View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1561_low_1 (Length: 782)
Name: NF1561_low_1
Description: NF1561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1561_low_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 564; Significance: 0; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 564; E-Value: 0
Query Start/End: Original strand, 17 - 774
Target Start/End: Original strand, 15429856 - 15430610
Alignment:
| Q |
17 |
actttacctaaagtgtcatcttcaattggtcatttgaagagtttaaggtatttggatctttctcatggtcaatttgaaactcttccagaatccatatgta |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
15429856 |
actttacctaaagtgtcatcttcaattggtcatttgaagagtttaaggtatttggatctttctcatggtcaatttgaaactcttccaaaatccatatgta |
15429955 |
T |
|
| Q |
117 |
aattgtggaatttacaaattttaaaattagactattgttttagcctacaaaaattgcctaataatttgatgcacttgaaagctctacaacatctatcctt |
216 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15429956 |
agttgtggaatttacaaattttaaaattagactattgttttagcttacaaaaattgcctaataatttgatacacttgaaagctctacaacatctatcctt |
15430055 |
T |
|
| Q |
217 |
aaaaaactgccgcgagctatcaagtttacctcatcaaataggggagttgacttccttgaagactttgagcatgtatgtagttggaaggaaaagagagttc |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15430056 |
aaaaaactgccgcgagctatcaagtttacctcatcaaatagggaagttgacttccttgaagactttgagcatgtatgtagttggaaggaaaagagggttc |
15430155 |
T |
|
| Q |
317 |
cttttggaagaattaggacaattcaatttcaaattagaccagtttcacattaagcaccttgagagagtgaaaagtgtagaagatgctaaagaagccaaca |
416 |
Q |
| |
|
||||||| ||||||||||||||| ||| | ||| || || || |||| || ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15430156 |
cttttggcagaattaggacaattaaatcttaaaggag---agctttacatcaaacaccttgagagagtgaaaagtgtagaagaggctaaagaagccaaca |
15430252 |
T |
|
| Q |
417 |
tgttgagtaagcacgtgaacaatttgcggttgacgtgggatgaagagtcccaattgcaagaaaatgtggtgcagattcttgaagtgcttcaaccttttgt |
516 |
Q |
| |
|
||||||||||||||||||| |||||| ||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| | | |
|
|
| T |
15430253 |
tgttgagtaagcacgtgaataatttgtggttggagtggtatgaagaatcccaattgcaagaaaatgtggagcagattcttgaagtgcttcaaccatatac |
15430352 |
T |
|
| Q |
517 |
ccaacagcttcaagaattgcatgtggttggatatacaggttcctatttcccagaatggatgtccagtctttctctaatacatttacggaagttacgtctc |
616 |
Q |
| |
|
||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||| | |||||||||||| |
|
|
| T |
15430353 |
ccaacagcttcaaagattgtgtgtggacggatatacaggttcctatttcccagaatggatgtctagtccttctttaatacacttaggaaagttacgtctc |
15430452 |
T |
|
| Q |
617 |
gaaaattgcaaaagctgtttacacctcccacaattgggaaaactaccttctctagaagttctagaattgttcgatctaccaaagctgacaaggttatcaa |
716 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15430453 |
aaaaattgcaaaagctgtttgcacctcccacaattgggaaaactaccttctctagaagttctagaattgttcgatctaccaaagctgacaaggttatcaa |
15430552 |
T |
|
| Q |
717 |
gggaggatggcgaaaatatgttccagcaactttttaatcttgaaataagatgatgtcc |
774 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
15430553 |
gggaggacggtgaaaatatgttccagcaactttttaatcttgaaataagaagatgtcc |
15430610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 45 - 669
Target Start/End: Complemental strand, 15082767 - 15082149
Alignment:
| Q |
45 |
gtcatttgaagagtttaaggtatttggatctttctcatggtcaatttgaaactcttccagaatccatatgtaaattgtggaatttacaaattttaaaatt |
