View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15629_high_11 (Length: 369)

Name: NF15629_high_11
Description: NF15629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15629_high_11
NF15629_high_11
[»] chr3 (76 HSPs)
chr3 (1-239)||(1321161-1321399)
chr3 (1-240)||(26720267-26720506)
chr3 (1-240)||(5522914-5523153)
chr3 (8-238)||(5191374-5191604)
chr3 (4-240)||(10956329-10956564)
chr3 (4-240)||(18099473-18099708)
chr3 (1-240)||(22114604-22114843)
chr3 (4-239)||(32264345-32264580)
chr3 (7-239)||(24176999-24177231)
chr3 (1-239)||(11162891-11163108)
chr3 (4-146)||(10958625-10958767)
chr3 (1-240)||(11170144-11170362)
chr3 (1-116)||(10084692-10084807)
chr3 (1-116)||(10191612-10191727)
chr3 (7-240)||(18097206-18097423)
chr3 (1-137)||(3859350-3859486)
chr3 (7-146)||(45882752-45882891)
chr3 (7-115)||(18162508-18162616)
chr3 (7-114)||(48361975-48362082)
chr3 (53-240)||(38210066-38210252)
chr3 (40-239)||(53896556-53896754)
chr3 (5-129)||(46966938-46967062)
chr3 (53-239)||(50493676-50493861)
chr3 (4-114)||(24979552-24979662)
chr3 (1-115)||(35777266-35777379)
chr3 (40-153)||(25388683-25388795)
chr3 (8-113)||(32218941-32219046)
chr3 (40-206)||(5899492-5899657)
chr3 (40-240)||(6063808-6064007)
chr3 (4-72)||(15780747-15780815)
chr3 (149-240)||(32218835-32218926)
chr3 (40-154)||(5886069-5886182)
chr3 (110-208)||(10192401-10192498)
chr3 (4-84)||(12268268-12268348)
chr3 (40-115)||(38889861-38889936)
chr3 (110-208)||(10085481-10085578)
chr3 (149-239)||(48362096-48362186)
chr3 (40-115)||(6719471-6719546)
chr3 (7-86)||(13893267-13893345)
chr3 (122-239)||(35777163-35777280)
chr3 (9-63)||(38889935-38889989)
chr3 (1-116)||(6066096-6066210)
chr3 (122-206)||(6719532-6719618)
chr3 (5-88)||(16996677-16996760)
chr3 (1-63)||(6719410-6719472)
chr3 (2-63)||(5886181-5886242)
chr3 (2-63)||(5899656-5899717)
chr3 (5-61)||(26762863-26762919)
chr3 (1-63)||(6063747-6063809)
chr3 (6-63)||(25388794-25388851)
chr3 (161-240)||(7606886-7606964)
chr3 (5-38)||(11007978-11008011)
chr3 (4-84)||(23633334-23633415)
chr3 (122-239)||(38889757-38889875)
chr3 (5-61)||(7768474-7768530)
chr3 (6-62)||(38210265-38210321)
chr3 (1-146)||(4308580-4308725)
chr3 (5-60)||(27420543-27420598)
chr3 (5-71)||(47883178-47883245)
chr3 (1-146)||(51727305-51727450)
chr3 (4-39)||(53597161-53597196)
chr3 (6-59)||(455802-455856)
chr3 (6-59)||(458179-458233)
chr3 (6-59)||(746650-746704)
chr3 (6-59)||(4104203-4104257)
chr3 (6-59)||(10621846-10621900)
chr3 (1-63)||(50493895-50493957)
chr3 (1-63)||(53896495-53896557)
chr3 (5-61)||(10949555-10949612)
chr3 (194-239)||(18162405-18162450)
chr3 (7-59)||(42990181-42990234)
chr3 (194-239)||(45882659-45882704)
chr3 (6-38)||(25533355-25533387)
chr3 (1-37)||(25690655-25690691)
chr3 (1-37)||(27101484-27101520)
chr3 (1-37)||(27101559-27101595)
[»] chr2 (37 HSPs)
chr2 (1-239)||(42064231-42064469)
chr2 (5-240)||(21521000-21521235)
chr2 (4-240)||(27104514-27104750)
chr2 (9-236)||(6259124-6259351)
chr2 (1-240)||(24162513-24162753)
chr2 (1-150)||(13910345-13910494)
chr2 (4-239)||(22407713-22407948)
chr2 (1-240)||(19502312-19502551)
chr2 (1-239)||(19504646-19504884)
chr2 (4-240)||(40032362-40032587)
chr2 (5-115)||(6264450-6264560)
chr2 (6-112)||(18800608-18800713)
chr2 (53-240)||(36559173-36559359)
chr2 (9-128)||(22287645-22287764)
chr2 (4-115)||(43623872-43623982)
chr2 (122-240)||(43623968-43624086)
chr2 (5-86)||(28462591-28462671)
chr2 (122-234)||(6264546-6264658)
chr2 (53-239)||(45332490-45332675)
chr2 (122-240)||(18800702-18800820)
chr2 (7-145)||(35107110-35107248)
chr2 (101-239)||(36561539-36561677)
chr2 (53-136)||(36561450-36561532)
chr2 (9-88)||(33603791-33603870)
chr2 (5-61)||(35028473-35028529)
chr2 (5-140)||(37171049-37171183)
chr2 (101-136)||(36561518-36561553)
chr2 (4-84)||(40699180-40699261)
chr2 (7-60)||(45156946-45156999)
chr2 (4-76)||(12342714-12342786)
chr2 (5-39)||(17897547-17897581)
chr2 (6-59)||(23452547-23452601)
chr2 (6-59)||(35215902-35215956)
chr2 (1-63)||(36559076-36559138)
chr2 (1-63)||(36561353-36561415)
chr2 (5-60)||(20589555-20589611)
chr2 (1-37)||(45280286-45280322)
[»] chr7 (49 HSPs)
chr7 (1-240)||(35378-35617)
chr7 (1-240)||(44313-44552)
chr7 (1-239)||(25542281-25542519)
chr7 (1-239)||(3878322-3878563)
chr7 (4-239)||(27306533-27306767)
chr7 (240-366)||(6865584-6865710)
chr7 (1-239)||(1049596-1049813)
chr7 (4-239)||(18567363-18567598)
chr7 (4-239)||(31435351-31435586)
chr7 (1-115)||(40837043-40837158)
chr7 (4-143)||(22392319-22392458)
chr7 (53-240)||(1047318-1047504)
chr7 (11-240)||(26804344-26804551)
chr7 (53-239)||(2935070-2935255)
chr7 (53-240)||(22136877-22137063)
chr7 (53-240)||(40551904-40552090)
chr7 (53-239)||(9027502-9027687)
chr7 (53-240)||(22107866-22108052)
chr7 (53-240)||(40549626-40549812)
chr7 (9-89)||(45366446-45366526)
chr7 (122-239)||(40837144-40837261)
chr7 (9-146)||(42006410-42006545)
chr7 (4-51)||(22251846-22251893)
chr7 (7-63)||(1047239-1047295)
chr7 (240-358)||(661389-661508)
chr7 (5-88)||(6067497-6067580)
chr7 (6-59)||(7351964-7352018)
chr7 (1-59)||(1606399-1606458)
chr7 (4-39)||(6332176-6332211)
chr7 (1-63)||(2935279-2935341)
chr7 (6-59)||(3035646-3035700)
chr7 (4-61)||(7188470-7188528)
chr7 (6-59)||(7349585-7349639)
chr7 (1-63)||(9027405-9027467)
chr7 (6-59)||(11757153-11757207)
chr7 (6-59)||(18345466-18345520)
chr7 (248-298)||(22087824-22087874)
chr7 (1-63)||(22108087-22108149)
chr7 (1-63)||(22137098-22137160)
chr7 (6-59)||(28485491-28485545)
chr7 (6-59)||(38393911-38393965)
chr7 (6-59)||(38396215-38396269)
chr7 (1-63)||(40549847-40549909)
chr7 (1-63)||(40552125-40552187)
chr7 (6-59)||(43253830-43253884)
chr7 (7-59)||(31156218-31156271)
chr7 (9-61)||(6048725-6048777)
chr7 (1-33)||(7092480-7092512)
chr7 (6-38)||(20299405-20299437)
[»] chr4 (64 HSPs)
chr4 (1-236)||(5198217-5198452)
chr4 (1-239)||(31849900-31850138)
chr4 (1-240)||(38408992-38409231)
chr4 (1-235)||(24888594-24888828)
chr4 (1-240)||(22044691-22044931)
chr4 (4-240)||(36919891-36920126)
chr4 (1-239)||(9148054-9148283)
chr4 (1-239)||(5637770-5638006)
chr4 (4-240)||(3824877-3825113)
chr4 (4-207)||(22803038-22803240)
chr4 (4-239)||(36921799-36922033)
chr4 (4-240)||(48486112-48486348)
chr4 (5-240)||(11006546-11006782)
chr4 (1-237)||(51015042-51015278)
chr4 (1-240)||(9174447-9174685)
chr4 (1-152)||(22046986-22047135)
chr4 (40-241)||(18846921-18847124)
chr4 (4-239)||(619751-619986)
chr4 (6-235)||(37089680-37089910)
chr4 (7-237)||(40091722-40091952)
chr4 (1-115)||(11434873-11434987)
chr4 (40-239)||(9176836-9177035)
chr4 (8-185)||(24880299-24880476)
chr4 (8-186)||(24878836-24879014)
chr4 (40-154)||(11008932-11009046)
chr4 (53-240)||(16932175-16932361)
chr4 (9-134)||(52942756-52942881)
chr4 (4-115)||(22801166-22801276)
chr4 (5-113)||(47274647-47274755)
chr4 (1-112)||(7941240-7941351)
chr4 (53-239)||(16934529-16934714)
chr4 (53-239)||(22783132-22783317)
chr4 (4-129)||(8756554-8756679)
chr4 (53-240)||(22780767-22780953)
chr4 (122-239)||(7941133-7941251)
chr4 (122-207)||(22801262-22801347)
chr4 (161-240)||(22048498-22048576)
chr4 (122-239)||(11434769-11434887)
chr4 (4-90)||(40999251-40999337)
chr4 (149-234)||(52942917-52943002)
chr4 (5-84)||(4569902-4569980)
chr4 (9-88)||(26557535-26557614)
chr4 (5-71)||(16638646-16638712)
chr4 (1-63)||(16932090-16932152)
chr4 (4-61)||(16186141-16186199)
chr4 (7-63)||(22780688-22780744)
chr4 (7-63)||(22783053-22783109)
chr4 (5-61)||(52043735-52043791)
chr4 (1-59)||(17662539-17662598)
chr4 (1-63)||(16934444-16934506)
chr4 (7-84)||(25357585-25357663)
chr4 (6-48)||(11008876-11008918)
chr4 (6-59)||(22132705-22132759)
chr4 (5-35)||(22295151-22295181)
chr4 (6-59)||(47211052-47211106)
chr4 (6-59)||(53405100-53405154)
chr4 (247-301)||(53773990-53774044)
chr4 (7-59)||(22134937-22134990)
chr4 (7-59)||(24348187-24348240)
chr4 (5-61)||(28453658-28453715)
chr4 (1-37)||(2485174-2485210)
chr4 (1-37)||(6764835-6764871)
chr4 (1-37)||(40637070-40637106)
chr4 (1-37)||(47868397-47868433)
[»] chr1 (64 HSPs)
chr1 (7-239)||(15823286-15823518)
chr1 (1-239)||(28840418-28840656)
chr1 (1-240)||(28842232-28842471)
chr1 (1-241)||(10400131-10400371)
chr1 (1-240)||(13761576-13761815)
chr1 (1-239)||(51749778-51750017)
chr1 (1-240)||(51752103-51752343)
chr1 (1-240)||(20302197-20302437)
chr1 (1-207)||(6823655-6823862)
chr1 (6-240)||(3579926-3580160)
chr1 (4-206)||(13214854-13215056)
chr1 (4-240)||(30790700-30790936)
chr1 (4-182)||(41646717-41646895)
chr1 (5-182)||(28207373-28207550)
chr1 (4-239)||(39462258-39462494)
chr1 (4-119)||(47451508-47451623)
chr1 (41-240)||(47177077-47177274)
chr1 (41-242)||(16225884-16226083)
chr1 (41-240)||(47179427-47179625)
chr1 (1-115)||(6822879-6822993)
chr1 (4-112)||(38925784-38925892)
chr1 (23-114)||(49687405-49687496)
chr1 (7-114)||(14098279-14098385)
chr1 (122-240)||(6822774-6822893)
chr1 (101-239)||(23783238-23783376)
chr1 (161-237)||(38925920-38925996)
chr1 (53-136)||(23783362-23783444)
chr1 (148-239)||(47451405-47451496)
chr1 (140-239)||(49687301-49687400)
chr1 (5-80)||(2401492-2401568)
chr1 (4-86)||(43104051-43104134)
chr1 (5-87)||(46782944-46783029)
chr1 (122-207)||(16231373-16231458)
chr1 (1-63)||(16231517-16231579)
chr1 (194-239)||(13461347-13461392)
chr1 (5-80)||(2393578-2393654)
chr1 (172-240)||(14098443-14098511)
chr1 (1-61)||(16226085-16226145)
chr1 (40-115)||(16231444-16231518)
chr1 (1-59)||(24325575-24325634)
chr1 (1-46)||(20291390-20291435)
chr1 (194-239)||(41646681-41646726)
chr1 (5-84)||(25133878-25133957)
chr1 (5-61)||(26613547-26613603)
chr1 (1-61)||(47177276-47177336)
chr1 (1-61)||(47179627-47179687)
chr1 (4-39)||(18800875-18800910)
chr1 (5-60)||(49958963-49959018)
chr1 (6-59)||(2510636-2510690)
chr1 (6-59)||(9459731-9459785)
chr1 (6-59)||(9463558-9463612)
chr1 (1-63)||(23783467-23783529)
chr1 (7-61)||(27916415-27916469)
chr1 (6-59)||(31735833-31735887)
chr1 (4-61)||(42922151-42922209)
chr1 (6-59)||(46432036-46432090)
chr1 (6-59)||(47906183-47906237)
chr1 (9-58)||(14996872-14996921)
chr1 (134-239)||(20291280-20291386)
chr1 (5-61)||(155618-155674)
chr1 (5-37)||(12302817-12302849)
chr1 (1-33)||(15295151-15295183)
chr1 (194-234)||(28207541-28207581)
chr1 (4-59)||(48665090-48665146)
[»] chr8 (32 HSPs)
chr8 (1-239)||(12517327-12517565)
chr8 (1-240)||(27826781-27827020)
chr8 (1-240)||(27829092-27829331)
chr8 (1-235)||(14807552-14807785)
chr8 (5-240)||(15072505-15072740)
chr8 (7-240)||(15067776-15068009)
chr8 (7-235)||(28251874-28252122)
chr8 (1-239)||(4423835-4424052)
chr8 (40-240)||(44720616-44720816)
chr8 (44-240)||(18812667-18812862)
chr8 (1-115)||(3886219-3886336)
chr8 (44-239)||(18810483-18810677)
chr8 (7-113)||(2468405-2468511)
chr8 (92-240)||(43079346-43079494)
chr8 (100-240)||(43081721-43081861)
chr8 (5-88)||(17847475-17847558)
chr8 (1-63)||(18810680-18810742)
chr8 (7-82)||(31162165-31162241)
chr8 (4-86)||(15186014-15186097)
chr8 (5-62)||(31035041-31035097)
chr8 (1-38)||(43530121-43530158)
chr8 (4-39)||(6375985-6376020)
chr8 (6-84)||(14419497-14419576)
chr8 (5-71)||(23179858-23179925)
chr8 (4-58)||(13858788-13858842)
chr8 (6-59)||(15809190-15809244)
chr8 (6-59)||(24873493-24873547)
chr8 (6-59)||(28283531-28283585)
chr8 (6-59)||(32339280-32339334)
chr8 (6-63)||(43081930-43081987)
chr8 (1-37)||(22684967-22685003)
chr8 (7-63)||(43079558-43079614)
[»] chr5 (64 HSPs)
chr5 (1-239)||(16775897-16776136)
chr5 (1-239)||(38881845-38882083)
chr5 (1-235)||(4236374-4236607)
chr5 (4-240)||(21947769-21948002)
chr5 (6-147)||(21684767-21684908)
chr5 (4-239)||(20507766-20508001)
chr5 (44-240)||(34477438-34477633)
chr5 (1-115)||(2174783-2174897)
chr5 (1-115)||(25921774-25921888)
chr5 (40-240)||(31544797-31544997)
chr5 (4-111)||(39797956-39798063)
chr5 (122-240)||(659712-659829)
chr5 (53-239)||(31542442-31542628)
chr5 (4-114)||(12556227-12556337)
chr5 (4-114)||(36402632-36402741)
chr5 (53-240)||(15354880-15355066)
chr5 (53-240)||(15357156-15357342)
chr5 (53-239)||(10749505-10749690)
chr5 (4-95)||(2818640-2818731)
chr5 (53-240)||(10756959-10757145)
chr5 (103-240)||(20504316-20504453)
chr5 (7-114)||(6756359-6756466)
chr5 (5-240)||(31466283-31466497)
chr5 (53-240)||(23667108-23667294)
chr5 (53-239)||(23664834-23665019)
chr5 (53-239)||(23793568-23793753)
chr5 (104-184)||(659850-659929)
chr5 (122-240)||(34479855-34479973)
chr5 (149-239)||(18186497-18186587)
chr5 (123-240)||(12556325-12556442)
chr5 (122-239)||(25921874-25921992)
chr5 (53-146)||(31179769-31179861)
chr5 (122-239)||(2174680-2174797)
chr5 (122-239)||(2818729-2818847)
chr5 (122-239)||(39797849-39797966)
chr5 (5-60)||(29748260-29748315)
chr5 (1-63)||(31542651-31542713)
chr5 (175-242)||(21684905-21684972)
chr5 (1-146)||(4409890-4410035)
chr5 (5-61)||(2144897-2144954)
chr5 (140-237)||(6756257-6756354)
chr5 (6-63)||(34479739-34479796)
chr5 (1-59)||(3373342-3373401)
chr5 (44-115)||(34479799-34479869)
chr5 (1-146)||(39854317-39854462)
chr5 (8-62)||(42770690-42770745)
chr5 (6-59)||(10586758-10586812)
chr5 (1-63)||(10757180-10757242)
chr5 (1-63)||(15354783-15354845)
chr5 (1-63)||(15357059-15357121)
chr5 (6-59)||(15552154-15552208)
chr5 (1-63)||(23665054-23665116)
chr5 (1-63)||(23793471-23793533)
chr5 (6-59)||(25803935-25803989)
chr5 (6-59)||(27910364-27910418)
chr5 (6-59)||(27912449-27912503)
chr5 (6-48)||(34477378-34477420)
chr5 (1-63)||(38960343-38960405)
chr5 (7-59)||(18468926-18468979)
chr5 (7-92)||(25837906-25837991)
chr5 (199-239)||(661246-661286)
chr5 (1-37)||(6745003-6745039)
chr5 (1-37)||(6747246-6747282)
chr5 (1-37)||(10529400-10529436)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-240)||(2628-2867)
[»] chr6 (45 HSPs)
chr6 (4-239)||(15530426-15530661)
chr6 (1-240)||(19227709-19227949)
chr6 (4-239)||(8995255-8995489)
chr6 (4-239)||(9019702-9019936)
chr6 (1-239)||(14507476-14507716)
chr6 (1-240)||(11983330-11983567)
chr6 (44-182)||(4816612-4816749)
chr6 (4-156)||(30729132-30729284)
chr6 (53-240)||(33308684-33308870)
chr6 (53-240)||(33310953-33311139)
chr6 (5-146)||(15541445-15541586)
chr6 (7-114)||(32279897-32280004)
chr6 (53-239)||(29755094-29755279)
chr6 (5-156)||(15532986-15533137)
chr6 (4-114)||(1072181-1072291)
chr6 (53-239)||(26068697-26068882)
chr6 (53-240)||(26066426-26066612)
chr6 (122-239)||(32279794-32279910)
chr6 (35-138)||(24192630-24192733)
chr6 (35-138)||(24191533-24191636)
chr6 (149-239)||(1072305-1072395)
chr6 (7-61)||(12186376-12186431)
chr6 (6-63)||(4816551-4816608)
chr6 (6-63)||(20915664-20915721)
chr6 (8-62)||(16455732-16455786)
chr6 (1-63)||(26068600-26068662)
chr6 (1-61)||(26066329-26066389)
chr6 (1-59)||(12195816-12195875)
chr6 (19-86)||(12911770-12911837)
chr6 (6-84)||(15346320-15346399)
chr6 (99-146)||(26084818-26084865)
chr6 (19-61)||(12937517-12937559)
chr6 (194-240)||(15533175-15533221)
chr6 (1-63)||(29754997-29755059)
chr6 (6-59)||(30034913-30034967)
chr6 (7-59)||(2629197-2629250)
chr6 (5-58)||(15366992-15367045)
chr6 (194-239)||(15541634-15541679)
chr6 (6-35)||(26945127-26945156)
chr6 (2-63)||(33308905-33308966)
chr6 (2-63)||(33311174-33311235)
chr6 (7-39)||(3028157-3028189)
chr6 (9-61)||(19696394-19696446)
chr6 (1-37)||(28241622-28241658)
chr6 (5-86)||(33215630-33215712)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-240)||(69596-69834)
scaffold0025 (7-240)||(73334-73545)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-238)||(14768-15006)
[»] scaffold0068 (2 HSPs)
scaffold0068 (6-147)||(29002-29143)
scaffold0068 (175-242)||(28938-29005)
[»] scaffold0339 (1 HSPs)
scaffold0339 (5-113)||(3872-3980)
[»] scaffold0472 (1 HSPs)
scaffold0472 (40-239)||(5927-6125)
[»] scaffold0140 (4 HSPs)
scaffold0140 (53-240)||(21914-22100)
scaffold0140 (53-240)||(24189-24375)
scaffold0140 (1-63)||(22135-22197)
scaffold0140 (1-63)||(24410-24472)
[»] scaffold0127 (1 HSPs)
scaffold0127 (53-239)||(12869-13054)
[»] scaffold0224 (1 HSPs)
scaffold0224 (4-61)||(16122-16180)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-37)||(1132-1168)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-37)||(41784-41820)


Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 1321399 - 1321161
