View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1561_low_2 (Length: 428)

Name: NF1561_low_2
Description: NF1561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1561_low_2
NF1561_low_2
[»] chr8 (5 HSPs)
chr8 (315-408)||(3810689-3810783)
chr8 (315-408)||(33473867-33473961)
chr8 (333-408)||(31030384-31030460)
chr8 (315-408)||(40041273-40041367)
chr8 (341-396)||(19711926-19711981)
[»] chr7 (5 HSPs)
chr7 (315-408)||(42148715-42148808)
chr7 (313-402)||(26502567-26502656)
chr7 (313-402)||(26590058-26590147)
chr7 (314-402)||(19365533-19365621)
chr7 (348-400)||(47523211-47523263)
[»] chr3 (9 HSPs)
chr3 (314-408)||(54718329-54718423)
chr3 (317-408)||(11433693-11433784)
chr3 (314-402)||(33461226-33461314)
chr3 (315-388)||(5834720-5834793)
chr3 (313-407)||(32319297-32319392)
chr3 (319-402)||(33573585-33573668)
chr3 (315-408)||(6876538-6876631)
chr3 (314-402)||(35585364-35585452)
chr3 (340-401)||(29750904-29750965)
[»] chr1 (5 HSPs)
chr1 (315-408)||(40371716-40371810)
chr1 (317-408)||(32055182-32055273)
chr1 (311-404)||(12259163-12259256)
chr1 (315-388)||(49605258-49605331)
chr1 (319-387)||(42282392-42282460)
[»] chr2 (4 HSPs)
chr2 (318-396)||(40606911-40606989)
chr2 (317-408)||(24127945-24128036)
chr2 (314-408)||(5188868-5188962)
chr2 (315-402)||(32035176-32035263)
[»] chr4 (6 HSPs)
chr4 (309-405)||(14272905-14273000)
chr4 (313-408)||(54734620-54734716)
chr4 (313-407)||(44253879-44253973)
chr4 (324-401)||(44255729-44255806)
chr4 (315-388)||(51780173-51780246)
chr4 (323-399)||(33283006-33283082)
[»] chr5 (2 HSPs)
chr5 (315-407)||(5125232-5125325)
chr5 (315-405)||(13678726-13678816)
[»] chr6 (2 HSPs)
chr6 (315-388)||(3342470-3342543)
chr6 (315-407)||(34787112-34787204)
[»] scaffold1414 (1 HSPs)
scaffold1414 (318-402)||(935-1019)
[»] scaffold0057 (1 HSPs)
scaffold0057 (351-407)||(39509-39565)


Alignment Details
Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 3810689 - 3810783
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccc-tttgtataaaataaaactcaatc 408  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  3810689 ggaagttataccccacacccctacatttataccttgaccccaacatttgacacaaagtaccaaatttacccttttatataaaataaaactcaatc 3810783  T

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Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 33473961 - 33473867
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttacc-ctttgtataaaataaaactcaatc 408  Q
    |||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||  ||| ||||||| |||||||||||    
T  33473961 ggaagttatatcccacatccctacatttatactttgacctcaacatttgacacaatgtaccaaatttacctttttatataaaagaaaactcaatc 33473867  T

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Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 408
Target Start/End: Complemental strand, 31030460 - 31030384
Alignment:
Q  333 ccctacatttatactttgaccccaatatttgacacaaa-gtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    |||||||| |||||  | ||||||| |||||||| ||| |||||||||||||| ||| |||||||||||||||||||    
T  31030460 ccctacatatataccctcaccccaacatttgacataaaagtaccaaatttaccttttatataaaataaaactcaatc 31030384  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 40041367 - 40041273
Alignment:
Q  315 ggaagttataccccacatccct-acatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    |||||||||| |||||| |||  |||||||||| || | ||||| |||| ||||||| |||||||||||| ||||| |||||| ||||| |||||    
T  40041367 ggaagttatatcccacacccccgacatttatacgttcatcccaacatttaacacaaactaccaaatttactctttgcataaaacaaaacacaatc 40041273  T

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Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 19711981 - 19711926
Alignment:
Q  341 ttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaa 396  Q
    |||||| || ||||||| |||||||| ||| ||||||||||||||||| |||||||    
T  19711981 ttataccttcaccccaacatttgacataaactaccaaatttaccctttatataaaa 19711926  T