144 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||| | ||| ||||||| |||||||||||||||||||| ||||| |
|
|
| T |
15082767 |
gtcatttgaagtttttaaggtacttggatctttctgtcggtgaatttgaaactcttccggcatctctatgtaagttgtggaatttacaaattttgaaatt |
15082668 |
T |
|
| Q |
145 |
agactattgttttagcctacaaaaattgcctaataatttgatgcacttgaaagctctacaacatctatccttaaaaaactgccgcgagctatcaagttta |
244 |
Q |
| |
|
| |||||||| | ||| | || |||||||||||||||||| ||||||||||||||||||||||||| || |||| | ||||||||||| |
|
|
| T |
15082667 |
acactattgtagaaacctccgaatattgcctaataatttgatacacttgaaagctctacaacatctatatttgtttggctgcttcagattatcaagttta |
15082568 |
T |
|
| Q |
245 |
cctcatcaaataggggagttgacttccttgaagactttgagcatgtatgtagttgg-aaggaaaagagagttccttttggaagaattaggacaattcaat |
343 |
Q |
| |
|
|||| | |||||| | ||||||||| ||| |||||||||||||||||||||||| |||| ||| |||||||| |||||||||||| || ||| |
|
|
| T |
15082567 |
cctcccaatatagggaacttgacttccctgaggactttgagcatgtatgtagttggcaagggaaa-------ccttttggcagaattaggacagttaaat |
15082475 |
T |
|
| Q |
344 |
ttcaaattagaccagtttcacattaagcaccttgagagagtgaaaagtgtagaagatgctaaagaagccaacatgttgagtaagcacgtgaacaatttgc |
443 |
Q |
| |
|
|||||| || | |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15082474 |
ttcaaagtaaatgagtttcacatcaaacaccttgagagagtgaaaaatgtagaagatgctaaagaagccaacatgttgagtaagcacgtgaacaatttgc |
15082375 |
T |
|
| Q |
444 |
ggttgacgtgggatgaagagtcccaattgcaagaaaatgtggtgcagattcttgaagtgcttcaaccttttgtccaacagcttcaagaattgcatgtggt |
543 |
Q |
| |
|
||||| | ||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| | |||||| |||||||||||| |||| |
|
|
| T |
15082374 |
ggttgtcatgggatgaagagtcccaattgcaggaaaatgtgaagcagatacttgaagtgcttcaaccttattcccaacaacttcaagaattgtgggtgga |
15082275 |
T |
|
| Q |
544 |
tggatatacaggttcctatttcccagaatggatgtccagtctttctctaatacatttacggaagttacgtctcgaaaattgcaaaagctgtttacacctc |
643 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| ||| |||| |||||||||||||| | |||| ||| |||||||||||||||||| ||| |
|
|
| T |
15082274 |
aggatatacaggtttccatttcccagaatggatgtctagttcttctttaatacatttacggtctatgtatctcaaaagttgcaaaagctgtttacatctc |
15082175 |
T |
|
| Q |
644 |
ccacaattgggaaaactaccttctct |
669 |
Q |
| |
|
||||| ||||| |||||||||||||| |
|
|
| T |
15082174 |
ccacagttggggaaactaccttctct |
15082149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 33 - 602
Target Start/End: Complemental strand, 15320697 - 15320128
Alignment:
| Q |
33 |
catcttcaattggtcatttgaagagtttaaggtatttggatctttctcatggtcaatttgaaactcttccagaatccatatgtaaattgtggaatttaca |
132 |
Q |
| |
|
|||||||||||||| |||| || | ||||||||||| || ||||| ||| | ||||||| |||||| |||||||||||| | ||||||||||| || |
|
|
| T |
15320697 |
catcttcaattggtaatttaaaatatctaaggtatttgaatttttcttcgggtgattttgaaattcttccggaatccatatgtcagttgtggaatttgca |
15320598 |
T |
|
| Q |
133 |
aattttaaaattagactattgttttagcctacaaaaattgcctaataatttgatgcacttgaaagctctacaacatctatccttaaaaaactgccgcgag |
232 |
Q |
| |
|
||||||||| ||||| | |||| ||| || || | |||||||||| ||||| || |||||| || |||||||| |||| || | |||| | |
|
|
| T |
15320597 |
aattttaaagttagatcactgttatagtctccagtacttgcctaatagtttgacacaattgaaatctttacaacatatatctttgattggctgct---at |
15320501 |
T |
|
| Q |
233 |
ctatcaagtttacctcatcaaataggggagttgacttccttgaagactttgagcatgtatgtagttggaaggaaaagagagttccttttggaagaattag |
332 |
Q |
| |