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1321399 ttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 1321300  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  1321299 ccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcctcaaacttgaaacctctaatcgtgccacgttgcccagcaatcgtgcc 1321200  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1321199 acgattcctgcagatcttgattttaagttaactctcaca 1321161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26720506 - 26720267
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26720506 ttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactaaaaaatatgtttctgtttttcgctgccagcaca 26720407  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||    
T  26720406 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcctgccacgttgctcagccatcgtgcc 26720307  T
Q  201 acgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  26720306 acgattcctgcagatcctgattttaagttaactctcacaa 26720267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 5522914 - 5523153
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5522914 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgca 5523013  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||  ||||||| |||||||||||| ||||||||||| || ||||    
T  5523014 ccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttgcctcaaaactgaaaccaccaatcgtgccatgttgcccagcaatcttgcc 5523113  T
Q  201 acgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  5523114 acgattcctccagatcttgattttaagttaactctcacaa 5523153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 5191604 - 5191374
Alignment:
Q  8 gatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgt 107  Q
    |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5191604 gatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgt 5191505  T
Q  108 gccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattc 207  Q
    ||||||||| || ||||||||||||||||||||||||| | ||||||||||  |||||||||||||||||||||| ||||||||| |||||||||||||     
T  5191504 gccacgatgagatcccatcgtgccacgatttttccagtaccttgcctcaaaactgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgatt- 5191406  T
Q  208 ctgcagatct-tgattttaagttaactctcac 238  Q
    |||||||  | |||||||||||||||||||||    
T  5191405 ctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 10956329 - 10956564
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||  || ||||||||||||||||||||||||||  ||||||| |||| |||| |||||||||||| |||||    
T  10956329 ctctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaaaatacgtttatgttattcgctgccagcgcacca 10956428  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||| | || |||||  | ||||||||    
T  10956429 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgccatgatgtccagccat-gtgccacg 10956527  T
Q  204 attcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10956528 attcctgcagatcctgattttaagttaactctcacaa 10956564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 18099473 - 18099708
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| || ||||| |||||| |||||    
T  18099473 ctctgatacaaggtctatatt-atagtaaaagtctcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctattgttcgccgccagcgcacca 18099571  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||  ||||||||||    
T  18099572 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttgcctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacg 18099671  T
Q  204 attcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |||  ||||| | | |||||||||||||||||||||||    
T  18099672 att-ttgcagaaacctgattttaagttaactctcacaa 18099708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22114604 - 22114843
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||| | ||    
T  22114604 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccatcgca 22114703  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||  |||||||||| |||||||||||||||||| |  ||||||    
T  22114704 ccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgcccaaccatcgtgc 22114802  T
Q  200 cacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||||||| || ||| | | |||||||||||||||||||||||    
T  22114803 cacgatt-ctacagaaacctgattttaagttaactctcacaa 22114843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 32264345 - 32264580
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  32264345 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcacca 32264444  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccac 202  Q
    |||||||||| ||| | |||||||||||||||    |||||||  ||||||| |||  |||||||||||||||||||||||| ||||||  |||||||||    
T  32264445 tcgtgccacgttgcaagcccatcgtgccacgaaaaatccagtgacttgcctcaaaaactgaaacctccaatcgtgccacgtt-cccagccatcgtgccac 32264543  T
Q  203 gattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||| ||||| | | ||||||||||||||||||||||    
T  32264544 gatttctgcaaaacctgattttaagttaactctcaca 32264580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 239
Target Start/End: Complemental strand, 24177231 - 24176999
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||| ||||||||||  ||| | ||||||||    
T  24177231 tgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgcacttaaaaatacgtttatgtttttcgcctccaacgcaccatcg 24177132  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
    ||||||  ||||| |||||||||||||  |||||||||||  |||| ||| |  ||||||  |||||||||||||||||||| |||  ||||||||||||    
T  24177131 tgccacattgcgatcccatcgtgccacattttttccagtgacttgcttcagaactgaaacaaccaatcgtgccacgttgccctgcaaacgtgccacgatt 24177032  T
Q  207 cctgcagatcttgattttaagttaactctcaca 239  Q
     || |||| ||||||||||||||||||||||||    
T  24177031 tctccagaacttgattttaagttaactctcaca 24176999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 11163108 - 11162891
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||| ||    
T  11163108 ttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgca 11163009  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    |||                     ||||||||| ||||||||||||| ||||||||||   ||||||||||| |||||||||||||||||||| ||||||    
T  11163008 cca---------------------tcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctcca-tcgtgccacgttgcccagcaatcgtgc 11162931  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11162930 cacgattcctgcagatcttgattttaagttaactctcaca 11162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 10958625 - 10958767
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||  || ||||||||||||||||||||||||||  ||||||| ||||||||| || ||||||||| |||||    
T  10958625 ctctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaaaatacgtttctgttattggctgccagcgcacca 10958724  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10958725 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 10958767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 11170362 - 11170144
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| ||    
T  11170362 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgccgccagcgca 11170263  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    | |||| |||||                     |||||||||||||| ||||||| |||   ||||||||| |||||||||||||||||||||  |||||    
T  11170262 caatcgagccac---------------------gatttttccagtgccttgcctcaaaaaccgaaacctcc-atcgtgccacgttgcccagcaaccgtgc 11170185  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11170184 cacgattcctgcagatcttgattttaagttaactctcacaa 11170144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10084692 - 10084807
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10084692 ttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgca 10084791  T
Q  101 ccatcgtgccacgatg 116  Q
    ||||||||||||||||    
T  10084792 ccatcgtgccacgatg 10084807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10191612 - 10191727
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  10191612 ttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaatatgtttctgtttttcgctgccagcgca 10191711  T
Q  101 ccatcgtgccacgatg 116  Q
    ||||||||||||||||    
T  10191712 ccatcgtgccacgatg 10191727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 18097206 - 18097423
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||| ||||| ||||               
T  18097206 tgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctgcacccaaaaatacgtttctgttattcgccgcca----------- 18097294  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
         | |||||||||||||||||||||||||||||  ||| ||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||    
T  18097295 -----ctatgcgaccccatcgtgccacgatttttcctatgccttgcctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatt 18097389  T
Q  207 cctgcag-atcttgattttaagttaactctcacaa 240  Q
      ||||| | | |||||||||||||||||||||||    
T  18097390 -ttgcagaaacctgattttaagttaactctcacaa 18097423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 3859486 - 3859350
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||| | || ||||| |||||| ||    
T  3859486 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcacccaaaaatacgtttatattattcgccgccagcgca 3859387  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatt 137  Q
    |||||||||||||||| ||||||||||||||||||||    
T  3859386 ccatcgtgccacgatgtgaccccatcgtgccacgatt 3859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 45882891 - 45882752
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||| |||| || |||| ||||||||    
T  45882891 tgatacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatctgcacccaaaaataggtttctgttattcgttgtcagcgcaccatcg 45882792  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    ||||||| ||| | ||||||||| ||||||||||||||||    
T  45882791 tgccacgttgcaatcccatcgtggcacgatttttccagtg 45882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 18162616 - 18162508
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||    
T  18162616 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcaccatcg 18162517  T
Q  107 tgccacgat 115  Q
    || ||||||    
T  18162516 tggcacgat 18162508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 48361975 - 48362082
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||| | |||||||||||| |||||||     
T  48361975 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatacgtttctgctattcgctgccagcgcaccatca 48362074  T
Q  107 tgccacga 114  Q
    ||||||||    
T  48362075 tgccacga 48362082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 38210252 - 38210066
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| |||     
T  38210252 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcactatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 38210154  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||||||||||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||    
T  38210153 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 38210066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 53896556 - 53896754
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || ||||||||||| | |||||||| |||| | |||||  | || ||  |||||||||||||||||| ||||||||||||||||||||||    
T  53896556 gcttaaaatctgtaacaaatctgctcccaaaaatacgttt-tatttttatccgcaagagcaccatcgtgccacgatgagaccccatcgtgccacgatttt 53896654  T
Q  140 tccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctca 237  Q
    |||||| | ||| ||  |||  | |||||||| ||||||||||||||||||||| ||||||||||||| |||||| | | ||||||||||||||||||||    
T  53896655 tccagtaccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcaatcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 53896752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 46966938 - 46967062
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| | |||||||||||||||||||||||   |||||  ||||    
T  46966938 tctgatacaatgtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcattgaaaaatatgtttctgtttttcgccttcagcattccat 46967037  T
Q  105 cgtgccacgatgcgaccccatcgtg 129  Q
    ||| ||||| | |||| ||||||||    
T  46967038 cgtaccacgttacgactccatcgtg 46967062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 50493861 - 50493676
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| |||     
T  50493861 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacgatgagactccatcgtgccacgatttttccagtgccttgc 50493763  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| ||||||||||||||||||||  ||||||||||||| |||||| | | ||||||||||||||||||||||    
T  50493762 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 50493676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 24979662 - 24979552
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||  |||||||||||| |||| |||||| |||||  ||||    
T  24979662 ctctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaacaaatctgcaccaaaaaatatgtttatgttattcgctaccagcgtacca 24979563  T
Q  104 tcgtgccacga 114  Q
    |||||||||||    
T  24979562 tcgtgccacga 24979552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35777379 - 35777266
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||| |||||||| || |||||||||||||||||| | ||||||||| || ||||||||||||| ||||||||||||| ||||||| ||||||||| ||    
T  35777379 ttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcacccaaaaatatgtttatgttttt-gctgccagcgca 35777281  T
Q  101 ccatcgtgccacgat 115  Q
    |||||||||||||||    
T  35777280 ccatcgtgccacgat 35777266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 25388795 - 25388683
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || ||||||||||| | ||||||||||||| | |||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  25388795 gcttaaaatctgtaacaaatctgctcccaaaaatatgttt-tatttttatctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttt 25388697  T
Q  140 tccagtgctttgcc 153  Q
    |||||||| |||||    
T  25388696 tccagtgccttgcc 25388683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 32219046 - 32218941
Alignment:
Q  8 gatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgt 107  Q
    |||||||||| |||||||||| | |||||||  ||||||||||||||||||||||||| |||||||| |||||| || |||||||||||| |||||||||    
T  32219046 gatacaaggtctatatttatactgaaagtattacttaaaatttggaacaaatctgcacccaaaaatacgtttctcttattcgctgccagcgcaccatcgt 32218947  T
Q  108 gccacg 113  Q
    ||||||    
T  32218946 gccacg 32218941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 206
Target Start/End: Complemental strand, 5899657 - 5899492
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || |||||||||| || |||||||| |||| | |||||  |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  5899657 gcttaaaatctgtaacaaatctgtacccaaaaatacgttt-tatttttatctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttt 5899559  T
Q  140 tccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
    |||||||| ||||||  |||  | |||| ||| |||||||||||||||||  || |||||||| ||||    
T  5899558 tccagtgccttgcctaaaaaactaaaacatcc-atcgtgccacgttgcccttcaatcgtgccatgatt 5899492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 6063808 - 6064007
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || ||||||||||||| ||||||||||||| | |||||  | |||||  |||||||||||||||||||||||||||||||||||||||||    
T  6063808 gcttaaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagtccaccatcgtgccacgatgcgaccccatcgtgccacgatttt 6063906  T
Q  140 tccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgca-gatcttgattttaagttaactctca 237  Q
    | |||||| ||| ||  |||  | |||||||| || |||||||||||||  ||  ||||||||||||| |||||  | | |||||||||||||| |||||    
T  6063907 ttcagtgccttgcccaaaaaactaaaacctcc-attgtgccacgttgccttgccatcgtgccacgatt-ctgcataaacctgattttaagttaattctca 6064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 15780815 - 15780747
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa 72  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15780815 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa 15780747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 32218926 - 32218835
Alignment:
Q  149 ttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||||||| ||||||||||||||||||||||||||||||    ||||||||||||| ||||||| | |||||||||||||||||||||||    
T  32218926 ttgcctcaaagttgaaacctccaatcgtgccacgttgcccaatcatcgtgccacgatttctgcagaacctgattttaagttaactctcacaa 32218835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 5886182 - 5886069
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || ||||||| ||||| |||||||| |||| | |||||  |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5886182 gcttaaaatctgtaacaaatttgcacccaaaaatacgttt-tatttttatctgccagcgcaccatcgtaccacgatgcgaccccatcgtgccacgatttt 5886084  T
Q  140 tccagtgctttgcct 154  Q
    |||||| | ||||||    
