttgaatttttaaacaattttttgcagacgtgttaagaacattactaa 33031165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 6457266 - 6457363
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||| ||| |||||| || | ||||||||    
T  6457266 tcaattcaaatttgtttaatttatggttaaactcttgagtttttgaacaattttttgaagacgtgttgagaacattaataaaagctcctctgcaaaaa 6457363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 25100585 - 25100681
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||||||||| | ||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  25100585 tcaattcaaatttgtttaatttat-tgtaatctcttaagtttttgaacaatattttacagacgtgttaagaacattactaaaagttcctctgcaaaaa 25100681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 43932858 - 43932741
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||| |||        ||||||||||||||||     
T  43932858 catatttaattcgtttcatgttaaaaaattctaaattttaataattgaacctttcatattgttctaaacttctctcaaaaaaatcgttcaaaaatttaag 43932759  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  43932758 agtttaaggataattaaa 43932741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 3043656 - 3043573
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaag 110  Q
    ||||||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||| ||| ||||||||||    
T  3043656 tcaattcaaatttgtttaatttatgcttaaactcttgaattattgaacaattttttgcagacgtgttaaaaacattactaaaag 3043573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 33031227 - 33031338
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||        |||||||||||||||| | |||     
T  33031227 taattcgtttcatgttaaaaaaatctaaattttggtaaatgaaccttttatagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaagaattta 33031326  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  33031327 aggataattaaa 33031338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 7439220 - 7439306
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  7439220 tcaattcaattttttttaatttatgcttaaactcttgtgtttttgaacaattttttactgacgtgtcaagaacattactaaaagttc 7439306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 8738104 - 8738022
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| ||| |||| |||||||    
T  8738104 attcaaatttgtttaatttatgcttaaattcttgagtttttgaacaattttatacagacgtgttaaaaacattacgaaaagtt 8738022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 20721511 - 20721425
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  20721511 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 20721425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 43933029 - 43932943
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| || ||||||||  ||||||||||||||| |||||||||||||    
T  43933029 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaataattttttgtagacgtgttaagaacattactaaaagttc 43932943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 8392622 - 8392537
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||||||||||| |||| ||||||||    
T  8392622 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacaaacgtgttaagaatgttattaaaagtt 8392537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 8737935 - 8737814
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||| |||         |||||||||||||||     
T  8737935 catatttaattcgtttcatgttaaaaaaatttaaattttagtaaacgaacctttcatagtgttctaaacttttctaaaaaaaaccgttcaaaaatttaag 8737836  T
Q  297 agtttgaggataattaaataaa 318  Q
    | ||| ||||||||||||||||    
T  8737835 attttaaggataattaaataaa 8737814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 33832247 - 33832131
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||         ||||| ||||||||||     
T  33832247 catatttaattcgtttcat-ttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacttgtcataaaaaaatcgtttaaaaatttaag 33832149  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  33832148 agtttaaggataattaaa 33832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 37593171 - 37593074
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||  ||||||||||  ||||||||||||| | ||||||||    
T  37593171 tcaattcaaatttgtttaatttatgcttaaattcctgagtttttgaacaattttttgcagctgtgttaagaatattactaaaagttcctttgcaaaaa 37593074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 42274596 - 42274499
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||| ||||||||  ||||| ||||| |||||||||||| ||| ||||||||||||| | ||||||||    
T  42274596 tcaattcaaatttgtttaatttatgcttaaactcatgagttttcaaacaaatttttgcagacgtgttaaaaacattactaaaagttcctctgcaaaaa 42274499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 44492883 - 44492968
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||| |||||||||||  ||||||||||||||| ||||||||||||    
T  44492883 tcaattcaaatttgtttaagttatgttgaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 44492968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 36512269 - 36512185
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttaca-gacgtgttaagaacgttactaaaagtt 112  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||  ||||||||||||    
T  36512269 aattctaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcaggacgtgttaagaatattactaaaagtt 36512185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 20719326 - 20719240