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Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 42148715 - 42148808
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    |||||||||||  || | |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  42148715 ggaagttatacttcatacccctacatttatacgttgaccccaacatttgacacaaagtaccaaatttaccctttatataaaataaaacttaatc 42148808  T

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Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 26502567 - 26502656
Alignment:
Q  313 taggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    ||||| ||||||||||||| |||||||||||||| || ||||||| |||||||||||| |||| |||||||||| | ||||||| |||||    
T  26502567 taggacgttataccccacacccctacatttatacctttaccccaacatttgacacaaactacccaatttaccctctttataaaacaaaac 26502656  T

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Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 26590147 - 26590058
Alignment:
Q  313 taggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    ||||| ||||||||||||| |||||||||||||| || ||||||| |||||||||||| |||| |||||||||| | ||||||| |||||    
T  26590147 taggacgttataccccacacccctacatttatacctttaccccaacatttgacacaaactacccaatttaccctctttataaaacaaaac 26590058  T

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Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 402
Target Start/End: Original strand, 19365533 - 19365621
Alignment:
Q  314 aggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    |||| ||||||||||| | |||||||||||||| || ||||||| |||| ||| ||| ||||||| ||||||||| ||||||| |||||    
T  19365533 aggacgttataccccagacccctacatttatacctttaccccaacatttaacataaaataccaaaattaccctttatataaaacaaaac 19365621  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 47523211 - 47523263
Alignment:
Q  348 ttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaa 400  Q
    ||||| |||| ||| |||||||| || |||||||||||||| |||||||||||    
T  47523211 ttgactccaacattagacacaaactatcaaatttaccctttatataaaataaa 47523263  T

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Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 54718329 - 54718423
Alignment:
Q  314 aggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    |||||||||||||||||| |||||||||||||| |||||||||| |||| ||| ||||| |||||||||| |||| |||||||||||| ||||||    
T  54718329 aggaagttataccccacacccctacatttataccttgaccccaacatttaacataaagttccaaatttactctttatataaaataaaattcaatc 54718423  T

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Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 11433784 - 11433693
Alignment:
Q  317 aagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||| || ||||||||||||||| |||||| ||||| |||||    
T  11433784 aagttataccccacaaccctacatttatactttcaccccaacatttaacacaaactatcaaatttaccctttgcataaaacaaaacacaatc 11433693  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 402
Target Start/End: Original strand, 33461226 - 33461314
Alignment:
Q  314 aggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    |||| ||||||||||||| |||||||||||||| || ||||||| |||||||||||| || | |||||||||| | ||||||| |||||    
T  33461226 aggacgttataccccacacccctacatttatacctttaccccaacatttgacacaaactatccaatttaccctctatataaaacaaaac 33461314  T

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Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 5834720 - 5834793
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttacccttt 388  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||| || |||| | || ||||||||||||    
T  5834720 ggaagttttaccccacacccctacatttataccttgaccccaatattttactcaaactgcccaatttacccttt 5834793  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 407
Target Start/End: Original strand, 32319297 - 32319392
Alignment:
Q  313 taggaagttataccccacatccctacatttatactttgacccc-aatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaat 407  Q
    |||||||||||||||||||  |||||  |||||| || ||||| || |||| ||||||| ||||||||||| ||||| ||||||||||||| ||||    
T  32319297 taggaagttataccccacactcctactattataccttaacccccaacattttacacaaactaccaaatttatcctttatataaaataaaacacaat 32319392  T

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Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 33573585 - 33573668
Alignment:
Q  319 gttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    ||||||||| ||| |||||||||||||| || ||||||| |||| ||||||| ||| ||| ||||||||| ||||||| |||||    
T  33573585 gttataccctacacccctacatttatacctttaccccaacatttaacacaaactacaaaaattaccctttatataaaacaaaac 33573668  T

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Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 6876631 - 6876538
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    ||||||||||||| ||| |||| ||||||||| |||| ||| | |||| ||||||| || |||||||||| ||| | ||||||||||| |||||    
T  6876631 ggaagttatacccaacacccctgcatttataccttgatcccgacatttaacacaaactatcaaatttaccatttttgtaaaataaaacacaatc 6876538  T