T  5886083 tccagtaccttgcct 5886069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 10192401 - 10192498
Alignment:
Q  110 cacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcc 208  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||  ||  |||||||||||||||    
T  10192401 cacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgccacgttgccttgcgatcgtgccacgattcc 10192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 12268268 - 12268348
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtt 84  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||||    
T  12268268 ctctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactgaaaaatacgtctctgtt 12268348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 38889936 - 38889861
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgat 115  Q
    ||||||||| || ||||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  38889936 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgat 38889861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 208
Target Start/End: Original strand, 10085481 - 10085578
Alignment:
Q  110 cacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcc 208  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||  ||  || ||||||||||||    
T  10085481 cacgatgtgatcccatcgtgccacgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgccacgttgccttgcgatcatgccacgattcc 10085578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 48362096 - 48362186
Alignment:
Q  149 ttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||  |||||| |||||||||||||||||||||| |  ||||||||||||| || |||| | ||||||||||||||||||||||    
T  48362096 ttgcctcaaaactgaaacttccaatcgtgccacgttgcccaaccatcgtgccacgatttctacagaacctgattttaagttaactctcaca 48362186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 6719471 - 6719546
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgat 115  Q
    ||||||||| || | ||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  6719471 gcttaaaatctgtatcaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgat 6719546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 13893345 - 13893267
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttt 86  Q
    |||||||| || ||||||||||||||||||| | ||||||||||||||||||||||||||  |||||| |||||||||||    
T  13893345 tgatacaatgtctatatttatagtaaaagtaacccttaaaatttggaacaaatctgcact-gaaaatacgtttctgtttt 13893267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 35777280 - 35777163
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatct-tg 219  Q
    |||||||||||||||||||||||||| |||||  |||   | ||||||||| ||||||||||||||||||| |||||||||||||| |||||||  | |     
T  35777280 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagctgtcgtgccacgatt-ctgcagaaatcta 35777183  T
Q  220 attttaagttaactctcaca 239  Q
    ||||||||||||||||||||    
T  35777182 attttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 38889989 - 38889935
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  38889989 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 38889935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6066096 - 6066210
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| || ||||||||||| | ||||||||  ||| | |||||  | |||||| ||    
T  6066096 ttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaatctgtaacaaatctgctcccaaaaatacattt-tatttttatccgccagcgca 6066194  T
Q  101 ccatcgtgccacgatg 116  Q
    ||||||||||||||||    
T  6066195 ccatcgtgccacgatg 6066210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 6719532 - 6719618
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaac--ctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
    |||||||||||||||||||||||||| |||||| |||  ||||||  |||||||||||||||| |||||  || |||||||||||||    
T  6719532 ccatcgtgccacgatttttccagtgcattgcctaaaaactgaaacctctccaatcgtgccacgatgcccttcaatcgtgccacgatt 6719618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 16996760 - 16996677
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttc 88  Q
    |||||||||||||||||||||||| |||||  ||| || |||||||||||||||||    | ||||||||||||||||||||||    
T  16996760 tctgatacaaggtttatatttatattaaaaccatccctaaaaatttggaacaaatccaggcccaaaaatatgtttctgtttttc 16996677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6719410 - 6719472
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||| || |||||||||||    
T  6719410 ttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 6719472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 5886242 - 5886181
Alignment:
Q  2 tgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||| || |||||||||||    
T  5886242 tgctctgataaaaggtctatatttatagtaaaagtttcgcttaaaatctgtaacaaatctgc 5886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 5899717 - 5899656
Alignment:
Q  2 tgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||| || |||||||||||    
T  5899717 tgctctgataaaaggtctatatttatagtaaaagtctcgcttaaaatctgtaacaaatctgc 5899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 26762919 - 26762863
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||||||||||||||||||||||||||||| ||| || |||| |||||||||||||    
T  26762919 tctgatacaaggtttatatttatagtaaaagcatccctaaaaaattggaacaaatct 26762863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6063747 - 6063809
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||||||| || |||||||||||    
T  6063747 ttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 6063809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 25388851 - 25388794
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||||||||||| |||||||||||||||||| | ||||||||| || |||||||||||    
T  25388851 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 25388794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 7606886 - 7606964
Alignment:
Q  161 tgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||||||||||| |||||||||||||||||||  ||||| ||||||| |||||| | | |||||||||||||||||||||||    
T  7606886 tgaaacctcca-tcgtgccacgttgcccagccatcgtgtcacgatt-ctgcagaaacctgattttaagttaactctcacaa 7606964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 11007978 - 11008011
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtat 38  Q
    ||||||||||||||||||||||||||||||||||    
T  11007978 tctgatacaaggtttatatttatagtaaaagtat 11008011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 23633415 - 23633334
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatctgcactcaaaaatatgtttctgtt 84  Q
    ||||||||||| || ||||||||||||||||||||| || | ||| |||||||||||||   ||| |||||| |||||||||    
T  23633415 ctctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatctaggctcgaaaatacgtttctgtt 23633334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 38889875 - 38889757
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag--atctt 218  Q
    |||||||||||||||||||||| ||| ||||||  |||  |||||||||| ||||||||||||||||  ||  |||| |||||||| ||||||  | | |    
T  38889875 ccatcgtgccacgatttttccaatgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtaccacgatt-ctgcagaaaacct 38889778  T
Q  219 gattttaagttaactctcaca 239  Q
     ||||||||||||||||||||    
T  38889777 aattttaagttaactctcaca 38889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 7768530 - 7768474
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    |||||||||||| |||||||||||||||||  ||| || |||| |||||||||||||    
T  7768530 tctgatacaaggcttatatttatagtaaaaacatccctaaaaaattggaacaaatct 7768474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 38210321 - 38210265
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 62  Q
    |||||||||||  |||||||||||||||||| | ||||||||| || ||||||||||    
T  38210321 ctgatacaaggcctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctg 38210265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4308580 - 4308725
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagt-atcgctt-aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagca 98  Q
    ||||||||||||||||| |||||||||||| ||||| ||| ||| ||||  || ||||||||| || | ||||||| |||| | |||||  || | | |     
T  4308580 ttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcaat-aaaaatacgttt-tatttttatcttcaatcg 4308677  T
Q  99 caccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    |||||||||| |||||| ||| || |||||| ||||||||||||||||    
T  4308678 caccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 4308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 27420598 - 27420543
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatc 60  Q
    |||||||| |||||| ||||||| ||||||||||| || |||| ||||||||||||    
T  27420598 tctgataccaggtttgtatttattgtaaaagtatccctaaaaaattggaacaaatc 27420543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 47883178 - 47883245
Alignment:
Q  5 tctgatacaaggtttatatttatagt-aaaagtatcgcttaaaatttggaacaaatctgcactcaaaa 71  Q
    |||||||||||| |||||||||||||  |||||| | |||||||| |||||||||||| |||| ||||    
T  47883178 tctgatacaaggcttatatttatagtggaaagtaacccttaaaatatggaacaaatcttcactgaaaa 47883245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 51727305 - 51727450
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagt-atcgctt-aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagca 98  Q
    ||||||||||||||||| |||||||||||| ||||| ||| ||| ||||  || ||||||||| || | ||||||| |||| | |||||  || | | ||    
T  51727305 ttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcaat-aaaaatacgttt-tatttttatcttcaatca 51727402  T
Q  99 caccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    |||||||||| |||||| ||| |  |||||| ||||||||||||||||    
T  51727403 caccatcgtggcacgattcgatcaaatcgtggcacgatttttccagtg 51727450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 53597196 - 53597161
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatc 39  Q
    |||||||||||||| |||||||||||||||||||||    
T  53597196 ctctgatacaaggtctatatttatagtaaaagtatc 53597161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 455856 - 455802
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  455856 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 455802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 458233 - 458179
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  458233 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 458179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 746704 - 746650
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  746704 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 746650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 4104203 - 4104257
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  4104203 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 4104257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 10621846 - 10621900
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  10621846 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 10621900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50493957 - 50493895
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| |||||||||||| |||||   ||||||||| || |||||||||||    
T  50493957 ttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 50493895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 53896495 - 53896557
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| |||||||||||| |||||   ||||||||| || |||||||||||    
T  53896495 ttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 53896557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10949555 - 10949612
Alignment:
Q  5 tctgatacaaggtttatatttatagt-aaaagtatcgcttaaaatttggaacaaatct 61  Q
    |||||||||||| |||||||||||||  |||||| | |||||||| ||||||||||||    
T  10949555 tctgatacaaggcttatatttatagtggaaagtaacccttaaaatatggaacaaatct 10949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 18162450 - 18162405
Alignment:
Q  194 tcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||| |||||||  |||||||| ||||||||||||||||||||||    
T  18162450 tcgtggcacgatttatgcagatcctgattttaagttaactctcaca 18162405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 42990234 - 42990181
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  42990234 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 42990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 45882704 - 45882659
Alignment:
Q  194 tcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||| |||||||  |||||||| ||||||||||||||||||||||    
T  45882704 tcgtggcacgatttttgcagatcctgattttaagttaactctcaca 45882659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 25533387 - 25533355
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtat 38  Q
    |||||||||||| ||||||||||||||||||||    
T  25533387 ctgatacaaggtctatatttatagtaaaagtat 25533355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25690655 - 25690691
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  25690655 ttgctctgatacaaggtctatatttatagtgaaagta 25690691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27101484 - 27101520
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  27101484 ttgctctgatacaaggtctatatttatagtgaaagta 27101520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27101559 - 27101595
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  27101559 ttgctctgatacaaggtctatatttatagtgaaagta 27101595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 42064469 - 42064231
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  42064469 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactaaaaaatatgtttctgtttttcgctgccagcgca 42064370  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  42064369 ccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccagtcgtaccacgttgcccagcaatcgtgcc 42064270  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42064269 acgattcctgcagatcttgattttaagttaactctcaca 42064231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 21521000 - 21521235
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |||| |||||||||||| ||||||    
T  21521000 tctgatacaaggtttatatttatagtaaaagtatcgcttaaattttggaacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccat 21521099  T
Q  105 cgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacga 204  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||  |||| |||||  |||||||||||||||||||||||||||||||  |||||||||||    
T  21521100 cgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttgcttcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacga 21521199  T
Q  205 ttcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||| ||| | |||||||||||||||||||||||    
T  21521200 ttcctgtagaacctgattttaagttaactctcacaa 21521235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 27104750 - 27104514
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  27104750 ctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaaaatatgtttatgtttttccctgccagcgcacca 27104651  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccac 202  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||  |||||||||| |||||||||||||||||  || |||||||||    
T  27104650 tcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgcccttcaatcgtgccac 27104552  T
Q  203 gattcctgcagatct-tgattttaagttaactctcacaa 240  Q
    |||| |||||||  | |||||||||||||||||| ||||    
T  27104551 gatt-ctgcagaaatctgattttaagttaactcttacaa 27104514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 6259124 - 6259351
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtg 108  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||| | |||||| ||||||||||    
T  6259124 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaagtctgcacccaaaaatatgtttctgttattcaccgccagcgcaccatcgtg 6259223  T
Q  109 ccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcc 208  Q
     |||| ||||| ||||||||||||||||||||||||||  || |||||||  |||||| |||||| |||||||||||| ||||  ||||||||||||| |    
T  6259224 tcacgttgcgatcccatcgtgccacgatttttccagtgactttcctcaaaactgaaacatccaatagtgccacgttgcacagccatcgtgccacgatttc 6259323  T
Q  209 tgcagatcttgattttaagttaactctc 236  Q
    |||||| | |||||||||||||||||||    
T  6259324 tgcagaacctgattttaagttaactctc 6259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 24162513 - 24162753
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||  | ||||| |||||| ||    
T  24162513 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcacccaaaaatacgtttctaatattcgcagccagcgca 24162612  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtg 198  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||  |||||||||| |||||||||||||||||| |  | |||    
