View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15605_high_39 (Length: 312)

Name: NF15605_high_39
Description: NF15605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15605_high_39
NF15605_high_39
[»] chr3 (14 HSPs)
chr3 (129-283)||(8647478-8647631)
chr3 (1-101)||(51976761-51976862)
chr3 (1-101)||(36684906-36685007)
chr3 (1-101)||(8705713-8705814)
chr3 (1-101)||(9057600-9057701)
chr3 (1-101)||(45736467-45736568)
chr3 (14-101)||(4978436-4978524)
chr3 (25-91)||(38998918-38998984)
chr3 (25-84)||(37796623-37796682)
chr3 (1-82)||(47165354-47165436)
chr3 (35-94)||(20916417-20916476)
chr3 (35-94)||(20925379-20925438)
chr3 (29-101)||(49758956-49759028)
chr3 (34-91)||(32073607-32073664)
[»] chr5 (6 HSPs)
chr5 (1-101)||(41197365-41197466)
chr5 (1-101)||(30376436-30376537)
chr5 (4-94)||(36779415-36779505)
chr5 (1-94)||(29985436-29985530)
chr5 (1-94)||(34905583-34905677)
chr5 (1-43)||(12378617-12378660)
[»] chr2 (4 HSPs)
chr2 (1-101)||(29894330-29894431)
chr2 (1-99)||(36365043-36365142)
chr2 (1-101)||(24543214-24543315)
chr2 (42-94)||(12555410-12555462)
[»] chr1 (14 HSPs)
chr1 (1-101)||(11351606-11351707)
chr1 (1-101)||(21515206-21515305)
chr1 (1-94)||(2536491-2536585)
chr1 (1-99)||(6784281-6784380)
chr1 (1-94)||(44839866-44839960)
chr1 (33-101)||(20639591-20639659)
chr1 (35-94)||(3601265-3601324)
chr1 (25-91)||(51080706-51080772)
chr1 (11-94)||(39648376-39648460)
chr1 (35-94)||(2114364-2114423)
chr1 (34-91)||(26418788-26418845)
chr1 (34-91)||(32108435-32108492)
chr1 (35-94)||(17321883-17321942)
chr1 (1-72)||(32988895-32988965)
[»] chr4 (11 HSPs)
chr4 (1-93)||(43989267-43989360)
chr4 (6-94)||(1394133-1394223)
chr4 (36-94)||(19315935-19315993)
chr4 (10-84)||(43813189-43813264)
chr4 (55-101)||(5124644-5124690)
chr4 (34-91)||(13200849-13200906)
chr4 (34-91)||(47783000-47783057)
chr4 (35-94)||(9633066-9633125)
chr4 (35-94)||(35096916-35096975)
chr4 (37-89)||(1311155-1311207)
chr4 (62-94)||(17283592-17283624)
[»] chr6 (5 HSPs)
chr6 (1-94)||(4513080-4513174)
chr6 (1-101)||(942694-942795)
chr6 (25-91)||(19047098-19047164)
chr6 (34-91)||(15950809-15950866)
chr6 (27-91)||(13757537-13757601)
[»] chr8 (3 HSPs)
chr8 (1-101)||(18481234-18481335)
chr8 (5-93)||(26440815-26440904)
chr8 (11-94)||(7251114-7251198)
[»] chr7 (8 HSPs)
chr7 (1-101)||(23820524-23820625)
chr7 (1-94)||(21118403-21118496)
chr7 (12-78)||(24808788-24808855)
chr7 (7-94)||(40901820-40901908)
chr7 (35-93)||(20492489-20492547)
chr7 (34-91)||(29526837-29526894)
chr7 (35-91)||(10325110-10325166)
chr7 (42-94)||(12980738-12980790)
[»] scaffold0041 (1 HSPs)
scaffold0041 (7-94)||(48110-48198)


Alignment Details
Target: chr3 (Bit Score: 114; Significance: 8e-58; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 8647631 - 8647478
Alignment:
Q  129 ggttcttttaaatgttaacactaaattgtgatttgtgaatataacaagttttaaacnnnnnnnnccatatacaacaaatattggaaaataaaacgactta 228  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  8647631 ggttcttttaaatgttaacactaaattgtgaattgtgaatataacaagttttaaacttttttt-ccatatacaacaaatattggaaaataaaacgactta 8647533  T
Q  229 taataaaatacagaaggagtagcttctagtgtcctaacttaaatgtgtaaaatac 283  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  8647532 taataaaatacggaaggagtagcttctagtgtcccaacttaaatgtgtaaaatac 8647478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 51976862 - 51976761
Alignment:
Q  1 taaacgtgggagctagcatgagatgg-gctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||    
T  51976862 taaacgtgggagctagcatgagatggagctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcggcatgagagttctgaaaat 51976763  T
Q  100 ta 101  Q
    ||    
T  51976762 ta 51976761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 36685007 - 36684906
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||    
T  36685007 taaacgtgagagctagcatgagatggggctaccctagctaattcatgagcgaccccattagcttgcctcctattgaactcgacatgagagttctgaaaat 36684908  T
Q  100 ta 101  Q
    ||    
T  36684907 ta 36684906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8705814 - 8705713
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  8705814 taaacgtgggagctagtatgagatggggctaccctaactaattcataagcgacctcattagcttgcctcctattgaactcgacatgagagttctgaaaat 8705715  T
Q  100 ta 101  Q
    ||    
T  8705714 ta 8705713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9057701 - 9057600
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    |||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  9057701 taaacgtgggagctagtatgagatggggctaccctaactaattcataagcgacctcattagcttgcctcctattgaactcgacatgagagttctgaaaat 9057602  T
Q  100 ta 101  Q
    ||    
T  9057601 ta 9057600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45736568 - 45736467
Alignment:
Q  1 taaacgtgggagctagcatgagatg-ggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    |||||||||||| |||||||||||| |||||||||||||||||   |||||  | ||||||  |||||||||||||||||||||| ||||||||| ||||    
