View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15624_high_20 (Length: 309)

Name: NF15624_high_20
Description: NF15624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15624_high_20
NF15624_high_20
[»] chr4 (93 HSPs)
chr4 (25-145)||(842193-842313)
chr4 (135-289)||(3649584-3649738)
chr4 (102-262)||(33552793-33552953)
chr4 (102-262)||(23521855-23522015)
chr4 (102-290)||(44324293-44324481)
chr4 (102-262)||(50727864-50728024)
chr4 (102-262)||(50735878-50736038)
chr4 (102-273)||(21579990-21580161)
chr4 (135-262)||(43641074-43641201)
chr4 (148-289)||(22318381-22318522)
chr4 (113-262)||(32181238-32181387)
chr4 (102-262)||(9807131-9807290)
chr4 (102-262)||(33176983-33177143)
chr4 (149-273)||(47642489-47642613)
chr4 (102-262)||(55593860-55594020)
chr4 (134-257)||(1231291-1231414)
chr4 (102-262)||(24002313-24002474)
chr4 (102-257)||(36885912-36886067)
chr4 (136-290)||(37865699-37865854)
chr4 (135-273)||(2725117-2725254)
chr4 (149-279)||(41711805-41711935)
chr4 (149-262)||(29785535-29785648)
chr4 (177-290)||(41720790-41720903)
chr4 (149-262)||(56154596-56154709)
chr4 (102-290)||(24210264-24210454)
chr4 (102-262)||(49152051-49152210)
chr4 (135-278)||(50178476-50178620)
chr4 (135-262)||(9512324-9512451)
chr4 (135-262)||(20802515-20802642)
chr4 (102-257)||(38812500-38812655)
chr4 (135-278)||(52949680-52949822)
chr4 (135-262)||(55065317-55065444)
chr4 (173-290)||(29616116-29616234)
chr4 (136-262)||(37695526-37695652)
chr4 (136-290)||(43739408-43739562)
chr4 (136-289)||(53200628-53200782)
chr4 (136-273)||(38486242-38486379)
chr4 (113-262)||(54542965-54543113)
chr4 (122-262)||(2786939-2787079)
chr4 (135-290)||(44649148-44649301)
chr4 (102-262)||(46680461-46680621)
chr4 (102-257)||(4325771-4325926)
chr4 (246-296)||(842142-842192)
chr4 (135-257)||(21202720-21202841)
chr4 (135-253)||(34929899-34930017)
chr4 (149-251)||(52319309-52319411)
chr4 (137-262)||(7001829-7001952)
chr4 (149-262)||(20518020-20518133)
chr4 (149-262)||(36743686-36743799)
chr4 (149-278)||(50186487-50186616)
chr4 (102-262)||(29592870-29593030)
chr4 (139-262)||(7554945-7555068)
chr4 (136-278)||(26083297-26083440)
chr4 (135-262)||(36497192-36497319)
chr4 (102-273)||(39078625-39078796)
chr4 (180-262)||(14296572-14296654)
chr4 (180-262)||(14314820-14314902)
chr4 (135-257)||(20694351-20694473)
chr4 (149-218)||(28115271-28115340)
chr4 (136-272)||(9947894-9948030)
chr4 (135-257)||(23327897-23328021)
chr4 (148-290)||(45577689-45577829)
chr4 (136-262)||(11056017-11056143)
chr4 (136-254)||(12600869-12600987)
chr4 (135-272)||(44355838-44355976)
chr4 (149-273)||(47361411-47361531)
chr4 (136-218)||(50729527-50729609)
chr4 (193-262)||(985257-985326)
chr4 (149-262)||(37931895-37932008)
chr4 (114-262)||(6776553-6776701)
chr4 (174-286)||(31445899-31446010)
chr4 (180-255)||(56487281-56487356)
chr4 (136-238)||(37859244-37859346)
chr4 (150-272)||(43189762-43189883)
chr4 (102-219)||(2629902-2630019)
chr4 (174-262)||(7381255-7381340)
chr4 (107-204)||(25978567-25978664)
chr4 (181-262)||(41261974-41262055)
chr4 (177-262)||(42772733-42772818)
chr4 (135-262)||(42869948-42870073)
chr4 (180-235)||(2858400-2858455)
chr4 (151-262)||(32858298-32858408)
chr4 (222-273)||(44640302-44640353)
chr4 (174-271)||(3579089-3579187)
chr4 (149-290)||(16320468-16320607)
chr4 (135-272)||(21098498-21098636)
chr4 (152-254)||(43893560-43893662)
chr4 (148-238)||(52673810-52673900)
chr4 (139-262)||(30942763-30942886)
chr4 (162-228)||(39513431-39513497)
chr4 (174-248)||(40792406-40792480)
chr4 (174-219)||(34559968-34560013)
chr4 (193-253)||(280187-280247)
[»] chr5 (51 HSPs)
chr5 (102-278)||(3735313-3735489)
chr5 (135-262)||(40489309-40489436)
chr5 (135-262)||(39918479-39918606)
chr5 (149-290)||(31644390-31644531)
chr5 (135-290)||(41790459-41790615)
chr5 (135-262)||(2351652-2351779)
chr5 (135-262)||(32528687-32528814)
chr5 (102-290)||(32092946-32093133)
chr5 (102-262)||(34794859-34795019)
chr5 (102-257)||(21739125-21739280)
chr5 (135-273)||(39788153-39788292)
chr5 (136-262)||(4818138-4818264)
chr5 (149-290)||(24036176-24036315)
chr5 (135-273)||(31880073-31880211)
chr5 (149-290)||(4689709-4689850)
chr5 (149-262)||(7208241-7208354)
chr5 (136-257)||(22493417-22493537)
chr5 (102-254)||(7523152-7523304)
chr5 (136-262)||(553368-553495)
chr5 (136-278)||(18470426-18470568)
chr5 (136-262)||(28090518-28090644)
chr5 (149-278)||(7770290-7770419)
chr5 (102-259)||(17031132-17031289)
chr5 (149-262)||(41459561-41459674)
chr5 (102-262)||(29241350-29241510)
chr5 (135-262)||(24181621-24181748)
chr5 (136-290)||(8560980-8561133)
chr5 (136-262)||(11963313-11963439)
chr5 (135-257)||(35701254-35701376)
chr5 (136-273)||(6311658-6311794)
chr5 (149-262)||(40182436-40182549)
chr5 (149-257)||(700612-700720)
chr5 (135-262)||(31770588-31770715)
chr5 (149-262)||(5571655-5571766)
chr5 (136-262)||(23091302-23091428)
chr5 (150-262)||(6284310-6284423)
chr5 (148-245)||(27839083-27839180)
chr5 (149-257)||(5673121-5673224)
chr5 (136-262)||(7725807-7725933)
chr5 (135-219)||(8136852-8136936)
chr5 (135-254)||(22432306-22432425)
chr5 (192-254)||(612520-612582)
chr5 (135-272)||(35760622-35760761)
chr5 (180-262)||(8360395-8360476)
chr5 (193-253)||(1338601-1338661)
chr5 (218-290)||(32313782-32313854)
chr5 (173-219)||(5598495-5598541)
chr5 (204-273)||(35954974-35955044)
chr5 (131-216)||(11090861-11090946)
chr5 (193-272)||(24206332-24206412)
chr5 (234-278)||(40563829-40563873)
[»] chr2 (57 HSPs)
chr2 (102-273)||(7761531-7761702)
chr2 (113-262)||(16104246-16104395)
chr2 (102-290)||(41366068-41366253)
chr2 (136-281)||(25383084-25383235)
chr2 (149-262)||(37003873-37003986)
chr2 (102-262)||(5278792-5278952)
chr2 (102-262)||(33366582-33366742)
chr2 (135-262)||(2645077-2645204)
chr2 (135-273)||(19513680-19513818)
chr2 (125-247)||(26796216-26796337)
chr2 (136-262)||(44284601-44284727)
chr2 (102-290)||(32766462-32766651)
chr2 (135-262)||(17540686-17540814)
chr2 (102-262)||(32497887-32498047)
chr2 (102-254)||(42706339-42706491)
chr2 (150-257)||(9717201-9717308)
chr2 (102-257)||(35114762-35114917)
chr2 (136-262)||(9732922-9733048)
chr2 (135-273)||(33889204-33889342)
chr2 (102-262)||(7258868-7259029)
chr2 (136-257)||(26418900-26419021)
chr2 (102-262)||(34338782-34338942)
chr2 (149-290)||(40832474-40832617)
chr2 (102-289)||(6896113-6896300)
chr2 (151-262)||(30326338-30326449)
chr2 (136-262)||(41934553-41934679)
chr2 (149-262)||(4641488-4641601)
chr2 (102-290)||(37308599-37308787)
chr2 (135-278)||(13829394-13829537)
chr2 (137-272)||(18278874-18278999)
chr2 (136-254)||(12939292-12939410)
chr2 (136-262)||(18685808-18685934)
chr2 (149-262)||(12672479-12672592)
chr2 (149-290)||(45463115-45463255)
chr2 (102-262)||(10399828-10399988)
chr2 (149-257)||(30798494-30798602)
chr2 (135-262)||(3913451-3913578)
chr2 (102-205)||(38623262-38623365)
chr2 (149-290)||(2086015-2086157)
chr2 (135-262)||(40692277-40692396)
chr2 (149-290)||(27462807-27462946)
chr2 (180-262)||(18793297-18793379)
chr2 (135-272)||(1230873-1231010)
chr2 (149-210)||(1247171-1247232)
chr2 (149-262)||(11114844-11114957)
chr2 (193-290)||(20907533-20907630)
chr2 (158-290)||(35473014-35473146)
chr2 (102-262)||(42365549-42365709)
chr2 (149-252)||(16177888-16177991)
chr2 (135-290)||(28824548-28824703)
chr2 (135-262)||(38993062-38993189)
chr2 (150-262)||(39461286-39461401)
chr2 (180-259)||(7294427-7294506)
chr2 (135-278)||(30712813-30712959)
chr2 (196-259)||(31148784-31148847)
chr2 (180-237)||(16062130-16062186)
chr2 (136-216)||(26981701-26981781)
[»] chr1 (79 HSPs)
chr1 (135-273)||(17327715-17327853)
chr1 (113-289)||(39281848-39282024)
chr1 (149-290)||(38663085-38663226)
chr1 (102-262)||(844757-844917)
chr1 (102-262)||(16476188-16476348)
chr1 (102-262)||(26118248-26118408)
chr1 (136-278)||(11772699-11772841)
chr1 (151-289)||(15539972-15540110)
chr1 (102-290)||(13994108-13994296)
chr1 (149-257)||(1601159-1601267)
chr1 (102-262)||(16386835-16386995)
chr1 (135-262)||(42510506-42510633)
chr1 (102-262)||(6711079-6711239)
chr1 (105-272)||(6771338-6771506)
chr1 (102-262)||(16451108-16451268)
chr1 (150-262)||(31004113-31004225)
chr1 (135-278)||(6029367-6029510)
chr1 (136-262)||(28340370-28340496)
chr1 (135-257)||(30105746-30105868)
chr1 (136-262)||(45490942-45491068)
chr1 (113-262)||(16437343-16437492)
chr1 (114-262)||(10384348-10384496)
chr1 (173-273)||(46154870-46154970)
chr1 (125-273)||(50382459-50382607)
chr1 (135-262)||(12890219-12890346)
chr1 (149-256)||(16704713-16704820)
chr1 (135-262)||(35387377-35387504)
chr1 (135-262)||(42512836-42512963)
chr1 (102-290)||(17887899-17888089)
chr1 (136-262)||(25539836-25539962)
chr1 (136-293)||(41967916-41968074)
chr1 (136-278)||(50304616-50304758)
chr1 (196-272)||(30798818-30798894)
chr1 (135-262)||(32270334-32270461)
chr1 (102-272)||(32289377-32289547)
chr1 (204-290)||(47092977-47093063)
chr1 (148-290)||(570339-570483)
chr1 (135-244)||(26764861-26764970)
chr1 (136-257)||(41972898-41973018)
chr1 (102-290)||(44738075-44738263)
chr1 (135-255)||(1351501-1351621)
chr1 (102-278)||(6144019-6144195)
chr1 (102-262)||(7183899-7184059)
chr1 (136-284)||(45658780-45658928)
chr1 (158-273)||(32467910-32468025)
chr1 (102-262)||(24339671-24339830)
chr1 (136-262)||(51264476-51264602)
chr1 (149-290)||(25343289-25343430)
chr1 (149-262)||(49303434-49303546)
chr1 (149-262)||(50540325-50540438)
chr1 (174-290)||(15324110-15324226)
chr1 (136-242)||(46447665-46447771)
chr1 (137-286)||(504459-504608)
chr1 (202-262)||(4895374-4895434)
chr1 (149-257)||(42705318-42705426)
chr1 (193-259)||(29032547-29032612)
chr1 (136-273)||(31574323-31574461)
chr1 (102-227)||(7837149-7837274)
chr1 (184-273)||(20495006-20495095)
chr1 (199-272)||(49799348-49799421)
chr1 (102-254)||(5109718-5109869)
chr1 (148-259)||(16862491-16862602)
chr1 (136-227)||(26733571-26733662)
chr1 (174-257)||(34663913-34663996)
chr1 (156-262)||(2761643-2761748)
chr1 (204-290)||(34283953-34284039)
chr1 (193-290)||(32215347-32215444)
chr1 (222-278)||(7836565-7836621)
chr1 (122-218)||(38087049-38087145)
chr1 (199-271)||(47242645-47242716)
chr1 (174-262)||(51703268-51703355)
chr1 (135-254)||(3414919-3415038)
chr1 (159-218)||(16643272-16643331)
chr1 (148-251)||(39792800-39792902)
chr1 (174-262)||(43310377-43310466)
chr1 (174-273)||(40856111-40856216)
chr1 (193-254)||(30104980-30105041)
chr1 (174-219)||(40610746-40610791)
chr1 (156-237)||(46815816-46815897)
[»] scaffold0181 (1 HSPs)
scaffold0181 (149-262)||(19101-19214)
[»] chr8 (65 HSPs)
chr8 (109-262)||(5968844-5968997)
chr8 (102-262)||(30542995-30543155)
chr8 (108-278)||(10656665-10656835)
chr8 (102-290)||(29563199-29563388)
chr8 (102-262)||(34063100-34063260)
chr8 (102-252)||(4052462-4052612)
chr8 (136-262)||(12753332-12753458)
chr8 (136-262)||(31732036-31732162)
chr8 (102-262)||(8673028-8673188)
chr8 (102-262)||(29672296-29672456)
chr8 (102-262)||(32019974-32020134)
chr8 (174-278)||(41548574-41548678)
chr8 (121-289)||(45114000-45114168)
chr8 (135-262)||(6386548-6386675)
chr8 (102-257)||(7394787-7394942)
chr8 (135-278)||(7591453-7591596)
chr8 (102-273)||(15001428-15001598)
chr8 (136-262)||(27103931-27104057)
chr8 (136-273)||(14005051-14005188)
chr8 (149-262)||(25478215-25478328)
chr8 (149-278)||(30501101-30501230)
chr8 (102-290)||(31513556-31513745)
chr8 (149-262)||(45446427-45446540)
chr8 (102-290)||(35225606-35225794)
chr8 (102-262)||(37618365-37618525)
chr8 (102-262)||(37664256-37664416)
chr8 (175-262)||(10531250-10531337)
chr8 (135-262)||(16595155-16595282)
chr8 (135-262)||(32303591-32303718)
chr8 (135-262)||(41709749-41709876)
chr8 (136-278)||(10467020-10467162)
chr8 (149-262)||(3251676-3251789)
chr8 (149-262)||(13406955-13407068)
chr8 (148-272)||(54133-54256)
chr8 (135-278)||(22999213-22999357)
chr8 (102-289)||(29611028-29611215)
chr8 (136-257)||(17805667-17805789)
chr8 (136-237)||(36426254-36426355)
chr8 (149-278)||(39642839-39642968)
chr8 (174-286)||(15351684-15351795)
chr8 (102-278)||(16485782-16485958)
chr8 (149-273)||(34101469-34101593)
chr8 (102-262)||(40389012-40389172)
chr8 (151-262)||(10932708-10932819)
chr8 (156-273)||(10320304-10320421)
chr8 (152-278)||(6460219-6460344)
chr8 (135-218)||(21272700-21272783)
chr8 (149-254)||(27109561-27109666)
chr8 (161-272)||(14958921-14959031)
chr8 (177-255)||(11926878-11926956)
chr8 (204-273)||(28746284-28746353)
chr8 (175-255)||(11944854-11944934)
chr8 (193-289)||(37474664-37474760)
chr8 (175-262)||(5859518-5859605)
chr8 (151-254)||(17520583-17520678)
chr8 (175-252)||(3361789-3361866)
chr8 (206-262)||(18297444-18297498)
chr8 (193-252)||(3394309-3394369)
chr8 (159-242)||(7722261-7722344)
chr8 (203-262)||(14012316-14012375)
chr8 (174-228)||(5892074-5892128)
chr8 (233-290)||(9624181-9624239)
chr8 (148-238)||(22756430-22756520)
chr8 (176-290)||(38260805-38260920)
chr8 (240-272)||(27408987-27409019)
[»] chr7 (73 HSPs)
chr7 (136-289)||(48445470-48445623)
chr7 (174-290)||(15035284-15035400)
chr7 (102-262)||(26371768-26371928)
chr7 (102-262)||(40753131-40753291)
chr7 (102-257)||(44748676-44748831)
chr7 (149-290)||(18386472-18386614)
chr7 (149-278)||(26652826-26652955)
chr7 (102-262)||(11321844-11322004)
chr7 (102-262)||(36769528-36769688)
chr7 (135-262)||(30849238-30849365)
chr7 (136-278)||(34295397-34295539)
chr7 (136-262)||(47953166-47953292)
chr7 (102-262)||(21784847-21785007)
chr7 (102-262)||(26994184-26994344)
chr7 (102-262)||(29661299-29661459)
chr7 (136-283)||(329425-329572)
chr7 (136-262)||(46633673-46633799)
chr7 (149-290)||(23349297-23349438)
chr7 (102-262)||(10932516-10932676)
chr7 (177-269)||(29992729-29992820)
chr7 (102-262)||(47316657-47316817)
chr7 (135-262)||(18470660-18470787)
chr7 (102-262)||(41211159-41211320)
chr7 (149-290)||(30599014-30599156)
chr7 (135-273)||(38301308-38301445)
chr7 (136-278)||(48699358-48699500)
chr7 (136-272)||(29372772-29372908)
chr7 (135-290)||(32873761-32873917)
chr7 (122-262)||(48894693-48894833)
chr7 (135-273)||(1870099-1870238)
chr7 (151-290)||(9913473-9913612)
chr7 (151-290)||(9927161-9927300)
chr7 (193-288)||(41903604-41903699)
chr7 (135-290)||(43368149-43368304)
chr7 (136-254)||(3922696-3922814)
chr7 (136-262)||(17237052-17237178)
chr7 (156-254)||(21133356-21133454)
chr7 (173-262)||(47947736-47947825)
chr7 (102-262)||(22724490-22724650)
chr7 (102-262)||(43158645-43158805)
chr7 (135-262)||(3892018-3892145)
chr7 (135-278)||(41665567-41665710)
chr7 (149-254)||(22631722-22631827)
chr7 (149-290)||(34117400-34117541)
chr7 (149-278)||(43213931-43214060)
chr7 (149-262)||(46408865-46408978)
chr7 (149-262)||(46448650-46448763)
chr7 (136-262)||(43189235-43189362)
chr7 (149-290)||(1363585-1363725)
chr7 (149-254)||(20127273-20127378)
chr7 (137-258)||(30052925-30053046)
chr7 (149-262)||(46627146-46627259)
chr7 (174-278)||(30259938-30260042)
chr7 (102-218)||(34519528-34519644)
chr7 (174-238)||(42332059-42332123)
chr7 (213-272)||(3359911-3359970)
chr7 (181-259)||(44668786-44668865)
chr7 (102-283)||(37966929-37967110)
chr7 (192-258)||(8083785-8083847)
chr7 (174-262)||(21408331-21408419)
chr7 (102-218)||(26910369-26910485)
chr7 (174-289)||(29455880-29455992)
chr7 (136-272)||(35645413-35645548)
chr7 (180-268)||(38360041-38360129)
chr7 (140-235)||(42072995-42073090)
chr7 (152-262)||(21408635-21408744)
chr7 (149-273)||(11250587-11250706)
chr7 (199-255)||(45063622-45063678)
chr7 (199-254)||(16963092-16963147)
chr7 (135-290)||(22724024-22724179)
chr7 (148-230)||(7958634-7958715)
chr7 (164-272)||(12098381-12098489)
chr7 (102-202)||(16963174-16963274)
[»] scaffold0169 (2 HSPs)
scaffold0169 (102-262)||(18018-18178)
scaffold0169 (135-262)||(12533-12660)
[»] chr6 (54 HSPs)
chr6 (102-262)||(10324108-10324268)
chr6 (106-288)||(7396127-7396306)
chr6 (135-289)||(10485102-10485256)
chr6 (135-273)||(32409882-32410020)
chr6 (102-290)||(2614839-2615028)
chr6 (102-262)||(17443234-17443394)
chr6 (135-262)||(3932837-3932964)
chr6 (149-262)||(17867807-17867920)
chr6 (149-262)||(17877590-17877703)
chr6 (149-273)||(24242625-24242749)
chr6 (135-290)||(10959944-10960099)
chr6 (135-262)||(11613821-11613948)
chr6 (102-272)||(29054319-29054488)
chr6 (136-262)||(34176802-34176928)
chr6 (109-262)||(18057491-18057644)
chr6 (102-262)||(14925453-14925613)
chr6 (135-262)||(3259655-3259782)
chr6 (135-262)||(24203335-24203461)
chr6 (175-273)||(7365348-7365446)
chr6 (135-245)||(9902688-9902798)
chr6 (149-290)||(31870144-31870285)
chr6 (135-262)||(11279100-11279227)
chr6 (135-262)||(15277310-15277437)
chr6 (135-262)||(32132410-32132537)
chr6 (102-258)||(11382040-11382194)
chr6 (149-257)||(34684027-34684136)
chr6 (149-273)||(166967-167091)
chr6 (136-254)||(3379690-3379808)
chr6 (148-290)||(18597201-18597343)
chr6 (149-254)||(8177925-8178030)
chr6 (102-262)||(15276934-15277094)
chr6 (102-278)||(32860007-32860183)
chr6 (151-262)||(11212229-11212340)
chr6 (139-262)||(16542309-16542432)
chr6 (149-238)||(4494159-4494248)
chr6 (193-272)||(29424655-29424734)
chr6 (193-259)||(8844422-8844488)
chr6 (174-264)||(9613944-9614034)
chr6 (164-290)||(27756249-27756375)
chr6 (153-291)||(27824698-27824836)
chr6 (136-290)||(35004159-35004313)
chr6 (135-271)||(3290635-3290769)
chr6 (136-289)||(5650735-5650888)
chr6 (149-262)||(14808045-14808157)
chr6 (202-258)||(32614035-32614091)
chr6 (174-256)||(15400654-15400736)
chr6 (174-256)||(15412441-15412523)
chr6 (174-256)||(15428035-15428117)
chr6 (222-262)||(10552749-10552789)
chr6 (222-288)||(13412644-13412710)
chr6 (222-283)||(29203043-29203104)
chr6 (194-262)||(6208981-6209049)
chr6 (174-230)||(8570257-8570313)
chr6 (175-258)||(28068787-28068868)
[»] scaffold0208 (1 HSPs)
scaffold0208 (102-273)||(2302-2473)
[»] chr3 (65 HSPs)
chr3 (102-269)||(3964255-3964421)
chr3 (136-290)||(31883008-31883162)
chr3 (148-289)||(3867647-3867788)
chr3 (125-262)||(53557770-53557907)
chr3 (102-262)||(28675763-28675923)
chr3 (102-262)||(39052790-39052950)
chr3 (102-290)||(51925160-51925348)
chr3 (135-273)||(20609633-20609771)
chr3 (149-262)||(1344706-1344819)
chr3 (102-262)||(2135043-2135203)
chr3 (136-252)||(8648543-8648659)
chr3 (102-262)||(34351320-34351480)
chr3 (149-257)||(42636402-42636510)
chr3 (102-262)||(44116912-44117072)
chr3 (102-262)||(51259732-51259892)
chr3 (135-278)||(33364763-33364906)
chr3 (135-262)||(47958417-47958544)
chr3 (135-257)||(38213332-38213454)
chr3 (150-272)||(44000224-44000346)
chr3 (136-262)||(49748897-49749023)
chr3 (112-262)||(54622758-54622908)
chr3 (136-273)||(34026629-34026766)
chr3 (150-262)||(5442264-5442376)
chr3 (102-262)||(12349123-12349283)
chr3 (135-290)||(40094447-40094603)
chr3 (174-278)||(41694925-41695029)
chr3 (135-262)||(20255018-20255144)
chr3 (135-262)||(21221345-21221472)
chr3 (135-262)||(26282372-26282499)
chr3 (135-262)||(29584848-29584975)
chr3 (149-262)||(4851455-4851568)
chr3 (136-257)||(25860407-25860528)
chr3 (149-254)||(29646047-29646152)
chr3 (102-262)||(3864627-3864786)
chr3 (102-262)||(24571254-24571414)
chr3 (135-255)||(25927312-25927432)
chr3 (136-278)||(25954408-25954549)
chr3 (136-237)||(14155447-14155547)
chr3 (102-218)||(19906779-19906895)
chr3 (102-272)||(51296544-51296714)
chr3 (149-262)||(50386455-50386568)
chr3 (148-290)||(28624918-28625059)
chr3 (180-262)||(32621842-32621924)
chr3 (149-218)||(21373947-21374016)
chr3 (199-283)||(389396-389479)
chr3 (174-262)||(3695316-3695404)
chr3 (187-278)||(10747174-10747266)
chr3 (135-218)||(50678815-50678898)
chr3 (177-259)||(44267718-44267800)
chr3 (148-286)||(49107135-49107273)
chr3 (199-272)||(25395577-25395650)
chr3 (148-272)||(8067055-8067179)
chr3 (202-290)||(16145873-16145961)
chr3 (102-278)||(22484695-22484871)
chr3 (182-245)||(19190653-19190716)
chr3 (135-218)||(24721502-24721585)
chr3 (201-256)||(32538586-32538641)
chr3 (190-272)||(47041559-47041644)
chr3 (178-256)||(51813371-51813449)
chr3 (173-262)||(45690924-45691012)
chr3 (201-262)||(53046692-53046753)
chr3 (213-273)||(30258835-30258895)
chr3 (174-262)||(27176417-27176504)
chr3 (174-238)||(36772017-36772081)
chr3 (180-228)||(39215499-39215547)
[»] scaffold0155 (1 HSPs)
scaffold0155 (148-272)||(33554-33678)
[»] scaffold0650 (1 HSPs)
scaffold0650 (136-290)||(1641-1795)
[»] scaffold0098 (1 HSPs)
scaffold0098 (136-273)||(51400-51536)
[»] scaffold0025 (1 HSPs)
scaffold0025 (149-278)||(5451-5580)
[»] scaffold0280 (1 HSPs)
scaffold0280 (102-278)||(13651-13827)
[»] scaffold0014 (1 HSPs)
scaffold0014 (136-262)||(101921-102047)
[»] scaffold0004 (1 HSPs)
scaffold0004 (136-262)||(372962-373088)
[»] scaffold0054 (2 HSPs)
scaffold0054 (136-287)||(19854-20005)
scaffold0054 (136-262)||(23549-23673)
[»] scaffold0360 (2 HSPs)
scaffold0360 (148-262)||(13589-13703)
scaffold0360 (136-273)||(15379-15512)
[»] scaffold0027 (1 HSPs)
scaffold0027 (136-262)||(15144-15270)
[»] scaffold0021 (2 HSPs)
scaffold0021 (136-272)||(108303-108436)
scaffold0021 (136-272)||(111073-111206)
[»] scaffold0957 (1 HSPs)
scaffold0957 (102-290)||(2460-2648)
[»] scaffold0062 (1 HSPs)
scaffold0062 (192-272)||(3682-3762)
[»] scaffold0729 (1 HSPs)
scaffold0729 (114-262)||(4555-4703)
[»] scaffold0077 (1 HSPs)
scaffold0077 (136-262)||(7456-7586)
[»] scaffold0050 (1 HSPs)
scaffold0050 (137-262)||(42949-43073)
[»] scaffold0236 (1 HSPs)
scaffold0236 (196-272)||(19784-19860)
[»] scaffold0006 (1 HSPs)
scaffold0006 (199-254)||(99841-99897)


Alignment Details
Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 842313 - 842193
Alignment:
Q  25 ggtagcatgaataacggtgaattcaatttcagtcataaaatgcatctctattaaatttagggtgtttgatttataacttcagggacatgacaaattagat 124  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  842313 ggtagcatgaataacggtgaattcaaattcaatcataaaatgcatctctgttaaatttagggtgtttgatttataacttcagggacatgacaaactagat 842214  T
Q  125 gcaatggattggacaaaaact 145  Q
    |||||||||||| ||||||||    
T  842213 gcaatggattgggcaaaaact 842193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 289
Target Start/End: Complemental strand, 3649738 - 3649584
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||| ||||||||||  ||| |||| ||||    
T  3649738 ggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaa 3649639  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||| | ||||| |||| ||||||||||| | |||||||| |||||||||| ||||    
T  3649638 aaaacatataaaacaagaaattattcaataccataaaaatttgtgatgtgctgtt 3649584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 33552793 - 33552953
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| ||||||| |||   ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  33552793 ttcaggtacaggacaaattggatgcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 33552892  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  33552893 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 33552953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 23522015 - 23521855
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||| |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  23522015 ttcaggtacaggacaaactggaagcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 23521916  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  23521915 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 23521855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 44324293 - 44324481
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| ||||  ||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  44324293 ttcaggtacaggacaaactagaggcaaaagacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 44324392  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    | | |||||||||||||   ||| |||| ||||||||||||||| ||||||||||||||||   |||||||| |||| ||||| |||||    
T  44324393 ttttaaataccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttc 44324481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 50727864 - 50728024
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |  | |||| |||  |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||    
T  50727864 ttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttg 50727963  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||    
T  50727964 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 50728024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 50735878 - 50736038
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |  | |||| |||  |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||    
T  50735878 ttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttg 50735977  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||    
T  50735978 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 50736038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 273
Target Start/End: Complemental strand, 21580161 - 21579990
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| |||||||||    
T  21580161 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaaattg 21580062  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||||||   | ||||||  |||||||||||||| || |||||||| |||| | ||||||||    
T  21580061 tctaaaataccaaaatagcatgttgtccctcaaaaatcgtataaaactaaaaattactcaataccataaaaa 21579990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 43641201 - 43641074
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  43641201 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 43641102  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  43641101 aaatcgtataaaacaaaaaattactcaa 43641074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 22318381 - 22318522
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    |||||||||||||||| ||| |||  ||||||||||||||  || || || |||||||||| ||||||||||  |||||||  ||||||||| ||||| |    
T  22318381 aatttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtctaaaacaccaaaataacattttgtcatccaaaaatcatataaaa 22318480  T
Q  248 caaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||| ||||||||||| |||||||||| |||| ||||||||||    
T  22318481 caagaaattattcaatatcataaaaatttgtcatgtgttgtt 22318522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 32181387 - 32181238
Alignment:
Q  113 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 212  Q
    |||||| ||||||||| |||  |||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| ||||||||||||||    
T  32181387 gacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaatacc 32181288  T
Q  213 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||   ||| |||| |||||||| |||||| ||| ||||||||||||    
T  32181287 aaaatagcatttcgtcccccaaaaatagtataaaacataaaattattcaa 32181238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 9807290 - 9807131
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||||||||||||  |||||||||||  | ||||||||| |||| ||| ||| | |||||||||||||  || ||||| |||    
T  9807290 ttcaggtacaagacaaactagatgcaatggacaggacaaaaactcaactttttgtcc-tcaccaaaccacagtacaactttttgtcctacgtacaagttg 9807192  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||| |||| ||||||||||||||| ||| ||||||||||||    
T  9807191 tctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaa 9807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 33176983 - 33177143
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| |||  |||| |||    
T  33176983 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttg 33177082  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| ||| ||||||| ||||    
T  33177083 tctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaa 33177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 273
Target Start/End: Original strand, 47642489 - 47642613
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||||||||||||| ||    
T  47642489 atttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaac 47642588  T
Q  249 aaaaaattattcaacatcataaaaa 273  Q
    ||||||||||||||  |||||||||    
T  47642589 aaaaaattattcaatgtcataaaaa 47642613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 55594020 - 55593860
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||| ||| | || |||| |||  |||||||||||   ||||| ||||||||| ||| ||| |||||||||||| || ||| ||||| |||    
T  55594020 ttcaggtacatgataaactggaggcaagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttg 55593921  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||| ||||    
T  55593920 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 55593860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 1231414 - 1231291
Alignment:
Q  134 tggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 233  Q
    ||||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||| ||||||||  ||||||||  ||    
T  1231414 tggacaaaaactcatatttttgtccctcacaaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctca 1231315  T
Q  234 aaaatcgtataagacaaaaaatta 257  Q
    |||||||||||| |||||| ||||    
T  1231314 aaaatcgtataaaacaaaatatta 1231291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 24002474 - 24002313
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  24002474 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 24002375  T
Q  202 tctaaaataccaaaata--atcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||  || ||||||||  |||||||||||||| ||||||||||| ||||    
T  24002374 tctaaaataccaaaatagcat-ttttgtccctcaaaaatcgtataaaacaaaaaattactcaa 24002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 36886067 - 36885912
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||||||||| || ||| |||||||||    
T  36886067 ttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattg 36885968  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    ||||||||||| |||||   ||||||||  |||||||||||||| |||||||||||    
T  36885967 tctaaaatacctaaatagcattttgtccctcaaaaatcgtataaaacaaaaaatta 36885912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 290
Target Start/End: Complemental strand, 37865854 - 37865699
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| |||||||  |||||||||||||| ||  ||||| ||||||||||||||||||||   ||||||||  || |    
T  37865854 gacaaaaactcatatttttgtccctcaccaaatcacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtccctcaga 37865755  T
Q  236 aatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    |||||||||| ||||||||||||||||   ||| ||||| |||| |||||||||||    
T  37865754 aatcgtataaaacaaaaaattattcaatgccataaaaaaattgtcatgtgttgttc 37865699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 2725117 - 2725254
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  2725117 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc-cacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 2725215  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||||| ||||||||||| ||||  |||||||||    
T  2725216 aaatcgtataaaacaaaaaattactcaatgtcataaaaa 2725254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 279
Target Start/End: Complemental strand, 41711935 - 41711805
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||  ||||||||||||||||||||   ||| |||| ||||| ||||||||| ||    
T  41711935 atttttgtccctcaccaaaccacagtacaactttttgtctcacgtacaggttgtctaaaataccaaaatagcatttcgtcccccaaatatcgtataaaac 41711836  T
Q  249 aaaaaattattcaacatcataaaaacttgtg 279  Q
    |||||||||||||| | |||||||| |||||    
T  41711835 aaaaaattattcaatagcataaaaatttgtg 41711805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 29785535 - 29785648
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||| ||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  29785535 atttttgtccctcaccaaaccacaacacagctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 29785634  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||||||||    
T  29785635 aaaaaattattcaa 29785648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 290
Target Start/End: Complemental strand, 41720903 - 41720790
Alignment:
Q  177 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaactt 276  Q
    ||||||||||| ||| |||||||| |||||||||| |||||||| |||||||||| |||||| ||||||||| ||||||||| ||| ||||| |||  ||    
T  41720903 aactttttgtcccacgtacaaattatctaaaatacaaaaataattttttgtccacaaaaaatagtataagactaaaaattatacaatatcattaaagttt 41720804  T
Q  277 gtgatgtgttgttc 290  Q
    || |||||||||||    
T  41720803 gtcatgtgttgttc 41720790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 56154709 - 56154596
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||| ||||| ||    
T  56154709 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaac 56154610  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  56154609 aaaaaattactcaa 56154596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 24210454 - 24210264
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||| ||||||||||| ||| ||| |||||||||||| || ||| ||||| |||    
T  24210454 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttttatcccacgtacaagttg 24210355  T
Q  202 tctaaaataccaaaata--atcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa-acttgtgatgtgttgttc 290  Q
    |||||||||||||||||  || ||||||||  |||||||||||||| ||||||||||| |||| | ||||||| | |||| |||||||||||    
T  24210354 tctaaaataccaaaatagcat-ttttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaatatttgtcatgtgttgttc 24210264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 49152051 - 49152210
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | ||||||| |||   ||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| |||    