T  24162613 caatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccaaccattgtg 24162711  T
Q  199 ccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |||||||| |||||| | |||||||||||||||||||||||||    
T  24162712 ccacgatt-ctgcagaaacttgattttaagttaactctcacaa 24162753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 13910345 - 13910494
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13910345 ttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgca 13910444  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcttt 150  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13910445 ccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgcttt 13910494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 22407713 - 22407948
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||| | |||||    
T  22407713 ctctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatctgcacccaaaaatacgtttctgttattcgctgccaacgcacca 22407812  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||| || || ||||||||||||| |||||| || ||  ||||||||||  |||||| ||||||||||||| ||| |||  || ||||||||||    
T  22407813 tcgtgccacgttgtgatcccatcgtgccacaattttttcactgacttgcctcaaaactgaaacatccaatcgtgccatgttacccttcaatcgtgccacg 22407912  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||| | | ||||||| ||||||||||||    
T  22407913 attcctgcagaacctaattttaaattaactctcaca 22407948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19502312 - 19502551
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||| | || ||||||||||||| ||||||||||  |||||||||||||||||| ||||  |||||| ||    
T  19502312 ttgctctgatacaaggtctatatttatagtaaaattttcccttaaaatttggatcaaatctgcaaccaaaaatatgtttctgttattcgtcgccagcgca 19502411  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||  |||||||||| ||||||||||||||||  ||  ||||||    
T  19502412 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgc 19502510  T
Q  200 cacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||||||| |||||| | | |||||||||||||||| ||||||    
T  19502511 cacgatt-ctgcagaaacctgattttaagttaactatcacaa 19502551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 19504646 - 19504884
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||  |||||| |||||||||| ||||  |||||| ||    
T  19504646 ttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacctaaaaatgtgtttctgttattcgtcgccagcgca 19504745  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||| || |||||||| ||||||||||||||||  ||  ||||||    
T  19504746 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattaaaacctcc-atcgtgccacgttgccttgccatcgtgc 19504844  T
Q  200 cacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    || |||| |||| | | | |||||||||||||||| |||||    
T  19504845 catgatt-ctgctgaaacctgattttaagttaactttcaca 19504884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 40032362 - 40032587
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||    
T  40032362 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcacca 40032461  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    ||||           | |||||||||||||||    |||||||  ||| ||||||  |||||||||||||||||||||||||||||||  ||||||||||    
T  40032462 tcgt-----------atcccatcgtgccacgaaaaatccagtgacttgtctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacg 40032550  T
Q  204 attcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||| ||||||| | |||||||||||||||||||||||    
T  40032551 atttctgcagaacctgattttaagttaactctcacaa 40032587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 6264450 - 6264560
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |   ||||||    
T  6264450 tctgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgccgctaatgcaccat 6264549  T
Q  105 cgtgccacgat 115  Q
    |||||||||||    
T  6264550 cgtgccacgat 6264560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 18800608 - 18800713
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatc 105  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  | ||| |||||||    
T  18800608 ctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatctgcacttaaaaatatgtttctg-ttttcgcctctagcgcaccatc 18800706  T
Q  106 gtgccac 112  Q
    |||||||    
T  18800707 gtgccac 18800713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 36559173 - 36559359
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  36559173 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 36559271  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  36559272 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 36559359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 22287645 - 22287764
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtg 108  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||  ||| |||| |||||||||||| |||||| |||    
T  22287645 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaacatacatttttgttattcgctgccagcgcaccatggtg 22287744  T
Q  109 ccacgatgcgaccccatcgt 128  Q
    ||||| | ||| ||||||||    
T  22287745 ccacgttacgatcccatcgt 22287764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 43623872 - 43623982
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| | |||||| |||| |||| || ||||||||| |||||    
T  43623872 ctctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatctgcac-ccaaaatacgtttatgttatttgctgccagcgcacca 43623970  T
Q  104 tcgtgccacgat 115  Q
    ||||||||||||    
T  43623971 tcgtgccacgat 43623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 43623968 - 43624086
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttga 220  Q
    ||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||| ||||||||||  |||||||| |||| |||||| | | |||    
T  43623968 ccatcgtgccacgattttttcagtgccttgcctcaaaactgaaacctccaatcgtgccatgttgcccagccatcgtgccatgatt-ctgcagaaacctga 43624066  T
Q  221 ttttaagttaactctcacaa 240  Q
    ||||||||||||| ||||||    
T  43624067 ttttaagttaactttcacaa 43624086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 28462591 - 28462671
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttt 86  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||| ||||    
T  28462591 tctgatacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcact-gaaaatatgtttctatttt 28462671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 6264546 - 6264658
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgat 221  Q
    |||||||||||||||||||||||||  ||||||||||  |||||| ||||||| |||||||||||||| |  |||||| || ||| ||||||| | ||||    
T  6264546 ccatcgtgccacgatttttccagtgacttgcctcaaaactgaaacatccaatcatgccacgttgcccaaccatcgtgcaacaatttctgcagaacctgat 6264645  T
Q  222 tttaagttaactc 234  Q
    |||||||||||||    
T  6264646 tttaagttaactc 6264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 45332490 - 45332675
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| ||||||||||| |||||||||||||||| | |||     
T  45332490 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgttccacgatttttccagttccttgc 45332588  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| |||||||||||||| |||||| | | ||||||||||||||||||||||    
T  45332589 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 18800702 - 18800820
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgat 221  Q
    |||||||||||| ||||||||||||  |||| ||| |  |||||| |||||||||| ||||||||||| ||  |||||||||||| || |||| | ||||    
T  18800702 ccatcgtgccacaatttttccagtgacttgcttcataactgaaacatccaatcgtgtcacgttgcccaacaaacgtgccacgatttctccagaacatgat 18800801  T
Q  222 tttaagttaactctcacaa 240  Q
    |||||||||||||||||||    
T  18800802 tttaagttaactctcacaa 18800820  T

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Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 35107248 - 35107110
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    |||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| | || |||| |||||   |||| |||||  |    
T  35107248 tgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgcattgaaaaatacgattatgttattcgccttcagcgcaccaatg 35107149  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagt 145  Q
    || |||| | ||| ||||||||| |||| ||||||||||    
T  35107148 tgacacgttacgatcccatcgtgacacgttttttccagt 35107110  T

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Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 36561539 - 36561677
Alignment:
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| ||||||||  |  ||||||| |||||||    
T  36561539 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgtgaagcccagccgtcgtgc 36561637  T
Q  200 cacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    |||||||  ||||| | | ||||||||||||||||||||||    
T  36561638 cacgatt-gtgcagaaacctgattttaagttaactctcaca 36561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 36561450 - 36561532
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgat 136  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||    
T  36561450 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 36561532  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 33603870 - 33603791
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttc 88  Q
    ||||||||||||||||||||||||||||||| || | || ||||||||||||| ||| |  ||||||||||||||||||||    
T  33603870 atacaaggtttatatttatagtaaaagtatccctaacaaattggaacaaatct-cacgctgaaaatatgtttctgtttttc 33603791  T

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Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 35028529 - 35028473
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    |||||||||| || ||||||||||||||||||||| || |||| |||||||||||||    
T  35028529 tctgatacaatgtctatatttatagtaaaagtatccctaaaaaattggaacaaatct 35028473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 37171049 - 37171183
Alignment:
Q  5 tctgatacaaggtttatatttatagt-aaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    ||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||| ||||  |||||| |||| |||| ||  ||  |||| |||||    
T  37171049 tctgatacaaggtttatatttatagtggaaagtaacccttaaaatatggaacaaatcttcact-gaaaatacgtttttgttatttcct-tcagcgcacca 37171146  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgattttt 140  Q
    |||||||||| | |||  |||||||| ||||| ||||    
T  37171147 tcgtgccacgttacgattccatcgtggcacgaatttt 37171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 36561518 - 36561553
Alignment:
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgat 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  36561518 ccatcgtgccacgatgcgaccccatcgtgccacgat 36561553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 40699261 - 40699180
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatctgcactcaaaaatatgtttctgtt 84  Q
    ||||||| |||||| ||||||||||||||||||||| || | ||| |||||||||||||   | |||||||||| |||||||    
T  40699261 ctctgatgcaaggtctatatttatagtaaaagtatccctcagaaaattggaacaaatctcagcccaaaaatatgattctgtt 40699180  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 45156999 - 45156946
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatc 60  Q
    ||||| ||||| ||||||||||||||||| ||| || |||||||||||||||||    
T  45156999 tgatataaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatc 45156946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 12342714 - 12342786
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatg 76  Q
    ||||||||||| || |||||||||||||||||||||    |||| ||||||||||||||  | ||||||||||    
T  12342714 ctctgatacaatgtgtatatttatagtaaaagtatcctaaaaaaattggaacaaatctgaccccaaaaatatg 12342786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 17897547 - 17897581
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatc 39  Q
    ||||||||||||| |||||||||||||||||||||    
T  17897547 tctgatacaaggtctatatttatagtaaaagtatc 17897581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 23452547 - 23452601
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  23452547 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 23452601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 35215902 - 35215956
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  35215902 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 35215956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36559076 - 36559138
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  36559076 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 36559138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36561353 - 36561415
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  36561353 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 36561415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 20589611 - 20589555
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaag-tatcgcttaaaatttggaacaaatc 60  Q
    ||||||||||||| |||||||||||||||||  ||| || |||| ||||||||||||    
T  20589611 tctgatacaaggtctatatttatagtaaaagcaatccctcaaaaattggaacaaatc 20589555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 45280286 - 45280322
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  45280286 ttgctctgatacaaggtatatatttatagtgaaagta 45280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 35617 - 35378
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | || ||||||||| ||    
T  35617 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgctatttgctgccagcgca 35518  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  35517 cgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagcaatcgtgcc 35418  T
Q  201 acgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35417 acgattcctgcagatcttgattttaagttaactctcacaa 35378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 44552 - 44313
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||| || ||||||||| ||    
T  44552 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggtacaaatctgcacccaaaaatatgtttatgttatttgctgccagcgca 44453  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||||||    
T  44452 ccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttgcgtcaaacttgaaacctccaatcgtgccacattgcccagaaatcgtgcc 44353  T
Q  201 acgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44352 acgattcctgcagatcttgattttaagttaactctcacaa 44313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 25542519 - 25542281
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-tatgtttctgtttttcgctgccagcac 99  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| |    
T  25542519 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctacactcaaaaaatatgtttctgtttttcgctgccagcgc 25542420  T
Q  100 accatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||  |||||||||||||||||||||||||||||||| ||||||    
T  25542419 accatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgc 25542320  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  25542319 cac-attcctgcagatcttgattttaagttaactctcaca 25542281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 3878563 - 3878322
Alignment:
Q  1 ttgctctgatacaaggtttatatt----tatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccag 96  Q
    ||||||||||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  3878563 ttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgctgccag 3878465  T
Q  97 cacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcg 196  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  3878464 cgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagccatcg 3878365  T
Q  197 tgccacgattcctgcagatct-tgattttaagttaactctcaca 239  Q
    |||||||||| |||||||  | ||||||||||||||||||||||    
T  3878364 tgccacgatt-ctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 27306533 - 27306767
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||| |||||    
T  27306533 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgctagcgcacca 27306632  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    ||||||||||| |||||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||||||||||||||| |||||  ||||||||||    
T  27306633 tcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttgcctcaaaactgaaacctccaatcgtgccacgttgtccagccatcgtgccacg 27306732  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    |||  |||| | | | ||||||||||||||||||||    
T  27306733 att-ttgcaaaaccttattttaagttaactctcaca 27306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 240 - 366
Target Start/End: Original strand, 6865584 - 6865710