T  45736568 taaacgtgggagttagcatgagatgaggctaccctagctaatttacgagcgttcccattggtctgcctcctattgaactcgacatgagagttctgaaaat 45736469  T
Q  100 ta 101  Q
    ||    
T  45736468 ta 45736467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 4978436 - 4978524
Alignment:
Q  14 tagcatgagatg-ggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaatta 101  Q
    |||||||||||| |||||| ||||||||||| ||| |||||||||||||||| ||| |||| |||||||||| ||||||||| ||||||    
T  4978436 tagcatgagatgtggctacgctagctaattcatgaacgacctcattggcttgtctcatattaaactcgacatgagagttctgaaaatta 4978524  T

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Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 38998984 - 38998918
Alignment:
Q  25 gggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||    
T  38998984 gggctaccctcgctaattcgtgagcgaccccattagcttgcctcctattaaactcgacatgagagtt 38998918  T

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Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 37796682 - 37796623
Alignment:
Q  25 gggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacat 84  Q
    |||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  37796682 gggctaccctcgctaatttgtgagcgacctcattagcttgcctcctattaaactcgacat 37796623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47165354 - 47165436
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgac 82  Q
    ||||||||||||||||||||||||||| || || |  |||||||  |||||||| ||||| ||||||||||||||||||||||    
T  47165354 taaacgtgggagctagcatgagatggggctgcctttcctaattcacgagcgaccccattgacttgcctcctattgaactcgac 47165436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 20916476 - 20916417
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  20916476 agctaactcgggagcgacctcattcgcttgcctcctattgaactcaacataagagttctg 20916417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 20925438 - 20925379
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  20925438 agctaactcgggagcgacctcattcgcttgcctcctattgaactcaacataagagttctg 20925379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 49758956 - 49759028
Alignment:
Q  29 taccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaatta 101  Q
    ||||||||  ||||| ||||||| | |||| |||||||||||||||||| |||||| ||||||||| ||||||    
T  49758956 taccctagtcaattcatgagcgatcccattagcttgcctcctattgaacccgacataagagttctgaaaatta 49759028  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 32073607 - 32073664
Alignment:
Q  34 tagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| ||||| |||||||| |||||||||||| | |||||||||| ||||||    
T  32073607 tagctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 32073664  T

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Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41197365 - 41197466
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  41197365 taaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacataagagttctgaaaat 41197464  T
Q  100 ta 101  Q
    ||    
T  41197465 ta 41197466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30376436 - 30376537
Alignment:
Q  1 taaacgtgggagctagcatgagatg-ggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||| || ||||    
T  30376436 taaacgttggagctagcatgagatgaggctaccgtagctaattcatgagcgaccctattggcttgcctcctattgaactcgacataagagttttgaaaat 30376535  T
Q  100 ta 101  Q
    ||    
T  30376536 ta 30376537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 36779415 - 36779505
Alignment:
Q  4 acgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||||||||| ||| ||||||| |||||||||||||| | |||| |||   ||||||||||||||||||| ||||||||| |||||||||    
T  36779415 acgtgggagctaacat-agatgggactaccctagctaatccatgagtgacactattggcttgcctcctattgtactcgacatgagagttctg 36779505  T

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Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 29985530 - 29985436
Alignment:
Q  1 taaacgtgggagctagcatgagat-gggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||| |||||||||| |||||  | ||||||||  |||||| |||||| |||||||||| ||||| || |||||||||||||||| |||||||||    
T  29985530 taaatgtgggagctaacatgacctagggctacctgagctaactcgtgaacgacctcattagcttgtcttctattgaactcgacatgagagttctg 29985436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34905677 - 34905583
Alignment:
Q  1 taaacgtgggagctagcatgagat-gggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    ||||| |||||| ||||||||||| |||||||    |||||||| |||||||||||||||| ||| |||||||||||||| |||  |||||||||    
T  34905677 taaacttgggagttagcatgagatcgggctacttgggctaattcatgagcgacctcattggtttgtctcctattgaactcaacacaagagttctg 34905583  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12378617 - 12378660
Alignment:
Q  1 taaacgtgggagctagcatgagat-gggctaccctagctaattc 43  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  12378617 taaacgtgggagctagcatgagatggggctaccctagctaattc 12378660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29894330 - 29894431
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  29894330 taaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacatgagagttctgaaaat 29894429  T
Q  100 ta 101  Q
    ||    
T  29894430 ta 29894431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36365142 - 36365043
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  36365142 taaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgacctcattggcttgcctcctattgaactcgacatgggagttctgaaaat 36365043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24543315 - 24543214
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||||| ||||    
T  24543315 taaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcatcctattgaactcgacatgagagttctgaaaat 24543216  T
Q  100 ta 101  Q
    ||    
T  24543215 ta 24543214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 12555410 - 12555462
Alignment:
Q  42 tcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||| ||||||| ||||  |||||||||||||||||| ||||| |||||||||    
T  12555410 tcgtaagcgaccccattaacttgcctcctattgaacttgacatgagagttctg 12555462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11351606 - 11351707
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  11351606 taaacgtggaagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacatgagagttctgaaaat 11351705  T
Q  100 ta 101  Q
    ||    
T  11351706 ta 11351707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21515305 - 21515206
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||    
T  21515305 taaacgtgggagctagcatgagatggggctaccctagctaattcatgagcgaccccattggcttgcctcctattgaactcgacat--gagttctgaaaat 21515208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2536491 - 2536585
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  2536491 taaacatgggagctagcatgagatggggctaccctaactaattcatgagcgaccccattggcttgcctcctattgaactcgacatgagagttctg 2536585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6784380 - 6784281
Alignment:
Q  1 taaacgtgggagctagcatgagatgg-gctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  6784380 taaacgtggaagctagtatgagatggagctaccctagttaattcataagcgaccccattggcttgcctcctattgaactcgacatgagagttctgaaaat 6784281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44839866 - 44839960
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| || ||||||||| ||||  |||||||||||||||||||||||| |||||||||    
T  44839866 taaacgtaggagctagcattagatggggctaccctagctaactcatgagcgaccccattaacttgcctcctattgaactcgacatgagagttctg 44839960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 20639659 - 20639591
Alignment:
Q  33 ctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaatta 101  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  20639659 ctagctaattcatgagtgacctcattggcttgcctcctattgaactcaacatgagagttctgaaaatta 20639591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 3601265 - 3601324
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  3601265 agctaactcgtgagcaacctcattcgcttgcctcctattgaactcgacatgagagttctg 3601324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 51080706 - 51080772
Alignment:
Q  25 gggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| |||||||| ||||||||| |||| | |||||||||||| |||||||||| ||||||    
T  51080706 gggctaccctcgctaattcatgagcgaccccattagattgcctcctattaaactcgacatgagagtt 51080772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 39648376 - 39648460
Alignment:
Q  11 agctagcatgagat-gggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||||||||||| ||||||||  ||||||||| |||||||||| ||| ||||| || ||||| |||||||||  |||||||||    
T  39648376 agctagcatgagatggggctacctgagctaattcatgagcgacctaattagcttgacttctattaaactcgacacgagagttctg 39648460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 2114423 - 2114364
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    ||||||||||||||||||| |||| |||| | |||| ||||||||||||| |||||||||    
T  2114423 agctaattcgtgagcgaccccattcgcttccttcctgttgaactcgacatgagagttctg 2114364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 26418788 - 26418845
Alignment:
Q  34 tagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| ||||| |||||||| |||||||||||| | |||||||||| ||||||    
T  26418788 tagctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 26418845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 32108492 - 32108435
Alignment:
Q  34 tagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| ||||| |||||||| |||||||||||| | |||||||||| ||||||    
T  32108492 tagctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 32108435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 17321942 - 17321883
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||| |||||||| |||  ||| ||||||||||| ||||||||||||| |||||||||    