|
|||||||||| || | ||||||||| ||||||||||||||| |||||||||||||||| ||||||| | ||||||| ||||||||||| ||||||| |
|
|
| T |
15320500 |
atatcaagtttgccgcgccaaatagggaagttgacttccttgaggactttgagcatgtatatagttggcaacaaaagagggttccttttggcggaattag |
15320401 |
T |
|
| Q |
333 |
gacaattcaatttcaaattagaccagtttcacattaagcaccttgagagagtgaaaagtgtagaagatgctaaagaagccaacatgttgagtaagcacgt |
432 |
Q |
| |
|
||||| | ||| | ||| ||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| | |
|
|
| T |
15320400 |
gacaactaaatcttaaaggagagc---ttcacatcaagcaccttgagagagtgaaaagtgtaacagatgctaaagaagccaatatgtttagtaagcactt |
15320304 |
T |
|
| Q |
433 |
gaacaatttgcggttgacgtggga------tgaagagtcccaattgcaagaaaatgtggtgcagattcttgaagtgcttcaaccttttgtccaacagctt |
526 |
Q |
| |
|
|| | |||| ||||| ||||||| || ||||||||||||||| |||||||| | ||||||||||||||| ||||||||| | |||| || ||| |
|
|
| T |
15320303 |
gagccttttgtggttgtcgtgggagagaactgcagagtcccaattgcaggaaaatgtcgagcagattcttgaagttcttcaacctcatatccatcacctt |
15320204 |
T |
|
| Q |
527 |
caagaattgcatgtggttggatatacaggttcctatttcccagaatggatgtccagtctttctctaatacatttac |
602 |
Q |
| |
|
||||||||| |||| |||||||||||| | |||||||| |||||||||| |||| |||||||| | |||||| |
|
|
| T |
15320203 |
caagaattgagggtggaaggatatacaggtgtccatttcccacaatggatgtctagtccttctctaaaaaatttac |
15320128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 15421983 - 15422176
Alignment:
| Q |
20 |
ttacctaaagtgtcatcttcaattggtcatttgaagagtttaaggtatttggatctttctcatggtcaatttgaaactcttccagaatccatatgtaaat |
119 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||||||| | |
|
|
| T |
15421983 |
ttacctaaactgtcatcttcaattggtcatttgaagagtttaaggtacttggatctttctgatggtaaatttgaaactcttccaaaatccatatgtaagt |
15422082 |
T |
|
| Q |
120 |
tgtggaatttacaaattttaaaattagactattgttttagcctacaaaaattgcctaataatttgatgcacttgaaagctctacaacatctatc |
213 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||| | || ||||| ||||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
15422083 |
tgtggaatttacaagttttgaaattagaccattgtagaaaactccaaaatttgcctaataatttgatacgcttgaaagctctacaacatctatc |
15422176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 262 - 511
Target Start/End: Complemental strand, 17927180 - 17926928
Alignment:
| Q |
262 |
gttgacttccttgaagactttgagcatgtatgtagttggaaggaaaagagagttccttttggaagaattaggacaattcaatttcaaattagaccagttt |
361 |
Q |
| |
|
|||||||||| | | |||||| ||||| ||||| ||||| | |||||||| || |||||||||||||||||||||| | || | ||| ||| | || |
|
|
| T |
17927180 |
gttgacttccctaaggactttaagcatatatgttgttggtaagaaaagagggtaccttttggaagaattaggacaactaaaccttaaaggagagc---tt |
17927084 |
T |
|
| Q |
362 |
cacattaagcaccttgagagagtgaaaagtgtagaagatgctaaagaagccaacatgttgagtaagcacgtgaacaatttgcggttgacgtggg------ |
455 |
Q |
| |
|
||||| |||||||| |||||||| ||||||||| | |||| ||||||||||| |||| ||||| ||| ||||| | ||| ||||| | |||| |
|
|
| T |
17927083 |
cacatcaagcacctagagagagtaaaaagtgtaacacatgccaaagaagccaatatgtccagtaaacacttgaaccaattgaggttgtcatgggggagaa |
17926984 |
T |
|
| Q |
456 |
atgaagagtcccaattgcaagaaaatgtggtgcagattcttgaagtgcttcaacct |
511 |
Q |
| |
|
|||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||| |
|
|
| T |
17926983 |
atgaagagtcccaattacaaggaaatgtcgagcagattctcgaagtgcttcaacct |
17926928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 15346771 - 15346652