T  49152051 ttcaggtacaagacaaactggatgcaagggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttg 49152150  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||| ||||||||||  ||||||||| |||||||||||||| ||||||||||| ||||    
T  49152151 tctaaaa-accaaaataacattttgtccatcaaaaatcgtataaaacaaaaaattactcaa 49152210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 50178476 - 50178620
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 233  Q
    |||||||||||   |||||||| |||||  ||| ||| |||||||||||| ||| ||| ||||| |||||||||||| |||||||   |||||||| |||    
T  50178476 ggacaaaaactgatatttttgtgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccccca 50178575  T
Q  234 aaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||||| ||||||||||||||||  ||||||||| ||||    
T  50178576 aaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 50178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 9512324 - 9512451
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  9512324 ggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 9512423  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||| ||||||||||| ||||    
T  9512424 aaatcatataaaacaaaaaattactcaa 9512451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 20802515 - 20802642
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  20802515 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 20802614  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||| ||||||||||| ||||    
T  20802615 aaatcatataaaacaaaaaattactcaa 20802642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 38812655 - 38812500
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  38812655 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 38812556  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||||||||||   |||||| |  |||||||||||||| |||||||||||    
T  38812555 tctaaaataccaaaatagcattttgttccgcaaaaatcgtataaaacaaaaaatta 38812500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 52949822 - 52949680
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  52949822 ggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 52949723  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||| || |||||||||||||  ||||||||| ||||    
T  52949722 aaatcgtataaaac-aaaaattattcaatgtcataaaaatttgt 52949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 55065317 - 55065444
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  |||    
T  55065317 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccttcaa 55065416  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  55065417 aaatcgtataaaacaaaaaattactcaa 55065444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 290
Target Start/End: Complemental strand, 29616234 - 29616116
Alignment:
Q  173 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaa 271  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||  ||||||||   ||||||||||||| ||||||||||| ||||   ||| |||    
T  29616234 gcacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtcccttaaaaatcgtataaaacaaaaaattactcaatgccataaaa 29616135  T
Q  272 aacttgtgatgtgttgttc 290  Q
    || |||| |||||||||||    
T  29616134 aatttgtcatgtgttgttc 29616116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 37695526 - 37695652
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||  |||||||||||| ||||||||  ||| |||| |||||    
T  37695526 gacaaaaactgatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaggttgtctaaaatatcaaaataacatttcgtcccccaaa 37695625  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||||||||    
T  37695626 aatcgtataaaacaaaaaattattcaa 37695652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 290
Target Start/End: Complemental strand, 43739562 - 43739408
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  |||| ||||||||||| ||| |||  |||||| ||||||| ||||||||| ||||||||||||  |||||||  |||| ||||| |||    
T  43739562 gacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatccacaaaa 43739463  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||| ||||||||| |||||||||| || | || ||||| || | |||||||||||    
T  43739462 aattgtataagaccaaaaattatttaataccaaaaaaatttatcatgtgttgttc 43739408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 289
Target Start/End: Original strand, 53200628 - 53200782
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    ||||||||||  |||||||||||||||| ||| ||| |||||||||||| ||| ||| ||||| |||||||||| | ||||||| | ||| ||||  |||    
T  53200628 gacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaacatcaaaatagtatttcgtccctcaa 53200727  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||||| || || |||||||||||||||| | |||||||| ||||  |||||||||    
T  53200728 aaatcatacaaaacaaaaaattattcaataccataaaaatttgttctgtgttgtt 53200782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 38486242 - 38486379
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| |||||||||||||||  || ||||| |||||||||||| |||||||   ||||||||  ||||    
T  38486242 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 38486341  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||| |||||| ||||||||||| |||||  ||||||||    
T  38486342 aatagtataaaacaaaaaattactcaacgccataaaaa 38486379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 54543113 - 54542965
Alignment:
Q  113 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 212  Q
    |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||  ||||||||||| ||| ||| ||||| ||||||||||||||    
T  54543113 gacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaactttt-gtcccacgtacaagttgtctaaaatacc 54543015  T
Q  213 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  54543014 aaaatatcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 54542965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 262
Target Start/End: Complemental strand, 2787079 - 2786939
Alignment:
Q  122 gatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatc 221  Q
    ||||||| |||  |||||||||||   |||||||||| |||||||| |||  ||||| |||||||| ||| |||||||| |||||||  |||||||||      
T  2787079 gatgcaagggacaggacaaaaactcatatttttgtccttcactaaaccacatcacaaatttttgtcccacgtacaaattatctaaaaatccaaaataaca 2786980  T
Q  222 ttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||| |||| ||||||||| ||||| ||||||||||||||||    
T  2786979 tttcgtcccccaaaaatcttataaaacaaaaaattattcaa 2786939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 44649148 - 44649301
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||  ||||| |||||||||||| |||||||   |||||||| ||||    
T  44649148 ggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 44649247  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||| ||  ||||||||||||  |||| |||| |||| |||||||||||    
T  44649248 aaatcgtataaaac--aaaattattcaatgtcatcaaaatttgtcatgtgttgttc 44649301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 46680461 - 46680621
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||||| || ||| ||| ||||||||||||||| ||| |||||||||    
T  46680461 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcacgtacaaattg 46680560  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||| ||||   ||||||||   ||||||| ||||| ||||||||||| ||||    
T  46680561 tctaaaataccataatagcattttgtccctaaaaaatcatataaaacaaaaaattactcaa 46680621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 4325926 - 4325771
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || |||| |||  ||| |||||||   ||||||||| ||||| ||| | |  |||||||||||||| ||| ||||| |||    
T  4325926 ttcaggtacatgacaaactggaggcaagggacaggagaaaaactcatatttttgtctctcacaaaaccgcaacacaactttttgtcccacgtacaagttg 4325827  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||||||||||   |||||||| |||||||||| |||| |||||||||||    
T  4325826 tctaaaataccaaaatagcattttgtcccccaaaaatcgcataaaacaaaaaatta 4325771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 842192 - 842142
Alignment:
Q  246 gacaaaaaattattcaacatcataaaaacttgtgatgtgttgttccgctct 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  842192 gacaaaaaattattcaacatcataaaaacttgtgatgtgttgttccgctct 842142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 21202841 - 21202720
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   | ||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  21202841 ggacaaaaactcataattttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcc-ccaa 21202743  T
Q  235 aaatcgtataagacaaaaaatta 257  Q
    ||||||||||| |||||||||||    
T  21202742 aaatcgtataaaacaaaaaatta 21202720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 34930017 - 34929899
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||| |||||| ||| ||| ||||||||||||| | || |||||| |||||||||||| |||||||   |||||||| ||||    
T  34930017 ggacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgccccatatacaagttgtctaaaatatcaaaatagcattttgtcccccaa 34929918  T
Q  235 aaatcgtataagacaaaaa 253  Q
    ||||||||||| |||||||    
T  34929917 aaatcgtataaaacaaaaa 34929899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 52319411 - 52319309
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||  ||||||||  ||||||||  |||||||||||||| ||    
T  52319411 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatgtcaaaataacattttgtccctcaaaaatcgtataaaac 52319312  T
Q  249 aaa 251  Q
    |||    
T  52319311 aaa 52319309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 7001952 - 7001829
Alignment:
Q  137 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 236  Q
    |||||||| | |||||||||||||||| ||| |||  |||||||||||||   |  || || ||||||||| ||||||||||| | ||||||||||||||    
T  7001952 acaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtctaaa-taccaaaataa-catttgtccaccaaaa 7001855  T
Q  237 atcgtataagacaaaaaattattcaa 262  Q
    |||||||||||| |||||||||||||    
T  7001854 atcgtataagaccaaaaattattcaa 7001829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 20518020 - 20518133
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||||||| ||| ||||| ||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||  ||||| ||    
T  20518020 atttttgtccctcaccaaatcacagcataacttcttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattctataaaac 20518119  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  20518120 aaaaaattactcaa 20518133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 36743686 - 36743799
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| |||  || ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||||| |||||| ||    
T  36743686 atttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattgtataaaac 36743785  T
Q  249 aaaaaattattcaa 262  Q
    || |||||| ||||    
T  36743786 aacaaattactcaa 36743799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 278
Target Start/End: Complemental strand, 50186616 - 50186487
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||| || ||||||||| ||||||||||||| ||||||   ||| |  | ||||||||||||||| |     
T  50186616 atttttgtccctcaccaaaccacaacacaactttttatcccacatacaagttgtctaaaatacaaaaatagcatttcgcaccccaaaaatcgtataaaat 50186517  T
Q  249 aaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||  ||||||||| ||||    
T  50186516 aaaaaattattcaatgtcataaaaatttgt 50186487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 29593030 - 29592870
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | ||||||| |||   ||||||||||   |||||||| | |||||||| ||| ||||||||||||||| |||||| || |||    
T  29593030 ttcaggtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtacttcactaaaccacagcacaactttttgtcccacataaaagttg 29592931  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||  |||||||    ||| |||| ||||||||| ||||| ||||||||||||||||    
T  29592930 tctaaaaatccaaaatggcatttcgtcccccaaaaatcatataaaacaaaaaattattcaa 29592870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 262
Target Start/End: Original strand, 7554945 - 7555068
Alignment:
Q  139 aaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    ||||||| | |||||||||| |||||||| ||   |||||||||||||| ||| ||||| ||||||||||  ||||||||   ||| | || ||||||||    
T  7554945 aaaaactcgtatttttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtctaaaaatccaaaatagcatttcggcctccaaaaat 7555044  T
Q  239 cgtataagacaaaaaattattcaa 262  Q
    ||||||| ||||||||||||||||    
T  7555045 cgtataaaacaaaaaattattcaa 7555068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 278
Target Start/End: Complemental strand, 26083440 - 26083297
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaata-ccaaaataatcttttgtccaccaa 234  Q
    ||||||||||  |||||||||||||||| ||| ||| ||| ||||||||||| ||| ||||| |||||||||| | |||||||||  ||| |||| ||||    
T  26083440 gacaaaaactgaaatttttgtccctcaccaaaccacagcataactttttgtcccacttacaagttgtctaaaacacccaaaataacatttcgtcccccaa 26083341  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||| | ||||| |||  ||||||||||| | |||||||| ||||    
T  26083340 aaagcatataaaacatgaaattattcaataccataaaaatttgt 26083297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 36497319 - 36497192
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||||||  |||||||| |||||||||||| |||||||   || |||||  |||    
T  36497319 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtccaacatacaagttgtctaaaatatcaaaatagcattctgtccctcaa 36497220  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| | ||||||||| ||||    
T  36497219 aaatcgtataaaataaaaaattactcaa 36497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 273
Target Start/End: Complemental strand, 39078796 - 39078625
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||  ||||| | || ||||  ||| |||||||| ||  |||||||||||||||| ||| |||  ||||| ||||||||  || ||| | |||    
T  39078796 ttcagggacagaacaaactggaggcaagagataggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttg 39078697  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||| ||||||||||  |||||||| ||||||||| ||||| | || ||||||||||| | ||||||||    
T  39078696 tctaaaacaccaaaataacattttgtcccccaaaaatcatataaaataagaaattattcaataccataaaaa 39078625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 14296654 - 14296572
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||| ||| ||||| |||||||||||||||||||||  |||||||  ||||||||||||||| ||||||||||| ||||    
T  14296654 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaa 14296572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 14314902 - 14314820
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||| ||| ||||| |||||||||||||||||||||  |||||||  ||||||||||||||| ||||||||||| ||||    
T  14314902 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaa 14314820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 20694473 - 20694351
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  | ||||||||||||  || ||||| ||||||||||||||||||||   |||||||| ||||    
T  20694473 ggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaataccaaaatagcattttgtcccccaa 20694374  T
Q  235 aaatcgtataagacaaaaaatta 257  Q
    ||||  ||||| |||||||||||    
T  20694373 aaattatataaaacaaaaaatta 20694351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 28115340 - 28115271
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||    
T  28115340 atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaata 28115271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 272
Target Start/End: Complemental strand, 9948030 - 9947894
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||| |||| || |||||||||||| |||   ||||||||||||| ||| ||||| || |  |||||||||||||| || ||||||||| |||    
T  9948030 gacaaaaactaaaattcttatccctcactaaaccacattacaactttttgtctcacgtacaagttattcaaaataccaaaatagtcctttgtccacaaaa 9947931  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    || | ||||| || |||| ||||| || |||||||||    
T  9947930 aaccatataaaaccaaaatttatttaatatcataaaa 9947894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 23328021 - 23327897
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccacc 232  Q
    |||||||||||   ||||||||||||||  ||| |||  ||||||||||| ||| ||| ||||| |||||||||||||||||||||  |||| | || ||    
T  23328021 ggacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccc 23327922  T
Q  233 aaaaatcgtataagacaaaaaatta 257  Q
    ||||||||||||| |||||||||||    
T  23327921 aaaaatcgtataaaacaaaaaatta 23327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 148 - 290
Target Start/End: Original strand, 45577689 - 45577829
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    |||| |||| |||| ||||| |||  |||||||||||||| ||| | ||| ||||||||||||||||||| |  |||||||||| |||||| |  |||||    
T  45577689 aattcttgttcctcgctaaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtccacaaaaaattgattaaga 45577788  T
Q  248 caaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |  |||||||||||| | |||||||  |||| |||||||||||    
T  45577789 c--aaaattattcaataccataaaactttgtcatgtgttgttc 45577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 11056143 - 11056017
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||||| || ||| |||  ||||||||| |||| ||  |||| |||||| |||||||||||||||  ||| || |  ||||    
T  11056143 gacaaaaactgatatttttgtcccttaccaaaccacaacacaactttatgtcccatgtacagattgtcaaaaataccaaaataacatttcgtgcctcaaa 11056044  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||||||||    
T  11056043 aatcgtataaaacaaaaaattattcaa 11056017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 12600987 - 12600869
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||   |||    
T  12600987 gacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaa 12600888  T
Q  236 aatcgtataagacaaaaaa 254  Q
    |||||| ||| ||||||||    
T  12600887 aatcgtttaaaacaaaaaa 12600869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 44355838 - 44355976
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 233  Q
    ||||||||| |  ||||||||||||||| |||| |||  ||||| ||||| |||  || ||||| |||| | | ||||||||||| ||||||||||| ||    
T  44355838 ggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttttgtcttacgtacaagttgtatgatataccaaaatagtcttttgtccatca 44355937  T
Q  234 aaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||||||| ||||| |||| |||||||| | |||||||    
T  44355938 aaaatcgtacaagaccaaaagttattcaatagcataaaa 44355976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 273
Target Start/End: Original strand, 47361411 - 47361531
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||||||   || |||| ||||||||||||||||||||   ||||||||   |||| |||||||| ||    
T  47361411 atttttgtccctcaccaaaccacaacacaactttttgtc---ca-acaagttgtctaaaataccaaaatagcattttgtccctaaaaattcgtataaaac 47361506  T
Q  249 aaaaaattattcaacatcataaaaa 273  Q
    ||||||||| |||| ||||||||||    
T  47361507 aaaaaattactcaatatcataaaaa 47361531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 50729527 - 50729609
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    ||||||||||  ||||||||||  |||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  50729527 gacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaata 50729609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 985326 - 985257
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||| |||| ||||||| ||||||| ||||||||||| |||||||| |||||||| |||||||||||||    
T  985326 tacaagttgtttaaaatatcaaaatagtcttttgtccagcaaaaatcatataagaccaaaaattattcaa 985257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 37932008 - 37931895
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||||||  |||||||| |||| ||||||  |||||||   ||| |||| |||||||| |||||| ||    
T  37932008 atttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaatgtcaaaatagcatttcgtcccccaaaaattgtataaaac 37931909  T
Q  249 aaaaaattattcaa 262  Q
     |||||||||||||    
T  37931908 gaaaaattattcaa 37931895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 262
Target Start/End: Complemental strand, 6776701 - 6776553
Alignment:
Q  114 acaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacca 213  Q
    ||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| || || |||||||||| | ||    
T  6776701 acaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatca 6776602  T
Q  214 aaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||   |||||||    ||||||||||||| ||||||||||| ||||    
T  6776601 aaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaa 6776553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 31445899 - 31446010
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||| ||||| |||||||| |||||||||| |||||||  |||||| ||| |||||||||| ||||  ||||||||| ||| | |||||||     
T  31445899 cacaactttttgccacacgtacaaattatctaaaatacaaaaataactttttgttcacaaaaaatcgtacaaga-taaaaattatccaataccataaaag 31445997  T
Q  274 cttgtgatgtgtt 286  Q
     |||| |||||||    
T  31445998 tttgtcatgtgtt 31446010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 56487281 - 56487356
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 255  Q
    |||||||||| | ||||| |||| ||||||||||||||||  |||||||| ||||||||| ||||| |||||||||    
T  56487281 tttttgtcacgcgtacaagttgtttaaaataccaaaataacattttgtcctccaaaaatcatataaaacaaaaaat 56487356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 37859244 - 37859346
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||| || |||| || |||| |||| ||   |||||||||||||| || |||||| |||||||||| || |||||||| |||||||||| |||    
T  37859244 gacaaaaactaaaaattttatctctcaataaaccataacacaactttttgtctcaaatacaacttgtctaaaacactaaaataattttttgtccacaaaa 37859343  T
Q  236 aat 238  Q
    |||    
T  37859344 aat 37859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 43189762 - 43189883
Alignment:
Q  150 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 249  Q
    |||||||  ||||||||| |||  ||||| |||||||| || || ||| || |||||| ||| |||||||  | |||||||| ||| |||||||||||||    
T  43189762 tttttgtgtctcactaaaccacgacacaagtttttgtcccaaatgcaagttatctaaa-tacaaaaataacttattgtccactaaatatcgtataagaca 43189860  T
Q  250 aaaaattattcaacatcataaaa 272  Q
    ||||||||||||| | |||||||    
T  43189861 aaaaattattcaataccataaaa 43189883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 2629902 - 2630019
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||   ||||||||||   ||||||||||||||| | | ||   |||||||||||||| ||| ||||| |||    
T  2629902 ttcaggtacaggacaaactagaggcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttg 2630001  T
Q  202 tctaaaataccaaaataa 219  Q
    ||||||||||||||||||    
T  2630002 tctaaaataccaaaataa 2630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 7381340 - 7381255
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| |||| | |||||||| |||||||||| |||||| | ||||||||||| |||||| ||||||  ||||||||||||||    
T  7381340 cacaactttttttcacgcgtacaaattatctaaaatacaaaaatagttttttgtccacc-aaaatcatataag--aaaaaattattcaa 7381255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 25978567 - 25978664
Alignment:
Q  107 ggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtct 204  Q
    |||||||||||||| || |||||| |  |||||||||||  |||||||||||||||| ||| ||   |||||||||||||| ||| ||||| ||||||    
T  25978567 ggacatgacaaattggaggcaatgaacaggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagttgtct 25978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 41262055 - 41261974
Alignment:
Q  181 ttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||| ||| ||||| |||||||||||| |||| || |||||||||||| | ||| |||||||||| |||| ||||||||    
T  41262055 ttttgtctcacctacaagttgtctaaaatagcaaattagtcttttgtccacaagaaaacgtataagaccaaaacttattcaa 41261974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 42772818 - 42772733
Alignment:
Q  177 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||| || || || ||||||||||||||||||  |||| ||| ||||||||| ||||| ||||||||||| ||||    
T  42772818 aactttttgtcccacgtataagttatctaaaataccaaaataacattttttcctccaaaaatcatataaaacaaaaaattactcaa 42772733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 42870073 - 42869948
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata--atcttttgtccacc 232  Q
    |||||||||||   ||||||||||||||| ||| ||| |||||||||   ||| ||| || || ||||||||||||| ||||||  || ||||||||  |    
T  42870073 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt---gtcccacgtataagttgtctaaaatacaaaaatagcat-ttttgtccctc 42869978  T
Q  233 aaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||| ||||||||||| ||||    
T  42869977 aaaaatcgtataaaacaaaaaattactcaa 42869948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 2858455 - 2858400
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  2858455 tttttgtctcacatacaaattgtctagaataccaaaataattttttggccatcaaa 2858400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 262
Target Start/End: Complemental strand, 32858408 - 32858298
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    ||||||||||||||||| ||   || ||||||||||| || ||| ||||| ||||||||| |||||||||  ||| | ||  |||||| |||||| ||||    
T  32858408 ttttgtccctcactaaaccataacataactttttgtctcaaatataaattatctaaaatatcaaaataattctttat-cattaaaaattgtataaaacaa 32858310  T
Q  251 aaaattattcaa 262  Q
    ||||||||||||    
T  32858309 aaaattattcaa 32858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 44640353 - 44640302
Alignment:
Q  222 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||| || ||||||||| ||||||||||||| ||||||||||    
T  44640353 ttttgtccaccaaagattgtataagactaaaaattattcaatatcataaaaa 44640302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 3579187 - 3579089
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccac-caaaaatcgtataagacaaaaaattattcaacatcataaa 271  Q
    ||||||||||||||  |||| ||| |||||||||||||||||||| |||||||| | |  ||||| | ||||| |  ||||||||||||| ||||||||    
T  3579187 cacaactttttgtccaacattcaagttgtctaaaataccaaaatagtcttttgttcgcaaaaaaaccttataaaaacaaaaattattcaatatcataaa 3579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 16320607 - 16320468
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||  ||| ||||||||| ||||||   |||  ||| |||||| |||||||| ||    
T  16320607 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttgcctaaaatacaaaaatagaatttcatcccccaaaactcgtataaaac 16320508  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
      ||||||||||||   |||||||| ||||  ||||||||||    
T  16320507 --aaaattattcaatgccataaaaatttgtcttgtgttgttc 16320468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 21098636 - 21098498
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca-cca 233  Q
    ||||||||| |  |||| ||||| ||||||||| |||  || ||||||||||| ||| || || ||||||||||||| |||||||  |||| ||||   |    
T  21098636 ggacaaaaattgaaattcttgtctctcactaaaccacaacataactttttgtcgcacgtaaaatttgtctaaaatactaaaataacattttctccataaa 21098537  T
Q  234 aaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||| |||| |||| ||||| || |||||||||    
T  21098536 aaaatcgtattagaccaaaagttatttaatatcataaaa 21098498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 43893662 - 43893560
Alignment:
Q  152 tttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaa 251  Q
    ||||||| |||||||| |||  ||||| |||||||| ||| | ||  || |||||||||| |||||| | |||||||||||||||||  ||||| |||||    
T  43893662 tttgtccttcactaaaccacaacacaattttttgtctcacgtgcaggttatctaaaatacaaaaatagttttttgtccaccaaaaattatataaaacaaa 43893563  T
Q  252 aaa 254  Q
    |||    
T  43893562 aaa 43893560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 52673900 - 52673810
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    |||||||||||||||||||| | |  ||||| |||||||| ||| ||  | || |||||||||| |||||||  |||||||||||||||||    
T  52673900 aatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaaaaataaatttttgtccaccaaaaat 52673810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 30942886 - 30942763
Alignment:
Q  139 aaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    |||||||  ||||| |||| ||||| ||| |||  |||||| ||||| | |||||| || |||||||||| |||||||||   |||  ||| ||||||||    
T  30942886 aaaaactgaaatttctgtctctcaccaaaccacaacacaacattttgcctcacatataagttgtctaaaacaccaaaatatcatttcatcccccaaaaat 30942787  T
Q  239 cgtataagacaaaaaattattcaa 262  Q
    | ||||| |||| |||||||||||    
T  30942786 catataaaacaagaaattattcaa 30942763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 39513497 - 39513431
Alignment:
Q  162 actaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtc 228  Q
    ||||||| || ||||||||||||||| || ||| | |||||| |||| ||||||||| |||||||||    
T  39513497 actaaataacagcacaactttttgtctcaaatatatattgtcgaaaacaccaaaatagtcttttgtc 39513431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 40792480 - 40792406
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||||||  ||  ||||| || |||||||||| ||||||   ||||||||| |||||||||||||||||    
T  40792480 cacaactttttgtttcatgtacaagttatctaaaatacaaaaatagctttttgtccatcaaaaatcgtataagac 40792406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 34559968 - 34560013
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataa 219  Q
    ||||||||||||||| ||||| || ||||||||| |||||||||||    
T  34559968 cacaactttttgtcatacatagaagttgtctaaagtaccaaaataa 34560013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 280247 - 280187
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaa 253  Q
    ||||| || |||||||||||||||||| |||||||| | |||| ||| |||||||| ||||    
T  280247 tacaagttttctaaaataccaaaataaccttttgtctatcaaacatcctataagaccaaaa 280187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 3735489 - 3735313
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || ||||||||  |||||||||||   |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  3735489 ttcaggtacatgacaaaatggaggcaatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttg 3735390  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||||  ||||||||| ||||    
T  3735389 tctaaaataccaaaataacattttgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 3735313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 40489436 - 40489309
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||  ||||||||  |||    
T  40489436 ggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtccctcaa 40489337  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    |||| |||||| ||||||||||| ||||    
T  40489336 aaattgtataaaacaaaaaattactcaa 40489309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 39918606 - 39918479
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||| ||||    
T  39918606 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcccccaa 39918507  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||| ||||||| ||||    
T  39918506 aaatcgtataaaacataaaattactcaa 39918479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 31644531 - 31644390
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||| | ||||||| ||||| ||    
T  31644531 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccctaaaaatcatataaaac 31644432  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    | ||||||||||||  ||||||||| ||||  ||||||||||    
T  31644431 ataaaattattcaatgtcataaaaatttgtcttgtgttgttc 31644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 41790459 - 41790615
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||||||||||||||||| |||||||  |||||||| ||||    
T  41790459 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatactaaaataacattttgtcccccaa 41790558  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaa-acttgtgatgtgttgttc 290  Q
    ||||||||||| ||| ||||||| ||||   ||||||| | |||| |||||||||||    
T  41790559 aaatcgtataaaacataaaattactcaatgccataaaatatttgtcatgtgttgttc 41790615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 2351779 - 2351652
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  2351779 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 2351680  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    |||||||| || ||||||||||| ||||    
T  2351679 aaatcgtacaaaacaaaaaattactcaa 2351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 32528814 - 32528687
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  32528814 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 32528715  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||||||||    
T  32528714 aaatcgtataaaacaaaaaattattcaa 32528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 32092946 - 32093133
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||| |||||||||||  ||||||||||| |||| ||| ||| ||||||||||||||| ||| ||||||||     
T  32092946 ttcaggaacaggacaaattggaggcaaaggataggacaaaaactgaaatttttgtcc-tcaccaaaccacagcacaactttttgtcccacgtacaaatta 32093044  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||||||||||||   ||| |||| ||||||||  ||||| ||| |||| | ||||| | |||||||| ||||| |||| |||||    
T  32093045 tctaaaataccaaaatagcatttcgtcccccaaaaattatataaaacataaaaattttcaataccataaaaatttgtgttgtgctgttc 32093133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 34795019 - 34794859
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| || || |||    
T  34795019 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtataagttg 34794920  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   |||||| | |||||| |||||||| ||||||||||||||||    
T  34794919 tctaaaataccaaaatagcattttgttccccaaaattcgtataaaacaaaaaattattcaa 34794859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 257
Target Start/End: Original strand, 21739125 - 21739280
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  21739125 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 21739224  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||||||||||   ||||||||  ||||||| |||||| |||||||||||    
T  21739225 tctaaaataccaaaatagcattttgtccctcaaaaattgtataaaacaaaaaatta 21739280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 273
Target Start/End: Complemental strand, 39788292 - 39788153
