View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15627_high_8 (Length: 381)
Name: NF15627_high_8
Description: NF15627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15627_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 32 - 358
Target Start/End: Original strand, 5941682 - 5942008
Alignment:
| Q |
32 |
accataacattgattaataaaataatttgaatgattaaggcaggtgaggattaaataagagaaaattgagaacagaaataagagaaaattaactcattac |
131 |
Q |
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| T |
5941682 |
accataacattgattaataaaataatttgaatgattaaggcaggtgaggattaaataagagaaaattgagaacagaaataagagaaaattaactcattac |
5941781 |
T |
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| Q |
132 |
aacaacttcttatttatgttaccctaatatacaaaggaaaagataattcgtccggtacaatacattataacatcaataaaaattgtttataacactgtct |
231 |
Q |
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| T |
5941782 |
aacaactccttatttatgttaccctaatatacaaaggaaaagataattcgtccggtacaatacattataacatcaataaaaattgtttataacactgtct |
5941881 |
T |
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| Q |
232 |
ccaaaatattaaattgaccatacaataatagtggaccaacattgataggttacatttcttgtagttttgtacatattaaaactaacattagctttaatgt |
331 |
Q |
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| T |
5941882 |
ccaaaatattaaattgaccatacaataatagtggaccaacattgataggttacatttcttgtagttttgtacatattaaaaccaacattagctttaatgt |
5941981 |
T |
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| Q |
332 |
acaccactttatttgaaactgatgatg |
358 |
Q |
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| T |
5941982 |
acaccactttatttgaaactgatgatg |
5942008 |
T |
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