Alignment:
Q  240 acaaaggtgggttcggagatgagggacttccatgacttactcacatacttcagtcgcataagttgttttacggtaagccatgatagcacttcaacgatga 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6865584 acaaaggtgggttcggagatgagggacttccatgacttactcacatacttcagtcgcataagttgttttacggtaagccatgatagcacttcaacgatga 6865683  T
Q  340 gttcgtcagggaggaatactgatgatg 366  Q
    |||||||||||||||||||||||||||    
T  6865684 gttcgtcagggaggaatactgatgatg 6865710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 1049596 - 1049813
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||| ||    
T  1049596 ttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgca 1049695  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    || |||                     |||||||||||||||||| | |||| |||||  |||||||||||||||||||||||||||||||| |||||||    
T  1049696 ccttcg---------------------tgccacgatttttccagtaccttgcttcaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgcc 1049774  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1049775 acgattcctgcagatcttgattttaagttaactctcaca 1049813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 18567598 - 18567363
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-tatgtttctgtttttcgctgccagcacacc 102  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||  ||||| || ||||||||| |||| ||||||| ||||    
T  18567598 ctctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaatt-tgcaccaaaaaaatacgtttctgttattcgttgccagcgcacc 18567500  T
Q  103 atcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccac 202  Q
    ||||||||| | || ||||||||||||||||||    |||||||  ||||||||||  ||||||||||||||||||||| |||||||||  |||||||||    
T  18567499 atcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccactttgcccagctatcgtgccac 18567400  T
Q  203 gattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||| ||| ||| | ||||||||||| ||||||||||    
T  18567399 gatttctgtagaacctgattttaagtcaactctcaca 18567363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 31435351 - 31435586
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-tatgtttctgtttttcgctgccagcacacc 102  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||  ||||| || ||||||||| |||| ||||||| ||||    
T  31435351 ctctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaatt-tgcaccaaaaaaatacgtttctgttattcgttgccagcgcacc 31435449  T
Q  103 atcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccac 202  Q
    ||||||||| | || ||||||||||||||||||    |||||||  ||||||||||  ||||||||||||||||||||| |||||||||  |||||||||    
T  31435450 atcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccactttgcccagctatcgtgccac 31435549  T
Q  203 gattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||| ||| ||| | ||||||||||| ||||||||||    
T  31435550 gatttctgtagaacctgattttaagtcaactctcaca 31435586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40837043 - 40837158
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttcgctgccagcac 99  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  40837043 ttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaaatatgtttctatttttcgctgccagcac 40837142  T
Q  100 accatcgtgccacgat 115  Q
    ||||||||||||||||    
T  40837143 accatcgtgccacgat 40837158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 22392458 - 22392319
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||| ||  ||||| |||||    
T  22392458 ctctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgcactgaaaaatacatttctgttttttgcctccagcgcacca 22392359  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttcca 143  Q
    |||| ||||| ||||| ||||||||| |||||||| ||||    
T  22392358 tcgtaccacgttgcgatcccatcgtggcacgatttctcca 22392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 1047318 - 1047504
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||     
T  1047318 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 1047416  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||||||||||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||    
T  1047417 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 1047504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 26804551 - 26804344
Alignment:
Q  11 acaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgcc 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| || ||||||||| ||||||||||||    
T  26804551 acaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttatttgctgccagcgcaccatcgtgcc 26804453  T
Q  111 acgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctg 210  Q
    ||                     |||||||||| ||| ||||||||||  |||||||||||||||| ||||||||||||||  ||||||||||||| |||    
T  26804452 ac---------------------gatttttccactgccttgcctcaaaactgaaacctccaatcgtaccacgttgcccagccatcgtgccacgatt-ctg 26804375  T
Q  211 cag-atcttgattttaagttaactctcacaa 240  Q
     || | | |||||||||||||||||||||||    
T  26804374 tagaaacctgattttaagttaactctcacaa 26804344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 2935255 - 2935070
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| ||||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  2935255 aacaaatctgctctcaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 2935157  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | ||||||||||||||||||||||    
T  2935156 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 22137063 - 22136877
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  22137063 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 22136965  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  22136964 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 22136877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 40552090 - 40551904
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  40552090 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 40551992  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  40551991 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 40551904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 9027502 - 9027687
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  9027502 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 9027600  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | ||||||||||||||||||||||    
T  9027601 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 22108052 - 22107866
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  22108052 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 22107954  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||| | |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  22107953 ccaaaaaactaaaacctgc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 22107866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 40549812 - 40549626
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  40549812 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 40549714  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||| | |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  40549713 ccaaaaaactaaaacctgc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 40549626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 45366526 - 45366446
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcg 89  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  45366526 atacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcactgaaaaatacgtttctgtttttcg 45366446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 40837144 - 40837261
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttg 219  Q
    |||||||||||||||||||||||||| ||||||  |||  |||||||||| |||||||||||||| ||  |  ||||||||||||| |||||| | | ||    
T  40837144 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgtccgaccatcgtgccacgatt-ctgcagaaacctg 40837241  T
Q  220 attttaagttaactctcaca 239  Q
    ||||||||||||||||||||    
T  40837242 attttaagttaactctcaca 40837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 42006545 - 42006410
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtg 108  Q
    ||||| ||||||||||||||||||||||| | |||||||| |||||||||||| ||||  |||||| |||| |||| ||  ||  || |  |||||||||    
T  42006545 atacacggtttatatttatagtaaaagtaacccttaaaatatggaacaaatcttcact-gaaaatacgtttatgttatttcct-tcaacgtaccatcgtg 42006448  T
Q  109 ccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    ||||| | |||  ||||||||||||||||||| |||||    
T  42006447 ccacgttacgattccatcgtgccacgattttttcagtg 42006410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 22251846 - 22251893
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttg 51  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  22251846 ctctgattcaaggtttatatttatagtaaaagtgtcgcttaaaatttg 22251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 1047239 - 1047295
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  1047239 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 1047295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 661389 - 661508
Alignment:
Q  240 acaaaggtgggttcggagatgagggacttccatgacttactcacatacttcagtcgcataagttgttttacggtaagccatgatagcacttcaacgatga 339  Q
    |||||||||||||| |||||||| |  ||||||||||||||||   |||||||| |||| ||| |||||||   |||  | || ||||||||| |||| |    
T  661389 acaaaggtgggttccgagatgagagtattccatgacttactcatgcacttcagtagcatcagtggttttacttgaaggaaggaaagcacttcagcgataa 661488  T
Q  340 gttcgtca-gggaggaatac 358  Q
    |||||||| |||||||||||    
T  661489 gttcgtcaggggaggaatac 661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 6067497 - 6067580
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttc 88  Q
    ||||||||| | ||||||||||||||||||| ||| || |||| ||||||||||||    | ||||||||||||| ||||||||    
T  6067497 tctgatacaggatttatatttatagtaaaagcatccctaaaaaattggaacaaatccaggcccaaaaatatgtttatgtttttc 6067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 7351964 - 7352018
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||||||||||||||||||||||||  || | |||||||||||||||    
T  7351964 ctgatacaaggtttatatttatagtaaaagtataactcataaatttggaacaaat 7352018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1606458 - 1606399
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||| ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  1606458 ttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 1606399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 6332211 - 6332176
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatc 39  Q
    |||||||||||| |||||||||||||||||||||||    
T  6332211 ctctgatacaagttttatatttatagtaaaagtatc 6332176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2935341 - 2935279
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  2935341 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 2935279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 3035700 - 3035646
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  3035700 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 3035646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 7188528 - 7188470
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatct 61  Q
    ||||||||||| || ||||||||||||||||||||| || | ||| |||||||||||||    
T  7188528 ctctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatct 7188470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 7349585 - 7349639
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  7349585 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 7349639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9027405 - 9027467
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  9027405 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 9027467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 11757207 - 11757153
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  11757207 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 11757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 18345520 - 18345466
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  18345520 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 18345466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 22087874 - 22087824
Alignment:
Q  248 gggttcggagatgagggacttccatgacttactcacatacttcagtcgcat 298  Q
    ||||||||| |||||| |||||||||||||||||| | ||||||| |||||    
T  22087874 gggttcggacatgaggtacttccatgacttactcaaacacttcagccgcat 22087824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22108149 - 22108087
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  22108149 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22108087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22137160 - 22137098
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  22137160 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22137098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 28485545 - 28485491
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  28485545 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 28485491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 38393965 - 38393911
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  38393965 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 38393911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 38396269 - 38396215
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  38396269 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 38396215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40549909 - 40549847
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  40549909 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 40549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40552187 - 40552125
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  40552187 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 40552125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 43253830 - 43253884
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  43253830 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 43253884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 31156218 - 31156271
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||| | |||||||||||||||||||| ||| | |||||||||||||||    
T  31156218 tgatacaagctctatatttatagtaaaagtatagctcataaatttggaacaaat 31156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 6048777 - 6048725
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||||||||||| ||||||||||||| |||  | |||| |||||||||||||    
T  6048777 atacaaggtttatgtttatagtaaaagcatccttaaaaaattggaacaaatct 6048725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7092480 - 7092512
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaa 33  Q
    ||||||||||||||||| |||||||||||||||    
T  7092480 ttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 20299437 - 20299405
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtat 38  Q
    |||||||||||| ||||||||||||||||||||    
T  20299437 ctgatacaaggtctatatttatagtaaaagtat 20299405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5198452 - 5198217
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5198452 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgca 5198353  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || || |    
T  5198352 ccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgcctcaaacttgaaatctccaatcgtgccacgttgcccagcaatcatgtc 5198253  T
Q  201 acgattcctgcagatcttgattttaagttaactctc 236  Q
    | ||||||||||||||||||||||||||||||||||    
T  5198252 atgattcctgcagatcttgattttaagttaactctc 5198217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 31849900 - 31850138
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    |||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31849900 ttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgca 31849999  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||||| |||||||    
T  31850000 ccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgccccaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgcc 31850099  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    || ||||||||||||||||||||||||||||||||||||    
T  31850100 acaattcctgcagatcttgattttaagttaactctcaca 31850138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 38409231 - 38408992
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||    
T  38409231 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgccgccaacgca 38409132  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  38409131 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgatgcccagcaatcgtgcc 38409032  T