T  17321942 agctaactcgtgagctaccctatttgcttgcctcctgttgaactcgacatgagagttctg 17321883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32988895 - 32988965
Alignment:
Q  1 taaacgtgggagctagcatgagat-gggctaccctagctaattcgtgagcgacctcattggcttgcctcctat 72  Q
    |||||| || |||||||||||||| ||||||||||| ||||||| |||||||    |||||||||||||||||    
T  32988895 taaacgcggaagctagcatgagatggggctaccctaactaattcatgagcga--aaattggcttgcctcctat 32988965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43989267 - 43989360
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttct 93  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |||||    
T  43989267 taaacgtgggagctagcatgagatggggctaccctaactaattcatgagcgacctcattggcttgcctcctattgaactcgacatgagcgttct 43989360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 1394223 - 1394133
Alignment:
Q  6 gtgggagctagcatgagatggg--ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||||||||||| |||||||  ||||    |||||||| ||| ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  1394223 gtgggagctagcattagatggggactacttgtgctaattcatgaacgaccccattagcttgcctcctattgaactcgacatgagagttctg 1394133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 19315935 - 19315993
Alignment:
Q  36 gctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||||| ||| ||||  |||||||||||||||||||||||||||||| |||||||||    
T  19315935 gctaattcatgaacgactccattggcttgcctcctattgaactcgacatgagagttctg 19315993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 43813189 - 43813264
Alignment:
Q  10 gagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacat 84  Q
    ||||||| |||||||||| |||||||| ||||||| ||| ||||| ||||| |||| || ||||||||||||||||    
T  43813189 gagctagtatgagatggggctaccctaactaattcatgaacgaccccattgacttgtctgctattgaactcgacat 43813264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 5124644 - 5124690
Alignment:
Q  55 cattggcttgcctcctattgaactcgacattagagttctggaaatta 101  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||||    
T  5124644 cattagcttgcctccgattgaactcgacattagagttctgaaaatta 5124690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 13200906 - 13200849
Alignment:
Q  34 tagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    ||||||| || ||||| |||||||| |||||||||||| |||||||||||| ||||||    
T  13200906 tagctaactcatgagcaacctcatttgcttgcctcctaatgaactcgacatgagagtt 13200849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 47783057 - 47783000
Alignment:
Q  34 tagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| ||||| |||||||| |||||||||||| | |||||||||| ||||||    
T  47783057 tagctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 47783000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 9633125 - 9633066
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||| |||| | ||||| ||||  |||||||||||||||||||||||| |||||||||    
T  9633125 agctaactcgtaatcgaccccattcacttgcctcctattgaactcgacatgagagttctg 9633066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 35096975 - 35096916
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||| |||||||| |||  ||| |||||||| |||||||||||||||| |||||||||    
T  35096975 agctaactcgtgagcaaccctatttgcttgccttctattgaactcgacatgagagttctg 35096916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 1311207 - 1311155
Alignment:
Q  37 ctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagag 89  Q
    |||| |||||||||||||||||| ||| ||||||||| ||||| |||| ||||    
T  1311207 ctaactcgtgagcgacctcattgacttacctcctattaaactcaacatgagag 1311155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 17283592 - 17283624
Alignment:
Q  62 ttgcctcctattgaactcgacattagagttctg 94  Q
    ||||||||||||||||||||||| |||||||||    
T  17283592 ttgcctcctattgaactcgacataagagttctg 17283624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4513174 - 4513080
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    ||||| |||||||||| |||||||||| |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  4513174 taaacatgggagctagtatgagatggggctaccctagctaattcattagcgaccccattggcttgcctcctattgaactcgacatgagagttctg 4513080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 942795 - 942694
Alignment:
Q  1 taaacgtgggagctagcatgagatgggctac-cctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    |||||||||||| |||||||||||||| |   ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  942795 taaacgtgggagatagcatgagatggggttgtcctagctaattcacgagcgaccccattggcttgcctcctattgaactcgacattagagttctgaaaat 942696  T
Q  100 ta 101  Q
    ||    
T  942695 ta 942694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 19047164 - 19047098
Alignment:
Q  25 gggctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||    
T  19047164 gggctaccctcgctaattcgtgagcgaccacattagcttgcctcctattaaactcgacatgagagtt 19047098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 15950866 - 15950809
