View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15618_low_9 (Length: 258)
Name: NF15618_low_9
Description: NF15618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15618_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 42559382 - 42559150
Alignment:
| Q |
10 |
catcatcatcatccacagacactactttctcctttcttacatctcacactcctttcatcaaaatcgagtctcacaacatcaatgtcacttccaacattct |
109 |
Q |
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| T |
42559382 |
catcatcatcatccacagacactactttctcctttcttacatctcacactcctttcatcaaaatcgagtctcacaacatcaatgtcacttccaacattct |
42559283 |
T |
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| Q |
110 |
tgcnnnnnnnnnnnncgacactgtttctatttcaccgttgcaacaaatcatggaacatgaactgaaccgtaacacatggcaagatcgtaccggtattgat |
209 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42559282 |
tgcaaaaaacaaaaacgacactgtttctatttcaccgttgcaacaaatcatggaacatgaactgaaccgtaacacatggcaagatcgtaccggtattgat |
42559183 |
T |
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| Q |
210 |
actgacatgtttgttgctagcatttatgctatg |
242 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
42559182 |
actgacatgtttgttgctagcatttatgctatg |
42559150 |
T |
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