Q  201 acgattcctgcagatct-tgattttaagttaactctcacaa 240  Q
    |||||| |||||||  | | |||||||||||||||||||||    
T  38409031 acgatt-ctgcagaaatctaattttaagttaactctcacaa 38408992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 24888828 - 24888594
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24888828 ttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 24888729  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  24888728 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagccatcgtgcc 24888629  T
Q  201 acgattcctgcagatct-tgattttaagttaactct 235  Q
    || ||| |||||||  | ||||||||||||||||||    
T  24888628 acaatt-ctgcagaaatctgattttaagttaactct 24888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22044691 - 22044931
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22044691 ttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcact-aaaaatatgtttctgtttttccctgccagcaca 22044789  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaact---tgaaacctccaatcgtgccacgttgcccagcagtcgt 197  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||     ||||||||||| ||||||||||||||||  || ||||    
T  22044790 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaaaatgaaacctcca-tcgtgccacgttgcccttcaatcgt 22044888  T
Q  198 gccacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22044889 gccacgattcctgcagatcttgattttaagttaactctcacaa 22044931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 36919891 - 36920126
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  | |||||||||||| |||||    
T  36919891 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctactattcgctgccagcgcacca 36919990  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  36919991 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttgcctcaaaattgaaacctccaatcgtgccacgttgcccagccatcgtgccacg 36920090  T
Q  204 attcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||  |||||| | |||||||||||||||||||||||    
T  36920091 att-ttgcagaacctgattttaagttaactctcacaa 36920126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 9148283 - 9148054
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| || |||||||         
T  9148283 ttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttatttgctgcca----- 9148190  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||    
T  9148189 ---tcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgcgccacgttgcccagcaatcgtacc 9148093  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  9148092 acgattcctgaagatcttgattttaagttaactctcaca 9148054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 5637770 - 5638006
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||    
T  5637770 ttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgtttttcgctgccagctca 5637868  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||| ||||||||||||| ||||||||| || |||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||| |||||||    
T  5637869 ccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgccacgttgcccagcaatcgtgcc 5637967  T
Q  201 acgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    |||||||| |||| | | ||||||||||||||||||||||    
T  5637968 acgattcc-gcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 3824877 - 3825113
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||  |||| | |||||    
T  3824877 ctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgtcgccaacgcacca 3824976  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||  ||||| ||||    
T  3824977 tcgtgccacgatgcgaccccattgtgccatgatttttccagtgctttgcctcaaaactgaaacctccaatcgtgccatgttgcccagccatcgtgtcacg 3825076  T
Q  204 attcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||| |||||| | | |||||||||||||||||||||||    
T  3825077 att-ctgcagaaacctgattttaagttaactctcacaa 3825113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 22803038 - 22803240
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| |||||||||||| |||||    
T  22803038 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa-tacgtttttgttattcgctgccagcgcacca 22803136  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||  |||| |||||    
T  22803137 tcgtgccacgatgcgaccccatcgagccacgatttttccagtgcctttcctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacg 22803236  T
Q  204 attc 207  Q
    ||||    
T  22803237 attc 22803240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 36921799 - 36922033
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||||   |||||    
T  36921799 ctctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatacgtttctgttattcgctgccaatgcacca 36921898  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||  |||||||||||||||||||| ||||||||||  |||| |||||    
T  36921899 tcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttgcctcaaaactgaaacctccaatcgtgccatgttgcccagccatcgtaccacg 36921998  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    |||  |||||| | ||||||||||||||||||||||    
T  36921999 att-ttgcagaacctgattttaagttaactctcaca 36922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 48486348 - 48486112
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||    
T  48486348 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcacca 48486249  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    | |||||||  || ||||||||||||||||||    |||||||  ||||||||||  |||||||||||||||||||||||||| ||||  ||||||||||    
T  48486248 ttgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccacgttgctcagccatcgtgccacg 48486149  T
Q  204 attcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||| ||||||  | |||||||||||||||||||||||    
T  48486148 atttctgcaggacctgattttaagttaactctcacaa 48486112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 11006546 - 11006782
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| |||||||||||||||||| | ||||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  11006546 tctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagcgcaccat 11006645  T
Q  105 cgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||| ||||||||||| ||||||||||||||||||||  ||||||||||    
T  11006646 cgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattgaaacctcc-atcgtgccacgttgcccagcgatcgtgccacg 11006744  T
Q  204 attcctgc--agatcttgattttaagttaactctcacaa 240  Q
    ||| ||||  | | | |||||||||||||||||||||||    
T  11006745 att-ctgcataaaacctgattttaagttaactctcacaa 11006782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 51015278 - 51015042
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  51015278 ttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaaaatatgtttctgttattcgctgccagcgca 51015179  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |||  |||||||||| ||||||||||||||||  ||  || |||    
T  51015178 ccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcatgc 51015080  T
Q  200 cacgattcctgcagatct-tgattttaagttaactctca 237  Q
    ||||||| |||||||  | ||||||||||||||||||||    
T  51015079 cacgatt-ctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 9174447 - 9174685
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||||||  || ||||||||||||| |||||||||||||||||||||| |||||||| ||    
T  9174447 ttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatctgcacccaaaaatatgtttctgtttttccctgccagcgca 9174546  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctca-aacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| |||||| | ||  | |||||||| ||||||| |||||||| ||| |||||||    
T  9174547 ccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcctaataaactaaaacctcc-atcgtgctacgttgcctagccgtcgtgc 9174645  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  9174646 cacgatt-ctgcagaacctgattttaagttaactctcacaa 9174685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 22046986 - 22047135
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22046986 ttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcact-aaaaatatgtttctgtttttccctgccagcaca 22047084  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgc 152  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  22047085 ccatcgtgccacgatgcgatcccatcgtgcca-gatttttccagtgccttgc 22047135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 18847124 - 18846921
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||| | || ||| |||||||||||||||||||||||||||||| ||||||||||    
T  18847124 gctttaaatttgtaacaaatctgcacccaaaaatatgtttctgtttttccccgcgagcgcaccatcgtgccacgatgcgaccccatcgtaccacgatttt 18847025  T
Q  140 tccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag----atcttgattttaagttaactct 235  Q
    |||||| | ||||||||||  |||||||||||||||||||||| | |||| || ||||||||||||| ||||||    ||| ||||||||||||||||||    
T  18847024 tccagtaccttgcctcaaaactgaaacctccaatcgtgccacgattcccaacaatcgtgccacgatt-ctgcagaaaaatc-tgattttaagttaactct 18846927  T
Q  236 cacaac 241  Q
    ||||||    
T  18846926 cacaac 18846921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 619751 - 619986
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||  || |||||||||||||||||| ||||| |||||| |||||    
T  619751 ctctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaaaaaatctctacccaaaaatatgtttctgttattcgccgccagcgcacca 619850  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    | |||||||| |||||||||||||||||||||    |||| ||  ||||||||||  |||||| |||||| ||||||||||| ||  || |||||| ||     
T  619851 ttgtgccacgttgcgaccccatcgtgccacgaaaaatccaatgacttgcctcaaaactgaaacatccaattgtgccacgttgaccttcaatcgtgcgaca 619950  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||| || | | ||||||||||||||||||||||    
T  619951 attcctacataacctgattttaagttaactctcaca 619986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 37089680 - 37089910
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatc 105  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||  ||||||| ||||||||| ||||| |||||| |||||||    
T  37089680 ctgatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacctaaaaatacgtttctgttattcgccgccagcgcaccatc 37089779  T
Q  106 gtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacga 204  Q
    |||||||||||||||||||||||||||||||||||||||||| |  |||  |||  | |||| ||  ||||||||||||||||  ||  |||||||||||    
T  37089780 gtgccacgatgcgaccccatcgtgccacgatttttccagtgcctcacctaaaaaactaaaacatctcatcgtgccacgttgccttgccatcgtgccacga 37089879  T
Q  205 ttcctgcagatct-tgattttaagttaactct 235  Q
    || |||||||  | ||||||||||||||||||    
T  37089880 tt-ctgcagaaatctgattttaagttaactct 37089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 237
Target Start/End: Original strand, 40091722 - 40091952
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||  ||| ||||||| |||  ||||||||    
T  40091722 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcactgaaaaatacgtttacgttattcgctgtcagtgcaccatcg 40091821  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
    || |||| |||||||||||| || ||||||||||||| ||  || | |||||  ||||| |||||||||||||||||| |||| |   ||||||||||||    
T  40091822 tgtcacgttgcgaccccatcatggcacgatttttccaatggcttacttcaaaactgaaatctccaatcgtgccacgttacccaaccaccgtgccacgatt 40091921  T
Q  207 cctgcagatcttgattttaagttaactctca 237  Q
      |||||| | ||||||||||||||||||||    
T  40091922 attgcagaacctgattttaagttaactctca 40091952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11434987 - 11434873
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11434987 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgca 11434888  T
Q  101 ccatcgtgccacgat 115  Q
    |||||||||||||||    
T  11434887 ccatcgtgccacgat 11434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 40 - 239
Target Start/End: Original strand, 9176836 - 9177035
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    |||| ||||||  ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  9176836 gctttaaatttataacaaatctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttt 9176935  T
Q  140 tccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctca 237  Q
    |||||||| ||||||  |||  | |||||||| |||||||||||||||| | | |||||||||||||| |||||| | | ||||||||||||||||||||    
T  9176936 tccagtgccttgcctaaaaaactaaaacctcc-atcgtgccacgttgcctaaccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctca 9177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 24880476 - 24880299
Alignment:
Q  8 gatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgt 107  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||||| |||||||||    
T  24880476 gatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatacgtttctgttattcgctgccagcgcaccatcgt 24880377  T
Q  108 gccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttg 185  Q
    |||||| ||| | ||||||||||| |||    |||||||  ||||||||||  ||||||||||| |||||||||||||    
T  24880376 gccacgttgcaatcccatcgtgccgcgaaaaatccagtgacttgcctcaaaactgaaacctccattcgtgccacgttg 24880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 24879014 - 24878836
Alignment:
Q  8 gatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgt 107  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |||| |||||||  ||||||||    
T  24879014 gatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaaaatacgtttctgttattcgatgccagcgtaccatcgt 24878915  T
Q  108 gccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgc 186  Q
    |||||| ||| | |||||||||||||||    |||||||  |||| |||||  ||||||||||||||||||||||||||    
T  24878914 gccacgttgcaatcccatcgtgccacgaaaaatccagtgacttgcgtcaaaactgaaacctccaatcgtgccacgttgc 24878836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 11008932 - 11009046
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  11008932 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagtgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 11009031  T
Q  140 tccagtgctttgcct 154  Q
    |||||||| ||||||    
T  11009032 tccagtgccttgcct 11009046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 16932175 - 16932361
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||     
T  16932175 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 16932273  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||||||||||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||    
T  16932274 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 16932361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 52942756 - 52942881
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtg 108  Q
    ||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||  |||||||||||| |||| |||||||||||| || |||||||    
T  52942756 atacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcaccaaaaaatatgtttatgttattcgctgccagcgcatcatcgtg 52942855  T
Q  109 ccacgatgcgaccccatcgtgccacg 134  Q
    ||||| || |||||||||||||||||    
T  52942856 ccacgttgtgaccccatcgtgccacg 52942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 22801166 - 22801276
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| || |||||| || |||||    
T  22801166 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcactc-aaaatacgtttctgttatttgctgccggcgcacca 22801264  T
Q  104 tcgtgccacgat 115  Q
    ||||||||||||    
T  22801265 tcgtgccacgat 22801276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 47274755 - 47274647
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||| |||| |||||||||| | ||||||    
T  47274755 tctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaaaatacgtttatgttattcgctgccatcgcaccat 47274656  T
Q  105 cgtgccacg 113  Q
    |||||||||    
T  47274655 cgtgccacg 47274647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 7941351 - 7941240
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||   ||||| ||    
T  7941351 ttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgtcaccagcgca 7941252  T
Q  101 ccatcgtgccac 112  Q
    ||||||||||||    
T  7941251 ccatcgtgccac 7941240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 16934529 - 16934714
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | | |||| ||||||||||||| |||| |||||||||||||||||||||||||||||| |||     
T  16934529 aacaaatctgctcccaaaaatacgttt-tatttttatccgacagcgcaccatcgtgccaggatgagaccccatcgtgccacgatttttccagtgccttgc 16934627  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| ||||||||| |||||||||| |||||||||||||| |||||| | | ||||||||||||||||||||||    
T  16934628 ccaaaaaactaaaacctcc-atcgtgccatgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 16934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 22783132 - 22783317