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||  |||||||||||   |||||||||||||| |||||||||||||    
T  20719326 tcaattcaaatttgtttaatttatgcttaaactcttaagttttctaacaattttttgttgacgtgttaagaacattactaaaagttc 20719240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 31771316 - 31771402
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||  | ||||||||||||| |||||||||||||    
T  31771316 tcaattcaaatttgtttaattgatgcataaactcttaagtttttgaacaattttttgtaaacgtgttaagaacattactaaaagttc 31771402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 41120914 - 41121012
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagttt 301  Q
    |||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||||||||||||||        |||||||||||||||| |||||    
T  41120914 taattcgtttcatgttaaaaaagtctaaattttggtaaatgaacttttcatagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaagagttt 41121012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 25666209 - 25666282
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||    
T  25666209 catatttaattcgtttcatgttaaaaaaaattaaattttagtaaatgaacctttcatagtgttctaaacttgtc 25666282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 44493055 - 44493172
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||| ||||||||| ||| ||||||||||||| |||| ||||||||| ||||||||||| |||        ||||||||||||||||     
T  44493055 catatttaattcgtttgatgttaaaatattataaattttagtaattgaacctttcatagagttctaaacttatctcaataaaatcgttcaaaaatttaag 44493154  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  44493155 agtttaaggataattaaa 44493172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 314
Target Start/End: Complemental strand, 21439955 - 21439839
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||||||||| ||||||||| | ||||||||| ||| |||| |||||||||||||||||||||||||        || ||||||||||||| |    
T  21439955 atatttaattcgtttcaagttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcattcaaaaatttaaga 21439856  T
Q  298 gtttgaggataattaaa 314  Q
    |||| ||||||||||||    
T  21439855 gtttaaggataattaaa 21439839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 31436045 - 31436124
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  |||||||  |||||||  ||||||||||||    
T  31436045 aaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtactaagaacaatactaaaagttc 31436124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 44286978 - 44286889
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtt---taaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |   ||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||    
T  44286978 tcaattcaaatttgtttaatttataatacttaaactcttgagtttttgaacaattttttgcggacgtgttaagcacattactaaaagttc 44286889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 21440114 - 21440028
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  |  |||||||||||| |||||||||||||    
T  21440114 tcaattcaaatttgtttaatttattcttaaactcttaagtttttaaacaattttttgtaatcgtgttaagaacattactaaaagttc 21440028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 34073696 - 34073622
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||||||||| ||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  34073696 catatttaattcgtttcttgttagaaaattctaaattttattaaatgaatctttcttagtgttctaaacttgtct 34073622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 37593003 - 37592929
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||    
T  37593003 catatttaatccgtttcatgttaaaaaattctaaattttagtaaatgaacttttcatggtgttctaaatttgtct 37592929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 3043485 - 3043368
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||| |||| ||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||        ||||| |||||||||      
T  3043485 catatttaattagttttatgttaaaatattctgaattttagtaaatgaacctttcatattgttctaaacttgtctcaaaaaattcgttaaaaaatttatg 3043386  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  3043385 agtttaaggataattaaa 3043368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 14201088 - 14200971
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||| ||||||||||||||||||||||||||| |||||||| ||||  || |||||||| |||||||        | ||||||||||||||     
T  14201088 catatttaattcatttcatgttaaaaaattctaaattttattaaatgaaccttttgtaatgttctaagcttgtctcagaaaaattgttcaaaaatttaag 14200989  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  14200988 agtttaaggataattaaa 14200971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 42487963 - 42487867
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||  ||| ||||||||||| ||| ||||||||| | ||||||||    
T  42487963 tcaattcaaatttgtttaatttatgcttaaactctt-aattttttaacaattttttgtagatgtgttaagaacattattaaaagttcctctgcaaaaa 42487867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 6457437 - 6457505
Alignment:
Q  197 catatctaattcgtttcatgttaaaa-aattctaaattttagtaaatgaaactttcatagtgttctaaa 264  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  6457437 catatttaattcgtttcatgttaaaaaaattctaagttttagtaaatgaacctttcatagtgttctaaa 6457505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 44879842 - 44879738