Alignment:
| Q |
93 |
aaactcttccagaatccatatgtaaattgtggaatttacaaattttaaaattagactattgttttagcctacaaaaattgcctaataatttgatgcactt |
192 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| || |||||||| ||||||||||| | || ||||| |||||||||| | || | ||||| |
|
|
| T |
15346771 |
aaactcttccagaatccttatgtacgttgtggaatttgcagattttaaagctagactattgtcaaaatctccaaaagttgcctaatagtctggtacactt |
15346672 |
T |
|
| Q |
193 |
gaaagctctacaacatctat |
212 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
15346671 |
gaaagctctacaacgtctat |
15346652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 15422193 - 15422247
Alignment:
| Q |
158 |
agcctacaaaaattgcctaataatttgatgcacttgaaagctctacaacatctat |
212 |
Q |
| |
|
||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15422193 |
agcctccaacaattgcctaataatttgatacacttgaaagctctacaacatctat |
15422247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 15354107 - 15353988
Alignment:
| Q |
93 |
aaactcttccagaatccatatgtaaattgtggaatttacaaattttaaaattagactattgttttagcctacaaaaattgcctaataatttgatgcactt |
192 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| || |||||||| ||||| |||||| |||||||| || ||||||| | || | ||||| |
|
|
| T |
15354107 |
aaactcttccagaatccttatgtacgttgtggaatttgcagattttaaagttagattattgtcaagaactacaaaagttccctaatagtctggtacactt |
15354008 |
T |
|
| Q |
193 |
gaaagctctacaacatctat |
212 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
15354007 |
gaaatctctacaacatctat |
15353988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 593
Target Start/End: Complemental strand, 16413505 - 16413269
Alignment:
| Q |
363 |
acattaagcaccttgagagagtgaaaagtgtagaaga-tgctaaagaagccaacatgttgagtaagcacgtgaacaatttgcggttgacgtggg------ |
455 |
Q |
| |
|
||||||||||| | |||||||| |||||||| || || ||| |||||||| || |||| ||| |||||||||||||| ||| ||| | |||| |
|
|
| T |
16413505 |
acattaagcacttggagagagttaaaagtgt-gatgaatgccaaagaagcaaatatgtcgagcaagcacgtgaacaacttgaaattgtcatgggggagaa |
16413407 |
T |
|
| Q |
456 |
atgaagagtcccaattgcaagaaaatgtggtgcagattcttgaagtgcttcaaccttttgtccaacagcttcaagaattgcatgtggttggatatacagg |
555 |
Q |
| |
|
||||||| |||||||| ||||||||||| | | |||||||||||| |||||||||| | |||||| |||||| || |||| ||||||||||| |
|
|
| T |
16413406 |
atgaagactcccaattacaagaaaatgttgagaagattcttgaagagcttcaacctcattcccaacaacttcaaagtctgggagtgggaggatatacagg |
16413307 |
T |
|
| Q |
556 |
ttcctatttcccagaatggatgtccagtctttctctaa |
593 |
Q |
| |
|
| ||||||| ||| |||||||||| |||| |||||||| |
|
|
| T |
16413306 |
tgcctattttccacaatggatgtctagtccttctctaa |
16413269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 670
Target Start/End: Complemental strand, 15353741 - 15353527
Alignment:
| Q |
456 |
atgaagagtcccaattgcaagaaaatgtggtgcagattcttgaagtgcttcaaccttttgtccaacagcttcaagaattgcatgtggttggatatacagg |
555 |
Q |
| |
|
|||||||||| ||||| || |||||||| | | ||||||||||||| ||||||||| ||||| |||||| || |||| | |||||||| || |
|
|
| T |
15353741 |
atgaagagtcacaattacaggaaaatgttgaggagattcttgaagttcttcaacctcaaactcaacaacttcaaagtctggatgttttaggatataccgg |
15353642 |
T |
|
| Q |
556 |
ttcctatttcccagaatggatgtccagtctttctctaatacatttacggaagttacgtctcgaaaattgcaaaagctgtttacacctcccacaattggga |
655 |
Q |
| |
|
||||| ||||||| ||||||||| || | |||||||| ||||||| | |||| |||| |||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
