View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15627_high_28 (Length: 301)
Name: NF15627_high_28
Description: NF15627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15627_high_28 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 6315076 - 6315347
Alignment:
| Q |
1 |
acaactgcacaacaatgattatgaatggtttaactatggtgttgtggaatatatggaagagaagaagtaagcagctttggaatatgcctggcaacaatcc |
100 |
Q |
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| T |
6315076 |
acaactgcacaacaatgattatgaatggtttaactatggtgttgtggaatatatggaagagaagaagtaagcagctttggaatatgcctggcaacaatcc |
6315175 |
T |
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| Q |
101 |
aacaagctatttagttccctgttgttttgaaatggcaaaagaaaaagcagcaaaatacttagaatttggagattaacacgaggcatatagtagatggaaa |
200 |
Q |
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| T |
6315176 |
aacaagctatttagttccctgttgttttgaaatggcaaaagaaaaagcagcaaaatacttagaatttggagattaacacgaggcatatagtagatggaaa |
6315275 |
T |
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| Q |
201 |
aaaccacaacaggggtacttgtcatatggcaacaggtggattagtagcaacggagacttgttgggcagatgg |
272 |
Q |
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| T |
6315276 |
agaccacaacaggggtacttgtcatatggcaacaggtggattagtagcaacggagacttgttgggcagatgg |
6315347 |
T |
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