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||| ||||||||||  ||||||||  ||||||||||||||||| ||||||        ||||||||||||||||     
T  44879842 catatttaattcgtttcatgttaaaaaaatctaaattttgttaaatgaacttttcatagtgttctaaatttgtcttaaaaaaatcgttcaaaaatttaag 44879743  T
Q  297 agttt 301  Q
    |||||    
T  44879742 agttt 44879738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 44879995 - 44879907
Alignment:
Q  38 ttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||| |||| ||||||||| | ||||||||||||  | ||||||||||    
T  44879995 ttgtttaatttatgcttaaacttttgagtttttaaacaattttttgcagatgtgttaagatcattactaaaagtttatgtgcaaaaatt 44879907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 7655007 - 7654925
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||| | |||||| || || | |||||||| |||||||||    
T  7655007 tcaatttaaatttgtttaatttatggttaaactcttgagtttttgaatagttttttgcaaacatattaagaacattactaaaa 7654925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 33000987 - 33000913
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtc 270  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||    
T  33000987 catatttaattcgtttcatgttaaaaaaattctaaattttagtaattgaacatttcatattgttctaaacttgtc 33000913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 20719949 - 20720033
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| ||||||   | ||||||| ||||| ||||||| ||||||||||||||| |||||||||||||    
T  20719949 tcaattcaaatttgtttaatttatgcttaaac---taagttttttaacaatttttttatagacgtgttaagaacattactaaaagttc 20720033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 23787838 - 23787773
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgt 92  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||    
T  23787838 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgt 23787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 14201260 - 14201177
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||| ||| |||||||||| ||||| |||| ||||||||  || |||||||||||| |||||||||||||    
T  14201260 aattcaaatttgtttaatt-atgcttaaactcttaagtttgtgaataattttttgtagccgtgttaagaacattactaaaagttc 14201177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 20701256 - 20701328
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    ||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||  |||||| ||||||||    
T  20701256 tcaattcaaatttgtttaatttatgcttaaacttttaagttttttaacaattttttgtagacgtattaagaac 20701328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 30784355 - 30784403
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaa 245  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30784355 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaa 30784403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 36512099 - 36512025
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||| |||| |||||| ||||||||||||||||| |||| ||  ||||||||||||||||||||||||    
T  36512099 catatttaatttgttttatgttacaaaattctaaattttagaaaataaacatttcatagtgttctaaacttgtct 36512025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 25100787 - 25100872
Alignment:
Q  228 taaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataattaaa 314  Q
    ||||||||||||| |||| |||||||||||||||||||||||||        |||||||||||||||| ||||| ||||||||||||    
T  25100787 taaattttagtaagtgaacctttcatagtgttctaaacttgtct-caaaaaatcgttcaaaaatttaagagtttaaggataattaaa 25100872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 29809454 - 29809401
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaacttt 250  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  29809454 catatttaattcctttcatgttaaaaaattctaaattttagtaaatgaaccttt 29809401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 21439296 - 21439351
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||    
T  21439296 tcaattcaaatttatttaatttatgcttaaactcttaagttttttaacaatttttt 21439351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 33001150 - 33001071
Alignment:
Q  31 ttcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||| ||||||||||    |||||||| ||||||| |||||||||||  ||||||||||||||| ||||||||||||    
T  33001150 ttcaaatttctttaatttatac--aaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtt 33001071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 18672259 - 18672312
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttt 80  Q
    ||||||||||||||||||||||||| || ||||||| ||||||| |||||||||    
T  18672259 tcaattcaaatttgtttaatttatgcttgaactcttaagttttttaacaatttt 18672312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 4327898 - 4327812
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatg 118  Q
    ||||||||||||||||||||||| ||||||| || || ||||||||||   ||| ||||||| || ||||| ||||||||| ||| ||||    
T  4327898 aattcaaatttgtttaatttatgcttaaactattaagcttttgaacaa---tttgcagacgtatttagaacattactaaaaattcctatg 4327812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 13027735 - 13027657
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||||||||||| ||| |||||| ||| |||||||||||||||||||| | |  |||||||||| |||||| ||||||    
T  13027735 aaatttgtttaatt-atgcttaaacacttaagtttttgaacaattttttatacatttgttaagaacattactataagttc 13027657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 34073865 - 34073782