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Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 402
Target Start/End: Complemental strand, 35585452 - 35585364
Alignment:
Q  314 aggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    |||||||||||||||| | ||||||  |||||| || ||||||| |||| | ||||| |||||| |||||||||| || ||||||||||    
T  35585452 aggaagttataccccatacccctactattataccttcaccccaacattttaaacaaactaccaattttaccctttataaaaaataaaac 35585364  T

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Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 401
Target Start/End: Complemental strand, 29750965 - 29750904
Alignment:
Q  340 tttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaa 401  Q
    |||||| ||||||||||| |||||| | ||||||| ||||||| ||||| ||||||||||||    
T  29750965 tttatattttgaccccaacatttgatataaagtactaaatttatcctttatataaaataaaa 29750904  T

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Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 40371810 - 40371716
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccc-tttgtataaaataaaactcaatc 408  Q
    ||||||||||||||||| |||||||||||||| |||||| | |||||||||| |||||| ||||||||||| |||  ||||||||||||||||||    
T  40371810 ggaagttataccccacacccctacatttatacattgacctcgatatttgacataaagtatcaaatttacccttttacataaaataaaactcaatc 40371716  T

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Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 32055273 - 32055182
Alignment:
Q  317 aagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    |||||||||||| || ||||| |||||||| ||||||| || |||| |||||||||  |||||||||||||| |||||||||| ||||||||    
T  32055273 aagttataccccgcaaccctatatttataccttgaccctaacatttaacacaaagtttcaaatttaccctttatataaaataatactcaatc 32055182  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 12259256 - 12259163
Alignment:
Q  311 actaggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactc 404  Q
    |||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||| ||| || |||||||| ||||  |  ||||||||||||    
T  12259256 actaggaagttaaacctcacacccctacatttataccttgaccccaatatttgacataaactatcaaatttatccttaattcaaaataaaactc 12259163  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 49605258 - 49605331
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttacccttt 388  Q
    |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| || ||| |||| |||||    
T  49605258 ggaagttataccccacatccctacatttatacatcgaccctaatatttgacacaaactatcaagtttatccttt 49605331  T

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Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 42282460 - 42282392
Alignment:
Q  319 gttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctt 387  Q
    ||||||||| ||| |||||||||||||| |  ||||||| |||| ||||||| ||||||| ||||||||    
T  42282460 gttataccctacacccctacatttatacctataccccaacatttaacacaaactaccaaaattaccctt 42282392  T

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Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 40606989 - 40606911
Alignment:
Q  318 agttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaa 396  Q
    |||||||||||||| |||| ||||||||| || ||||||| |||||||||||| ||||||||||||||||| |||||||    
T  40606989 agttataccccacacccctgcatttataccttcaccccaacatttgacacaaactaccaaatttaccctttatataaaa 40606911  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 408
Target Start/End: Original strand, 24127945 - 24128036
Alignment:
Q  317 aagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    ||||||||||||| | |||||||||||||| || ||||||| |||| ||||||| | ||||||||| | ||| ||||||| ||||| |||||    
T  24127945 aagttataccccatacccctacatttataccttcaccccaacattttacacaaacttccaaatttatcttttatataaaacaaaacacaatc 24128036  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 5188962 - 5188868
Alignment:
Q  314 aggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaatc 408  Q
    |||||||||||||||||| |||||||||||||  ||||||||||  ||| ||| ||||| | || | ||||||||  ||||||||||| ||||||    
T  5188962 aggaagttataccccacacccctacatttatatcttgaccccaacctttaacataaagttcgaattataccctttacataaaataaaattcaatc 5188868  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 402
Target Start/End: Complemental strand, 32035263 - 32035176
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    ||||||||||||| | | ||||||  ||||||||| ||||||| |||| |||  || ||||||||||||||||| |||||||| ||||    
T  32035263 ggaagttataccctatacccctactattatacttttaccccaacattttacatgaactaccaaatttaccctttatataaaattaaac 32035176  T

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Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 405
Target Start/End: Original strand, 14272905 - 14273000
Alignment:
Q  309 atactaggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactca 405  Q
    |||| |||||||| ||||||||| ||||||| |||||||| || ||||| |||| || |||| |||| |||||||||||| ||||||||||||||||    
T  14272905 ataccaggaagttttaccccacacccctacagttatactt-gatcccaacatttcactcaaactacctaatttaccctttatataaaataaaactca 14273000  T