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataa-tcttttgtccacca 233  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||| |||||||   |||||||| |||    
T  39788292 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacatttttgtccccca 39788193  T
Q  234 aaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||| ||||||||||| |||| | ||||||||    
T  39788192 aaaatcgtataaaacaaaaaattactcaataccataaaaa 39788153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 4818138 - 4818264
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||   |||    
T  4818138 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaa 4818237  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  4818238 aatcgtataaaacaaaaaattactcaa 4818264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 24036315 - 24036176
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| |||||||||||||||||||||  |||||  | ||||||||||||||| ||    
T  24036315 atttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaataacattttgcaccccaaaaatcgtataaaac 24036216  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||  ||  ||||| |||| |||||||||||    
T  24036215 aaaaaattattcaatgtc--aaaaatttgtcatgtgttgttc 24036176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 31880073 - 31880211
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||| ||||||  || ||||| ||||||||||||||||||||   |||||||| ||||    
T  31880073 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaataccaaaatagcattttgtcccccaa 31880172  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
     |||||||||| ||||||||||||||||  |||||||||    
T  31880173 caatcgtataatacaaaaaattattcaatgtcataaaaa 31880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 4689709 - 4689850
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||| ||||||||| |||||||  ||| |  | |||||| |||||||| ||    
T  4689709 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaagtcgtataaaac 4689808  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||  ||||||||| |||| |||||||||||    
T  4689809 aaaaaattattcaatgtcataaaaatttgtcatgtgttgttc 4689850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 7208241 - 7208354
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   |||||| |  |||||||||||||| ||    
T  7208241 atttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgttcctcaaaaatcgtataaaac 7208340  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  7208341 aaaaaattactcaa 7208354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 22493417 - 22493537
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||||||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  22493417 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtctaaaatatcaaaatagcattttgtcc-gcaaa 22493515  T
Q  236 aatcgtataagacaaaaaatta 257  Q
    |||||||||| |||||||||||    
T  22493516 aatcgtataaaacaaaaaatta 22493537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 254
Target Start/End: Complemental strand, 7523304 - 7523152
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  7523304 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 7523205  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||    
T  7523204 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaa 7523152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 553495 - 553368
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccaccaa 234  Q
    ||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  |||||| || ||||    
T  553495 gacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccccccaa 553396  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||| ||||||||||||    
T  553395 aaatcgtataaaacataaaattattcaa 553368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 278
Target Start/End: Original strand, 18470426 - 18470568
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  ||||||||||||| || ||| ||| |||||||||||| || ||| ||||| |||||||||| ||||||||||  ||| |||| |||||    
T  18470426 gacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaa 18470525  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    || | ||||| |||| ||||||||||| | |||||||| ||||    
T  18470526 aagcatataaaacaagaaattattcaataccataaaaatttgt 18470568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 28090518 - 28090644
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| |||  ||  |||||||||||||| ||| ||||| ||||||||||||| |||||||  ||||||||  ||||    
T  28090518 gacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaataacattttgtccctcaaa 28090617  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  28090618 aatcgtataaaacaaaaaattactcaa 28090644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 278
Target Start/End: Original strand, 7770290 - 7770419
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| ||| ||||||||| |||||||  ||| |  | ||||||||||||||| ||    
T  7770290 atttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaac 7770389  T
Q  249 aaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||  ||||||||| ||||    
T  7770390 aaaaaattattcaatgtcataaaaatttgt 7770419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 259
Target Start/End: Complemental strand, 17031289 - 17031132
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||  ||||||| || |||| |||  ||||||||||   |||||||| |||||| |||||||| ||||||||||| ||| ||| ||||| ||     
T  17031289 ttcagggacagtacaaattggaggcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaacttttcgtcccacgtacaagtta 17031190  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 259  Q
    | |||||||| ||||||   |||||||||| ||||||| |||||||| ||||||||||    
T  17031189 tttaaaatacaaaaatagctttttgtccacaaaaaatcatataagaccaaaaattatt 17031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 41459674 - 41459561
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||  ||||||||||||||  ||| ||||| |||||||||||| ||||||||  ||||||||  |||||||||||||| ||    
T  41459674 atttttgtccctcaccaaaccagagcacaactttttgttccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaac 41459575  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  41459574 aaaaaattactcaa 41459561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 29241510 - 29241350
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||||| || |||| |||  || ||||| ||   ||||||||||||| | ||| ||| ||||||||||||||| ||| ||||| |||    
T  29241510 ttcaggtacatgacaaattggaggcaagggacaggccaaaagctcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttg 29241411  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
     |||||||| |||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  29241410 gctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 29241350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 24181621 - 24181748
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||| ||||||||||| ||| || || ||||||||||||||||||||   |||||||| ||||    
T  24181621 ggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtcccccaa 24181720  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    | ||||||||| |||| |||||| ||||    
T  24181721 agatcgtataaaacaacaaattactcaa 24181748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 8560980 - 8561133
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||| |||||| ||| |||  |||||||||||||  ||  ||||| |||||||||||||||||||||  ||| |||| |||||    
T  8560980 gacaaaaactgatatttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaataacatttcgtcc-ccaaa 8561078  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||||| ||||||||||| ||||   |||||||| |||| |||| ||||||    
T  8561079 aatcgtataaaacaaaaaattaatcaatgccataaaaatttgtcatgttttgttc 8561133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 11963439 - 11963313
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| | ||| ||||||||||||||||||||   ||||||||  ||||    
T  11963439 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtgcaagttgtctaaaataccaaaatagcattttgtccctcaaa 11963340  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| | | ||||||| ||||    
T  11963339 aatcgtataaaatacaaaattactcaa 11963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 35701376 - 35701254
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  || ||||||||||  ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  35701376 ggacaaaaactcatatttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 35701277  T
Q  235 aaatcgtataagacaaaaaatta 257  Q
    ||||||||||| |||||||||||    
T  35701276 aaatcgtataaaacaaaaaatta 35701254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 6311658 - 6311794
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||| ||||||||| |||||| | | |||  |||||||||| ||| || |||||||||||||||| ||||||||||| || ||||||||||||    
T  6311658 gacaaaaactaaaatttttgttcctcac-ataccacaacacaacttttagtcccaaatacaaattgtctaaattaccaaaataacctcttgtccaccaaa 6311756  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||   |||||||||||| | | ||||| | ||||||||    
T  6311757 aaatttataagacaaaataatgttcaataccataaaaa 6311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 40182549 - 40182436
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||  ||||| ||||||||||||||||||||   |||||||   |||||||||||||| ||    
T  40182549 atttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaac 40182450  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  40182449 aaaaaattactcaa 40182436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 700612 - 700720
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||| |||||| ||| |||  |||||||||||||| ||| ||||| || ||||||||||||||||| | |||||||| || |||||| ||||| ||    
T  700612 atttttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaatattattttgtcccccgaaaatcatataaaac 700711  T
Q  249 aaaaaatta 257  Q
    |||||||||    
T  700712 aaaaaatta 700720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 31770588 - 31770715
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||| |||||||| ||| |||  |||||||||||||| ||| ||||| |||||| |||||||||||||   ||||||||  |||    
T  31770588 ggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatagcattttgtccctcaa 31770687  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||| ||||||||||| ||||    
T  31770688 aaatcatataaaacaaaaaattactcaa 31770715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 5571655 - 5571766
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||||||  || ||||| ||||||||||||||||||||     |||||| ||||||||||||||| ||    
T  5571655 atttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaataccaaaata--gcattgtcccccaaaaatcgtataaaac 5571752  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  5571753 aaaaaattactcaa 5571766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 23091302 - 23091428
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||| |||  ||| |||  |||||||||||||| ||| || ||||||||||||||| ||||||||  ||||||||  ||||    
T  23091302 gacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttttgtctcacgtataaattgtctaaaatatcaaaataacattttgtccctcaaa 23091401  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| |||||| |||| ||||    
T  23091402 aatcgtataaaacaaaacattactcaa 23091428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 6284310 - 6284423
Alignment:
Q  150 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc-aaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||| |||||||| ||||||   ||||||||  |||||||||||||| ||    
T  6284310 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcattttgtccctcaaaaatcgtataaaac 6284409  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  6284410 aaaaaattactcaa 6284423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 27839083 - 27839180
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataa 245  Q
    |||||||||||||||| ||| ||    ||||||||||||| ||  ||||| ||||||||||||||||||||  ||||||||| |||||||||||||||    
T  27839083 aatttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaataccaaaatagccttttgtcctccaaaaatcgtataa 27839180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 5673224 - 5673121
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| |||     |||||||||| ||||||||  |||||||| ||||||||||||||| ||    
T  5673224 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtac-----gtctaaaatatcaaaataacattttgtcccccaaaaatcgtataaaac 5673130  T
Q  249 aaaaaatta 257  Q
    |||||||||    
T  5673129 aaaaaatta 5673121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 7725807 - 7725933
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||| ||| |||| |||  |||||||||||||| ||| || || |||||||||   ||||||||   ||| |||| |||||    
T  7725807 gacaaaaactcatatttttgtccttcattaaaccacaacacaactttttgtcccacgtataagttgtctaaatatccaaaatagcatttcgtcccccaaa 7725906  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||||||||    
T  7725907 aatcgtataaaacaaaaaattattcaa 7725933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 8136936 - 8136852
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataa 219  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||||||  || ||||| |||||||||||||||||||||    
T  8136936 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaataccaaaataa 8136852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 254
Target Start/End: Original strand, 22432306 - 22432425
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||  ||| |||  ||||| |||||||| ||  ||||| ||||||||||||||||||||   ||| |||| ||||    
T  22432306 ggacaaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtctaaaataccaaaatagcatttcgtcccccaa 22432405  T
Q  235 aaatcgtataagacaaaaaa 254  Q
    ||||||||||| | ||||||    
T  22432406 aaatcgtataaaaaaaaaaa 22432425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 612582 - 612520
Alignment:
Q  192 atacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    |||||| |||||||| ||||||||||| | |||||| ||||||| ||||||||||||||||||    
T  612582 atacaagttgtctaacataccaaaatactattttgttcaccaaacatcgtataagacaaaaaa 612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 35760761 - 35760622
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttt-tgtcacacatacaaattgtctaaaatac-caaaataatcttttgtccacc 232  Q
    ||||||||||   |||||||||||||| || ||||||  ||||  |||| ||| |||  |||||||  |||||||||| ||||||| | |||| |||||     
T  35760761 ggacaaaaacataaatttttgtccctcgctgaatcacaacacagtttttctgttacaggtacaaatcatctaaaatacgcaaaatagttttttatccact 35760662  T
Q  233 aaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||||||||| ||||||||||  ||||| |||||    
T  35760661 aaaaatcgtataagaccaaaaattatttgacatcgtaaaa 35760622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 8360476 - 8360395
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||| || |||||| ||||||||||||| ||||||||||||| || | ||||||| |||||  | ||||||||||||||    
T  8360476 tttttgtctcaaatacaagttgtctaaaatactaaaataatcttttatctatcaaaaat-gtatactataaaaaattattcaa 8360395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 1338661 - 1338601
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaa 253  Q
    ||||| |||||||||||| ||||||||| ||||||||| |||| ||||||||  |||||||    
T  1338661 tacaagttgtctaaaatatcaaaataattttttgtccatcaaatatcgtatataacaaaaa 1338601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 32313854 - 32313782
Alignment:
Q  218 aatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||| |  ||| ||| |||| |||||||||||    
T  32313854 aatcttttgtccagcaaaaatcgtataagatcaaaaattaatcaatactatacaaatttgtcatgtgttgttc 32313782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 5598541 - 5598495
Alignment:
Q  173 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataa 219  Q
    ||||||||||||||| ||| ||||| |||||||||||| ||||||||    
T  5598541 gcacaactttttgtctcacgtacaacttgtctaaaatatcaaaataa 5598495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 35955044 - 35954974
Alignment:
Q  204 taaaataccaaaataatcttttgtccaccaaaaa-tcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||| |||||||  |||| || |||||||| |||||| |||||||||||||||||| | ||||||||    
T  35955044 taaaatactaaaataactttttctctaccaaaaaatcgtattagacaaaaaattattcaataccataaaaa 35954974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 11090861 - 11090946
Alignment:
Q  131 gattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaa 216  Q
    |||||||| ||||||  |||| ||| ||||||||||  |||  |||||||||||||| ||| ||||  |||||||||||| |||||    
T  11090861 gattggacgaaaactgaaattcttgaccctcactaagccacgacacaactttttgtctcacgtacacgttgtctaaaatatcaaaa 11090946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 24206412 - 24206332
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccacc-aaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||| || |||||||||| |||||| |||| || ||||  ||||||||||| |||| || |||||||||||| |||||||    
T  24206412 tacaagttatctaaaatactaaaatagtcttatgcccacttaaaaatcgtatgagaccaacaattattcaacaacataaaa 24206332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 40563829 - 40563873
Alignment:
Q  234 aaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||  ||||||||||||| |||||||||| ||||    
T  40563829 aaaatcgtataagatcaaaaattattcaatatcataaaaatttgt 40563873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 273
Target Start/End: Original strand, 7761531 - 7761702
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  7761531 ttcaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttg 7761630  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||  |||||||||    
T  7761631 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaa 7761702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 16104395 - 16104246
Alignment:
Q  113 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 212  Q
    |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  16104395 gacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaatacc 16104296  T
Q  213 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16104295 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 16104246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 41366068 - 41366253
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||||||||| | || ||||  ||| |||||||||||  |||||||||||||||| ||| |||  ||||| |||||||| ||||||||| |||    
T  41366068 ttcagggacatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttg 41366167  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||||||  || | ||||| ||||||  ||||||||  |||||||||||| |||||||||| || | |||||||||||    
T  41366168 tctaaaataccaaaataacattgtatccacaaaaaattatataagac--aaaattattcaatatcataaaaa-ttatcatgtgttgttc 41366253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 136 - 281
Target Start/End: Complemental strand, 25383235 - 25383084
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcac-------acatacaaattgtctaaaataccaaaataatcttttgtc 228  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||         || |||||  |||||||||||| || |||| ||||||||    
T  25383235 gacaaaaac-agaatttttgtccctcactaaatcactgcacaactttttgtctatttgtctacgtacaagatgtctaaaatacaaatataagcttttgtc 25383137  T
Q  229 caccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgat 281  Q
    ||| |||||||||||||||||| ||||||||||| | | ||||||||||||||    
T  25383136 cacaaaaaatcgtataagacaacaaattattcaataccgtaaaaacttgtgat 25383084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 37003873 - 37003986
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| |||||||||||||||||||||||||||  ||||||||  |||||||||||||| |     
T  37003873 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaat 37003972  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||||||||    
T  37003973 aaaaaattattcaa 37003986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 5278792 - 5278952
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||| |||||||| ||| ||||| |||    
T  5278792 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattttttgtcccacgtacaagttg 5278891  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  5278892 tctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaa 5278952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 33366742 - 33366582
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||| |||||| ||| |||  ||||||||||| || ||||||||| |||    
T  33366742 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacatacaagttg 33366643  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||    
T  33366642 tctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 33366582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 2645077 - 2645204
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||||||||| ||||||||||||||||||||   |||||| |  |||    
T  2645077 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgttcctcaa 2645176  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  2645177 aaatcgtataaaacaaaaaattactcaa 2645204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 19513680 - 19513818
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  19513680 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 19513779  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||| ||||| ||||||||||| |||| | ||||||||    
T  19513780 aaatcatataaaacaaaaaattactcaataccataaaaa 19513818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 247
Target Start/End: Complemental strand, 26796337 - 26796216
Alignment:
Q  125 gcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttt 224  Q
    ||||||||| ||| ||||| || ||||| |||||||||||||| |||  | |||||||||||||||| ||||| |||||||||||||| ||||| |||||    
T  26796337 gcaatggataggataaaaattaaaatttgtgtccctcactaaagcacaacgcaactttttgtcacacgtacaagttgtctaaaatacc-aaatagtcttt 26796239  T
Q  225 tgtccaccaaaaatcgtataaga 247  Q
    ||||||||||||||| |||||||    
T  26796238 tgtccaccaaaaatcatataaga 26796216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 44284727 - 44284601
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  44284727 gacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataacaaaatagcattttgtccctcaaa 44284628  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  44284627 aatcgtataaaacaaaaaattactcaa 44284601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 32766462 - 32766651
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaatt 200  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||||||||| |||  || ||||  ||    
T  32766462 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttttgtcctacgtacaggtt 32766561  T
Q  201 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||||||||||||||  ||| |||| ||||||||||||||| ||||||||||||||||   |||||||| ||||  ||||||||||    
T  32766562 gtctaaaataccaaaataacatttcgtcctccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcctgtgttgttc 32766651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 17540814 - 17540686
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc-aaaataatcttttgtccacca 233  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||| |||||| | ||||||||  ||    
T  17540814 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaaatagtattttgtccctca 17540715  T
Q  234 aaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||| ||||||||||| ||||    
T  17540714 aaaatcgtataaaacaaaaaattactcaa 17540686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 32498047 - 32497887
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |  | |||| |||  |||||||||||   |||||||| |||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  32498047 ttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactttttgtcccacgtacaagttg 32497948  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||| ||||    
T  32497947 tctaaaataccaaaataacattttgtccttcaaaaatcgtataaaacaaaaaattactcaa 32497887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 254
Target Start/End: Complemental strand, 42706491 - 42706339
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| ||||  ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||||||||| |||    
T  42706491 ttcaggtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttg 42706392  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||    
T  42706391 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaa 42706339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 9717308 - 9717201
Alignment:
Q  150 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 249  Q
    |||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||||  |||||||||||| | |||    
T  9717308 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtatcaaaca 9717209  T
Q  250 aaaaatta 257  Q
    ||||||||    
T  9717208 aaaaatta 9717201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 35114917 - 35114762
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||| |||||||| ||| ||||| |||    
T  35114917 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttg 35114818  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||||||||||   ||||||||  |||||||||||||| |||||||||||    
T  35114817 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaatta 35114762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 9732922 - 9733048
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  9732922 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 9733021  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||||||||    
T  9733022 aatcgtataaaacaaaaaattattcaa 9733048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 273
Target Start/End: Complemental strand, 33889342 - 33889204
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||| |||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  33889342 ggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 33889243  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||| ||||| ||||||||||| |||| | ||||||||    
T  33889242 aaatcatataaaacaaaaaattactcaataccataaaaa 33889204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 7259029 - 7258868
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  7259029 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttg 7258930  T
Q  202 tctaaaataccaaaataa-tcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||   ||||||||  ||||||| |||||| ||||||||||| ||||    
T  7258929 tctaaaataccaaaataacatttttgtccctcaaaaattgtataaaacaaaaaattactcaa 7258868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 26419021 - 26418900
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||| |||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  |||| ||| |||||    
T  26419021 gacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccaaa 26418922  T
Q  236 aatcgtataagacaaaaaatta 257  Q
    ||| |||||| |||||||||||    
T  26418921 aattgtataaaacaaaaaatta 26418900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 34338942 - 34338782
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||| ||||||| ||| ||| ||||||||||||||| |||  |||| |||    
T  34338942 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactttttgtcccacgcacaagttg 34338843  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  34338842 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 34338782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 40832474 - 40832617
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| | |||||||||||||||||| | ||| |||| ||||||||||||||| ||    
T  40832474 atttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtctaaaataccaaaatagtatttcgtcccccaaaaatcgtataaaac 40832573  T
Q  249 aaaa--aattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||  ||| |||||| |  ||||||| |||| |||||||||||    
T  40832574 aaaaataataattcaataatataaaaatttgtcatgtgttgttc 40832617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 289
Target Start/End: Complemental strand, 6896300 - 6896113
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||  ||||| | || |||| |||  ||| |||||||  |||||||||||||||| |||  || ||||||||||||||| ||| ||||| |||    
T  6896300 ttcagggacaaaacaaactggaggcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttg 6896201  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||||||| |||||||||   ||| |||| ||||||  | ||||| |||| ||||||||||| | |||||||| |||| ||||||||||    
T  6896200 tctaaaacaccaaaatagcatttcgtcccccaaaaggcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgtt 6896113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 30326338 - 30326449
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    ||||||| ||| | ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||||  |||||||||||||| ||||    
T  30326338 ttttgtctctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaa 30326437  T
Q  251 aaaattattcaa 262  Q
    ||||||| ||||    
T  30326438 aaaattactcaa 30326449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 41934679 - 41934553
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  |||| |||| | |||||||| |||  ||||||||||||||  || || || |||||||||||||||||||||  ||||||||||||||    
T  41934679 gacaaaaactgaaattcttgtacttcactaaaccacaacacaactttttgtcctacgtataagttgtctaaaataccaaaataacattttgtccaccaaa 41934580  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||| ||||||||| ||||| ||||||    
T  41934579 aatcatataagacataaaatcattcaa 41934553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 4641601 - 4641488
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||| ||||| ||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||   |||||| |  |||||||||||||| ||    
T  4641601 atttttgtctctcaccaaaccacagcacaactttttgtctcacatacaagttgtttaaaataccaaaatagcattttgttcctcaaaaatcgtataaaac 4641502  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  4641501 aaaaaattactcaa 4641488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 37308787 - 37308599
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| |||||||||    
T  37308787 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattg 37308688  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||||| | ||||||||   |||||||||| || | ||||||||| ||||   ||| ||||| |||| |||||||||||    
T  37308687 tctaaaataccaaaatagtattttgtccctaaaaaatcgtaaaaca-aaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 37308599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 13829537 - 13829394
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||  ||||||||||| |||||| | |||  |||||||||||||| ||  ||||| || ||||||| |||||||||   ||| ||||  |||    
T  13829537 ggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaacaccaaaatatcatttcgtccctcaa 13829438  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||| ||||| |||||||||||||||| |||||||||| ||||    
T  13829437 aaatcatataaaacaaaaaattattcaatatcataaaaatttgt 13829394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 18278999 - 18278874
Alignment:
Q  137 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 236  Q
    |||||||||| ||||||||| ||||||||||||||  |||||||||||||| |||||||||||||| ||||||| ||        || ||||||||||||    
T  18278999 acaaaaactaaaatttttgttcctcactaaatcacgtcacaactttttgtctcacatacaaattgtataaaatagca--------ttatgtccaccaaaa 18278908  T
Q  237 atcgtataagacaaaaaattattcaacatcataaaa 272  Q
    || |||||||||  || ||||||||| |||||||||    
T  18278907 attgtataagac--aatattattcaatatcataaaa 18278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 12939292 - 12939410
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||| |||| ||| ||| |||||||||||| || ||| ||||| |||||||| ||||||||||||  |||||||| |||||    
T  12939292 gacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaataacattttgtcccccaaa 12939391  T
Q  236 aatcgtataagacaaaaaa 254  Q
    |||| ||||| ||||||||    
T  12939392 aatcatataaaacaaaaaa 12939410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 18685934 - 18685808
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||| ||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||  |||||||  ||||||||  ||||    
T  18685934 gacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatattaaaataacattttgtccctcaaa 18685835  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||| ||||| ||||||||||| ||||    
T  18685834 aatcctataaaacaaaaaattactcaa 18685808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 12672479 - 12672592
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||| ||||| || ||  ||||| ||||||||||||||||||||   |||||||| ||||||||||||||| ||    
T  12672479 atttttgtccctcaccaaaccacaacacaagtttttatcccaagtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaac 12672578  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  12672579 aaaaaattactcaa 12672592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 45463115 - 45463255
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||| ||||| ||| |||  ||||||||||||||| || |||| ||||||||||||| ||||||||  ||| |||| ||| ||||||||||| ||    
T  45463115 atttttgtcactcaccaaaccacaacacaactttttgtcatacgtacagattgtctaaaatatcaaaataacatttcgtcc-ccagaaatcgtataaaac 45463213  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||| ||    ||||||| |||| |||||||||||    
T  45463214 aaaaaattatttaatgcaataaaaatttgtcatgtgttgttc 45463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 10399828 - 10399988
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||||||||   |  |||||||||||   |||||||||| |||||||| |||  |||||||||||||| ||  || || |||    
T  10399828 ttcaggtacaggacaaactagatgcaagatacaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttg 10399927  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||  ||||||||   |||||||| |||||| |||||||| ||||||||||||||||    
T  10399928 tctaaaaatccaaaatagcattttgtcccccaaaagtcgtataaaacaaaaaattattcaa 10399988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 30798494 - 30798602
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| || |||||||||||||||||   ||||||||  |||||||||||||| ||    