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| ||||||||||| ||||||  ||||||||||  ||||| ||||||||||| ||||| |||| ||||| |||||||||||||    
T  34073865 tcaatttaaatttgttta-tttatgcctaaactcttg--tttttcaacaattttttgcagacatgtttagaacattactaaaagttc 34073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 40365179 - 40365093
Alignment:
Q  27 tcaattcaaatttgtttaatttatgttt-aaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||||| ||||||||||||||||||||| |||| |||||| ||||| |||||||||| |  |  |||||||||| |||||||||||||    
T  40365179 tcaatttaaatttgtttaatttatgtttaaaacccttgag-ttttggacaattttttgcttatatgttaagaacattactaaaagttc 40365093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 36881197 - 36881315
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    |||||| ||| |||||||||||   ||||||||||| | |||| ||||||||| ||||||||||||||         || ||||||| ||| | |||||     
T  36881197 taattcattttatgttaaaaaaaattaaattttagttattgaacctttcatagcgttctaaacttgtcaaaaaaaaatcattcaaaatttttagagttta 36881296  T
Q  303 aggataattaaataaattt 321  Q
    |||||||||||||||||||    
T  36881297 aggataattaaataaattt 36881315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 10287309 - 10287413
Alignment:
Q  204 aattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttga 303  Q
    ||||| |||||||||||||| | |||| |||||||||||||| ||||  ||||||| |||||||||||        ||||| |||||||||| | |||||    
T  10287309 aattcatttcatgttaaaaagt-ctaagttttagtaaatgaatcttttgtagtgttataaacttgtcttataaaaatcgttaaaaaatttaaaaatttga 10287407  T
Q  304 ggataa 309  Q
    ||||||    
T  10287408 ggataa 10287413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 3118145 - 3118216
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    ||||| |||||  |||||||||||||||||||||| ||||||||| ||| ||||  || ||||||||||||||    
T  3118145 catatttaatttatttcatgttaaaaaattctaaa-tttagtaaacgaaccttttgtaatgttctaaacttgt 3118216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 20720845 - 20720809
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20720845 tcaattcaaatttgttcaatttatgtttaaactcttg 20720809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 42487786 - 42487718
Alignment:
Q  204 aattcgtttcatgttaaaaaat-tctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||||  | ||||||||||||| |||| ||||||||| ||| |||||||||||    
T  42487786 aattcatttcatgttaaaaaaaatttaaattttagtaattgaacctttcatagcgttttaaacttgtct 42487718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 8392449 - 8392382
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaa 264  Q
    ||||| |||||  ||||| |||||||||||||| |||||| |||||||| |||| ||| |||||||||    
T  8392449 catatttaatttatttcacgttaaaaaattctagattttattaaatgaaccttttatattgttctaaa 8392382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 24951214 - 24951284
Alignment:
Q  28 caattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    |||||||||||||||||||| ||| |||||||||  |||||| ||||| | ||||  |||||||||||||||    
T  24951214 caattcaaatttgtttaatt-atgcttaaactctcaagttttcgaacattcttttggagacgtgttaagaac 24951284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 32319068 - 32318997
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| |||||  ||||||||||||||| ||||||| ||||||||||||| ||||  || ||||||||||||    
T  32319068 catatttaatttatttcatgttaaaaaaattctaaaatttagtaaatgaacctttagtaatgttctaaactt 32318997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 36881116 - 36881155
Alignment:
Q  43 taatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  36881116 taatttatgtttaatctcttgagtttttgaataatttttt 36881155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 3117981 - 3118070
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||||||||||| || || |||||||||| || || || |  |||||||||| |||| |||||||| | ||||||||    
T  3117981 aaatttgtttaatt-atgtttaaacttttaagattttgaacaaattattgcacaaatgttaagaacattacgaaaagttcatctgcaaaaa 3118070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 19058752 - 19058702
Alignment:
Q  212 tcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttcta 262  Q
    ||||||||||||||||||||||||| |||||| | |||| ||| |||||||    
T  19058752 tcatgttaaaaaattctaaattttaataaatggatcttttataatgttcta 19058702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 32318223 - 32318311
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttcttatgcaaa 122  Q
    |||||||||||||| ||| ||||||| || || |||||||||| |||||| || | ||||||||||| |||| |||||||| | ||||||    
T  32318223 aaatttgtttaatt-atgcttaaacttttaagattttgaacaatttttttgcacaagtgttaagaacattacgaaaagttcatctgcaaa 32318311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 32319232 - 32319168
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | |||||||||||    
T  32319232 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaac 32319168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 32319809 - 32319745
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaac 99  Q
    |||||||||||||| ||||||||||| ||  | |||||||||||||||| || | |||||||||||    
T  32319809 aaatttgtttaatt-atgtttaaacttttatgattttgaacaattttttgcacaagtgttaagaac 32319745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 3118732 - 3118684
Alignment:
Q  221 aaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgt 269  Q
    |||||||||||||||||||||| || ||||  || ||||||||||||||    
T  3118732 aaaattctaaattttagtaaataaaccttttgtaatgttctaaacttgt 3118684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 9111571 - 9111654
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    |||| |||||||||||||| ||| ||||||| || || ||| |||||| ||||| || | ||||||||||| |||| ||||||||    
T  9111571 aatttaaatttgtttaatt-atgcttaaacttttaagatttagaacaactttttgcacaagtgttaagaacattacgaaaagttc 9111654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 18673107 - 18673071
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  18673107 tcaattcaaatttgttcaatttatgcttaaactcttg 18673071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 20720119 - 20720167
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaa 245  Q
    ||||| |||||| |||||  |||||||||||||||||||||||| ||||    
T  20720119 catatttaattcatttcaaattaaaaaattctaaattttagtaattgaa 20720167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 42487053 - 42487089
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  42487053 tcaattcaaatttgttcaatttatgcttaaactcttg 42487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 44493795 - 44493759
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  44493795 tcaattcaaatttgttcaatttatgcttaaactcttg 44493759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 1331 - 1448
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||        ||||||||||||||||     
T  1331 catatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgcctcaaaaaaatcgttcaaaaatttaag 1430  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  1431 agtttaaggataattaaa 1448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 1159 - 1242
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  1159 aattcaaatttgttttatttatgcttaaactcatgagtttttgaacaattttttgcagacgtgttaagaacattacttaaagtt 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 240136 - 240019
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||        |||||||||||||||||    
T  240136 catatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaagtcgttcaaaaatttaac 240037  T
Q  297 agtttgaggataattaaa 314  Q
    ||||  ||||||||||||    
T  240036 agttgaaggataattaaa 240019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 240294 - 240208
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||| ||||||||||| |||||||||||||    
T  240294 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttttagatgtgttaagaacattactaaaagttc 240208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 239492 - 239561
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaag 96  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||| ||||||||    
T  239492 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 239561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 21868 - 21757
Alignment:
Q  203 taattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttg 302  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||        |||||||||||||||| |||||     
T  21868 taattcgtttcatgttagaaaattctaaattttagtaaatgaaccttttatagtgttctaaacttgtctcgaaaaaatcgttcaaaaatttaaaagttta 21769  T
Q  303 aggataattaaa 314  Q
    ||||||||||||    
T  21768 aggataattaaa 21757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 6470 - 6384
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  6470 tcaattcaaatttgtttaatttatgcttaaactcttgagtttttcaacaattttttggagacgtgttaagaacattactaaaagttc 6384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 6285 - 6227
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttg 268  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6285 tttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttg 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 486 - 389
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||||||  ||||||||||||||| ||||||||||||| | ||||||||    
T  486 tcaattcaaatttgtttaatttatgcttaaacacatgagtttttgaacaattttttggagacgtgttaagaacattactaaaagttcctctgcaaaaa 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 313 - 209
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataa 309  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||        |||||||||||||||| ||||| |||||||    
T  313 tttcattttaaaaaattctaaattttagtaaatgaacctttcgtagtgttctgaacttgtctcgaaaaaatcgttcaaaaatttaagagtttaaggataa 214  T
Q  310 ttaaa 314  Q
    |||||    
T  213 ttaaa 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 66; Significance: 4e-29; HSPs: 6)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 25181 - 25064
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||        ||||||||||||||||     
T  25181 catatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 25082  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| | ||||||||||    
T  25081 agtttaacgataattaaa 25064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 25339 - 25253
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  25339 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 25253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 23164 - 23078
