View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15611_high_15 (Length: 384)
Name: NF15611_high_15
Description: NF15611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15611_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 5941682 - 5942008
Alignment:
| Q |
36 |
accatgacattgattaataaaataatttgaatgattaaggcaggtgaggattaaataagagaaaattgagaacagaaacaagagaaaattaactcattac |
135 |
Q |
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| T |
5941682 |
accataacattgattaataaaataatttgaatgattaaggcaggtgaggattaaataagagaaaattgagaacagaaataagagaaaattaactcattac |
5941781 |
T |
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| Q |
136 |
aacaacttcttatttatgttaccctaatatacaaaggaaaagataattcgtccggtacaatacattataacatcaataaaaattgtttataacactgtct |
235 |
Q |
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| T |
5941782 |
aacaactccttatttatgttaccctaatatacaaaggaaaagataattcgtccggtacaatacattataacatcaataaaaattgtttataacactgtct |
5941881 |
T |
|
| Q |
236 |
ccaaaatattaaattgaccatacaataatagtggaccaacattgataggttacatttcttgtagttttgtacatattaaaactaacattagctttaatgt |
335 |
Q |
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| T |
5941882 |
ccaaaatattaaattgaccatacaataatagtggaccaacattgataggttacatttcttgtagttttgtacatattaaaaccaacattagctttaatgt |
5941981 |
T |
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| Q |
336 |
acaccactttatttgaaactgatgatg |
362 |
Q |
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| T |
5941982 |
acaccactttatttgaaactgatgatg |
5942008 |
T |
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