T  30798494 atttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 30798593  T
Q  249 aaaaaatta 257  Q
    |||||||||    
T  30798594 aaaaaatta 30798602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 3913451 - 3913578
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   || |||||||||||| ||| |||  |||||||||||||  ||| ||||| ||||||||||||||||||||   |||||  | ||||    
T  3913451 ggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgctccccaa 3913550  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| |||||| |||||||||    
T  3913551 aaatcgtataaaacaaaatattattcaa 3913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 38623262 - 38623365
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||||||| |||||| | || ||||||||   ||||||||||  |||||||||||||||| ||| ||| ||||||||||||||| ||||||||| |||    
T  38623262 ttcagggacaggacaaacttgaggcaatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttg 38623361  T
Q  202 tcta 205  Q
    ||||    
T  38623362 tcta 38623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 2086157 - 2086015
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||  | ||| ||| | ||||||||||||  ||| ||||| |||||| ||||||||||||||  ||||||||  |||||||||||||| ||    
T  2086157 atttttgtccctacccaaaccacagtacaactttttgtttcacgtacaagttgtctgaaataccaaaataacattttgtccctcaaaaatcgtataaaac 2086058  T
Q  249 aaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    ||||||||| ||||   ||| ||||| |||| |||||||||||    
T  2086057 aaaaaattactcaatggcataaaaaatttgtcatgtgttgttc 2086015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 40692396 - 40692277
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    ||||||||||| | ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||||||||||| ||        ||||||||  |||    
T  40692396 ggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactttttgtcccacgtacaagttgtctaaaatagca--------ttttgtccctcaa 40692305  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||||||||    
T  40692304 aaatcgtataaaacaaaaaattattcaa 40692277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 27462807 - 27462946
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||| |||| |||||| |||||| ||||||||||||||   ||| || | | |||||||||| || ||    
T  27462807 atttttgtccctcaccaaaccacaacacaactttttatcac-catacatattgtcaaaaataccaaaatagcatttcgtgccctaaaaatcgtaaaa-ac 27462904  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||  ||||| ||| |||| |||||||||||    
T  27462905 aaaaaattattcaatgtcatataaatttgtcatgtgttgttc 27462946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 18793297 - 18793379
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||| ||| ||| ||||| |||||||||||||||||||||  |||||||| |||||||| |||||| ||||||||||| ||||    
T  18793297 ttttagtctcacgtacaagttgtctaaaataccaaaataacattttgtcctccaaaaattgtataaaacaaaaaattactcaa 18793379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 272
Target Start/End: Complemental strand, 1231010 - 1230873
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    ||||||||||||   ||||||||  |||||||| |||  | |||||||||||| ||  ||||||||  ||||||||| ||||||   |||||||||||||    
T  1231010 ggacaaaaactattctttttgtctttcactaaaccacatctcaactttttgtctcatgtacaaattacctaaaatacaaaaatatctttttgtccaccaa 1230911  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
     ||| ||||| ||| ||||||||||||| || ||||||    
T  1230910 caatagtatatgaccaaaaattattcaatataataaaa 1230873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 1247232 - 1247171
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaata 210  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||| ||||| ||||||||||||    
T  1247232 atttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 11114957 - 11114844
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||| |||||| ||| |||  |||||||||||||| |||  |||| ||||||||||| |||||||| | ||| |||| | || |||||||||| ||    
T  11114957 atttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaattccaaaatagtatttcgtccgctaacaatcgtataaaac 11114858  T
Q  249 aaaaaattattcaa 262  Q
     |||||||||||||    
T  11114857 gaaaaattattcaa 11114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 20907630 - 20907533
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||||| |||||||| |||||||  |||| ||| |||||||||||| || ||||||||||||||||   |||||||| |||| || ||||||||    
T  20907630 tacaaattgtataaaatactaaaataacattttatcccccaaaaatcgtacaaaacaaaaaattattcaatgacataaaaatttgtcatatgttgttc 20907533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 35473014 - 35473146
Alignment:
Q  158 cctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||| ||||   ||| |||||||| ||| ||||| ||||||||||||||| ||||  ||||||||||  |||| | ||||||||| ||||||||    
T  35473014 cctcactaaaccactctgcaattttttgtcccacgtacaagttgtctaaaataccataatatccttttgtccataaaaatttgtataagaccaaaaatta 35473113  T
Q  258 ttcaacatcataaaaacttgtgatgtgttgttc 290  Q
    || || | ||| |||| |||| || ||||||||    
T  35473114 tttaataccatcaaaatttgtcatatgttgttc 35473146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 42365709 - 42365549
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || |||| |||   ||||||||||   |||||||||| |||  ||| |||  ||||||||||| |  |||  |||| |||    
T  42365709 ttcaggtacatgacaaactggaggcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttg 42365610  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  |||||||| | ||||||| ||||| ||||||||||| ||||    
T  42365609 tctaaaataccaaaataacattttgtcccctaaaaatcatataaaacaaaaaattactcaa 42365549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 16177888 - 16177991
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||| || || ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||    ||| |||| ||||||||||||||| ||    
T  16177888 atttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatggaatttcgtcccccaaaaatcgtataaaac 16177987  T
Q  249 aaaa 252  Q
    ||||    
T  16177988 aaaa 16177991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 28824548 - 28824703
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| | ||| ||||||||||||| ||||||   ||| |  | ||||    
T  28824548 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatctcacgtgcaagttgtctaaaatactaaaatagcatttcgcaccccaa 28824647  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||| |||||| ||||||| |||||| |  ||||||||| |||| |||| ||||||    
T  28824648 aaattgtataaaacaaaaatttattccatgtcataaaaatttgtcatgtattgttc 28824703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 38993062 - 38993189
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||| ||||||||| ||||   ||| |||  |||||||||||||| ||| ||||| ||||||||||||| ||||||   ||| |||  ||||    
T  38993062 ggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaa 38993161  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||  ||||| ||| ||||||||||||    
T  38993162 aaataatataatacagaaaattattcaa 38993189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 39461401 - 39461286
Alignment:
Q  150 tttttgtccctcactaaatcactgca---caactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataag 246  Q
    |||||||||||||| |||||||  ||   ||||||||| || ||| |||||  |||||||||||||||||||   ||||||||  ||||||||||||||     
T  39461401 tttttgtccctcaccaaatcacaacaacacaactttttatctcacgtacaagctgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaa 39461302  T
Q  247 acaaaaaattattcaa 262  Q
    | ||||||||| ||||    
T  39461301 ataaaaaattactcaa 39461286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 7294427 - 7294506
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 259  Q
    |||||||| ||| ||||| ||||  |||||||||||||| |||||| | |||||||| || ||||||||||||| |||||    
T  7294427 tttttgtctcacgtacaagttgtaaaaaataccaaaatagtcttttattcaccaaaactcatataagacaaaaagttatt 7294506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 30712959 - 30712813
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaat----cactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca 230  Q
    ||||| |||||  |||||||||||||||| ||||    |||  ||||||||||| || ||| || || |||||||||| |||||||||   |||  |||     
T  30712959 ggacacaaactgaaatttttgtccctcaccaaattaaccacaacacaactttttatcccacgtagaagttgtctaaaacaccaaaatatcatttcatcc- 30712861  T
Q  231 ccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||| ||||| |||||||||||||||| | |||||||| ||||    
T  30712860 ccaaaaatcatataaaacaaaaaattattcaataccataaaaatttgt 30712813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 31148847 - 31148784
Alignment:
Q  196 aaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 259  Q
    ||||||||||||||| ||||||| | |||| |||| || |||| |||||| |||||||||||||    
T  31148847 aaattgtctaaaatatcaaaatagttttttatccaacacaaattgtataaaacaaaaaattatt 31148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 16062130 - 16062186
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaa 237  Q
    |||||||| ||||||||| |||||||||||  ||||||||  ||||||||||||||||    
T  16062130 tttttgtcccacatacaa-ttgtctaaaatgacaaaataacattttgtccaccaaaaa 16062186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 26981701 - 26981781
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaa 216  Q
    ||||||||||   ||||||||||||||| ||| |||  || ||||||||||   || ||||| ||||||||||||||||||    
T  26981701 gacaaaaactcatatttttgtccctcaccaaaccacaacaaaactttttgttctacgtacaagttgtctaaaataccaaaa 26981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 17327715 - 17327853
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||  |||||||| ||||||||||||||||||| |||||||| ||||    
T  17327715 ggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtctcatgtacaaattatctaaaataccaaaataatattttgtcccccaa 17327814  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||||| |||| |||||| |||||  ||||||||    
T  17327815 aaatcgtataaaacaacaaattactcaacgccataaaaa 17327853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 39282024 - 39281848
Alignment:
Q  113 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 212  Q
    |||||| ||||||||| |||  |||||||||||   ||||||||||||||| ||| ||| | |||||||||||||  || ||||| ||||||||||||||    
T  39282024 gacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaatacc 39281925  T
Q  213 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    |||||||  ||| |||| ||||||||||||||| ||| ||||||||||||  ||||| ||| |||| ||||||||||    
T  39281924 aaaataacatttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaagttgtcatgtgttgtt 39281848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 38663226 - 38663085
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| ||||||||  ||||||||  |||||||||||||| ||    
T  38663226 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaac 38663127  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||  ||||||||| ||||  ||||||||||    
T  38663126 aaaaaattattcaatgtcataaaaatttgtcctgtgttgttc 38663085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 844757 - 844917
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  844757 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 844856  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  844857 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 844917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 16476188 - 16476348
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| ||||||||| |||  ||| |||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  16476188 ttcaggtacaggacaaactagatgcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttg 16476287  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   |||||||| |||||||| |||||| ||| ||||||||||||    
T  16476288 tctaaaataccaaaatagcattttgtcccccaaaaattgtataaaacataaaattattcaa 16476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 26118248 - 26118408
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||| || || |||    
T  26118248 ttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttg 26118347  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||||||||    
T  26118348 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 26118408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 136 - 278
Target Start/End: Original strand, 11772699 - 11772841
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| |||||||||| | ||||||||||||| | ||| |||| |||||    
T  11772699 gacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgttttaaataccaaaatagtatttcgtcccccaaa 11772798  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||| ||||||||| |||||| | |||||||| ||||    
T  11772799 aatcgtataaaacaaaaaataattcaaaaccataaaaatttgt 11772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 15539972 - 15540110
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    |||||||  |||| ||| ||| |||||||||||||||| || || || |||||||||| ||||||||||  |||||||| ||||||||| ||||| ||||    
T  15539972 ttttgtctttcaccaaaccacagcacaactttttgtcatacgtagaagttgtctaaaacaccaaaataacattttgtcccccaaaaatcatataaaacaa 15540071  T
Q  251 aaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    |||||||||||| | ||||||||||||| ||||||||||    
T  15540072 aaaattattcaataccataaaaacttgtcatgtgttgtt 15540110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 13994108 - 13994296
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||| |||||||||||||| || |||| | | ||||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||  ||||| |||    
T  13994108 ttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttg 13994207  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcata-aaaacttgtgatgtgttgttc 290  Q
    |||||||||||||||||   ||| |||| ||||||||| ||||| ||| |||||||||||| |||||| |||| ||||  ||||||||||    
T  13994208 tctaaaataccaaaatagcatttcgtcc-ccaaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgttgttc 13994296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 1601267 - 1601159
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||||||||||||||| || ||    
T  1601267 atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccaccaaaaatcgtacaaaac 1601168  T
Q  249 aaaaaatta 257  Q
    |||||||||    
T  1601167 aaaaaatta 1601159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 16386995 - 16386835
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  16386995 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 16386896  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16386895 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 16386835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 42510633 - 42510506
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||| ||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  42510633 ggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 42510534  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||||||||    
T  42510533 aaatcgtataaaacaaaaaattattcaa 42510506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 6711079 - 6711239
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||| |||||||| ||| ||||| |||    
T  6711079 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttg 6711178  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  6711179 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 6711239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 6771506 - 6771338
Alignment:
Q  105 agggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtct 204  Q
    |||||||||| ||||||||  ||| |||   ||||||||||| |||| ||||| |||||||||||||  ||||||||||| || ||||||||| ||| ||    
T  6771506 agggacatgataaattagagacaagggacaagacaaaaactaaaattcttgtcactcactaaatcacaacacaactttttctcccacatacaagttgact 6771407  T
Q  205 aaaataccaaaataatcttttgtcca-ccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||| ||||||||| |||||||||   |||||||||||||||| ||  ||||||||| | |||||||    
T  6771406 aaaatatcaaaataatattttgtccataaaaaaatcgtataagactaagtattattcaataccataaaa 6771338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 16451268 - 16451108
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||||||||| |||    
T  16451268 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttg 16451169  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16451168 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 16451108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 31004225 - 31004113
Alignment:
Q  150 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 249  Q
    |||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||| | ||| |||| ||||||||| ||||| |||    
T  31004225 tttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtatttcgtcccccaaaaatcctataaaaca 31004126  T
Q  250 aaaaattattcaa 262  Q
    |||||||||||||    
T  31004125 aaaaattattcaa 31004113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 6029367 - 6029510
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||| ||||||||||  ||| |||| ||||    
T  6029367 ggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaa 6029466  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||| | ||||| |||| ||||||||||| | |||||||| ||||    
T  6029467 aaagcatataaaacaagaaattattcaataccataaaaatttgt 6029510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 28340370 - 28340496
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  28340370 gacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 28340469  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  28340470 aatcgtataaaacaaaaaattactcaa 28340496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 30105746 - 30105868
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||| ||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  30105746 ggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 30105845  T
Q  235 aaatcgtataagacaaaaaatta 257  Q
    ||||||||||| |||||||||||    
T  30105846 aaatcgtataaaacaaaaaatta 30105868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 45490942 - 45491068
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  45490942 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 45491041  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  45491042 aatcgtataaaacaaaaaattactcaa 45491068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 262
Target Start/End: Complemental strand, 16437492 - 16437343
Alignment:
Q  113 gacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacc 212  Q
    |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| |    
T  16437492 gacaaactagaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatc 16437393  T
Q  213 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  16437392 aaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaa 16437343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 114 - 262
Target Start/End: Complemental strand, 10384496 - 10384348
Alignment:
Q  114 acaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacca 213  Q
    ||||||| ||||||| |||   ||||||||||   |||||||||| |||||||| ||| ||||||||||||||| ||| |||||||| |||||||   ||    
T  10384496 acaaattggatgcaaaggacaagacaaaaactcatatttttgtccttcactaaaccacagcacaactttttgtcccacgtacaaattatctaaaaattca 10384397  T
Q  214 aaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||  ||| |||| ||||||||| ||||| ||||||||||||||||    
T  10384396 aaataacatttcgtcccccaaaaatcttataaaacaaaaaattattcaa 10384348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 273
Target Start/End: Complemental strand, 46154970 - 46154870
Alignment:
Q  173 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||||||| ||||| ||||||||||||||||  ||||||||    
T  46154970 gcacaactttttgtcccacttacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcttataaaacaaaaaattattcaatgtcataaaa 46154871  T
Q  273 a 273  Q
    |    
T  46154870 a 46154870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 50382459 - 50382607
Alignment:
Q  125 gcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttt 224  Q
    ||||||||  |||||||||||  ||||||||||| |||| ||| |||  |||||||||||||| ||| ||||| |||||||||| || |||||||  |||    
T  50382459 gcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaataacattt 50382558  T
Q  225 tgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||  |||||||| ||||| |||||| ||||||||| | ||||||||    
T  50382559 tgtccctcaaaaatcatataaaacaaaatattattcaataccataaaaa 50382607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 12890346 - 12890219
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||| |||||||||||   ||||||||  |||    
T  12890346 ggacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaagttgtctaagataccaaaatagcattttgtccctcaa 12890247  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  12890246 aaatcgtataaaacaaaaaattactcaa 12890219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 16704820 - 16704713
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||||| || ||| |||  ||||||| |||||| ||||||||| ||||||||||||||||||||   |||||||| ||||||||||||||| ||    
T  16704820 atttttgtcccttaccaaaccacatcacaactctttgtctcacatacaagttgtctaaaataccaaaatagctttttgtcctccaaaaatcgtataaaac 16704721  T
Q  249 aaaaaatt 256  Q
    ||||||||    
T  16704720 aaaaaatt 16704713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 35387377 - 35387504
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||  ||| ||||| ||||||||||||||||||||   |||| |||  |||    
T  35387377 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttatccctcaa 35387476  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  35387477 aaatcgtataaaacaaaaaattactcaa 35387504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 42512836 - 42512963
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||| |||||  ||| |||  ||||||||||||||  || |||||||||||||||||| |||||||   |||||||| ||||    
T  42512836 ggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtctaaaatatcaaaatagaattttgtcccccaa 42512935  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||||||||    
T  42512936 aaatcgtataaaacaaaaaattattcaa 42512963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 17888089 - 17887899
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||| | ||| |||  |||||||||||||| ||| ||||| |||    
T  17888089 ttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttg 17887990  T
Q  202 tctaaaataccaaaataatcttttgt-ccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||||||  |||||| || ||||||||||||||| |||| |||||| ||||   ||| ||||| |||| |||||||||||    
T  17887989 tctaaaataccaaaataacattttgtccccccaaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcatgtgttgttc 17887899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 25539962 - 25539836
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| | |||||||||||||   ||| |||| |||||    
T  25539962 gacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtcccccaaa 25539863  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||||||||    
T  25539862 aatcgtataaaacaaaaaattattcaa 25539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 293
Target Start/End: Original strand, 41967916 - 41968074
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||||| || ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||  ||||||||  |||||    
T  41967916 gacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagccttttgtctcccaaa 41968015  T
Q  236 aatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttccgc 293  Q
    ||| |||||| ||||||||||| |||   |||| ||||| |||| |||| |||||||||    
T  41968016 aattgtataaaacaaaaaattactcattgtcataaaaaatttgtcatgtattgttccgc 41968074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 278
Target Start/End: Complemental strand, 50304758 - 50304616
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||||||   ||| ||| ||||||||||||||| ||| |  || |||||||||||| |||||||   |||||||| |||||    
T  50304758 gacaaaaactgatatttttgtccctctgcaaaccacagcacaactttttgtctcacgtttaagttgtctaaaatatcaaaatagcattttgtcctccaaa 50304659  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||| ||||||||||||||||  ||||||||| ||||    
T  50304658 aatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 50304616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 30798818 - 30798894
Alignment:
Q  196 aaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||| ||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  30798818 aaattatctaaaataccaaaatagtttgttgtccaccaaaaatcgtataagaccaaaaattattcaatatcataaaa 30798894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 32270461 - 32270334
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||  ||||| |||||||||||| |||||||   ||||||||  |||    
T  32270461 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtccctcaa 32270362  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||| ||||||||||| ||||    
T  32270361 aaatcatataaaacaaaaaattactcaa 32270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 272
Target Start/End: Original strand, 32289377 - 32289547
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||   ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||  ||| ||||| |||    
T  32289377 ttcaggtacaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttg 32289476  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    | |||||||||||||||   ||||||||  |||||||  ||||| ||| ||||||||||||  ||||||||    
T  32289477 tttaaaataccaaaatagcattttgtccctcaaaaattatataaaacataaaattattcaatgtcataaaa 32289547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 47092977 - 47093063
Alignment:
Q  204 taaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||| |||||||| |||||| ||| |||||||||||||| ||||||||||||||| || ||||||| |||| |||||||||||    
T  47092977 taaaatacaaaaataattttttgttcacaaaaaatcgtataaggcaaaaaattattcaatattataaaaatttgtcatgtgttgttc 47093063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 290
Target Start/End: Complemental strand, 570483 - 570339
Alignment:
Q  148 aatttttgtccctcactaaatcac--tgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataa 245  Q
    |||||||||||||||| ||| |||  |||||||||||||||| | | || || |||||||||||| ||||||||  |||| |||||||||||| ||||||    
T  570483 aatttttgtccctcaccaaaccacaatgcacaactttttgtctcgcgtataagttgtctaaaatatcaaaataacattttttccaccaaaaattgtataa 570384  T
Q  246 gacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    || |||||| ||||||  | |||||||| || |  ||||||||||    
T  570383 gataaaaaagtattcagtaccataaaaatttatcttgtgttgttc 570339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 26764861 - 26764970
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||||||||||  || |||  |||||||||||||| ||| ||||| |||||||||||||||||||||| ||| ||||  |||    
T  26764861 ggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataatatttcgtccctcaa 26764960  T
Q  235 aaatcgtata 244  Q
    ||||||||||    
T  26764961 aaatcgtata 26764970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 41973018 - 41972898
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||   ||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||| |  ||    
T  41973018 gacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcc-ctcaa 41972920  T
Q  236 aatcgtataagacaaaaaatta 257  Q
    |||||||||| |||||||||||    
T  41972919 aatcgtataaaacaaaaaatta 41972898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 44738075 - 44738263
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||||||||| || || |||| |||  |||| ||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  44738075 ttcaggtacatgacaacttggaggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 44738174  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    ||||||||| ||||||| | |||| | |  |||||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  44738175 tctaaaatagcaaaatagt-ttttattcctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 44738263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 1351501 - 1351621
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||   |||    
T  1351501 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtctctcaa 1351600  T
Q  235 aaatcgtataagacaaaaaat 255  Q
    ||||| ||||| |||||||||    
T  1351601 aaatcatataaaacaaaaaat 1351621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 6144019 - 6144195
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||| ||||||||||| | || |||| |||  |||||||||||  ||||||||||||||   ||| |||  ||||||||||| || ||| || || |||    
T  6144019 ttcagagacatgacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttg 6144118  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||| || |||||||  |||||||  ||||||||| ||||| ||| |||||||||||| | |||||||| ||||    
T  6144119 tctaaaacacaaaaataacattttgtcacccaaaaatcatataaaacagaaaattattcaataccataaaaatttgt 6144195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 7184059 - 7183899
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||||| || ||| |||  ||||||||||||||  || ||||| |||    
T  7184059 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttg 7183960  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||| ||| | |||||||   |||||||||||||| ||||||||||| ||||    
T  7183959 tctaaaataccaatatagtattttgtctctcaaaaatcgtataaaacaaaaaattactcaa 7183899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 284
Target Start/End: Complemental strand, 45658928 - 45658780
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||| | |||||||||||||   ||| |||| |||||    
T  45658928 gacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtcccccaaa 45658829  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtg 284  Q
    |||| ||||| ||||||||||||||||   |||||||| |||| |||||    
T  45658828 aatcatataaaacaaaaaattattcaaagccataaaaatttgtcatgtg 45658780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 32467910 - 32468025
Alignment:
Q  158 cctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||| ||  |||||||||||||||  || ||||| ||||||| |||| ||||||| | |||||| ||| ||||||| |||||||||||||||||    
T  32467910 cctcactaaaccaacgcacaactttttgtcctacgtacaagttgtctacaatatcaaaatagttttttgttcacaaaaaatcatataagacaaaaaatta 32468009  T
Q  258 ttcaacatcataaaaa 273  Q
     |||| | ||||||||    
T  32468010 gtcaataccataaaaa 32468025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 24339671 - 24339830
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatc-actgcacaactttttgtcacacatacaaatt 200  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| | ||  ||||||||||| || ||| ||||| ||    
T  24339671 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaactttttttcccacgtacaagtt 24339770  T
Q  201 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||     |||||| ||||| ||||||||| ||||||||||||||||    
T  24339771 gtctaaaataccaaaata--gcattgtcccccaaacatcgtataaaacaaaaaattattcaa 24339830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 51264602 - 51264476
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| |||||||| ||||||   ||||||||   |||    
T  51264602 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaatactaaaatagcattttgtcctttaaa 51264503  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  51264502 aatcgtataaaacaaaaaattactcaa 51264476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 25343289 - 25343430
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||| |||||||| ||  | ||||||||||||| ||| ||||| ||||| ||||  |||||||| | ||| ||||  ||||||||| ||||  |    
T  25343289 atttttgtccttcactaaaccatagtacaactttttgtcgcacgtacaagttgtccaaaaatccaaaatagtatttcgtccctcaaaaatcgcataaagc 25343388  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||  ||||||||| ||||  ||||||||||    
T  25343389 aaaaaattattcaatgtcataaaaatttgtcttgtgttgttc 25343430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 49303434 - 49303546
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||| |||| ||| ||| |||||| ||||| ||  || ||||| ||||||||||||| |||||||  |||||||| ||||||||||||||| ||    
T  49303434 atttttgtccttcaccaaaccacagcacaattttttatcctacgtacaagttgtctaaaatactaaaataacattttgtcc-ccaaaaatcgtataaaac 49303532  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  49303533 aaaaaattactcaa 49303546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 50540438 - 50540325
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||| |||  ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||| ||||||||| ||||| ||    
T  50540438 atttttgtccttcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcatataaaac 50540339  T
Q  249 aaaaaattattcaa 262  Q
    || |||||| ||||    
T  50540338 aacaaattactcaa 50540325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 290
Target Start/End: Complemental strand, 15324226 - 15324110
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||| ||  |  ||||||||||||||| ||||||| |  |||||||| |||| ||||||||||||||||||||||| |  | |||||||     
T  15324226 cacaactttttgtctcaactgtaaattgtctaaaatatcaaaatagtaatttgtccatcaaacatcgtataagacaaaaaattatttattaccataaaag 15324127  T
Q  274 cttgtgatgtgttgttc 290  Q
    ||| | |||||||||||    
T  15324126 cttttcatgtgttgttc 15324110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 242
Target Start/End: Complemental strand, 46447771 - 46447665
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||| ||||||| | ||||  ||||| ||  |||||||||||||  ||| ||||| || ||||||||| ||||||| ||||||||||| ||||    
T  46447771 gacaaaaactaaaatttttattcctccttaaattacatcacaactttttgttccacgtacaagttatctaaaatatcaaaatagtcttttgtccatcaaa 46447672  T
Q  236 aatcgta 242  Q
    |||||||    
T  46447671 aatcgta 46447665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 286
Target Start/End: Original strand, 504459 - 504608
Alignment:
Q  137 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 236  Q
    |||||||||  || ||||||| ||||||||| ||   ||||| |||||||| |||||| || ||||||||||||||||| ||   |||||| ||||||||    