Alignment:
Q  34 tagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| ||||| |||||||| |||||||||||| | |||||||||| ||||||    
T  15950866 tagctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 15950809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 13757537 - 13757601
Alignment:
Q  27 gctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||| ||||||||||||||||||||||||||| | |||| || |||| ||||| |||| ||||||    
T  13757537 gctatcctagctaattcgtgagcgacctcattagtttgcttcttattaaactcaacatgagagtt 13757601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18481335 - 18481234
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||| |||| ||||| ||| |||||||||||||||||||| ||||||||| ||||    
T  18481335 taaacgtgggagctagcatgagatggggctaccctagctaatttatgagtgaccccattgacttacctcctattgaactcgacatgagagttctgaaaat 18481236  T
Q  100 ta 101  Q
    ||    
T  18481235 ta 18481234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 26440904 - 26440815
Alignment:
Q  5 cgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttct 93  Q
    |||| |||||||||| ||||||| ||||||||||||| || ||||| ||| |||| ||||||||||||||||||||||||| ||||||||    
T  26440904 cgtgagagctagcattagatggggctaccctagctaactcatgagcaaccccattagcttgcctcctattgaactcgacatgagagttct 26440815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 7251198 - 7251114
Alignment:
Q  11 agctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    ||||||||||||||||| ||||| ||| |||| | |||| || | |||||| ||||||||||||||||||||||| |||||||||    
T  7251198 agctagcatgagatggggctaccttagttaatgcatgagtgatcccattggtttgcctcctattgaactcgacataagagttctg 7251114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23820625 - 23820524
Alignment:
Q  1 taaacgtgggagctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctggaaat 99  Q
    |||| |||||||||||||||||||||  |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||| ||||    
T  23820625 taaatgtgggagctagcatgagatggatctaccctatctaattcatgagcgaccccattggcttgcctcctattgaactcgatatgagagttctgaaaat 23820526  T
Q  100 ta 101  Q
    ||    
T  23820525 ta 23820524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21118496 - 21118403
Alignment:
Q  1 taaacgtgggagctagcatgagatgg-gctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    ||||||| ||||||||||  |||||| ||||||||||||||  | |||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  21118496 taaacgttggagctagcaatagatggtgctaccctagctaac-catgagtgacctcattagcttgcctcctattgaactcgacatgagagttctg 21118403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 24808788 - 24808855
Alignment:
Q  12 gctagcatgagatggg-ctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaact 78  Q
    |||||||||||||||| ||| |||||||||||| |||| | || ||||||||||||||||||||||||    
T  24808788 gctagcatgagatggggctatcctagctaattcatgagtggccccattggcttgcctcctattgaact 24808855  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 40901820 - 40901908
Alignment:
Q  7 tgggagctagcatgagatgg-gctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||||||||||||||||| ||||||   | |||||| |||||||||  ||| | |||||||||||| |||||||||| |||||||||    
T  40901820 tgggagctagcatgagatggagctacctgtgttaattcatgagcgaccatattagtttgcctcctattcaactcgacatgagagttctg 40901908  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 20492547 - 20492489
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttct 93  Q
    |||||||||||||||||||  ||| |||||||||||||| ||||||| || ||||||||    
T  20492547 agctaattcgtgagcgaccctattcgcttgcctcctattaaactcgagatgagagttct 20492489  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 29526894 - 29526837
Alignment:
Q  34 tagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||||||| ||||| |||||||| |||||||||||| | |||||||||| ||||||    
T  29526894 tagctaattcatgagcaacctcatttgcttgcctcctagtaaactcgacatgagagtt 29526837  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 10325110 - 10325166
Alignment:
Q  35 agctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagtt 91  Q
    |||||| || |||||||||||||| | |||||||||||| |||||||||| ||||||    
T  10325110 agctaactcatgagcgacctcattcgtttgcctcctattaaactcgacatgagagtt 10325166  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 12980790 - 12980738
Alignment:
Q  42 tcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||||||||| |||| | ||||||||| ||||||||||||| |||||||||    
T  12980790 tcgtgagcgaccccattcgtttgcctcctgttgaactcgacatgagagttctg 12980738  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 48198 - 48110
Alignment:
Q  7 tgggagctagcatgagatgg-gctaccctagctaattcgtgagcgacctcattggcttgcctcctattgaactcgacattagagttctg 94  Q
    |||||||||||||||||||| ||||||   | |||||| |||||||||  ||| | |||||||||||| |||||||||| |||||||||    
T  48198 tgggagctagcatgagatggagctacctgtgttaattcatgagcgaccatattagtttgcctcctattcaactcgacatgagagttctg 48110  T

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