View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15624_high_15 (Length: 336)
Name: NF15624_high_15
Description: NF15624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15624_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 15592280 - 15592059
Alignment:
| Q |
1 |
ggtgaaggaaacacaaaatcaaatgttgaaataaatgaagatcataacattgatacaagtttgcctaatgatggaactaaggcattcaaagaagagagat |
100 |
Q |
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| T |
15592280 |
ggtgaaggaaacacaaaatcaaatgttcaaataaataaagatcagaacaatgatacaagtttgcctagtgatggaactaagacattcaaagaagagagat |
15592181 |
T |
|
| Q |
101 |
cgttgcagccattgtgaccaaagatactactcaatgcatctggattacttacgatacaagttacaccattgattagaattttattttaatagatatcatt |
200 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
15592180 |
cgttgcagccattttgaccaaagatactactcaatgcatctggattacttacgatacaagttaatccattgattagaattttattttaatagatatcatt |
15592081 |
T |
|
| Q |
201 |
gaattagcattagttagattga |
222 |
Q |
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||||| |||||||||||||||| |
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| T |
15592080 |
gaattcgcattagttagattga |
15592059 |
T |
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