T  504459 acaaaaactgaaaattttgtctctcactaaaccataacacaattttttgtcccacatagaagttgtctaaaataccaaagtagctttttgttcaccaaaa 504558  T
Q  237 atcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgtt 286  Q
    |||||| | ||| ||||||| | ||| | |||||||| |||  |||||||    
T  504559 atcgtagaggactaaaaattgtccaataccataaaaatttgacatgtgtt 504608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 4895434 - 4895374
Alignment:
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||| |||| ||||||||    
T  4895434 tctaaaatacaaaaataattttttgttcaccaaaaatcgtataagactaaaacttattcaa 4895374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 42705318 - 42705426
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||| ||| ||| ||||| |||||| ||||  |||||||   |||||||| ||||||||| ||||| ||    
T  42705318 atttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctgaaatgtcaaaatagcattttgtcccccaaaaatcatataaaac 42705417  T
Q  249 aaaaaatta 257  Q
    |||||||||    
T  42705418 aaaaaatta 42705426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 29032547 - 29032612
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 259  Q
    ||||||||||||||||||  |||||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  29032547 tacaaattgtctaaaataataaaataattttttgtccacc-aaaattgtataagacaaaaaactatt 29032612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 31574461 - 31574323
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatctttt-gtccaccaa 234  Q
    ||||||||||| ||||| | || |||||||| ||||  | |||||| |||||  | |||||| |||| |||||||| |||||| | |||| ||| || ||    
T  31574461 gacaaaaactaaaatttgtatctctcactaattcacaacgcaacttattgtcctatatacaagttgtttaaaatacaaaaatagttttttagtctacaaa 31574362  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||| |||| |||||||||||||||| |||| |||||    
T  31574361 aaatcgcataaaacaaaaaattattcaatatcacaaaaa 31574323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 7837274 - 7837149
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |||| |||| |||   |||||||| |  | ||||||||| | || |||||||  |||||||||||||| |||| |||| |||    
T  7837274 ttcaggaacatgacaaactagaggcaagggacatgacaaaaattgaattttttgtccattaccaaatcacatcacaactttttgtctcacagacaagttg 7837175  T
Q  202 tctaaaataccaaaataatcttttgt 227  Q
    ||||||||| ||||||| | ||||||    
T  7837174 tctaaaatatcaaaatagtattttgt 7837149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 20495006 - 20495095
Alignment:
Q  184 tgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||||| |||||| ||||||||||| ||||  |||||||||    
T  20495006 tgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatagtataaaacaaaaaattactcaatgtcataaaaa 20495095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 49799421 - 49799348
Alignment:
Q  199 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||||||||||||||||||  ||||||||||  |||||| | ||||||| ||| ||||||||| |||||||||    
T  49799421 ttgtctaaaataccaaaatagacttttgtccataaaaaattgaataagaccaaatattattcaatatcataaaa 49799348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 254
Target Start/End: Complemental strand, 5109869 - 5109718
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||    |||||||||||||| ||| |||  ||||||||||||||  |  ||||| |||    
T  5109869 ttcaggtacaagacaaattggaggcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtccaaagtacaagttg 5109770  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    ||||||||  ||||||||  |||||||| |||||||| |||||| | ||||||    
T  5109769 tctaaaat-gcaaaataacattttgtcccccaaaaattgtataaaaaaaaaaa 5109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 16862491 - 16862602
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    ||||||||||| || | ||||||| ||||||||||||||   ||||| |  |||| |||||||  |||||||  |||||| || ||||||||||| ||||    
T  16862491 aatttttgtccttcgccaaatcaccgcacaactttttgtagtacatataggttgtttaaaataataaaataacattttgtacatcaaaaatcgtacaaga 16862590  T
Q  248 caaaaaattatt 259  Q
    | ||||||||||    
T  16862591 ccaaaaattatt 16862602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 26733662 - 26733571
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt 227  Q
    ||||||||||  |||| ||||||| ||||||| ||   |||||||||||| | ||  ||||| |||||||||||||||||||| ||||||||    
T  26733662 gacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaatagtcttttgt 26733571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 34663996 - 34663913
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||||| | ||| || ||||||||||||||| ||||||||  |||||||   |||||||| ||||| |||||||||||    
T  34663996 cacaactttttgacccacttataaattgtctaaaatatcaaaataacattttgtcactcaaaaatcatataaaacaaaaaatta 34663913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 2761643 - 2761748
Alignment:
Q  156 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 255  Q
    |||||||||||| |||  ||||| |||||||| ||  |||||||| |||||||||| ||||||   |||||| || |||||||| ||||| || ||||||    
T  2761643 tccctcactaaaccacaacacaattttttgtctcaagtacaaattatctaaaatacaaaaatagatttttgt-caacaaaaatcatataaaaccaaaaat 2761741  T
Q  256 tattcaa 262  Q
    |||||||    
T  2761742 tattcaa 2761748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 34283953 - 34284039
Alignment:
Q  204 taaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||| ||||||| |||||||||||  |||||||||| ||| |||||| |||||||| | |||||||  ||||  ||||||||||    
T  34283953 taaaatatcaaaatagtcttttgtccataaaaaatcgtacaaggcaaaaacttattcaataccataaaagtttgtcttgtgttgttc 34284039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 32215347 - 32215444
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||| ||| |||||| ||||||||| | |||| |||||||||||||||||| | | ||| ||| ||||| |||||||||  |||  |||||||||||    
T  32215347 tacaagttgactaaaacaccaaaatagtgttttctccaccaaaaatcgtatatggctaaagattgttcaatatcataaaagtttgatatgtgttgttc 32215444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 7836621 - 7836565
Alignment:
Q  222 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||| | |||||| |||||||| |||||||||||||||| ||||||| |||||||    
T  7836621 ttttgtgccccaaaactcgtataaaacaaaaaattattcaatatcataataacttgt 7836565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 38087049 - 38087145
Alignment:
Q  122 gatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    |||||||||||   ||||||||||   |||||||||| |||||||| |||  |||||||||||||| ||  ||||| ||||||||||  ||||||||    
T  38087049 gatgcaatggacatgacaaaaactcatatttttgtccttcactaaaccacatcacaactttttgtcccaagtacaagttgtctaaaaatccaaaata 38087145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 47242645 - 47242716
Alignment:
Q  199 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaa 271  Q
    |||||||||||||||||||| |||||||| ||  |||||| ||||||||  ||||||||||||| ||| ||||    
T  47242645 ttgtctaaaataccaaaatagtcttttgtaca-taaaaattgtataagatcaaaaattattcaatatcgtaaa 47242716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 51703268 - 51703355
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||| ||| ||||  ||||||||||||| |||||||  |||||||| |  ||||| |||||| ||||||||||| ||||    
T  51703268 cacaactttttgtcccacctacatgttgtctaaaatacaaaaataacattttgtcc-ctcaaaatggtataaaacaaaaaattactcaa 51703355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 254
Target Start/End: Original strand, 3414919 - 3415038
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| |||  ||  || || ||||| || ||| ||| | |||| |||||||||||||||   |||||||| ||||    
T  3414919 ggacaaaaactcatatttttgtccctcaccaaactacatcataattttttatcccacgtactagttgtttaaaataccaaaatagcattttgtcccccaa 3415018  T
Q  235 aaatcgtataagacaaaaaa 254  Q
    ||||| ||||| ||||||||    
T  3415019 aaatcatataaaacaaaaaa 3415038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 16643272 - 16643331
Alignment:
Q  159 ctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    ||||| |||||||  |||||||||||||| ||||||||  ||||||||||||| ||||||    
T  16643272 ctcaccaaatcacgacacaactttttgtcccacatacaggttgtctaaaatacaaaaata 16643331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 39792902 - 39792800
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    |||| |||||| |||| ||| |||  |||||||| ||||  ||| ||||||||||||||||||  ||||||| | ||| || ||||||||| ||||||||    
T  39792902 aattcttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtctaaaataataaaataa-catttatcaaccaaaaattgtataaga 39792804  T
Q  248 caaa 251  Q
    ||||    
T  39792803 caaa 39792800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 43310377 - 43310466
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac--aaaaaattattcaa 262  Q
    ||||||||||| || |||||||||||||| ||||||| ||||||| | |||||| ||  ||||||  ||||||||  ||||||||||||||    
T  43310377 cacaactttttatctcacatacaaattgtttaaaatatcaaaatagttttttgtaca-taaaaattatataagactaaaaaaattattcaa 43310466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 40856216 - 40856111
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaatac------caaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatca 267  Q
    |||||||||||||| |||||| ||||| ||||||||||       |||||||| |||| ||||  |||||| ||||||||| |||||| |||||| || |    
T  40856216 cacaactttttgtctcacatataaattatctaaaatacaaaaataaaaataattttttatccataaaaaattgtataagaccaaaaataattcaatatga 40856117  T
Q  268 taaaaa 273  Q
    ||||||    
T  40856116 taaaaa 40856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 30105041 - 30104980
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    ||||| |||||||||||||||||||||  |||||| | | ||| ||||| ||||||||||||    
T  30105041 tacaagttgtctaaaataccaaaataacattttgttcgctaaatatcgtttaagacaaaaaa 30104980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 40610791 - 40610746
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataa 219  Q
    ||||||||||| ||||| ||| || |||||||||||||||||||||    
T  40610791 cacaactttttatcacatatataagttgtctaaaataccaaaataa 40610746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 46815816 - 46815897
Alignment:
Q  156 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaa 237  Q
    |||||||||||| ||   |||||| |||| || ||| ||| | |||||||||||||||||||||  |||||||| |||||||    
T  46815816 tccctcactaaaccatatcacaaccttttttcccacgtactagttgtctaaaataccaaaataacattttgtccgccaaaaa 46815897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 19101 - 19214
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||||||||||||| ||    
T  19101 atttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcgtataaaac 19200  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  19201 aaaaaattactcaa 19214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 262
Target Start/End: Original strand, 5968844 - 5968997
Alignment:
Q  109 acatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaa 208  Q
    |||||||||| |||| |||| |||  |||||||||||   |||||||||| |||| ||| ||| |||||||||||| || ||| ||||||||||||||||    
T  5968844 acatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaa 5968943  T
Q  209 taccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||  ||||||||  |||||||||||||| ||||||||||| ||||    
T  5968944 taccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 5968997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 30542995 - 30543155
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || ||||||||  |||||||||||   ||||||||||||||| ||| |||  |||||||||| ||| ||| ||||| |||    
T  30542995 ttcaggtacatgacaaactggaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttg 30543094  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| ||| ||||||| ||||    
T  30543095 tctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaa 30543155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 108 - 278
Target Start/End: Original strand, 10656665 - 10656835
Alignment:
Q  108 gacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaa 207  Q
    ||||||||||| |||| ||||  ||  |||||||||||  | ||||||||| |||| ||| |||  |||||||||||||| ||| |||||||||||||||    
T  10656665 gacatgacaaactagaggcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtctaaa 10656764  T
Q  208 ataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||| ||||||||   ||||||||| ||||||||||||| | |||||||||||||| | |||||||| ||||    
T  10656765 atatcaaaataacaatttgtccacaaaaaatcgtataaaagaaaaaattattcaataacataaaaatttgt 10656835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 29563199 - 29563388
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  29563199 ttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 29563298  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||||| | ||||||||  |||||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  29563299 tctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 29563388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 34063260 - 34063100
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||| | ||| ||| ||||||||||||||| ||| ||||| |||    
T  34063260 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttg 34063161  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||||||||    
T  34063160 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 34063100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 252
Target Start/End: Complemental strand, 4052612 - 4052462
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  4052612 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 4052513  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaa 252  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||    
T  4052512 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaa 4052462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 12753332 - 12753458
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||| |||||| ||| |||  |||||||||||||| ||||||||| |||||||||||||||||||||  |||||||| |||||    
T  12753332 gacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtcccccaaa 12753431  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| |||| |||||| ||||    
T  12753432 aatcgtataaaacaacaaattactcaa 12753458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 31732162 - 31732036
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||  ||||    
T  31732162 gacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaataccaaaatagcattttgtccctcaaa 31732063  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  31732062 aatcgtataaaacaaaaaattactcaa 31732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 8673028 - 8673188
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  8673028 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 8673127  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||| ||||| ||||||||||| ||||    
T  8673128 tctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaa 8673188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 29672296 - 29672456
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||     
T  29672296 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagtta 29672395  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  29672396 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 29672456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 32019974 - 32020134
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| || | |||||||||||   |||||| |||||||| ||| ||| ||||||||||||||  ||| ||||| |||    
T  32019974 ttcaggtacaggacaaactggaagcaaggggtaggacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgttccacgtacaagttg 32020073  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||| | ||||||||  |||||||||||||| ||||||||||| ||||    
T  32020074 tctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 32020134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 41548678 - 41548574
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||  |||||||| ||||||||||||||| ||||||||||||||||  |||||||||    
T  41548678 cacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa 41548579  T
Q  274 cttgt 278  Q
     ||||    
T  41548578 tttgt 41548574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 289
Target Start/End: Complemental strand, 45114168 - 45114000
Alignment:
Q  121 agatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataat 220  Q
    |||||||| |||  |||||||||||   ||||||||||||||| ||| ||| | |||||||||||||| |  ||||| ||||||||||||||||||||      
T  45114168 agatgcaagggagaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcataggtacaagttgtctaaaataccaaaatagc 45114069  T
Q  221 cttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
     ||| |||| ||||||||||||||| ||| ||||||||||||  ||||| ||| || | ||||||||||    
T  45114068 atttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaatttatcatgtgttgtt 45114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 6386675 - 6386548
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  6386675 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 6386576  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  6386575 aaatcgtataaaacaaaaaattactcaa 6386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 257
Target Start/End: Original strand, 7394787 - 7394942
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |||| |||| |||   ||||||||||   ||||||||||||||| ||| ||   |||||||||||||| ||| ||||| |||    
T  7394787 ttcaggtacatgacaaactagaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttg 7394886  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    ||||||||||||||||||  ||||||||  ||||||||| |||| |||||||||||    
T  7394887 tctaaaataccaaaataacattttgtccttcaaaaatcgcataaaacaaaaaatta 7394942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 7591453 - 7591596
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||| |||||  ||| |||  |||||||||||||||||| || || |||||||||||| |||||||   |||||||| ||||    
T  7591453 ggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtctaaaatatcaaaatagcattttgtcccccaa 7591552  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  7591553 aaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 7591596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 273
Target Start/End: Complemental strand, 15001598 - 15001428
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||||||| |||||| | || ||||| ||  | |||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||     
T  15001598 ttcagggacaggacaaactggaggcaatagacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagtta 15001499  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||||| | | ||||||| ||||||||| ||||| ||| |||||||||||| | ||||||||    
T  15001498 tctaaaataccaaaat-agcatttgtcccccaaaaatcatataaaacagaaaattattcaataccataaaaa 15001428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 27104057 - 27103931
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||||||||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  27104057 gacaaaaactcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 27103958  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||| ||||| ||||||||||| ||||    
T  27103957 aatcatataaaacaaaaaattactcaa 27103931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 14005051 - 14005188
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||| |||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||||  |||    
T  14005051 gacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccataaaa 14005150  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||| |||||| ||||||||||| ||||  |||||||||    
T  14005151 aattgtataaaacaaaaaattactcaatgtcataaaaa 14005188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 25478328 - 25478215
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||||||| |||||||||||||||  || ||||| |||||||||||||||||||| | ||||||||   ||||||||||||| ||    
T  25478328 atttttgtccctcatcaaatcacagcacaactttttgtcctacgtacaagttgtctaaaataccaaaatagtattttgtccctaaaaaatcgtataaaac 25478229  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  25478228 aaaaaattactcaa 25478215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 278
Target Start/End: Complemental strand, 30501230 - 30501101
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||| ||||||||| |||||||  ||| |  | ||||||||||||||| ||    
T  30501230 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaac 30501131  T
Q  249 aaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||  ||||||||| ||||    
T  30501130 aaaaaattattcaatgtcataaaaatttgt 30501101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 31513556 - 31513745
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| | |||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||||||||||||  |  ||||| |||    
T  31513556 ttcaggtagatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcctaggtacaagttg 31513655  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  31513656 tctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 31513745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 45446540 - 45446427
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||| |||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  45446540 atttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 45446441  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  45446440 aaaaaattactcaa 45446427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 35225794 - 35225606
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||||||| |||||| | || |||| |||  |||||||||||  |||||||||||||| | ||| |||  |||||||||||||||||  ||||| |||    
T  35225794 ttcagggacaggacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttg 35225695  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||||| ||||||   ||| |||  ||||||||| ||||| |||  ||||||||||| | |||||||| ||||  ||||||||||    
T  35225694 tctaaaatacaaaaatagcatttcgtcacccaaaaatcatataaaacaggaaattattcaataccataaaaatttgtcttgtgttgttc 35225606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 37618365 - 37618525
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  37618365 ttcaggtacaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttg 37618464  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    | | |||||||||||||   ||| |||| |||||||| |||||| ||||||||||||||||    
T  37618465 ttttaaataccaaaatagcatttcgtcccccaaaaattgtataaaacaaaaaattattcaa 37618525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 37664256 - 37664416
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  37664256 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttg 37664355  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   |||||||   |||||||| ||||| ||||||||||| ||||    
T  37664356 tctaaaataccaaaatagcattttgtcgctcaaaaatcatataaaacaaaaaattactcaa 37664416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 10531337 - 10531250
Alignment:
Q  175 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| || |||||||||||||| || ||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||    
T  10531337 acaactttttatctcacatacaaattgtttagaataccaaaataatcttttgtccataaaaaatcttataagataaaaaattattcaa 10531250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 16595155 - 16595282
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    ||||||||||  ||| ||||||||||| ||||  |||  |||||||||||||| ||| ||||| || |||||||||| ||||||   |||||| ||||||    
T  16595155 ggacaaaaacatgaagttttgtccctcgctaatccacaacacaactttttgtcccacgtacaagttatctaaaatacaaaaatagctttttgttcaccaa 16595254  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||| |||||||||||||    
T  16595255 aaatcgtataagaccaaaaattattcaa 16595282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 32303591 - 32303718
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  32303591 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 32303690  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||| ||||||||||| ||||    
T  32303691 aaatcatataaaacaaaaaattactcaa 32303718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 41709876 - 41709749
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| |||||||||||||||  || ||||| || |||||||||||||||||   ||||||||  |||    
T  41709876 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccaacgtacaagttatctaaaataccaaaatagcattttgtccctcaa 41709777  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  41709776 aaatcgtataaaacaaaaaattactcaa 41709749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 278
Target Start/End: Complemental strand, 10467162 - 10467020
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||| |||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| |||||    
T  10467162 gacaaaaactgatatttttgttcctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 10467063  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||| |||||||||||||| |  ||||||||| ||||    
T  10467062 aatcgtataaaacaaaaaattattctatgtcataaaaatttgt 10467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 3251676 - 3251789
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||||| ||  || ||||| |||||||||||||||||||||  ||||||||  |||||||||||||| ||    
T  3251676 atttttgtccctcaccaaaccacatcacaactttttatcctacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaac 3251775  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  3251776 aaaaaattactcaa 3251789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 13406955 - 13407068
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||| || |||||||| ||| ||||| ||||||||||||||||||||   |||||| | ||||||||||||||| ||    
T  13406955 atttttgtccctcaccaaaccacagcataattttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtgccccaaaaatcgtataaaac 13407054  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  13407055 aaaaaattactcaa 13407068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 54256 - 54133
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    ||||||||||| |  ||||| |||  |||||||||||||| ||||||||| || || ||||||| |||||||| |||| ||||| ||||||||| |||||    
T  54256 aatttttgtcctttgctaaaccacatcacaactttttgtcccacatacaagttatcgaaaatac-aaaataatattttatccacaaaaaatcgtttaaga 54158  T
Q  248 caaaaaattattcaacatcataaaa 272  Q
    ||||||||||||||| | |||||||    
T  54157 caaaaaattattcaataccataaaa 54133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 22999357 - 22999213
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccacca 233  Q
    |||||||||||   ||||||||||||||  ||| ||  ||| |||||||| ||| ||| ||||| |||||||||||| |||||||   |||||||| |||    
T  22999357 ggacaaaaactgatatttttgtccctcagcaaaccatagcaaaacttttttgtcccacgtacaacttgtctaaaatatcaaaatagcattttgtcctcca 22999258  T
Q  234 aaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||||| ||||||||||||||||  ||||||||| ||||    
T  22999257 aaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 22999213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 289
Target Start/End: Original strand, 29611028 - 29611215
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||  ||||| | || |||| |||  |||||||||||  |||||||||||||| | ||| |||  |||||||||||||| ||| || || |||    
T  29611028 ttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttg 29611127  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||||||| |||||||||   ||| |||| ||||||| | ||||| |||| ||||||||||| | |||||||| ||||  |||||||||    
T  29611128 tctaaaacaccaaaatagcatttcgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgttgtt 29611215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 17805789 - 17805667
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcc-accaa 234  Q
    ||||||||||   |||||||| |||||| ||| ||  |||||||| |||||| ||| ||||| |||||||||||||||||||||  ||||||||  ||||    
T  17805789 gacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcctcccaa 17805690  T
Q  235 aaatcgtataagacaaaaaatta 257  Q
    ||||||||||| |||||||||||    
T  17805689 aaatcgtataaaacaaaaaatta 17805667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 36426254 - 36426355
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||| || |||||||  | |||||| |||  |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||    
T  36426254 gacaaaaactaaaaattttgtcatttactaaaccacaacacatctttttgtctcacatacaagttgtctaaaataccaaaatagtcttttgtccacaaaa 36426353  T
Q  236 aa 237  Q
    ||    
T  36426354 aa 36426355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 278
Target Start/End: Complemental strand, 39642968 - 39642839
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||||||| |||| ||| ||||  ||||||||||||||||||||   |||  ||| |||||||| |||||| ||    
T  39642968 atttttgtccctcaccaaaccacaacacaactttctgtcccacgtacaggttgtctaaaataccaaaatagcatttcatcccccaaaaattgtataaaac 39642869  T
Q  249 aaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||  ||||||||| ||||    
T  39642868 aaaaaattattcaatgtcataaaaatttgt 39642839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 286
Target Start/End: Complemental strand, 15351795 - 15351684
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||  |||| || |||||||||||||||| |   |||||||||||| ||||||||||    
T  15351795 cacaactttttgtctcagttacaaattgtctaaaataccaaaataacattttatcaaccaaaaatcgtataa-aatcaaaattattcaatatcataaaaa 15351697  T
Q  274 cttgtgatgtgtt 286  Q
     || | |||||||    
T  15351696 tttatcatgtgtt 15351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 16485782 - 16485958
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||||||||||||||||  | |||| |||  | |||||||||  |||||||||||||| | ||| ||| |||||||||||||||  || || || ||     
T  16485782 ttcagggacatgacaaattgaaggcaaaggacagaacaaaaactgcaatttttgtccctcgccaaaccacagcacaactttttgtcctacgtataagttt 16485881  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||| ||||||   ||| |||  ||||||||| ||||| ||| |||||||||||| | |||||||| ||||    
T  16485882 tctaaaatacaaaaatagcatttcgtcacccaaaaatcatataatacagaaaattattcaataccataaaaatttgt 16485958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 34101593 - 34101469
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  || |||||||| |  ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  34101593 atttttgtccctcaccaaaccacaacataacttttttttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 34101494  T
Q  249 aaaaaattattcaacatcataaaaa 273  Q
    ||||||||| |||||  ||||||||    
T  34101493 aaaaaattactcaacgccataaaaa 34101469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 40389172 - 40389012
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||| || ||||| ||| ||| ||||||||||||||| ||||||||| |||    
T  40389172 ttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacatacaagttg 40389073  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    | | |||| ||||||||   ||| |||| ||||||||||||||| | ||||||||||||||    
T  40389072 ttttaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaataaaaaattattcaa 40389012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 262
Target Start/End: Complemental strand, 10932819 - 10932708
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    ||||||||||||||||| |||  |||||||||| ||  ||| ||||| |||||||||||||||||||| |||||||||||  |||  |  |||||||| |    
T  10932819 ttttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtccataaaattttttataagacca 10932720  T
Q  251 aaaattattcaa 262  Q
    ||||||||||||    
T  10932719 aaaattattcaa 10932708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 273
Target Start/End: Original strand, 10320304 - 10320421
Alignment:
Q  156 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 255  Q
    |||||||| ||| |||  |||||||||||  ||||| ||||| |||||||||||| ||||||||  ||||||| | ||| |||||||||| || ||||||    
T  10320304 tccctcaccaaaccacaacacaactttttaccacacgtacaagttgtctaaaatatcaaaataacattttgtctaacaacaatcgtataaaaccaaaaat 10320403  T
Q  256 tattcaacatcataaaaa 273  Q
    ||||||| | ||||||||    
T  10320404 tattcaataccataaaaa 10320421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 6460344 - 6460219
Alignment:
Q  152 tttgtccctcactaaatcactgcacaacttttt-gtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    |||||| ||||| ||| |||  ||||||||||| ||| ||| || || |||||||||||||||||||||  |||||||||  ||||||||||||||||      
T  6460344 tttgtctctcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaataccaaaataacattttgtccataaaaaatcgtataagac-- 6460247  T
Q  251 aaaattattcaacatcataaaaacttgt 278  Q
    |||||||||||| | |||||||| ||||    
T  6460246 aaaattattcaataccataaaaatttgt 6460219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 21272783 - 21272700
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  21272783 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaata 21272700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 27109561 - 27109666
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||| ||| || ||| |||  |||||||||||||| | | |||||||||| ||||||||||||||||  ||| |||| ||||||||| ||||| ||    
T  27109561 atttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaataccaaaataacatttcgtcccccaaaaatcatataaaac 27109660  T
Q  249 aaaaaa 254  Q
    ||||||    
T  27109661 aaaaaa 27109666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 272
Target Start/End: Complemental strand, 14959031 - 14958921
Alignment:
Q  161 cactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattc 260  Q
    ||||||| |||  |||||||||||||| ||| ||||| | |||||||||| ||||||||  ||||| |||| |||||||||||||||  |||||| |||     
T  14959031 cactaaaccacaacacaactttttgtcccacgtacaagt-gtctaaaatatcaaaataactttttgcccacaaaaaatcgtataagatcaaaaatgattt 14958933  T
Q  261 aacatcataaaa 272  Q
    || |||||||||    
T  14958932 aatatcataaaa 14958921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 11926878 - 11926956
Alignment:
Q  177 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 255  Q
    ||||||||||| ||  ||||| |||||||||||||||||||| |||||||| |  ||||||| ||||||||| ||||||    