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||     
T  22783132 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgc 22783230  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| ||||||||||||||||||||  |||| |||||||| |||||| | | ||||||||||||||||||||||    
T  22783231 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtaccacgatt-ctgcagaaacctgattttaagttaactctcaca 22783317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 8756554 - 8756679
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||  | ||||||||||||||| |||||  ||||| |||||    
T  8756554 ctctgatacaaggtctatatttatagtaaaagtatcgtttataatttggaacaaatctgcaccgagaaatatgtttctgttattcgcctccagcgcacca 8756653  T
Q  104 tcgtgccacgatgcgaccccatcgtg 129  Q
     | || |||| ||||| | |||||||    
T  8756654 acatggcacgttgcgatctcatcgtg 8756679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 22780767 - 22780953
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||| |||     
T  22780767 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacaatgagaccccatcgtgccatgatttttccagtgccttgc 22780865  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| ||||||||||||||||||||  |||| |||||||| |||||| | | |||||||||||||||||||||||    
T  22780866 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtaccacgatt-ctgcagaaacctgattttaagttaactctcacaa 22780953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 7941251 - 7941133
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atctt 218  Q
    |||||||||||| ||||||||||||| |||||||  |||  |||||||||| ||||||||||||||||||||  ||||||||||||| |||||| | | |    
T  7941251 ccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccagccatcgtgccacgatt-ctgcagaaacct 7941154  T
Q  219 gattttaagttaactctcaca 239  Q
    |||||||||||||||||||||    
T  7941153 gattttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 22801262 - 22801347
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattc 207  Q
    |||||||||||||||||||||||| | ||||||||||  ||||||||||||||||| ||||||||||| |  ||||||||||||||    
T  22801262 ccatcgtgccacgatttttccagttccttgcctcaaaactgaaacctccaatcgtgtcacgttgcccaaccatcgtgccacgattc 22801347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 22048498 - 22048576
Alignment:
Q  161 tgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||| ||||||||||||||||  || |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  22048498 tgaaacctcca-tcgtgccacgttgcccttcaatcgtgccacgattcttgcggatcttgattttaagttaactctcacaa 22048576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 11434887 - 11434769
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atctt 218  Q
    |||||||||||||||||||||||||  |||||||  |||  |||||||||| ||||||||||||||||||||  |||| |||||||| |||||| | | |    
T  11434887 ccatcgtgccacgatttttccagtgtcttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccagccatcgtaccacgatt-ctgcagaaacct 11434790  T
Q  219 gattttaagttaactctcaca 239  Q
    |||||||||||||||||||||    
T  11434789 gattttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 40999251 - 40999337
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgc 90  Q
    |||||||| |||||||||||||||||||||| || | |||||||||||||||||||||   || ||| ||| |||||||||||||||    
T  40999251 ctctgatataaggtttatatttatagtaaaaataacccttaaaatttggaacaaatctatcctgaaagatacgtttctgtttttcgc 40999337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 52942917 - 52943002
Alignment:
Q  149 ttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactc 234  Q
    ||||||||||  ||||||||||||||||||||||||||||| |  |||||||||||||  |||| | | |||||||||||||||||    
T  52942917 ttgcctcaaagctgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatttttgcaaaacctgattttaagttaactc 52943002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 4569980 - 4569902
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtt 84  Q
    |||||||||||| ||||||||||||| |||||| | |||||||| |||||||||||| ||||  |||||| |||||||||    
T  4569980 tctgatacaaggcttatatttatagtgaaagtaacccttaaaatatggaacaaatcttcact-gaaaatacgtttctgtt 4569902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 26557614 - 26557535
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttc 88  Q
    |||||||||||||||||||||||||| |||| || |||| ||||||||||||    || |||||||||||||| ||||||    
T  26557614 atacaaggtttatatttatagtaaaattatccctcaaaaattggaacaaatccatgcttaaaaatatgtttctatttttc 26557535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 16638712 - 16638646
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa 71  Q
    ||||||||||||||||||||| ||| || |||| | |||||||||||||||||| ||||||| ||||    
T  16638712 tctgatacaaggtttatatttttagaaagagtaacccttaaaatttggaacaaacctgcactgaaaa 16638646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16932090 - 16932152
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  16932090 ttgctttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16932152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16186141 - 16186199
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgct--taaaatttggaacaaatct 61  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||    
T  16186141 ctctgatacaaggtttatatttatagtaaaagtatccctcctaaaa-ttggaacaaatct 16186199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 22780688 - 22780744
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  22780688 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 22783053 - 22783109
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  22783053 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22783109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 52043735 - 52043791
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||||||||||| ||||||||||||||||| ||| || |||| |||||||||||||    
T  52043735 tctgatacaaggtctatatttatagtaaaagcatccctaaaaaattggaacaaatct 52043791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17662539 - 17662598
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  17662539 ttgctctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 17662598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16934444 - 16934506
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  16934444 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16934506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 25357663 - 25357585
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgct--taaaatttggaacaaatctgcactcaaaaatatgtttctgtt 84  Q
    ||||||||||| ||||||||||||||||||||| ||  ||||| ||||||||||||||  | |||||||| | |||||||    
T  25357663 tgatacaaggtctatatttatagtaaaagtatccctcgtaaaa-ttggaacaaatctgagcccaaaaatacgattctgtt 25357585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 11008876 - 11008918
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaat 48  Q
    |||||||||||| |||||||||||||||||| | |||||||||    
T  11008876 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaat 11008918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 22132705 - 22132759
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  22132705 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 22132759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 22295181 - 22295151
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaag 35  Q
    |||||||||||||||||||||||||||||||    
T  22295181 tctgatacaaggtttatatttatagtaaaag 22295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 47211052 - 47211106
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  47211052 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 47211106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 53405154 - 53405100
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  53405154 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 53405100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 53774044 - 53773990
Alignment:
Q  247 tgggttcggagatgagggacttccatgacttactcacatacttcagtcgcataag 301  Q
    |||| |||||||||||||  ||||||| |||||||||| |||||||| |||||||    
T  53774044 tgggatcggagatgagggtgttccatggcttactcacaaacttcagtagcataag 53773990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 22134937 - 22134990
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  22134937 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 22134990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 24348240 - 24348187
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  24348240 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 24348187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 28453715 - 28453658
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaa-atttggaacaaatct 61  Q
    ||||||||||||| |||||||||||||||| |||| || ||| | |||||||||||||    
T  28453715 tctgatacaaggtctatatttatagtaaaaatatccctcaaataattggaacaaatct 28453658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2485174 - 2485210
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  2485174 ttgctctgatacaaggtctatatttatagtgaaagta 2485210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6764871 - 6764835
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  6764871 ttgctctgatacaaggtctatatttatagtgaaagta 6764835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40637106 - 40637070
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  40637106 ttgctctgatacaaggtctatatttatagtgaaagta 40637070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 47868433 - 47868397
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  47868433 ttgctctgatacaaggtctatatttatagtgaaagta 47868397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 7 - 239
Target Start/End: Complemental strand, 15823518 - 15823286
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| || ||||| ||| ||||||||    
T  15823518 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatatgtttctgttatttgctgctagcgcaccatcg 15823419  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15823418 tgccacgatgcgaccccatcgtgccacgatttttctagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatt 15823319  T
Q  207 cctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||| ||||||||||||||||||||||    
T  15823318 cctgcagatcctgattttaagttaactctcaca 15823286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 28840656 - 28840418
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28840656 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 28840557  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| | |||||| |||  |||||||||||||||||||||||||||  ||  |||||||    
T  28840556 ccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttgcctaaaaactgaaacctccaatcgtgccacgttgccttgccatcgtgcc 28840457  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  28840456 acgattcctgcagatcctgattttaagttaactttcaca 28840418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 28842471 - 28842232
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  28842471 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaatatgtttctgtttttcgctgccaggaca 28842372  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||| |||  ||  |||||||    
T  28842371 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgcctaaaaactgaaacctccaatcgtgccacgtagccttgccatcgtgcc 28842272  T
Q  201 acgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||| |||||| |||||||||||||||| ||||||    
T  28842271 acgattcctacagatcctgattttaagttaactttcacaa 28842232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 10400131 - 10400371
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| |||||||| |||| |||| || ||||||||| ||    
T  10400131 ttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttatttgctgccagcgca 10400230  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10400231 ccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcaatcgtgcc 10400330  T
Q  201 acgattcctgcag-atcttgattttaagttaactctcacaac 241  Q
    |||||||| |||| | | ||||||||||||||||||||||||    
T  10400331 acgattcc-gcagaaacctgattttaagttaactctcacaac 10400371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13761815 - 13761576
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||    
T  13761815 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagcaca 13761716  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||| ||| ||||||||||||||||  ||||||    
T  13761715 ccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcatgccacgttgcccagccatcgtgc 13761617  T
Q  200 cacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||||||| |||||| | | |||||||||||||||||||||||    
T  13761616 cacgatt-ctgcagaaacctgattttaagttaactctcacaa 13761576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 51750017 - 51749778
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||| ||    
T  51750017 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgca 51749918  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtg 198  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||  |||||||||| ||||| |||||||||||| |  |||||    
T  51749917 ctatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtaccacgttgcccaaccatcgtg 51749819  T
Q  199 ccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    |||||||| |||||| | ||||||||||||||||||||||||    
T  51749818 ccacgatt-ctgcagaaacttgattttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 51752343 - 51752103
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||| |||| ||||| |||||| ||    
T  51752343 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgccgccagcgca 51752244  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtg 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||  |||  |||||||||| |||||||||||||||||| |  |||||    
T  51752243 ccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccaaccatcgtg 51752145  T
Q  199 ccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |||||||| |||||| | | |||||||||||||||||||||||    
T  51752144 ccacgatt-ctgcagaaacctgattttaagttaactctcacaa 51752103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 20302437 - 20302197
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||| ||    
T  20302437 ttgctctgatacaaggtctatatttataataaaagtttcacttaaaatttggaacaaatatgcacccaaaaatatgtttctgttattcgccgccagcgca 20302338  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtg 198  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||  |||||||||| ||||||||||||||||  ||  || ||    
T  20302337 ccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcatg 20302239  T
Q  199 ccacgattcctgcagatct-tgattttaagttaactctcacaa 240  Q
    || ||||| |||||||  | |||||||||||||||||||||||    
T  20302238 ccgcgatt-ctgcagaaatctgattttaagttaactctcacaa 20302197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 6823862 - 6823655
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| |||||||| |||| |||| ||||| |||||| ||    
T  6823862 ttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgccgccagcgca 6823763  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtg 198  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||  |||||||||| |||||||||||||||||| |  |||||    
T  6823762 ccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccaaccatcgtg 6823664  T
Q  199 ccacgattc 207  Q
    ||| |||||    
T  6823663 ccatgattc 6823655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 3579926 - 3580160
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatc 105  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||| || | ||||| |||||| |||||||    
T  3579926 ctgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaacaaatttgcactctaaaatacgtttatgatattcgccgccagcgcaccatc 3580025  T
Q  106 gtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgat 205  Q
    |||||||| ||| | |||| ||| |||||||||||||| ||  |||||||| |  |||||| |||||| ||| |||||||||| ||| ||||||||||||    
T  3580026 gtgccacgttgcaatcccaccgtaccacgatttttccaatgacttgcctcataactgaaacatccaattgtgtcacgttgccctgcaatcgtgccacgat 3580125  T
Q  206 tcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||| | | ||||||||||||||||| |||||    
T  3580126 tcctgcataacctgattttaagttaactcccacaa 3580160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 13215056 - 13214854
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||| || ||||||| |||||||    
T  13215056 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttttgttatttgctgccaacacacca 13214957  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||| ||| | |||||| ||||||||    |||||||  ||||||||||  ||||||||||||||||||||||||||||| |  ||||||||||    
