View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15629_high_10 (Length: 382)
Name: NF15629_high_10
Description: NF15629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15629_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 31 - 361
Target Start/End: Complemental strand, 53597736 - 53597406
Alignment:
| Q |
31 |
aacttggtaagagcatcaaaatgggaacttccactgatgtgggattaccagcttgaacaatatgcaaggtggtgggctagtcaaagaaaaccagattgca |
130 |
Q |
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| T |
53597736 |
aacttggtaagagcttcaaaatgggaacttccactgatgtgggattaccagcttgaacaatatgcaaggtggtgggctagtcaaagaaaaccagattgca |
53597637 |
T |
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| Q |
131 |
aagtggaacattcttttcctgaagatggtttcaaattaggagagaatatatattggggtagtggctctgattggacaccaacggatgctgtaaaagcttg |
230 |
Q |
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| T |
53597636 |
aagtggaacattcttttcctgaagatggtttcaaattaggagagaatatatattggggtagtggctctgattggacaccaacggatgctgtaaaagcttg |
53597537 |
T |
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| Q |
231 |
ggctgatgaagagaaatattacacatatgtgactaattcatgtgtatctggccaaatgtgtggacattatactcagattgtgtggaaaagtactagaaga |
330 |
Q |
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| T |
53597536 |
ggctgatgaagagaaatattacacatatgtgactaattcatgtgtatctggtcaaatgtgtggacattatactcagattgtgtggaaaagtactagaaga |
53597437 |
T |
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| Q |
331 |
attggttgtgcaagagttgtgtgtgatgatg |
361 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
53597436 |
attggttgtgcaagagttgtgtgtgatgatg |
53597406 |
T |
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