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||  |||||||||||   |||||||||||||| |||||||||||||    
T  23164 tcaattcaaatttgtttaatttatgcttaaactcttaagttttctaacaattttttgttgacgtgttaagaacattactaaaagttc 23078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 23787 - 23871
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaa-ttttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| ||||||   | ||||||| ||||| ||||||| ||||||||||||||| |||||||||||||    
T  23787 tcaattcaaatttgtttaatttatgcttaaac---taagttttttaacaatttttttatagacgtgttaagaacattactaaaagttc 23871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 24683 - 24647
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24683 tcaattcaaatttgttcaatttatgtttaaactcttg 24647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 23957 - 24005
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaa 245  Q
    ||||| |||||| |||||  |||||||||||||||||||||||| ||||    
T  23957 catatttaattcatttcaaattaaaaaattctaaattttagtaattgaa 24005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 8430 - 8534
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| || ||| ||| || |||||||||| | |||| |||||    
T  8430 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgtagacatggtaacaacattgctaaaagttcatctgcacaaatt 8529  T
Q  127 gtcgc 131  Q
    |||||    
T  8530 gtcgc 8534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 8623 - 8690
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaac-tttcatagtgttctaa 263  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  8623 catatttaattcgtttcatcttaaaaaattctaaattttagtaaatgaaccttttcatagtgttctaa 8690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 7192 - 7098
Alignment:
Q  30 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| | ||||||||    
T  7192 attcaaatttgtttaatgtatgcttatactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttcatctgcaaaaa 7098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 7002 - 6951
Alignment:
Q  220 aaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  7002 aaaaattctaaattttagttaataaacctttcatagtgttctaaacttgtct 6951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 158151 - 158077
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  158151 catatttaattcgtttcatggtaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtct 158077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 17669 - 17585
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  17669 aattcaaatttgtttaatttatagttaaactcttaagtttttgaacaattttttgtagacgtgttaagaacattactaaaagttc 17585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 17500 - 17384
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||||||||||||||        || |||||||||||||     
T  17500 catatttaattcgtttcatgttaaaaa-ttctaaattttagtaaatgaatctatcatggtgttctaaacttgtctcaaaaaaatctttcaaaaatttaag 17402  T
Q  297 agtttgaggataattaaa 314  Q
    ||||| ||||||||||||    
T  17401 agtttaaggataattaaa 17384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 6204 - 6303
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaatt 126  Q
    ||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||| || || |||||||||||||||||||||||| |  |||||||||    
T  6204 tcaattcaaatatgtttaatttatgcttaaacttttaagtttttgaacaattttttgcaaacatgttaagaacgttactaaaagttcctcagcaaaaatt 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 6987 - 6869
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaa-ttctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaa 295  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||        ||||||| ||||||||    
T  6987 catatttaatttgtttcatgttaaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcagaaatttaa 6888  T
Q  296 cagtttgaggataattaaa 314  Q
     ||||| ||||||||||||    
T  6887 gagtttaaggataattaaa 6869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 7151 - 7061
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||| | ||||||||    
T  7151 aaatttgtttaatttatgcttaaactcttgagttttttaacaattttttgtagacgtgttaaaaacattactaaaagttcctctgcaaaaa 7061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 5819 - 5855
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttg 63  Q
    |||||||||||||||| |||||||| |||||||||||    
T  5819 tcaattcaaatttgttcaatttatgcttaaactcttg 5855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 4188 - 4106
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaa 109  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||    
T  4188 tcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacatgttaagaacgttattaaaa 4106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 313
Target Start/End: Complemental strand, 4016 - 3900
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaac 296  Q
    ||||| |||||  ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| |        ||||| ||||||||||     
T  4016 catatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaag 3917  T
Q  297 agtttgaggataattaa 313  Q
    ||||| |||||||||||    
T  3916 agtttaaggataattaa 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 35273 - 35359
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||||| ||| |||||||||    