15353641 |
ttcctgtttcccactatggatgtctagcccttctctaaaacatttaaatactttacaactcgtgcattgcaaaagttgtttacaccttccacatttgggg |
15353542 |
T |
|
| Q |
656 |
aaactaccttctcta |
670 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
15353541 |
aaactaccatctcta |
15353527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 670
Target Start/End: Complemental strand, 15334870 - 15334821
Alignment:
| Q |
621 |
attgcaaaagctgtttacacctcccacaattgggaaaactaccttctcta |
670 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||| ||||| ||||| |
|
|
| T |
15334870 |
attgcaaaagctgtttacaccttccacagttgggaaaattacctgctcta |
15334821 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 15335464 - 15335339
Alignment:
| Q |
30 |
tgtcatcttcaattggtcatttgaagagtttaaggtatttggatctttctcatggtcaatttgaaactcttccagaatccatatgtaaattgtggaattt |
129 |
Q |
| |
|
||||||||||||||||| | | ||| | ||||||| ||| |||| ||| ||||| | || ||||||| ||| ||||| |||||| |||||||||||| |
|
|
| T |
15335464 |
tgtcatcttcaattggtagtctaaagtatctaaggtacttgaatctatctgatggtaagttcaaaactctaccaaaatccttatgtacattgtggaattt |
15335365 |
T |
|
| Q |
130 |
acaaattttaaaattagactattgtt |
155 |
Q |
| |
|
||| ||||| || |||||| |||||| |
|
|
| T |
15335364 |
acagattttgaagttagacaattgtt |
15335339 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 670
Target Start/End: Complemental strand, 15320103 - 15320060
Alignment:
| Q |
627 |
aaagctgtttacacctcccacaattgggaaaactaccttctcta |
670 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
15320103 |
aaagctgtttacacctcccacagttggggaaactaccttatcta |
15320060 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 511
Target Start/End: Complemental strand, 15335035 - 15334980
Alignment:
| Q |
456 |
atgaagagtcccaattgcaagaaaatgtggtgcagattcttgaagtgcttcaacct |
511 |
Q |
| |
|
|||||||||| || || ||||||||||| | | ||||||||||||||||||||||| |
|
|
| T |
15335035 |
atgaagagtctcatttacaagaaaatgttgaggagattcttgaagtgcttcaacct |
15334980 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 267 - 426
Target Start/End: Complemental strand, 8186565 - 8186409
Alignment:
| Q |
267 |
cttccttgaagactttgagcatgtatgtagttggaaggaaaagagagttccttttggaagaattaggacaattcaatttcaaattagaccagtttcacat |
366 |
Q |
| |
|
||||| ||| |||||| ||||||||||| ||||||| |||||||| ||| ||||||| |||||||| |||||| || ||||| ||||| || |||| |
|
|
| T |
8186565 |
cttccctgaggactttaagcatgtatgttgttggaaagaaaagagggttacttttggcagaattagaacaattgaacctcaaaggagacc---tttacat |
8186469 |
T |
|
| Q |
367 |
taagcaccttgagagagtgaaaagtgtagaagatgctaaagaagccaacatgttgagtaa |
426 |
Q |
| |
|
|||||||| |||||||| ||| |||| ||||| |||||||||||||||| |||||| |
|
|
| T |
8186468 |
caagcacctagagagagtaaaatgtgtcatggatgccaaagaagccaacatgtcgagtaa |
8186409 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 8186800 - 8186715
Alignment:
| Q |
32 |
tcatcttcaattggtcatttgaagagtttaaggtatttggatctttctcatggtcaatttgaaactcttccagaatccatatgtaa |
117 |
Q |
| |
|
|||||||||||||||| |||||| | ||||||| ||| |||||||| | ||| | || ||||||||||||||||| ||||||| |
|
|
| T |
8186800 |
tcatcttcaattggtcgtttgaaatatctaaggtacttgaatctttctaacggtgacttccaaactcttccagaatccttatgtaa |
8186715 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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