T  11926878 aactttttgtctcatgtacaatttgtctaaaataccaaaatagtcttttgtgcctcaaaaattgtataagactaaaaat 11926956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 28746353 - 28746284
Alignment:
Q  204 taaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||||||||||  |||||| |||||||||||||| ||||  |||||||||||||  |||||||||    
T  28746353 taaaataccaaaataaaattttgttcaccaaaaatcgtacaagatcaaaaattattcaatgtcataaaaa 28746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 11944934 - 11944854
Alignment:
Q  175 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 255  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||| |||||| | |  ||||||| ||||||||| ||||||    
T  11944934 acaactttttgtctcatgtacaatttgtctaaaataccaaaatagtcttttttgcctcaaaaattgtataagactaaaaat 11944854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 37474760 - 37474664
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||||| ||||||||||||||||| ||   |||| | | ||||||||||||||| | ||||||||||||||  ||||||||| |||| ||||| ||||    
T  37474760 tacaagttgtctaaaataccaaactagcgtttttttccccaaaaatcgtataaaataaaaaattattcaatgtcataaaaatttgtcatgtgctgtt 37474664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 5859518 - 5859605
Alignment:
Q  175 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||| || ||||| || |||||||||| |||||| | |||||||||  ||||||| |||||||| || ||||| ||||    
T  5859518 acaactttttgtcatacgtacaagttatctaaaatactaaaatagtattttgtccataaaaaatcttataagaccaataattaatcaa 5859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 17520678 - 17520583
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    ||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||| |||||| ||        |||||||| ||||||||||||||| ||||    
T  17520678 ttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtccaaaatagca--------ttttgtcccccaaaaatcgtataaaacaa 17520587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 3361789 - 3361866
Alignment:
Q  175 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaa 252  Q
    |||||||||| || ||  ||||| ||||||||  |||||||||||  ||||||||||| || ||||||||||||||||    
T  3361789 acaactttttctctcaagtacaagttgtctaatctaccaaaataacattttgtccacccaacatcgtataagacaaaa 3361866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 18297444 - 18297498
Alignment:
Q  206 aaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||  ||||| ||| |||||||||||||||| |||||||||||||    
T  18297444 aaataccaaaataat--tttgttcacaaaaaatcgtataagaccaaaaattattcaa 18297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 3394369 - 3394309
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatctttt-gtccaccaaaaatcgtataagacaaaa 252  Q
    ||||| ||||||||| |||||||||||  |||| |||||||||| ||||||||||||||||    
T  3394369 tacaagttgtctaaattaccaaaataacatttttgtccaccaaacatcgtataagacaaaa 3394309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 7722261 - 7722344
Alignment:
Q  159 ctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgta 242  Q
    |||||||||||||   |||||||||||| | |  || |||||||  |||||| |||||||||||||||||||| ||| ||||||    
T  7722261 ctcactaaatcacattacaactttttgttaaaattataaattgttaaaaatatcaaaataatcttttgtccacaaaacatcgta 7722344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 14012375 - 14012316
Alignment:
Q  203 ctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||| ||||||||  |||| |||||| ||||||||  |||||||||    
T  14012375 ctaaaataccaaaataattttttgtccttcaaacatcgtacaagacaaaccattattcaa 14012316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 5892128 - 5892074
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtc 228  Q
    |||||||||||||||||| || || ||||||||| ||||||| |||| |||||||    
T  5892128 cacaactttttgtcacacgtataagttgtctaaattaccaaattaattttttgtc 5892074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 9624239 - 9624181
Alignment:
Q  233 aaaaatcgtataagacaaaaaa-ttattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||| ||||||||||||||| |||||||| | |||||||| |||| |||||||||||    
T  9624239 aaaaattgtataagacaaaaaaattattcaataccataaaaatttgtcatgtgttgttc 9624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 22756430 - 22756520
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    ||||||| ||||||| || | |||  |||||||||||||  ||| ||||| || |||||||||| |||||| | |||| ||||||||||||    
T  22756430 aatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccaccaaaaat 22756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 38260920 - 38260805
Alignment:
Q  176 caactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga--caaaaaattattcaacatcataaaaa 273  Q
    |||||||||||| |||||| || | |||||||||||||||||| ||||||  | ||||||| | ||||||||   ||||||| |||| ||| |||||||     
T  38260920 caactttttgtcccacatataagt-gtctaaaataccaaaatagtcttttacctaccaaaatttgtataagaacaaaaaaataattcgacaccataaaag 38260822  T
Q  274 cttgtgatgtgttgttc 290  Q
     ||||  ||||||||||    
T  38260821 tttgttttgtgttgttc 38260805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 27409019 - 27408987
Alignment:
Q  240 gtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||| ||||||||||||||||||||||||    
T  27409019 gtataagataaaaaattattcaacatcataaaa 27408987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 289
Target Start/End: Complemental strand, 48445623 - 48445470
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  ||||||||||| |||| ||||||| | ||||||||||||| | ||||||| |||||||||| || |||||||  |||||||| |||||    
T  48445623 gacaaaaactgaaatttttgtccttcaccaaatcacaggacaactttttgtctcgcatacaagttgtctaaaacacgaaaataacattttgtcccccaaa 48445524  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    |||| ||||| |||| ||||||||||| | |||||||| |||| ||||||||||    
T  48445523 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgtt 48445470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 15035284 - 15035400
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||  ||||| ||||||||||||||| || |||||||||||||||| | ||||||||    
T  15035284 cacaactttttgtaccacatacaaattgtctaaaatatcaaaataacattttgcccaccaaaaatcgtacaaaacaaaaaattattcaataccataaaaa 15035383  T
Q  274 cttgtgatgtgttgttc 290  Q
     |||| |||||||||||    
T  15035384 tttgtcatgtgttgttc 15035400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 26371768 - 26371928
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||| ||||| |||    
T  26371768 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttg 26371867  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||   ||||||||  |||||||||||||| ||||||||||||||||    
T  26371868 tctaaaatactaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 26371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 40753291 - 40753131
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||||||| ||||||||||||||| ||| ||||| |||    
T  40753291 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttg 40753192  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  40753191 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 40753131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 44748831 - 44748676
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |||| |||| |||  | |||||||||  |||||||||||||||| ||| |||   ||||||||||||| ||| ||||| |||    
T  44748831 ttcaggtacatgacaaactagaggcaagggacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttg 44748732  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatta 257  Q
    |||||||||||||||||   |||||||| ||||||||||||||| |||||||||||    
T  44748731 tctaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaatta 44748676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 18386614 - 18386472
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  18386614 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 18386515  T
Q  249 aaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    ||||||||| ||||  |||| ||||| |||| |||||||||||    
T  18386514 aaaaaattactcaatgtcataaaaaatttgtcatgtgttgttc 18386472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 278
Target Start/End: Complemental strand, 26652955 - 26652826
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||||||||||||| ||    
T  26652955 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccgccaaaaatcgtataaaac 26652856  T
Q  249 aaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||  ||||||||| ||||    
T  26652855 aaaaaattattcaatgtcataaaaatttgt 26652826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 11321844 - 11322004
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  11321844 ttcaggtacaggacaaactggaggcaacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 11321943  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  11321944 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 11322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 36769528 - 36769688
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  36769528 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 36769627  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   |||||||   |||||||||||||| ||||||||||| ||||    
T  36769628 tctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaacaaaaaattactcaa 36769688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 30849238 - 30849365
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| || |||||| |||| ||||||||||||||||  |||||||| ||||    
T  30849238 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatatacaagttgtataaaataccaaaataacattttgtcccccaa 30849337  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  30849338 aaatcgtataaaacaaaaaattactcaa 30849365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 278
Target Start/End: Original strand, 34295397 - 34295539
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| |||||    
T  34295397 gacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 34295496  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||| ||||| ||||||||||||||||  ||||||||| ||||    
T  34295497 aatcatataaaacaaaaaattattcaatgtcataaaaatttgt 34295539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 47953292 - 47953166
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  47953292 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 47953193  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  47953192 aatcgtataaaacaaaaaattactcaa 47953166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 21785007 - 21784847
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || ||||  ||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  21785007 ttcaggcacatgacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 21784908  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   |||||||| ||||||||||||||| ||| ||||||| ||||    
T  21784907 tctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaacataaaattactcaa 21784847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 26994184 - 26994344
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || |||| |||  |||||||| ||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  26994184 ttcaggtacatgacaaactggaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 26994283  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||   ||||||||||||| ||||||||||| ||||    
T  26994284 tctaaaataccaaaatagcattttgtccctaaaaaatcgtataaaacaaaaaattactcaa 26994344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 29661459 - 29661299
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| |||||||||||| || ||| ||||| ||     
T  29661459 ttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaagtta 29661360  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  29661359 tctaaaataccaaaatagcattttgtcccacaaaaatcgtataaaacaaaaaattactcaa 29661299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 283
Target Start/End: Complemental strand, 329572 - 329425
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||| |||||| |||||||||   |||||||| |||||    
T  329572 gacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatagcattttgtcccccaaa 329473  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 283  Q
    |||| ||||| |||| ||||||||||| | |||||||| |||| ||||    
T  329472 aatcatataaaacaagaaattattcaataccataaaaatttgtcatgt 329425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 46633799 - 46633673
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||| |||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  46633799 gacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 46633700  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  46633699 aatcgtataaaacaaaaaattactcaa 46633673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 23349297 - 23349438
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||||||||||||| ||||| |  ||| |||| |||| ||||||| || ||    
T  23349297 atttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatactaaaatgacatttcgtcccccaacaatcgtagaaaac 23349396  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||  | ||||||| |||| ||||| |||||    
T  23349397 aaaaaattattcaatgttataaaaatttgtcatgtgctgttc 23349438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 10932516 - 10932676
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| |||  ||  |||||||||||||| ||| ||||| |||    
T  10932516 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttg 10932615  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  10932616 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 10932676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 29992729 - 29992820
Alignment:
Q  177 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcata 269  Q
    ||||||||||| ||| ||||| || |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  29992729 aactttttgtctcacgtacaagttatctaaaatac-aaaataattttttgtccaccaaaaatcgtataagaccaaaaattattcaaaatcata 29992820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 47316657 - 47316817
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||||| ||| |||    
T  47316657 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttg 47316756  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||| ||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  47316757 tctaaattaccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 47316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 18470787 - 18470660
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||| ||||| ||| ||| ||| ||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  18470787 ggacaaaaactcatatttttgtctctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 18470688  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||| ||||||||||| ||||    
T  18470687 aaatcatataaaacaaaaaattactcaa 18470660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 41211159 - 41211320
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  41211159 ttcaggtacaagacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 41211258  T
Q  202 tctaaaataccaaaata--atcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||  || |||| |||   ||||||||||||| ||||||||||| ||||    
T  41211259 tctaaaataccaaaatagcat-ttttatccctaaaaaatcgtataaaacaaaaaattactcaa 41211320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 30599014 - 30599156
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||| |||  |||||||||||||| ||  |||||||| ||||||||||||||||||  |||||||| | ||||||||||||| ||    
T  30599014 atttttgtccctcatcaaaccacaacacaactttttgtctcaagtacaaattatctaaaataccaaaataacattttgtcccctaaaaatcgtataaaac 30599113  T
Q  249 aaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    || |||||| ||||  |||| ||||| |||| |||||||||||    
T  30599114 aacaaattactcaatttcataaaaaatttgtcatgtgttgttc 30599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 273
Target Start/End: Complemental strand, 38301445 - 38301308
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| |||  |||| |||||||||||| ||||||||  |||||||| ||||    
T  38301445 ggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacg-acaagttgtctaaaatatcaaaataacattttgtcccccaa 38301347  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||| | ||||||||||||||||  |||||||||    
T  38301346 aaatcgtattaaacaaaaaattattcaatgtcataaaaa 38301308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 278
Target Start/End: Complemental strand, 48699500 - 48699358
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  |||| ||||||||||||||| |||  ||||||| |||||  ||| ||||| ||||||||||||||||||||  ||| ||||||| |||    
T  48699500 gacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatagacttatgtccacaaaa 48699401  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||| ||||| |||| | |||||| | ||||||| |||||    
T  48699400 aatcgtacaagaccaaaagtcattcaataccataaaagcttgt 48699358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 272
Target Start/End: Original strand, 29372772 - 29372908
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||| ||||||||||| |||||||| |||  ||||||||| |||  ||  ||||| |||||||||||  |||| ||| ||||| |||||||||    
T  29372772 gacaaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaatttcaaattaaccttttatccaccaaa 29372871  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||| |||||||| |||||||||| || | |||||||    
T  29372872 aatcatataagaccaaaaattatttaataccataaaa 29372908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 32873761 - 32873917
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||||| |||| ||| |||  |||||||||||||| ||| ||||| |||||| |||||||||||||   ||||||||  |||    
T  32873761 ggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaaatagcattttgtccctcaa 32873860  T
Q  235 aaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    ||||||||||| ||||||||||| ||||   ||| ||||| |||| |||||||||||    
T  32873861 aaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 32873917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 262
Target Start/End: Complemental strand, 48894833 - 48894693
Alignment:
Q  122 gatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatc 221  Q
    ||||||| |||  |||||||||||   |||||||||  |||||||| |||  |||||||||||||| ||| |||||||  |||||||  |||||||||      
T  48894833 gatgcaagggacaggacaaaaactcatatttttgtcattcactaaaccacatcacaactttttgtcccacgtacaaatcatctaaaaatccaaaataaca 48894734  T
Q  222 ttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||| ||||||||| ||||| ||||||||||||||||    
T  48894733 ttttgtcccccaaaaatcttataaaacaaaaaattattcaa 48894693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 273
Target Start/End: Complemental strand, 1870238 - 1870099
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccacca 233  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||| ||||||||  |||||| ||   |    
T  1870238 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctaaa 1870139  T
Q  234 aaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||| ||||||||||| ||||  |||||||||    
T  1870138 aaaatcgtataaaacaaaaaattactcaatgtcataaaaa 1870099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 151 - 290
Target Start/End: Complemental strand, 9913612 - 9913473
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    ||||||| ||||| ||| |||  ||||||||||| || ||| ||||  |||||||||||||||||||||  ||| |||| ||||||||||||||| || |    
T  9913612 ttttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaatcgtataaaacta 9913513  T
Q  251 aaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||   |||||||| |||| ||||| |||||    
T  9913512 aaaattattcaattccataaaaatttgtcatgtggtgttc 9913473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 151 - 290
Target Start/End: Complemental strand, 9927300 - 9927161
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    ||||||| ||||| ||| |||  ||||||||||| || ||| ||||  |||||||||||||||||||||  ||| |||| ||||||||||||||| || |    
T  9927300 ttttgtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaatcgtataaaacta 9927201  T
Q  251 aaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||   |||||||| |||| ||||| |||||    
T  9927200 aaaattattcaattccataaaaatttgtcatgtggtgttc 9927161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 41903604 - 41903699
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgt 288  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| |||||||||| ||||| | |||||||  || |||||||||||    
T  41903604 tacaaattgtctaaaatactaaaatagtcttttgtccaccaaacatcatataaaacaaaaaattgttcaagaccataaaagtttatgatgtgttgt 41903699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 43368304 - 43368149
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||| |||||  ||| ||| |||||||||||||||  || ||||| |||||||||||| |||||||   ||||||||  | |    
T  43368304 ggacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgtccctcca 43368205  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||| ||||||||||||||||  | ||||||| |||| ||||| |||||    
T  43368204 aaatcgtataaaacaaaaaattattcaatgtgataaaaatttgtcatgtgctgttc 43368149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 3922696 - 3922814
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||| |||||| ||| ||| ||||||||||||||| ||| ||||| || |||||||||||||||||   ||||||||  ||||    
T  3922696 gacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaa 3922795  T
Q  236 aatcgtataagacaaaaaa 254  Q
    |||||||||| ||||||||    
T  3922796 aatcgtataaaacaaaaaa 3922814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 17237178 - 17237052
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||  |||||||| |||  |||||||||||||| ||| |||||||| |||||||  |||||||||  ||| |||| |||||    
T  17237178 gacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaaattatctaaaaatccaaaataacatttcgtcccccaaa 17237079  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||| ||||| ||||||||||||||||    
T  17237078 aatcttataaaacaaaaaattattcaa 17237052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 21133454 - 21133356
Alignment:
Q  156 tccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    ||||||| |||| |||  |||||||||||||| ||||||||||||||||||||||||||||||   ||| |||  ||||||||||||||| ||||||||    
T  21133454 tccctcaataaaccacatcacaactttttgtctcacatacaaattgtctaaaataccaaaatagcatttcgtctcccaaaaatcgtataaaacaaaaaa 21133356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 47947825 - 47947736
Alignment:
Q  173 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  47947825 gcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 47947736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 22724490 - 22724650
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||||||| |||||| | || |||| ||||  ||||||| ||  |||||||||||||||| ||| ||| || ||||||| |||| ||| ||||| |||    
T  22724490 ttcagggacaggacaaactggaggcaagggatatgacaaaagctgcaatttttgtccctcaccaaaccacagcgcaactttatgtcccacgtacaagttg 22724589  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||   ||| |||  ||||||||| ||||| ||| ||||||||||||    
T  22724590 tctaaaatacaaaaatagcatttcgtcgcccaaaaatcatataatacagaaaattattcaa 22724650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 43158645 - 43158805
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||||| || ||| |||  |||||||||||||| ||| ||||| |||    
T  43158645 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcccacgtacaagttg 43158744  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||| | |||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  43158745 tctaaaacatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 43158805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 3892018 - 3892145
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||| ||||| ||||||| |||||||||||||||  || ||||| ||||||| ||||||||||||   |||||| |  |||    
T  3892018 ggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaataccaaaatagcattttgttcctcaa 3892117  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||| ||| ||||||||||| ||||    
T  3892118 aaatcgtgtaaaacaaaaaattactcaa 3892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 41665567 - 41665710
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||  |||||||||||||| | ||| |||  |||||||||||||| ||| ||||| ||||||||||||| ||||||   ||| |||  ||||    
T  41665567 ggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaa 41665666  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||  ||||| ||| |||||||||||| | |||||||| ||||    
T  41665667 aaattatataaaacagaaaattattcaataccataaaaatttgt 41665710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 22631827 - 22631722
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||| |||| ||| |||  || |||||||||| | || ||||| ||||||||||||||||||| || ||| |||| ||||||||||||||| ||    
T  22631827 atttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaataccaaaatgatatttcgtcccccaaaaatcgtataaaac 22631728  T
Q  249 aaaaaa 254  Q
    ||||||    
T  22631727 aaaaaa 22631722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 34117541 - 34117400
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  ||||| |||||||  ||  ||||| ||||||||||| ||||||||   ||| |||| ||||||||||||||| ||    
T  34117541 atttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaac 34117442  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
     |||||||||||||   |||||||| ||||  ||||||||||    
T  34117441 gaaaaattattcaatgccataaaaatttgtcttgtgttgttc 34117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 278
Target Start/End: Original strand, 43213931 - 43214060
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||| |||| ||| |||  |||||||||||||| ||||||||| ||||| ||||||||||||||   ||| || |  |||||||| ||||| ||    
T  43213931 atttttgtccttcaccaaaccacaacacaactttttgtcccacatacaagttgtcaaaaataccaaaatagcatttcgtgcctcaaaaatcctataaaac 43214030  T
Q  249 aaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||| ||||||  ||||||||| ||||    
T  43214031 aaaaaatgattcaatgtcataaaaatttgt 43214060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 46408978 - 46408865
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| |||||||||||||||  |||||||| |||||||||||| |||||||   | |||||   |||||||||||||| |     
T  46408978 atttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgtctaaaatatcaaaatagcatattgtctctcaaaaatcgtataaaat 46408879  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  46408878 aaaaaattactcaa 46408865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 46448650 - 46448763
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||| |||||||| ||| ||||||||||||||| ||  || ||||| |||||||  |||||||||  ||| |||| | ||||||| ||||| ||    
T  46448650 atttttgtccgtcactaaaccacagcacaactttttgtcccatgtataaattatctaaaaatccaaaataacatttcgtcccctaaaaatcttataaaac 46448749  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||||||||    
T  46448750 aaaaaattattcaa 46448763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 43189235 - 43189362
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgt-ccaccaa 234  Q
    ||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| ||||||| |||||||||||| | |||||| || ||||    
T  43189235 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctagaataccaaaatagtattttgtccccccaa 43189334  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||| | |||| |||||| ||||    
T  43189335 aaatcgtatgaaacaacaaattactcaa 43189362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 290
Target Start/End: Complemental strand, 1363725 - 1363585
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||| |||  |||||||||||||| ||| ||||  ||||| ||||||| ||||||   ||| || | |||||||| |||||| ||    
T  1363725 atttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgtcaaaaatacaaaaatagcatttcgtac-ccaaaaattgtataaaac 1363627  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||   |||||||| |||| |||||||||||    
T  1363626 aaaaaattattcaatgccataaaaatttgtcatgtgttgttc 1363585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 20127378 - 20127273
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||| |||||  ||| |||  |||||||||||||| ||| ||||| |||| |||||||||||||| |  ||| |||| ||||||||||||||| ||    
T  20127378 atttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaataccaaaatgacatttcgtcccccaaaaatcgtataaaac 20127279  T
Q  249 aaaaaa 254  Q
    ||||||    
T  20127278 aaaaaa 20127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 30053046 - 30052925
Alignment:
Q  137 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 236  Q
    |||||||||| |||| |||||| |||||||| ||| ||| || |||||||| | |||| || |||||||||||| ||||||| |  ||||| || |||||    
T  30053046 acaaaaactaaaattcttgtccttcactaaaacacggcataattttttgtctcgcatataagttgtctaaaatatcaaaatagttgtttgttcatcaaaa 30052947  T
Q  237 atcgtataagacaaaaaattat 258  Q
    || ||||||||| ||| |||||    
T  30052946 attgtataagaccaaatattat 30052925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 46627259 - 46627146
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||| |||||||  ||| ||| |||||| |||||||| ||| |||  |||||||||||||| |||||| | ||| |||  |||||||| |||||| ||    
T  46627259 atttttatccctcatcaaaccacagcacaattttttgtctcacgtacggattgtctaaaatacaaaaatagtatttcgtctcccaaaaattgtataaaac 46627160  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||||||||    
T  46627159 aaaaaattattcaa 46627146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 30259938 - 30260042
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||||| ||  || ||||| |||||||||||| |||| |||| |||| | || ||||| ||||||||||  ||||||||||||| ||||||||||    
T  30259938 cacaactttttatcttacttacaagttgtctaaaatatcaaattaattttttattcatcaaaactcgtataagatcaaaaattattcaatatcataaaaa 30260037  T
Q  274 cttgt 278  Q
     ||||    
T  30260038 tttgt 30260042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 34519644 - 34519528
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||||||||  | || |||| |||  |||||||||||  |||||||||||||| | ||| |||  |||||||||||||| ||  ||||| |||    
T  34519644 ttcagggacatgacaagctggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttg 34519545  T
Q  202 tctaaaataccaaaata 218  Q
    |||||||||| ||||||    
T  34519544 tctaaaatacaaaaata 34519528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 42332123 - 42332059
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    |||||||||||||| |||||||||||||||| ||||| ||||||||  |||| ||||||||||||    
T  42332123 cacaactttttgtctcacatacaaattgtcttaaatatcaaaataacattttatccaccaaaaat 42332059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 3359911 - 3359970
Alignment:
Q  213 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||| | ||||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  3359911 aaaatagttttttgtcgaccaaaaatagtataagacaaaaaattattcaatatcataaaa 3359970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 44668865 - 44668786
Alignment:
Q  181 ttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca-ccaaaaatcgtataagacaaaaaattatt 259  Q
    ||||||| |||||||||||| || ||||||||||||||   ||||||| | ||||||||||||||||| |||||||||||    
T  44668865 ttttgtctcacatacaaattttcaaaaataccaaaatagctttttgtcgatccaaaaatcgtataagataaaaaattatt 44668786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 37967110 - 37966929
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||||| ||||||| |||   |||||||||    |||||||||  |||||| | |||  |||||||||||||  ||| ||||| ||     
T  37967110 ttcaggtacatgacaaattggatgcaagggacaagacaaaaacccatatttttgtctttcactagaccacatcacaactttttgttccacgtacaagtta 37967011  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 283  Q
    |||||||  ||||||||   ||| ||||   ||||||||||||| ||||||||||||| || | |||||||| |||| ||||    
T  37967010 tctaaaaatccaaaatagcatttcgtcccaaaaaaatcgtataaaacaaaaaattatttaataccataaaaatttgttatgt 37966929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 8083785 - 8083847
Alignment:
Q  192 atacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattat 258  Q
    ||||||||||||||||||  ||||||| |||||| |||||  |||||||||||||||||||||||||    
T  8083785 atacaaattgtctaaaat--caaaatagtcttttatccac--aaaatcgtataagacaaaaaattat 8083847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 21408331 - 21408419
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||||||  || || || |||| |||||||| |||| || |||||||||| ||||||| |||||||||||| ||||||||||    
T  21408331 cacaattttttgtcctacgtataagttgtttaaaatacgaaaagaaccttttgtccatcaaaaattgtataagacaaagaattattcaa 21408419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 26910369 - 26910485
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||||||| | |||| | || |||| |||  ||| |||||||  |||||||||||||| | ||| |||  |||||||||||||||||| ||||| |||    
T  26910369 ttcagggacagggcaaactggaggcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcacacgtacaagttg 26910468  T
Q  202 tctaaaataccaaaata 218  Q
    || ||||||| ||||||    
T  26910469 tcaaaaatacaaaaata 26910485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 289
Target Start/End: Original strand, 29455880 - 29455992
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||| ||||||| | || |  ||||||||||||||   ||||||||||| |||||| |||||||| ||| ||||||||| | |||||||     
T  29455880 cacaactttttgtcccacatactagttat--aaaataccaaaatagcgttttgtccacc-aaaatcatataagaccaaatattattcaataccataaaag 29455976  T
Q  274 cttgtgatgtgttgtt 289  Q
     |||| ||||||||||    
T  29455977 tttgtcatgtgttgtt 29455992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 272
Target Start/End: Complemental strand, 35645548 - 35645413
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    |||||||||| ||||| | ||||||||||||| |||  ||||||||||| ||  || ||||| ||||||||||||  |||||| || ||| | || | ||    
T  35645548 gacaaaaact-gaattctcgtccctcactaaaccacaacacaactttttatcgtacgtacaagttgtctaaaataataaaatagtcattttttcatccaa 35645450  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||||| ||||||| |  ||||| |||||||    