T  35273 tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattagtaaaagttc 35359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 35445 - 35561
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| |  ||||||||||| |        |||||||||||||||| |    
T  35445 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcataataatctaaacttgtttcaaaaaaatcgttcaaaaatttaaga 35544  T
Q  298 gtttgaggataattaaa 314  Q
     ||| ||||||||||||    
T  35545 ctttaaggataattaaa 35561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 38674 - 38609
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgt 92  Q
    ||||||||||||||||||||||||| || ||||||| ||||||| |||||||||||  ||||||||    
T  38674 tcaattcaaatttgtttaatttatgcttgaactcttaagttttttaacaattttttgtagacgtgt 38609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 49053 - 48967
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||||    
T  49053 tcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 48967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 3436 - 3359
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaatt-ttttacagacgtgttaagaacgttactaaaag 110  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  3436 aaatttgtttaatttatgcttaaactcttaagtttttcaacaatttttttacagacgtgttaagaacgttattaaaag 3359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 2962 - 2858
Alignment:
Q  210 tttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaacagtttgaggataa 309  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||||| |||||||||| |        ||||| |||||||||| ||||| | |||||    
T  2962 tttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgtgctaaacttgtataaaaagaatcgttaaaaaatttaagagtttaacgataa 2863  T
Q  310 ttaaa 314  Q
    |||||    
T  2862 ttaaa 2858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 10245 - 10159
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttc 113  Q
    ||||||||||||||||||||||||  |||||||||| |||||||  ||||||||||  ||||||||||||||| ||| |||||||||    
T  10245 tcaattcaaatttgtttaatttattcttaaactcttaagtttttttacaattttttgtagacgtgttaagaacattattaaaagttc 10159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 10087 - 10011
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattc--taaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||||||||||||||||||||     ||||||||| ||| |||| |||||||||||||||||||||||||    
T  10087 catatttaattcgtttcatgttaaaaaaaaaattaaattttattaattgaacctttcatagtgttctaaacttgtct 10011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 9424 - 9491
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaa 95  Q
    ||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||  ||| |||||||    
T  9424 tcaattcaaatttgtttaatttatgcttaaact-ttaagttttttaacaattttttgtagatgtgttaa 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 7103 - 7177
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtct 271  Q
    ||||| ||||| ||||| ||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  7103 catatttaatttgtttcgtgttagaaaattctaaattttagtaaatgaacttttcatattgttctaaacttgtct 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 6931 - 7016
Alignment:
Q  27 tcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagtt 112  Q
    ||||||||||||||||||||||||| ||||| |||| | ||||| || | |||||| | | | |||| ||||| ||||||||||||    
T  6931 tcaattcaaatttgtttaatttatgcttaaattcttaaattttttaatagttttttgctggcatgtttagaacattactaaaagtt 7016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 52520 - 52590
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaactt 267  Q
    ||||| |||||| ||||| ||||||||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  52520 catatttaattcatttcaagttaaaaaaatctaaattttagtaaatgaaccttttataatgttctaaactt 52590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 47974 - 47860
Alignment:
Q  198 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaactttcatagtgttctaaacttgtctnnnnnnnntcgttcaaaaatttaaca 297  Q
    |||| |||||| |||||||||||||||||||||||||||| ||| ||| || |  || ||||||||||||||||        | |||||||||||||| |    
T  47974 atatttaattcatttcatgttaaaaaattctaaattttagaaaacgaacctcttgtaatgttctaaacttgtctcaagaaaattgttcaaaaatttaaga 47875  T
Q  298 gtttgaggataatta 312  Q
    |||| ||||||||||    
T  47874 gtttaaggataatta 47860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 282940 - 283029
Alignment:
Q  34 aaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttactaaaagttcttatgcaaaaa 124  Q
    |||||||||||||| ||| ||||||| || || |||||||||||||||| || | ||||||||||| |||| |||||||| | ||||||||    
T  282940 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaa 283029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 283361 - 283308
Alignment:
Q  197 catatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaaacttt 250  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| ||| ||||    
T  283361 catatttaatttatttcatgttaaaaaattctaaattttagtaaacgaaccttt 283308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 25066 - 25014
Alignment:
Q  29 aattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttt 82  Q
    ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||    
T  25066 aattcaaatttgtttaatt-atgtttaaactcttaaatttttgaataatttttt 25014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University