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Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 54734620 - 54734716
Alignment:
Q  313 taggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtat-aaaataaaactcaatc 408  Q
    ||||||||||||||||| | ||||||| |||||| || |||| || ||| |||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  54734620 taggaagttataccccatacccctacaattataccttcaccctaacattagacacaaactaccaaatttaccctttatataaaaataaaacacaatc 54734716  T

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Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 407
Target Start/End: Original strand, 44253879 - 44253973
Alignment:
Q  313 taggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaat 407  Q
    ||||||||||||||||||| || || |||||||| || ||||||| |||| |||||||||   || |||||||||| ||||||||||||| ||||    
T  44253879 taggaagttataccccacacccatatatttataccttcaccccaacatttaacacaaagttttaattttaccctttatataaaataaaacacaat 44253973  T

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Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 44255806 - 44255729
Alignment:
Q  324 accccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaa 401  Q
    |||||||| |||||||||||||  || ||| |||||||| ||||||||| |||| ||| |||||| ||||||||||||    
T  44255806 accccacacccctacatttatatcttcacctcaatatttaacacaaagttccaattttgccctttatataaaataaaa 44255729  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 51780246 - 51780173
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttacccttt 388  Q
    ||||||| ||||||||| |||||||||||| |||||| ||||| ||||||  |||| |||| || |||||||||    
T  51780246 ggaagttttaccccacacccctacatttattctttgatcccaagatttgatccaaactacctaaattacccttt 51780173  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 33283082 - 33283006
Alignment:
Q  323 taccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataa 399  Q
    ||||||| | ||||||  |||||| ||||||||||||||| || |||| || | |||||||||||| ||||||||||    
T  33283082 taccccatacccctacggttataccttgaccccaatatttcactcaaactatctaatttaccctttatataaaataa 33283006  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 407
Target Start/End: Original strand, 5125232 - 5125325
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgacccc-aatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaat 407  Q
    ||||||||||||||||| ||||||  |||||| | |||||| || |||| | ||||| || |||||||||||||| ||||||||||||| ||||    
T  5125232 ggaagttataccccacacccctactattatacctcgacccccaacattttatacaaactatcaaatttaccctttttataaaataaaacacaat 5125325  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 405
Target Start/End: Complemental strand, 13678816 - 13678726
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactca 405  Q
    ||||||| ||||||||| ||||||  |||||| ||||||| || |||| ||  ||| || |  ||||||||||| ||||||||||||||||    
T  13678816 ggaagttttaccccacacccctacggttataccttgaccctaacatttcacttaaactatctgatttaccctttatataaaataaaactca 13678726  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 3342470 - 3342543
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttacccttt 388  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||||| || |||| |  | ||||||||||||    
T  3342470 ggaagttttaccccacatccctatatttctacattgaccccaatattttactcaaactgtccaatttacccttt 3342543  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 407
Target Start/End: Complemental strand, 34787204 - 34787112
Alignment:
Q  315 ggaagttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaat 407  Q
    |||||||||| || ||| |||||||||||||| || |  |||| |||||||||||| |||   ||||||| ||| ||||||| ||||| ||||    
T  34787204 ggaagttatatcctacacccctacatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat 34787112  T

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Target: scaffold1414 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 935 - 1019
Alignment:
Q  318 agttataccccacatccctacatttatactttgaccccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaac 402  Q
    |||||||||||||| ||||||  |||||| || || |||| |||| | | ||| ||||||||||||||||  |||||||||||||    
T  935 agttataccccacacccctactattatacctttactccaacattttatataaactaccaaatttacccttcatataaaataaaac 1019  T

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Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 407
Target Start/End: Complemental strand, 39565 - 39509
Alignment:
Q  351 accccaatatttgacacaaagtaccaaatttaccctttgtataaaataaaactcaat 407  Q
    ||||||| |||||||||||| ||||||||||| ||||| ||||||| ||||| ||||    
T  39565 accccaacatttgacacaaactaccaaatttatcctttatataaaacaaaacacaat 39509  T

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