T  35645449 aatcgtataagataaaaaatgacccaacaccataaaa 35645413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 38360129 - 38360041
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat 268  Q
    |||||||| ||| ||||| |||| |||||||| |||||||| ||||||||| |||||||  ||||  || ||||||||||||| |||||    
T  38360129 tttttgtctcacctacaagttgtttaaaatacaaaaataatattttgtccaacaaaaattatatagaaccaaaaattattcaatatcat 38360041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 42072995 - 42073090
Alignment:
Q  140 aaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||| |||||||||  |||| ||||| |  |||||| |||||||  || |||||| ||||||||||||| |||||||| |||| |||||||||    
T  42072995 aaaactaaaatttttgtttctcattaaattatagcacaattttttgtttcaaatacaagttgtctaaaatacaaaaataatattttatccaccaaa 42073090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 262
Target Start/End: Original strand, 21408635 - 21408744
Alignment:
Q  152 tttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaa 251  Q
    ||||||||||| |||| |||  || |||||||| |  ||  ||||| || |||||||||| |||||| | ||| |||||| ||||||||||||||| |||    
T  21408635 tttgtccctcattaaaccacaacataactttttatttcatgtacaagttatctaaaatacaaaaatagt-tttcgtccactaaaaatcgtataagataaa 21408733  T
Q  252 aaattattcaa 262  Q
    |||||||||||    
T  21408734 aaattattcaa 21408744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 11250706 - 11250587
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| || |      ||||||||||||||||| ||   ||||||||  |||||||| ||||| ||    
T  11250706 atttttgtccctcaccaaaccacaacacaactttttgtcccatag-----ttgtctaaaataccaaactagcattttgtccctcaaaaatcatataaaac 11250612  T
Q  249 aaaaaattattcaacatcataaaaa 273  Q
    ||||||||| |||| | ||||||||    
T  11250611 aaaaaattactcaataccataaaaa 11250587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 45063622 - 45063678
Alignment:
Q  199 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaat 255  Q
    |||||||||||||||||||||| |||| |||| |||| ||| ||||||| |||||||    
T  45063622 ttgtctaaaataccaaaataattttttttccatcaaagatcatataagataaaaaat 45063678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 16963147 - 16963092
Alignment:
Q  199 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    ||||||||||||||||||||   ||||||||  |||||||||||||| ||||||||    
T  16963147 ttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaa 16963092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 22724024 - 22724179
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||  ||| ||||||| || | ||| |||  | ||||||||| || ||| ||||| |||| |||||||| ||||||   ||| |||  ||||    
T  22724024 ggacaaaaactgcaatgtttgtccatcgccaaaccacaacgcaactttttatcccacgtacaagttgtataaaatacaaaaatagcatttcgtcacccaa 22724123  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||| ||||| ||| |||||||||||| | |||||||| || |  ||||||||||    
T  22724124 aaatcatataatacagaaaattattcaataccataaaaatttatcttgtgttgttc 22724179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 7958715 - 7958634
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca 230  Q
    |||||||||| |||||||| |||  ||| |||||||||||  |  ||||| |||||||||||||||||||| | |||||||||    
T  7958715 aatttttgtcactcactaa-tcatagcataactttttgtctgaagtacaagttgtctaaaataccaaaatagttttttgtcca 7958634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 272
Target Start/End: Original strand, 12098381 - 12098489
Alignment:
Q  164 taaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaac 263  Q
    ||||||||  || ||||||||||| ||  ||| | ||||||||||||| |||| ||  ||||| || |||||| || |||||||  ||| |||||||||     
T  12098381 taaatcacaacataactttttgtctcaactacgagttgtctaaaatacaaaaacaacattttgccctccaaaattcttataagatcaaagattattcaat 12098480  T
Q  264 atcataaaa 272  Q
    |||||||||    
T  12098481 atcataaaa 12098489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 16963274 - 16963174
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| |||| |||| |||| |||||||||||   |||||||||||| |  ||| |||   ||||||||||||| ||| ||||| |||    
T  16963274 ttcaggtacatgacaaactagaggcaagggataggacaaaaactcatatttttgtcccttatcaaaccacaatacaactttttgtcccacgtacaagttg 16963175  T
Q  202 t 202  Q
    |    
T  16963174 t 16963174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 18018 - 18178
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  18018 ttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 18117  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  18118 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 18178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 12533 - 12660
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  12533 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 12632  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  12633 aaatcgtataaaacaaaaaattactcaa 12660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 10324108 - 10324268
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  10324108 ttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttg 10324207  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  |||||||| | ||||||||||||| ||||||||||| ||||    
T  10324208 tctaaaataccaaaataacattttgtccccaaaaaatcgtataaaacaaaaaattactcaa 10324268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 288
Target Start/End: Original strand, 7396127 - 7396306
Alignment:
Q  106 gggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtcta 205  Q
    ||||||||||||  | || ||||||||  |||||||||| |||| | ||||||||||||||| |||| |||||||||||||| ||| ||||| || ||||    
T  7396127 gggacatgacaagctggaagcaatggacaggacaaaaac-agaaatcttgtccctcactaaaccactacacaactttttgtctcacgtacaagttatcta 7396225  T
Q  206 aaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgt 288  Q
    |||||| |||||| | ||||||||| ||||||| |||| ||||  |||||||||||| | |||||||| |||| |||||||||    
T  7396226 aaatacaaaaatagtgttttgtccatcaaaaatggtatgagac--aaaattattcaataccataaaaatttgtcatgtgttgt 7396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 135 - 289
Target Start/End: Complemental strand, 10485256 - 10485102
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  10485256 ggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 10485157  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||||||||||| ||||||||||||||||  ||||||| | ||||  |||||||||    
T  10485156 aaatcgtataaaacaaaaaattattcaatgtcataaatatttgtcctgtgttgtt 10485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 32409882 - 32410020
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| |||  |||| |||||||||||||||||||| | ||||||||  |||    
T  32409882 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatagtattttgtccctcaa 32409981  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||||| ||||||||||||||||  |||||||||    
T  32409982 aaatcgtataaaacaaaaaattattcaatgtcataaaaa 32410020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 2615028 - 2614839
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  2615028 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 2614929  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    |||||||||||||||||   ||||||||  |||||||||||||| | ||||||||| ||||   ||| ||||| |||| |||||||||||    
T  2614928 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 2614839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 17443394 - 17443234
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| ||||||||| |||  |||||||||||   |||||| |||||||| ||| ||| | ||||||||||||| ||| ||||| |||    
T  17443394 ttcaggtacaggacaaactagatgcaagggacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttg 17443295  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||| |||| ||||||||||||||| ||| ||||||||||||    
T  17443294 tctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaa 17443234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 3932837 - 3932964
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  3932837 ggacaaaaactcatatttttgtctctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaa 3932936  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||||||||    
T  3932937 aaatcgtataaaacaaaaaattattcaa 3932964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 17867920 - 17867807
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  17867920 atttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 17867821  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  17867820 aaaaaattactcaa 17867807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 17877703 - 17877590
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||  ||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  17877703 atttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 17877604  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  17877603 aaaaaattactcaa 17877590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 24242749 - 24242625
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  24242749 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 24242650  T
Q  249 aaaaaattattcaacatcataaaaa 273  Q
    ||||||||| ||||  |||||||||    
T  24242649 aaaaaattactcaatgtcataaaaa 24242625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 10960099 - 10959944
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||  ||| |||  |||||||||||||| ||| ||||| ||||||||||||| ||||||   |||||||| ||||    
T  10960099 ggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtcccccaa 10960000  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||| |||||| || ||||||   |||||||| |||| |||||||||||    
T  10959999 aaatcgtataaaacaaaatatcattcaatgccataaaaatttgtcatgtgttgttc 10959944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 11613821 - 11613948
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||| |||||||||||||||   ||||||||  |||    
T  11613821 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtataaaataccaaaatagcattttgtccctcaa 11613920  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  11613921 aaatcgtataaaacaaaaaattactcaa 11613948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 272
Target Start/End: Complemental strand, 29054488 - 29054319
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||   ||||||||||| |||||||||||||| | ||| ||| ||||||||||||||| ||| ||||| |||    
T  29054488 ttcaggaacaggacaaattggaagcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttg 29054389  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||||||| ||||||||  ||| |||  ||||||||| ||||| ||| |||||||||||| | |||||||    
T  29054388 tctaaaata-caaaataacatttcgtcacccaaaaatcatataatacagaaaattattcaataccataaaa 29054319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 34176928 - 34176802
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||| ||||| ||||||| ||||||||||||||| ||| ||||| | ||||||||||||||||||   ||||||||  ||||    
T  34176928 gacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcccacgtacaagtagtctaaaataccaaaatagcattttgtccctcaaa 34176829  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  34176828 aatcgtataaaacaaaaaattactcaa 34176802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 18057644 - 18057491
Alignment:
Q  109 acatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaa 208  Q
    |||||||||| |||||| || |||   ||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| ||||||||||    
T  18057644 acatgacaaactagatgtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaa 18057545  T
Q  209 taccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||   ||| |||| | ||||||||||||| ||| ||||||||||||    
T  18057544 taccaaaatagcatttcgtcctctaaaaatcgtataaaacataaaattattcaa 18057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 14925453 - 14925613
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||||| || |||  |||||||||||   ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||    
T  14925453 ttcaggtacaggacaaactagatgtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttg 14925552  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||  |||| | ||||||||||||| ||| ||||||||||||    
T  14925553 tctaaaataccaaaatagcattccgtcccctaaaaatcgtataaaacataaaattattcaa 14925613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 3259782 - 3259655
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  3259782 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 3259683  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  3259682 aaatcgtataaaacaaaaaattactcaa 3259655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 24203461 - 24203335
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  |||||||| |  |    
T  24203461 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc-ctca 24203363  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    |||| |||||| ||||||||||| ||||    
T  24203362 aaattgtataaaacaaaaaattactcaa 24203335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 7365446 - 7365348
Alignment:
Q  175 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| || ||||||| | |||||| ||||||||| |||||||||| || | ||||||||    
T  7365446 acaactttttgtcacacataaaaattgtctaaaatatcaaaatagtcatttgtccgcaaaaaatggtataagactaaaaattatttaataccataaaaa 7365348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 9902688 - 9902798
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||||||||| |||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||| |||| ||||    
T  9902688 ggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatttcgtcccccaa 9902787  T
Q  235 aaatcgtataa 245  Q
    ||||| |||||    
T  9902788 aaatcatataa 9902798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 31870144 - 31870285
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| || |  ||||||||||||| ||||||   ||| |||| |||||| |||||||| ||    
T  31870144 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaaaatacaaaaatagcatttcgtcccccaaaactcgtataaaac 31870243  T
Q  249 aaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||   |||||||| |||| |||||||||||    
T  31870244 aaaaaattattcaatgccataaaaatttgtcatgtgttgttc 31870285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 11279227 - 11279100
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||| |||  |||    
T  11279227 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttatccctcaa 11279128  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    |||||| |||| ||||||||||| ||||    
T  11279127 aaatcgaataaaacaaaaaattactcaa 11279100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 15277310 - 15277437
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| ||||||||||||||||||||   |||||||  ||||    
T  15277310 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtcttccaa 15277409  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| |||| |||||| ||||    
T  15277410 aaatcgtataaaacaacaaattactcaa 15277437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 32132410 - 32132537
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||  |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  32132410 ggacaaaaactcatatttttgtccctcaccaatccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 32132509  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| |||| |||||| ||||    
T  32132510 aaatcgtataaaacaacaaattactcaa 32132537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 11382194 - 11382040
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   |||||||||  |||| ||| |||  |||||||||||||| ||| ||||| |||    
T  11382194 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtc--tcaccaaaccacaacacaactttttgtctcacgtacaagttg 11382097  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattat 258  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||||    
T  11382096 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattat 11382040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 34684027 - 34684136
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaa-taccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    ||||||||||||||| ||| |||  |||||||||||||  ||| ||||| |||||||||| ||||||||||   |||||||| ||||||||||||||| |    
T  34684027 atttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaaataccaaaatagcattttgtcctccaaaaatcgtataaaa 34684126  T
Q  248 caaaaaatta 257  Q
    ||||||||||    
T  34684127 caaaaaatta 34684136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 273
Target Start/End: Original strand, 166967 - 167091
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||| ||||   ||||||| ||||| ||    
T  166967 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcgtcccttaaaaatcatataaaac 167066  T
Q  249 aaaaaattattcaacatcataaaaa 273  Q
    ||||||||| ||||  |||||||||    
T  167067 aaaaaattactcaatgtcataaaaa 167091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 3379808 - 3379690
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||| ||||| ||| ||  ||||||||||||||| ||||||||| |||||| |||||||||||||   ||| |||| |||||    
T  3379808 gacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacatacaagttgtcttaaataccaaaatagcatttcgtcctccaaa 3379709  T
Q  236 aatcgtataagacaaaaaa 254  Q
    |||| ||||| ||||||||    
T  3379708 aatcatataaaacaaaaaa 3379690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 290
Target Start/End: Original strand, 18597201 - 18597343
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    |||||||||||||||| ||| |||  |||||||||||||| ||| || || ||||||||||  | |||||| |  || ||||  |||||||| ||||| |    
T  18597201 aatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtctaaaacgctaaaatagtacttcgtccctcaaaaatcatataaaa 18597300  T
Q  248 caaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||| | |||||||| || | |||||||||||    
T  18597301 caaaaaattattcaataccataaaaatttattatgtgttgttc 18597343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 8177925 - 8178030
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||||||| || ||| |||  |||||||||||||| ||| | ||| |||||||||||||||||||||  ||| |||| ||||||||| ||||| ||    
T  8177925 atttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtctaaaataccaaaataacatttcgtcccccaaaaatcatataaaac 8178024  T
Q  249 aaaaaa 254  Q
    ||||||    
T  8178025 aaaaaa 8178030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 15276934 - 15277094
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||||||||| || ||| ||||| |||    
T  15276934 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttttcccacgtacaagttg 15277033  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||| | |||||||   ||||||||  |||||||| ||||| ||||||||||| ||||    
T  15277034 tctaaaagaacaaaatagcattttgtccctcaaaaatcttataaaacaaaaaattactcaa 15277094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 32860183 - 32860007
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||||||||| | || |||| |||   ||||||| ||  ||||||||||| || | ||| ||| ||||||| ||||||| ||| ||||| ||     
T  32860183 ttcagggacatgacaaactggaggcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaaccttttgtctcacgtacaagttt 32860084  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||| |||||||  ||| |||  |||||||||  |||| ||| |||||||||||| | |||||||| ||||    
T  32860083 tctaaaatacaaaaataacatttcgtcacccaaaaatcaaataatacagaaaattattcaataccataaaaatttgt 32860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 262
Target Start/End: Complemental strand, 11212340 - 11212229
Alignment:
Q  151 ttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaa 250  Q
    ||||||||||||| ||| |||  || ||| ||||||| ||| | ||| |||||||||||||||||||||  ||||||||  ||||||||| |||| ||||    
T  11212340 ttttgtccctcaccaaaccacaacataaccttttgtctcacgtgcaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgaataaaacaa 11212241  T
Q  251 aaaattattcaa 262  Q
    ||||||| ||||    
T  11212240 aaaattactcaa 11212229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 262
Target Start/End: Original strand, 16542309 - 16542432
Alignment:
Q  139 aaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    ||||| || |||| ||||| ||||| ||||||||  |||| ||||| |  ||  ||||| ||||||||||||||||||||| ||||| | || |||||||    
T  16542309 aaaaattaaaattcttgtctctcacaaaatcactatacaaatttttatttcaagtacaagttgtctaaaataccaaaataaccttttatgcaacaaaaat 16542408  T
Q  239 cgtataagacaaaaaattattcaa 262  Q
     |||||||| ||||||||||||||    
T  16542409 tgtataagataaaaaattattcaa 16542432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 4494159 - 4494248
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    ||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||||||||||||| ||||||  |||||||| | ||||||    
T  4494159 atttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccgaaataacattttgtccccaaaaaat 4494248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 272
Target Start/End: Original strand, 29424655 - 29424734
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||| || |||||||||| |||||| | |||||||||||||||| |||| ||||| ||||||||||||| | |||||||    
T  29424655 tacaagttatctaaaatacaaaaatagttttttgtccaccaaaaaacgtacaagaccaaaaattattcaataccataaaa 29424734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 8844488 - 8844422
Alignment:
Q  193 tacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 259  Q
    ||||| |||||||| |||| |||||| |||||||||||||||| || |||||||||||| |||||||    
T  8844488 tacaagttgtctaagatactaaaatagtcttttgtccaccaaacatagtataagacaaacaattatt 8844422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 9614034 - 9613944
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaaca 264  Q
    ||||| |||||||  ||| || || ||||||||||||| ||||||||||| ||||||| || |||| ||||| || |||||||||||||||    
T  9614034 cacaattttttgttccacgtataagttgtctaaaatactaaaataatcttctgtccacaaataatcatataacaccaaaaattattcaaca 9613944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 27756375 - 27756249
Alignment:
Q  164 taaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaac 263  Q
    ||||||||  |||||||||||||| | | || || |||||||||||| ||||||||  |||| ||||| ||| |||||| ||||| ||| |||||||||     
T  27756375 taaatcacaacacaactttttgtcccccgtataagttgtctaaaatatcaaaataacattttatccactaaatatcgtacaagaccaaagattattcaat 27756276  T
Q  264 atcataaaaacttgtgatgtgttgttc 290  Q
    || |||  || ||||| ||||||||||    
T  27756275 attatagcaaattgtgttgtgttgttc 27756249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 291
Target Start/End: Original strand, 27824698 - 27824836
Alignment:
Q  153 ttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaa 252  Q
    |||||||||| || | |||  |||||||||||||| ||| ||| | || || ||||||| ||||||   ||||||||| |||||||| |||||||  |||    
T  27824698 ttgtccctcattataccacatcacaactttttgtcccacgtacgagttatccaaaatacaaaaatagctttttgtccaacaaaaatcatataagatcaaa 27824797  T
Q  253 aattattcaacatcataaaaacttgtgatgtgttgttcc 291  Q
    |||||||||| | |||||||  |||| |||| |||||||    
T  27824798 aattattcaataccataaaagtttgtcatgtattgttcc 27824836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 35004159 - 35004313
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||| | |||||||| ||||   || |||  ||||||| |||||| ||| ||||| || ||||||||| |||||||   ||||||| |  |||    
T  35004159 gacaaaaactaaattttttgtctctcatataaccacaacacaactctttgtcccacgtacaagttttctaaaatatcaaaatagatttttgtcaataaaa 35004258  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||| |||||| || ||||| ||||||| |||||||||  |||| |||||||||||    
T  35004259 aattgtataataccaaaaactattcaatatcataaaagtttgttatgtgttgttc 35004313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 3290769 - 3290635
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||||||| || ||| |||  |||||||||||  | ||| || || ||||||||||||||||||||   ||||||||  |||    
T  3290769 ggacaaaaactcatatttttgtcccttaccaaaccacaacacaacttttt--cccacgtataagttgtctaaaataccaaaatagcattttgtccctcaa 3290672  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaa 271  Q
    ||||| ||||| ||||| ||||||||||  |||||||    
T  3290671 aaatcatataaaacaaacaattattcaatgtcataaa 3290635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 289
Target Start/End: Original strand, 5650735 - 5650888
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  ||||||||| |||||||||||||  ||||||| ||| ||| |||||| ||||||   ||||||||||| ||   |||||||||||| |    
T  5650735 gacaaaaactgaaatttttgttcctcactaaatcatagcacaacatttggtctcacatataaattgcgcaaaataccaaagtagctttttgtccaccaca 5650834  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||| ||| ||||  | |||| |||||| | || ||||| |||| || |||||||    
T  5650835 aattgtacaagatcagaaatcattcaataccacaaaaatttgtcatttgttgtt 5650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 14808045 - 14808157
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| || |  ||||||||  |||||||||||  |||  ||| ||||||||||||||| ||    
T  14808045 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaag-taccaaaataacatttcatcccccaaaaatcgtataaaac 14808143  T
Q  249 aaaaaattattcaa 262  Q
     |||||||||||||    
T  14808144 taaaaattattcaa 14808157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 32614035 - 32614091
Alignment:
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattat 258  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||| |||||||||    
T  32614035 tctaaaatataaaaataactttttgtccaccaaaaatcgtataagaccaaaaattat 32614091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 15400654 - 15400736
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 256  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||||| ||||||||||| || | || |||| ||||||||||||    
T  15400654 cacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaaatt 15400736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 15412441 - 15412523
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 256  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||||| ||||||||||| || | || |||| ||||||||||||    
T  15412441 cacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaaatt 15412523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 15428035 - 15428117
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 256  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||||| ||||||||||| || | || |||| ||||||||||||    
T  15428035 cacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaaatt 15428117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 10552789 - 10552749
Alignment:
Q  222 ttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  10552789 ttttgtccaccaaaaatcgtataagatcaaaaattattcaa 10552749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 13412710 - 13412644
Alignment:
Q  222 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgt 288  Q
    |||||||||| ||||||| |||||||  ||||||||||||| |  ||||||| |||| |||||||||    
T  13412710 ttttgtccacaaaaaatcatataagatgaaaaattattcaatactataaaaatttgtcatgtgttgt 13412644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 29203043 - 29203104
Alignment:
Q  222 ttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 283  Q
    |||||||||| |||| || ||||||||||| |||| ||||| |||||||||| |||| ||||    
T  29203043 ttttgtccacaaaaattcatataagacaaataattgttcaatatcataaaaatttgtcatgt 29203104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 6208981 - 6209049
Alignment:
Q  194 acaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||| ||||||  | | |||||||| ||| |||||| ||||||||| ||| |||||    
T  6208981 acaaattgtctaaaatatcaaaatggtatattgtccactaaacatcgtacaagacaaaacattgttcaa 6209049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 8570257 - 8570313
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtcca 230  Q
    |||||||||||||||||   |||||||||| || ||| ||||||| |||||||||||    
T  8570257 cacaactttttgtcacaagaacaaattgtccaacatatcaaaatagtcttttgtcca 8570313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 28068868 - 28068787
Alignment:
Q  175 acaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattat 258  Q
    |||| ||||||||  || ||||| | || ||||||||||||||| |  |||||||||||||| | ||||||||| |||||||||    
T  28068868 acaattttttgtcttacgtacaagtggtataaaataccaaaatagt--tttgtccaccaaaagtggtataagaccaaaaattat 28068787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 273
Target Start/End: Original strand, 2302 - 2473
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  2302 ttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttg 2401  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||||||||||| | ||||||||   ||||||| ||||| ||||||||||| ||||  |||||||||    
T  2402 tctaaaataccaaaatagttttttgtcccataaaaatcctataaaacaaaaaattactcaatgtcataaaaa 2473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 269
Target Start/End: Complemental strand, 3964421 - 3964255
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||| |||||||||||||| || |||| | | ||||||||||||  |||||||||||||||| ||| ||| ||||||||||||||| ||  ||||| |||    
T  3964421 ttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttg 3964322  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcata 269  Q
    |||||||||||||||||   ||| |||| ||||||||| ||||| ||| |||||||||||| ||||||    
T  3964321 tctaaaataccaaaatagcatttcgtcc-ccaaaaatcatataaaacataaaattattcaatatcata 3964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 31883008 - 31883162
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||| |||||  ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| |||||    
T  31883008 gacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 31883107  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||||| ||||||||||||||||  ||||||||| ||||  ||||||||||    
T  31883108 aatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttc 31883162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 3867647 - 3867788
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    |||||||||||||||| ||| ||| |||||||||||||||  || ||||| || ||||||| |||||||||   |||||||| ||||||||| ||||| |    
T  3867647 aatttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagttttctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaa 3867746  T
Q  248 caaaaaattattcaacatcataaaaacttgtgatgtgttgtt 289  Q
    ||| ||||||||||| | ||||||||||||| ||||||||||    
T  3867747 caagaaattattcaataccataaaaacttgtcatgtgttgtt 3867788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 262
Target Start/End: Original strand, 53557770 - 53557907
Alignment:
Q  125 gcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttt 224  Q
    ||||||||  |||||||||||   | ||||||||||||| ||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||   |||    
T  53557770 gcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 53557869  T
Q  225 tgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||  |||||||||||||| ||||||||||| ||||    
T  53557870 tgtccttcaaaaatcgtataaaacaaaaaattactcaa 53557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 28675923 - 28675763
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||| |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  28675923 ttcaggtacaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 28675824  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  28675823 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 28675763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 39052790 - 39052950
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || ||||||||  |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  39052790 ttcaggcacaggacaaactggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttg 39052889  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||| |||||| ||||    
T  39052890 tctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacaacaaattactcaa 39052950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 51925160 - 51925348
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| |||||||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||    
T  51925160 ttcaggtacatgacaaactggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttg 51925259  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    | |  |||||||||||||  ||| |||| ||||||||||||||| ||||||||||||||||   |||||||| |||| ||||| |||||    
T  51925260 tttttaataccaaaataacatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttc 51925348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 273
Target Start/End: Original strand, 20609633 - 20609771
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  20609633 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 20609732  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    ||||||||||  ||||||||||| ||||  |||||||||    
T  20609733 aaatcgtatataacaaaaaattactcaatgtcataaaaa 20609771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 1344706 - 1344819
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  1344706 atttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 1344805  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  1344806 aaaaaattactcaa 1344819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 2135203 - 2135043
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| |||| |||| |||  | |||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||||||     
T  2135203 ttcaggtacaggacaaactagaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaaatta 2135104  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||    |||||||  |||||||||||||| ||||||||||| ||||    
T  2135103 tctaaaataccaaaatagcactttgtccctcaaaaatcgtataaaacaaaaaattactcaa 2135043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 8648543 - 8648659
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  |||| |||| ||| ||||||  ||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  8648543 gacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaataatcttttgtccaccaaa 8648642  T
Q  236 aatcgtataagacaaaa 252  Q
     ||| |||| |||||||    
T  8648643 catcatatatgacaaaa 8648659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 34351320 - 34351480
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||||||||| |||| | ||| ||   ||||||||| | |||| ||||||||||  ||| |||  |||||||||||||| ||||||||| |||    
T  34351320 ttcagggacatgacaaactagaggaaatagacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaactttttgtcgcacatacaagttg 34351419  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||| ||||||||  |||| ||||| |||||||||| ||||| | |||||||||||    
T  34351420 tctaaaatatcaaaataacattttatccacaaaaaatcgtacaagaccataaattattcaa 34351480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 42636402 - 42636510
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||||||||| ||| ||    
T  42636402 atttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtttaaaac 42636501  T
Q  249 aaaaaatta 257  Q
    |||||||||    
T  42636502 aaaaaatta 42636510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 44117072 - 44116912
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||  ||| ||||||||||||||||||| ||| ||||| |||    
T  44117072 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactttttgtcccacgtacaagttg 44116973  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  44116972 tctaaaatacaaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 44116912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 51259732 - 51259892
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  51259732 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttg 51259831  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||  ||||||||   ||||||| ||||| ||||||||||| ||||    
T  51259832 tctaaaataccaaaataacattttgtcccttaaaaatcatataaaacaaaaaattactcaa 51259892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 33364763 - 33364906
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||| ||||||  ||| |||  |||||||||||||| ||| ||||| |||||||||||| |||||||   |||||||| ||||    
T  33364763 ggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaa 33364862  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  33364863 aaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 33364906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 47958417 - 47958544
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| |||  || ||||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  47958417 ggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 47958516  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||| ||||    
T  47958517 aaatcgtataaaacaaaaaattactcaa 47958544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 38213454 - 38213332
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   |||||||| ||||    
T  38213454 ggacaaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataccattttgtcccccaa 38213355  T
Q  235 aaatcgtataagacaaaaaatta 257  Q
    ||||||||||| |||||||||||    
T  38213354 aaatcgtataaaacaaaaaatta 38213332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 44000346 - 44000224
Alignment:
Q  150 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 249  Q
    ||||| |||||||||||| |||  ||||| |||||||| ||| ||||| || ||| |||||| |||||| | |||||||||||||||||||||||||||     
T  44000346 tttttttccctcactaaaccacatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatagttttttgtccaccaaaaatcgtataagacc 44000247  T
Q  250 aaaaattattcaacatcataaaa 272  Q
    ||||||||||||| | |||||||    
T  44000246 aaaaattattcaataccataaaa 44000224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 49748897 - 49749023
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| | ||||||||||||||  ||| |||| |||||    
T  49748897 gacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgttttaaataccaaaataacatttcgtcccccaaa 49748996  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||||||||    
T  49748997 aatcgtataaaacaaaaaattattcaa 49749023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 262
Target Start/End: Original strand, 54622758 - 54622908
Alignment:
Q  112 tgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatac 211  Q
    ||||||| || |||||| |||  |||||||||||   ||||||||| ||||| ||| |||  ||||||||||| || ||| ||||| |||||||||||||    
T  54622758 tgacaaactaaatgcaagggacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttttatcccacgtacaagttgtctaaaatac 54622857  T
Q  212 caaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||   ||| |||| ||||||||||||||| ||||||||||||||||    
T  54622858 caaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaa 54622908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 34026766 - 34026629
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  ||||| |||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  34026766 gacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 34026667  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||| ||||||||||| |||| | ||||||||    
T  34026666 aatcgtataaaacaaaaaattactcaataccataaaaa 34026629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 5442376 - 5442264
Alignment:
Q  150 tttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagaca 249  Q
    |||||||||||||| ||||||| ||||||||||||||| ||| |||||  ||||||||||| |||||||   |||| |||  |||||||||||||| |||    
T  5442376 tttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagctgtctaaaatatcaaaatagcattttatccctcaaaaatcgtataaaaca 5442277  T
Q  250 aaaaattattcaa 262  Q
    |||||||||||||    
T  5442276 aaaaattattcaa 5442264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 12349123 - 12349283
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||| ||||| ||| ||| |||||||||| |||| ||| ||||| |||    
T  12349123 ttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttatgtcccacgtacaagttg 12349222  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  12349223 tctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 12349283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 40094603 - 40094447
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||  ||| ||||||||||||||||||||||||||   ||||||||  |||    
T  40094603 ggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaataccaaaatagcattttgtccctcaa 40094504  T
Q  235 aaatcgtataagacaaaaaattattcaacatcataaaaa-cttgtgatgtgttgttc 290  Q
    |||||| |||| ||||||||||| ||||   ||||||||  |||| |||||||||||    
T  40094503 aaatcgcataaaacaaaaaattactcaatgccataaaaattttgtcatgtgttgttc 40094447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 41694925 - 41695029
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||||||| ||||||||| |||||||||||||  |||||   |||||||| ||||||||||||||| ||||||||||||||||  |||||||||    
T  41694925 cacaactttttgtcccacatacaagttgtctaaaatactgaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa 41695024  T
Q  274 cttgt 278  Q
     ||||    
T  41695025 tttgt 41695029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 20255144 - 20255018
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| ||| ||||||||| ||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||    
T  20255144 ggacaaaaactcatatttttgtccctcaccaaaccacagcacaacttcttgtcccac-tacaagttgtctaaaataccaaaataacattttgtccctcaa 20255046  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||| ||||| ||||||||||| ||||    
T  20255045 aaatcttataaaacaaaaaattactcaa 20255018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 21221345 - 21221472
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  21221345 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaa 21221444  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    |||| |||||| ||||||||||| ||||    
T  21221445 aaattgtataaaacaaaaaattactcaa 21221472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Original strand, 26282372 - 26282499
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||| ||||  ||| ||| ||||||||||||||| ||| || || ||||||||||||||||||||   ||||||||  |||    
T  26282372 ggacaaaaacttatatttttgtctctcatcaaaccacagcacaactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtccctcaa 26282471  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| ||||||||||||||||    
T  26282472 aaatcgtataaaacaaaaaattattcaa 26282499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 29584975 - 29584848
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||    
T  29584975 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccttcaa 29584876  T
Q  235 aaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||| | ||||||||| ||||    
T  29584875 aaatcgtataaaataaaaaattactcaa 29584848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 4851455 - 4851568
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||  |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  |||||||||||||| ||    
T  4851455 atttttgtccctcaccaacccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaac 4851554  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||| ||||    
T  4851555 aaaaaattactcaa 4851568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 25860407 - 25860528
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||||||| |||||   |||||| | |||||    
T  25860407 gacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaataccgaaatagcattttgttctccaaa 25860506  T
Q  236 aatcgtataagacaaaaaatta 257  Q
    |||||||||| |||||||||||    
T  25860507 aatcgtataaaacaaaaaatta 25860528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 29646152 - 29646047
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||| |||||||||||||||   |||||||| ||||||||||||||| ||    
T  29646152 atttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtttaaaataccaaaatagcattttgtcccccaaaaatcgtataaaac 29646053  T
Q  249 aaaaaa 254  Q
    ||||||    
T  29646052 aaaaaa 29646047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 262
Target Start/End: Original strand, 3864627 - 3864786
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||| | ||| |||  |||||||||||||| ||| ||||| |||    
T  3864627 ttcaggtacaagacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttg 3864726  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||||||||||   |||||||| ||||||||| ||||| ||||||||||| ||||    
T  3864727 tctaaaataccaaaatagcattttgtcc-ccaaaaatcatataaaacaaaaaattactcaa 3864786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 24571414 - 24571254
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||  ||||| |||    
T  24571414 ttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttg 24571315  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||   |||||||| |||||||||| |||| |||| |||||| ||||    
T  24571314 tctaaaatacaaaaataggattttgtcccccaaaaatcgaataaaacaacaaattactcaa 24571254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 25927312 - 25927432
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaa 234  Q
    |||||||||||   |||||||||||| || ||| |||  |||||||||||||| ||| ||||| |||||||||||||||||||||  |||||| |  |||    
T  25927312 ggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgttcctcaa 25927411  T
Q  235 aaatcgtataagacaaaaaat 255  Q
    ||||||||||| |||||||||    
T  25927412 aaatcgtataaaacaaaaaat 25927432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 278
Target Start/End: Complemental strand, 25954549 - 25954408
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||| ||||| |||| || ||||||||||||||| |||||| || |||| |||||||| || ||||  ||| |||| |||||    
T  25954549 gacaaaaactcatatttttgtctctcaccaaattacagcacaactttttgtctcacatataagttgtttaaaatactaatataacatttcgtcc-ccaaa 25954451  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    || ||||||| | |||||||||||||| |||||||||| ||||    
T  25954450 aagcgtataaaataaaaaattattcaatatcataaaaatttgt 25954408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 14155447 - 14155547
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    |||||||||| ||| |||| |||||||||||||||   |||||||||||||| ||  ||||| |||||||||||| |||||||||||||||||||| |||    
T  14155447 gacaaaaact-gaaattttatccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaatatcaaaataatcttttgtccacaaaa 14155545  T
Q  236 aa 237  Q
    ||    
T  14155546 aa 14155547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 19906895 - 19906779
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||  ||||| | || |||| |||  |||||||||||  |||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||    
T  19906895 ttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttg 19906796  T
Q  202 tctaaaataccaaaata 218  Q
    ||||||| |||||||||    
T  19906795 tctaaaacaccaaaata 19906779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 272
Target Start/End: Complemental strand, 51296714 - 51296544
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||| | || |||| |||  |||||||||||   ||||||||||||||| ||| |||  ||||| ||||||||  |  ||||| |||    
T  51296714 ttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttg 51296615  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||| ||||||   |||||||| | ||||||||||||| ||||||||||| |||| | |||||||    
T  51296614 tctaaaatacaaaaatagcattttgtccccaaaaaatcgtataaaacaaaaaattactcaataccataaaa 51296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 50386455 - 50386568
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    |||||||| |||||  ||| ||| |||||||||||||||  || ||||| |||||||||||| |||||||   |||||| | |||||||| |||||| ||    
T  50386455 atttttgtgcctcaacaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgttccccaaaaattgtataaaac 50386554  T
Q  249 aaaaaattattcaa 262  Q
    ||||||||||||||    
T  50386555 aaaaaattattcaa 50386568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 290
Target Start/End: Original strand, 28624918 - 28625059
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    ||||||||||||||| |||| |||  || || ||||||||  || || || || |||||||||| ||||| || ||| ||| |||||||||| |||||||    
T  28624918 aatttttgtccctcattaaagcacaacataaatttttgtcctacgtataagttatctaaaatacaaaaatcat-tttagtctaccaaaaatcttataaga 28625016  T
Q  248 caaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    ||||||||||||||| | |||||||  ||||  ||||||||||    
T  28625017 caaaaaattattcaataccataaaagtttgtcttgtgttgttc 28625059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 32621924 - 32621842
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||||| ||  ||||| |||||||||||||||||||||| | ||||||| ||||||| |||||  ||||||||||||||||    
T  32621924 tttttgtcccatgtacaagttgtctaaaataccaaaataatatgttgtccatcaaaaattgtatacaacaaaaaattattcaa 32621842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 21374016 - 21373947
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||    
T  21374016 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata 21373947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 389479 - 389396
Alignment:
Q  199 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgt 283  Q
    |||||||||||||||||||| |||||| |||| | |||||||| || ||||||||| | |||||||||||||||  |||||||||    
T  389479 ttgtctaaaataccaaaatagtcttttatccatccaaaatcgtgtaggacaaaaaa-tgttcaacatcataaaagtttgtgatgt 389396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 3695316 - 3695404
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||| ||||||| ||| ||||| |||||||||||||||||||| | |||| ||| |||||||| |||||| |||| |||||| ||||    
T  3695316 cacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtattttatcccccaaaaattgtataaaacaacaaattactcaa 3695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 10747266 - 10747174
Alignment:
Q  187 cacacatacaaattgtctaaaataccaaaataatcttttgtccacc-aaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||| ||||| |||||||||||| |||||||   |||||||| || ||||||||||||| ||||||||||||||||  ||||||||| ||||    
T  10747266 cacacgtacaagttgtctaaaatatcaaaatagcattttgtccccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgt 10747174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 50678898 - 50678815
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    |||||||||||   ||||||||| ||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||    
T  50678898 ggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaata 50678815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 44267800 - 44267718
Alignment:
Q  177 aactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattatt 259  Q
    |||||||| || ||||||||||||||||||||||| ||||||   ||| |||  ||||||||| ||||| |||||||||||||    
T  44267800 aactttttatcccacatacaaattgtctaaaatacaaaaatagcatttcgtcatccaaaaatcatataaaacaaaaaattatt 44267718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 286
Target Start/End: Complemental strand, 49107273 - 49107135
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    |||| ||||||  ||||||| |||  || |||||||||| ||   |||||||||| ||||||||||||||| ||||   ||||||||| || ||||||||    
T  49107273 aattcttgtccaccactaaaccacatcataactttttgttactactacaaattgtttaaaataccaaaatagtcttggatccaccaaacatagtataaga 49107174  T
Q  248 caaaaaattattcaacatcataaaaacttgtgatgtgtt 286  Q
    ||||||||| ||| | |||||| ||  |||| |||||||    
T  49107173 caaaaaattgttcgatatcatataagtttgtcatgtgtt 49107135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 25395650 - 25395577
Alignment:
Q  199 ttgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||| ||||||||| || |||  ||||||||    
T  25395650 ttgtctaaaataccaaaataacattttgttcactaaaaatcgtataaaacaaaaaataatgcaatgtcataaaa 25395577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 8067055 - 8067179
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    ||||| ||||| |||| ||||||  | ||||||||||||||||| ||||| || | ||||||| |||||||   |||||||||| | ||||| |||||||    
T  8067055 aatttgtgtccttcacaaaatcatagtacaactttttgtcacacgtacaagttatataaaatatcaaaatagctttttgtccactagaaatcatataaga 8067154  T
Q  248 caaaaaattattcaacatcataaaa 272  Q
      |||||| |||||| | |||||||    
T  8067155 tcaaaaatcattcaataccataaaa 8067179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 16145873 - 16145961
Alignment:
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    |||||||||| |||||| | |||||||||||||||||| || ||||  |||| |||||||| | |||||| | |||| |||||||||||    
T  16145873 tctaaaatacaaaaatagttttttgtccaccaaaaatcatacaagaacaaaacttattcaaaaccataaatatttgtcatgtgttgttc 16145961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 22484695 - 22484871
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||||||||| | || |||| |||   ||||||| ||| ||||||||| |||  | |||  ||  |||||||||||||| ||| || || |||    
T  22484695 ttcagggacatgacaaactggaggcaagggacatgacaaaagctacaatttttgttccttgccaaactacaacacaactttttgtcccacgtataagttg 22484794  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    |||||||||| ||||||   ||| |||  ||||||||  ||||| ||| |||||||||||| | |||||||| ||||    
T  22484795 tctaaaatacaaaaatagcatttcgtcacccaaaaattatataatacagaaaattattcaataccataaaaatttgt 22484871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 19190716 - 19190653
Alignment:
Q  182 tttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataa 245  Q
    |||||| ||||||||| || |||||||||| |||||| | ||||| ||||||||||||||||||    
T  19190716 tttgtctcacatacaagttatctaaaatacaaaaatagttttttgaccaccaaaaatcgtataa 19190653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 24721585 - 24721502
Alignment:
Q  135 ggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaata 218  Q
    |||||||||||| |||||| || |||||  ||| |||  ||||||||||| || ||||||||| |||||||||| |||||||||    
T  24721585 ggacaaaaactaaaattttggtacctcaacaaaccacaacacaactttttatcccacatacaagttgtctaaaacaccaaaata 24721502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 32538586 - 32538641
Alignment:
Q  201 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 256  Q
    |||||||||| ||||||||||||||||||| |||| || |||||||| ||||||||    
T  32538586 gtctaaaatatcaaaataatcttttgtccatcaaatattgtataagataaaaaatt 32538641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 47041559 - 47041644
Alignment:
Q  190 acatacaaattgtctaaaataccaaaataa---tcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    ||||||||||||||||||||||||||||||   || |||||| ||| |||||  ||| ||| |||||| ||||||| |||||||||    
T  47041559 acatacaaattgtctaaaataccaaaataatagtcatttgtctaccgaaaattttatgagataaaaaactattcaatatcataaaa 47041644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 51813449 - 51813371
Alignment:
Q  178 actttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaatt 256  Q
    |||||||||  || |||||| |||| ||||||||||||||||  |||||||  || |||||| ||||||||||||||||    
T  51813449 actttttgttccaaatacaagttgtataaaataccaaaataacattttgtctgccgaaaatcttataagacaaaaaatt 51813371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 45690924 - 45691012
Alignment:
Q  173 gcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||| |||  | || |||||||||||||||||||    ||| |||| ||||||||||||||| || |||||||||||||    
T  45690924 gcacaactttttgtctcacgcataagttgtctaaaataccaaaatcgcatttcgtcctccaaaaatcgtataaaac-aaaaattattcaa 45691012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 53046692 - 53046753
Alignment:
Q  201 gtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    ||||||||||||||||||   ||||||||  |||||||||||||| ||||||||||| ||||    
T  53046692 gtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaa 53046753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 30258895 - 30258835
Alignment:
Q  213 aaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||| ||||||||| || |||||||||||||||| |||||||||| || | ||||||||    
T  30258895 aaaatagtcttttgtctacaaaaaatcgtataagaccaaaaattattgaataccataaaaa 30258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 27176504 - 27176417
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||| |||| || ||| || |||||||||||||||  |||| ||  ||||||||||| |||||| |||||||  |||||||||||||    
T  27176504 cacaacgttttatcccacgtataaattgtctaaaatattaaaacaactttttgtccacc-aaaatcatataagattaaaaattattcaa 27176417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 36772081 - 36772017
Alignment:
Q  174 cacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaat 238  Q
    |||||| |||||| |||  ||||| ||||||||||||| |||||   ||||||||||||||||||    
T  36772081 cacaaccttttgtaacaagtacaagttgtctaaaatacgaaaattgacttttgtccaccaaaaat 36772017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 39215499 - 39215547
Alignment:
Q  180 tttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtc 228  Q
    |||||||| ||| ||||| |||||||||||||||||||||  |||||||    
T  39215499 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 39215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 33554 - 33678
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    |||| ||||||||||  ||| |||  |||||||||||||| ||| |||||||||| |||||||||||||||  |||||||||| ||||| | ||||||||    
T  33554 aattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaataggcttttgtccatcaaaacttgtataaga 33653  T
Q  248 caaaaaattattcaacatcataaaa 272  Q
    | ||||||||||||| |||||||||    
T  33654 ccaaaaattattcaatatcataaaa 33678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 1641 - 1795
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  |||||||||||||||| ||| |||  |||||||||||||| ||| ||||| |||||||||| |||||||||   ||| ||||  ||||    
T  1641 gacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaaaaccaaaatagcatttcgtccctcaaa 1740  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttgttc 290  Q
    | || ||||| |||||||||||||||| | |||||||| ||||  ||||||||||    
T  1741 agtcatataaaacaaaaaattattcaataccataaaaatttgttctgtgttgttc 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 51536 - 51400
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||| |||||||   ||||||||  ||||    
T  51536 gacaaaaactcatatttttgtccctcac-aaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaa 51438  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||| ||||||||||| ||||  |||||||||    
T  51437 aatcgtataaaacaaaaaattactcaatgtcataaaaa 51400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 278
Target Start/End: Original strand, 5451 - 5580
Alignment:
Q  149 atttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagac 248  Q
    ||||||||||||||| ||| |||  |||||||||||||| ||||||||| ||| ||||||||| |||||||  ||| |  | ||||||||||||||| ||    
T  5451 atttttgtccctcaccaaaccacatcacaactttttgtcccacatacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaac 5550  T
Q  249 aaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||||||||||  ||||||||| ||||    
T  5551 aaaaaattattcaatgtcataaaaatttgt 5580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 13651 - 13827
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    ||||||||||  ||||| | || |||| |||| |||||||||||  |||||||||||||||| ||| ||| | ||||||||||||| ||| ||||| |||    
T  13651 ttcagggacagaacaaactggaggcaagggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttg 13750  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaaacttgt 278  Q
    ||||||| |||||||||   ||  |||| ||||||| | ||||| |||| ||||||||||| | |||||||| ||||    
T  13751 tctaaaacaccaaaatagcattccgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgt 13827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 102047 - 101921
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||   |||    
T  102047 gacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaa 101948  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  101947 aatcgtataaaacaaaaaattactcaa 101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 372962 - 373088
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| ||   |||||||||||||| ||| ||||| ||||||||||||||||||||   ||||||||  ||||    
T  372962 gacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtccctcaaa 373061  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  373062 aatcgtataaaacaaaaaattactcaa 373088  T

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Target: scaffold0054 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 287
Target Start/End: Complemental strand, 20005 - 19854
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  |||| ||||| ||||||||| ||||| ||||||||||||  ||| ||||| |||| | ||||||||||||| |||||||| || ||||    
T  20005 gacaaaaactgaaattcttgtcactcactaaaccactgtacaactttttgtttcacgtacaagttgtttgaaataccaaaatagtcttttgttcatcaaa 19906  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaacttgtgatgtgttg 287  Q
    ||||| ||||  | ||| ||||||||| | |||||||  |||| ||||||||    
T  19905 aatcgcataacgccaaatattattcaataccataaaagtttgtcatgtgttg 19854  T

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Target: scaffold0054; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 23673 - 23549
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   |||||||||| |||| ||| ||| ||||||||||||||| ||| ||||| |||||||||||||||||||||    ||||||  ||||    
T  23673 gacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataa--cattgtccctcaaa 23576  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||||||||| ||||||||||| ||||    
T  23575 aatcgtataaaacaaaaaattactcaa 23549  T

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Target: scaffold0360 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 13589 - 13703
Alignment:
Q  148 aatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataaga 247  Q
    ||||| |||| |||||||||  ||  |||||||||||||||||  ||||| ||||||| |||||||||||| | ||||||||| ||||||||||||||||    
T  13589 aatttgtgtctctcactaaaatacgacacaactttttgtcacatgtacaagttgtctagaataccaaaatagtattttgtccatcaaaaatcgtataaga 13688  T
Q  248 caaaaaattattcaa 262  Q
    | || ||||| ||||    
T  13689 ccaataattaatcaa 13703  T

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Target: scaffold0360; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 15379 - 15512
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||  ||||| ||||||||||||||||||||   |||    |  ||||    
T  15379 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattt----cctcaaa 15474  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaaa 273  Q
    |||||||||| ||||||||||| ||||  |||||||||    
T  15475 aatcgtataaaacaaaaaattactcaatgtcataaaaa 15512  T

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Target: scaffold0027 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 15270 - 15144
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||   ||||||||||| ||| ||| |||  |||||||||||||| ||| ||||| ||||||||||||| |||||| | |||||||| |||||    
T  15270 gacaaaaactcatatttttgtcccccaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaatagtattttgtcccccaaa 15171  T
Q  236 aatcgtataagacaaaaaattattcaa 262  Q
    |||| ||||| |||| |||||| ||||    
T  15170 aatcttataaaacaacaaattactcaa 15144  T

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Target: scaffold0021 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 272
Target Start/End: Original strand, 108303 - 108436
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||| | || |||||||  |||||||| |||   ||||||||||||| ||  | ||||||||||||| |||||||||||    || |||| ||||    
T  108303 gacaaaaaccaaaaattttgtcattcactaaagcacaatacaactttttgtctcaagtgcaaattgtctaaagtaccaaaataac---ttatccatcaaa 108399  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||||||| |||||||||||| |||||||||    
T  108400 aatcgtataagacataaaattattcaatatcataaaa 108436  T

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Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 272
Target Start/End: Original strand, 111073 - 111206
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaa 235  Q
    ||||||||||  ||||||||||  |||||||| |||   | ||||||||||| ||  | |||||| |||||| |||||||||||    || |||||||||    
T  111073 gacaaaaactgaaatttttgtcattcactaaagcacaatagaactttttgtctcaagtgcaaattatctaaagtaccaaaataac---ttatccaccaaa 111169  T
Q  236 aatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||||||| |||||||||||| |||||||||    
T  111170 aatcgtataagacataaaattattcaatatcataaaa 111206  T

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Target: scaffold0957 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 2460 - 2648
Alignment:
Q  102 ttcagggacatgacaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattg 201  Q
    |||||| ||| |||||||| || | || |||  |||||||||||   || ||||||||| || ||| |||  ||||||| || ||| ||| ||||| |||    
T  2460 ttcaggtacaagacaaattggaggaaagggacaggacaaaaactcatatctttgtccctaaccaaaccacaacacaactatt-gtctcacgtacaagttg 2558  T
Q  202 tctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcat-aaaaacttgtgatgtgttgttc 290  Q
    |||||||||||||||||   |||||||| ||||||||||||||| |||||||||||  |||  |||| ||||| |||| |||||||||||    
T  2559 tctaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattacccaatctcataaaaaatttgtcatgtgttgttc 2648  T

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Target: scaffold0062 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 3682 - 3762
Alignment:
Q  192 atacaaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||| || |||||||||| |||||| | |||| ||||||||||||| ||||||| |||||||||||||| |||||||||    
T  3682 atacaagttatctaaaatacaaaaatagttttttatccaccaaaaatcatataagataaaaaattattcaatatcataaaa 3762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 262
Target Start/End: Original strand, 4555 - 4703
Alignment:
Q  114 acaaattagatgcaatggattggacaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaatacca 213  Q
    ||||||| || |||| |||  |||||||||||   ||||||||||||||| ||| |||  |||||||||||||| ||| || || |||||||||| | ||    
T  4555 acaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatca 4654  T
Q  214 aaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaa 262  Q
    |||||   |||||||    ||||||||||||| ||||||||||| ||||    
T  4655 aaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaa 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 7456 - 7586
Alignment:
Q  136 gacaaaaactagaatttttgtccctcactaaatcactgcacaac---tttttgtcacacatacaaattgtctaaaataccaaaata-atcttttgtccac 231  Q
    ||||||||||  |||| ||||| |||||||||||||  |||||    |||||||| ||| ||| | |||||||||||||||||||| || |||||||||     
T  7456 gacaaaaactgaaattcttgtctctcactaaatcacaacacaagatttttttgtctcacgtacgagttgtctaaaataccaaaatagattttttgtccat 7555  T
Q  232 caaaaatcgtataagacaaaaaattattcaa 262  Q
     ||||||  |||||||| |||||||||||||    
T  7556 taaaaattatataagaccaaaaattattcaa 7586  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 42949 - 43073
Alignment:
Q  137 acaaaaactagaatttttgtccctcactaaatcactgcacaactttttgtcacacatacaaattgtctaaaataccaaaataatcttttgtccaccaaaa 236  Q
    |||||||||  ||||| |||||||||| ||| |||  |||||||||||||| ||| ||| |||||||||||| |||||||||   | |||||| | || |    
T  42949 acaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtac-aattgtctaaaacaccaaaatagcatgttgtccccaaaca 43047  T
Q  237 atcgtataagacaaaaaattattcaa 262  Q
    ||| ||||| |||| |||||||||||    
T  43048 atcatataaaacaagaaattattcaa 43073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 19860 - 19784
Alignment:
Q  196 aaattgtctaaaataccaaaataatcttttgtccaccaaaaatcgtataagacaaaaaattattcaacatcataaaa 272  Q
    |||||||||||||| | |||||| | |||||| | | |||||||||| |||||||||||||||| |  |||||||||    
T  19860 aaattgtctaaaattcaaaaatagttttttgtacgcaaaaaatcgtacaagacaaaaaattatttagtatcataaaa 19784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 99841 - 99897
Alignment:
Q  199 ttgtctaaaataccaaaa-taatcttttgtccaccaaaaatcgtataagacaaaaaa 254  Q
    |||||||||||||||||| |||  |||| ||||||||| |||||| |||||||||||    
T  99841 ttgtctaaaataccaaaaataactttttatccaccaaacatcgtacaagacaaaaaa 99897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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