T  13214956 tcgtgccacgttgcaatcccatcatgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccacgttgcccaaccatcgtgccacg 13214857  T
Q  204 att 206  Q
    |||    
T  13214856 att 13214854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 30790700 - 30790936
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| |  ||||| |||||    
T  30790700 ctctgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaaaatacgtttatgtttttcccctccagcgcacca 30790799  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||  ||||| |||||||||||||| |||||||||||  |||| ||| |  |||||| |||||||||||||| |||| | |||  |||| ||||    
T  30790800 tcgtgccacattgcgatcccatcgtgccacgttttttccagtgacttgcttcataactgaaacatccaatcgtgccacattgctctgcaaacgtgtcacg 30790899  T
Q  204 attcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||| || |||| | || |||||||||| |||||||||    
T  30790900 atttctccagaacctggttttaagttagctctcacaa 30790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 4 - 182
Target Start/End: Complemental strand, 41646895 - 41646717
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||  |||||    
T  41646895 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatatgtttctgttattcgctgccagtgcacca 41646796  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacg 182  Q
    |||||||||| ||| | |||| ||||||||||    |||||||  ||||||||||  ||||||||| ||||||||||||    
T  41646795 tcgtgccacgttgcaatcccaccgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctctaatcgtgccacg 41646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 182
Target Start/End: Original strand, 28207373 - 28207550
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||| ||||| |||||| ||||||    
T  28207373 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaaaacgtttatgttattcgccgccagcgcaccat 28207472  T
Q  105 cgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacg 182  Q
    ||||||||| || ||||||||||||||| ||    |||| ||  |||||||||| |||||||||||||||||||||||    
T  28207473 cgtgccacgttgtgaccccatcgtgccatgaaaaatccaatgacttgcctcaaagttgaaacctccaatcgtgccacg 28207550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 39462494 - 39462258
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttcgctgccagcacacc 102  Q
    |||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||||||| | ||||||| ||||||||| ||| |||| ||| ||||    
T  39462494 ctctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcacccaaaaaatacgtttctgttattcactgcaagcgcacc 39462395  T
Q  103 atcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccac 202  Q
    ||||||||||  ||| | |||||||||||||||    |||| ||  ||||||||||  ||||||||| ||||||||||||||||||| |  | ||| |||    
T  39462394 atcgtgccacattgcaatcccatcgtgccacgaaaaatccactgacttgcctcaaaactgaaacctctaatcgtgccacgttgcccaaccattgtgtcac 39462295  T
Q  203 gattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||| ||||||| | ||||||||||||||||||||||    
T  39462294 gatttctgcagaacctgattttaagttaactctcaca 39462258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 47451623 - 47451508
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||| ||||||| |||| |||||    
T  47451623 ctctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaacaaatctgcaccaaaaaatacgtttctgttattcgctgtcagcgcacca 47451524  T
Q  104 tcgtgccacgatgcga 119  Q
    ||||||||||||||||    
T  47451523 tcgtgccacgatgcga 47451508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 47177274 - 47177077
Alignment:
Q  41 cttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttt 140  Q
    |||||||| || ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  47177274 cttaaaatctgtaacaaatctgctcccaaaaataggttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgattttt 47177176  T
Q  141 ccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||||||  |||||  |||  | |||||||| |||||||||||||||||||  |||||||||||||| |||||| | | ||||||||||||||||||||||    
T  47177175 ccagtgtcttgcccaaaaactaaaacctcc-atcgtgccacgttgcccagtcgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 47177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 242
Target Start/End: Complemental strand, 16226083 - 16225884
Alignment:
Q  41 cttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttt 140  Q
    |||||||| || ||||||||||||| ||||| ||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16226083 cttaaaatctgtaacaaatctgcacccaaaa-tatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttt 16225986  T
Q  141 ccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcac 238  Q
    ||||||| ||| ||  |||  | |||||||| |||||||||||||||||| | |||||||||||||| |||||| | | |||||||||||||||||| ||    
T  16225985 ccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccaaccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactcttac 16225888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 47179625 - 47179427
Alignment:
Q  41 cttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttt 140  Q
    |||||||| || ||||||||||| | |||||||| |||| | |||||  | || ||| |||||||||||||||||| |||||||||||||||||||||||    
T  47179625 cttaaaatctgtaacaaatctgctcccaaaaatacgttt-tatttttatccgcaagcgcaccatcgtgccacgatgagaccccatcgtgccacgattttt 47179527  T
Q  141 ccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcac 238  Q
     |||||| ||| ||  |||  | |||||||| |||||||||||||||||||| |||||||||||||| |||||| | | |||||||||||||||||||||    
T  47179526 tcagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcac 47179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6822993 - 6822879
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||| || ||||| |||||| ||    
T  6822993 ttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacatttctattattcgccgccagcgca 6822894  T
Q  101 ccatcgtgccacgat 115  Q
    |||||||||||||||    
T  6822893 ccatcgtgccacgat 6822879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 38925784 - 38925892
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||   ||||||| |||||||||| | | |||    
T  38925784 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaataaatctgcacccaaaaatacacttctgttgttcgctgccaacgcccca 38925883  T
Q  104 tcgtgccac 112  Q
    |||||||||    
T  38925884 tcgtgccac 38925892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 49687496 - 49687405
Alignment:
Q  23 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacga 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||| |||| ||||||||||||||||    
T  49687496 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgtcagcgcaccatcgtgccacga 49687405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 14098279 - 14098385
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| |||||||||||| |||||||  ||||||||||||||| ||||||||| |||||||| |||| |||| |||||||||||| ||||||||    
T  14098279 tgatacaaggtctatatttatagtgaaagtattacttaaaatttggaac-aatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcg 14098377  T
Q  107 tgccacga 114  Q
    ||| ||||    
T  14098378 tgcaacga 14098385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 6822893 - 6822774
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atctt 218  Q
    |||||||||||||||||||||||||| |||||||  |||  |||||||||| ||||||||||||||||||||  ||||||||||||| |||||| | | |    
T  6822893 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccagccatcgtgccacgatt-ctgcagaaacct 6822796  T
Q  219 gattttaagttaactctcacaa 240  Q
    ||||||||||||||||||||||    
T  6822795 gattttaagttaactctcacaa 6822774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 101 - 239
Target Start/End: Complemental strand, 23783376 - 23783238
Alignment:
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |||||||| ||  ||||||| |||||||    
T  23783376 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgc 23783278  T
Q  200 cacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    |||||||  ||||| | | ||||||||||||||||||||||    
T  23783277 cacgatt-gtgcagaaacctgattttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 38925920 - 38925996
Alignment:
Q  161 tgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctca 237  Q
    |||||||||||||||||||||||||||||||  |||| |||||||| |||| || | ||||||||||||||||||||    
T  38925920 tgaaacctccaatcgtgccacgttgcccagccatcgtaccacgatttctgcggaacctgattttaagttaactctca 38925996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 23783444 - 23783362
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgat 136  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||    
T  23783444 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 23783362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 47451496 - 47451405
Alignment:
Q  148 tttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||||  ||||||||||||||||||||| |||||||||  ||||||||||||| ||||| |   |||||| |||||||||||||||    
T  47451496 tttgcctcaaaactgaaacctccaatcgtgccacattgcccagccatcgtgccacgatttctgcaaaatctgatttgaagttaactctcaca 47451405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 49687400 - 49687301
Alignment:
Q  140 tccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||  ||||||||||  ||||||||||||| |||||||||||||||||  || |||||||||| || || | | ||||||||||||||||||||||    
T  49687400 tccagtgacttgcctcaaaactgaaacctccaattgtgccacgttgcccagccatcatgccacgatttctacataacctgattttaagttaactctcaca 49687301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 2401492 - 2401568
Alignment:
Q  5 tctgatacaaggtttatatttatagta-aaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttc 80  Q
    |||||||||||| |||||||||||||  |||||||| |||||||| |||||||||||| |||| ||||||| |||||    
T  2401492 tctgatacaaggcttatatttatagtggaaagtatcccttaaaatatggaacaaatcttcactgaaaaatacgtttc 2401568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 43104134 - 43104051
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgct-taaaatttggaacaaatctgcactcaaaaatatgtttctgtttt 86  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||  ||||||||||||   | ||||||||||||||||||||    
T  43104134 ctctgatacaaggtctatatttatagtaaaagtatccctcaaaaaactggaacaaatctaagcccaaaaatatgtttctgtttt 43104051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 46783029 - 46782944
Alignment:
Q  5 tctgatacaaggtttatatt---tatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgttttt 87  Q
    ||||||||||||||||||||   ||||||||||||| | ||||||||||||||||||| |||||| |||| |   |||||||||||    
T  46783029 tctgatacaaggtttatattatttatagtaaaagtaacccttaaaatttggaacaaatatgcacttaaaagtgcatttctgttttt 46782944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 16231458 - 16231373
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattc 207  Q
    |||||||||||||||||||||||||  |||||  |||   | ||||||||| ||||||||||||||||||| |||||||||||||||    
T  16231458 ccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattc 16231373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16231579 - 16231517
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||||||| || |||||||||||    
T  16231579 ttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 16231517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 13461347 - 13461392
Alignment:
Q  194 tcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  13461347 tcgtggcacgattcctgcagatcctgattttaagttaactctcaca 13461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 2393578 - 2393654
Alignment:
Q  5 tctgatacaaggtttatatttatagta-aaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttc 80  Q
    |||||||||||| |||||||||||||  ||| |||| |||||||| |||||||||||| |||| ||||||| |||||    
T  2393578 tctgatacaaggcttatatttatagtggaaaatatcccttaaaatatggaacaaatcttcactgaaaaatacgtttc 2393654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 14098443 - 14098511
Alignment:
Q  172 atcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||| ||| ||||  ||||||||||||| |||||||   |||||||||||||||||||||||    
T  14098443 atcgtgccacggtgctcagccatcgtgccacgatttctgcagaatctgattttaagttaactctcacaa 14098511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16226145 - 16226085
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||||||| || |||||||||    
T  16226145 ttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatct 16226085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 16231518 - 16231444
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgat 115  Q
    ||||||||| || ||||||||||||| ||||||||||||| | |||||  | |||||| |||||||||||||||||    
T  16231518 gcttaaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgat 16231444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24325634 - 24325575
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  24325634 ttgctctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 24325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20291435 - 20291390
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaa 46  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||    
T  20291435 ttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaa 20291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 41646726 - 41646681
Alignment:
Q  194 tcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||    
T  41646726 tcgtgccacgatttctgcagaacatgattttaagttaactctcaca 41646681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 25133957 - 25133878
Alignment:
Q  5 tctgatacaaggtttatatttatagta-aaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtt 84  Q
    |||||||||||  |||||||||||||  |||||| | |||||||| |||||||||||| ||||  ||||||||||||||||    
T  25133957 tctgatacaagacttatatttatagtggaaagtaacccttaaaatatggaacaaatcttcact-gaaaatatgtttctgtt 25133878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26613547 - 26613603
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||||||||||| ||||||||||| ||||| ||| || |||| |||||||||||||    
T  26613547 tctgatacaaggtctatatttatagcaaaagaatccctcaaaaattggaacaaatct 26613603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47177336 - 47177276
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||    
T  47177336 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 47177276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47179687 - 47179627
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||    
T  47179687 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 47179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 18800875 - 18800910
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatc 39  Q
    |||||||||||||| |||||||||||||||||||||    
T  18800875 ctctgatacaaggtctatatttatagtaaaagtatc 18800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 49959018 - 49958963
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatc 60  Q
    ||||||||||||| ||||||||||| ||||| ||| |  |||||||||||||||||    
T  49959018 tctgatacaaggtctatatttatagcaaaagcatcccacaaaatttggaacaaatc 49958963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 2510636 - 2510690
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  2510636 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 2510690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 9459731 - 9459785
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  9459731 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 9459785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 9463558 - 9463612
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  9463558 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 9463612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23783529 - 23783467
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  23783529 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23783467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 27916469 - 27916415
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    |||||||| || ||||||||||||||||||||| ||  ||| |||||||||||||    
T  27916469 tgatacaatgtctatatttatagtaaaagtatccctccaaaattggaacaaatct 27916415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 31735833 - 31735887
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  31735833 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 31735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 42922209 - 42922151
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatct 61  Q
    |||||||||||  | ||||||||||||||||||||| || | |||||||||||||||||    
T  42922209 ctctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatct 42922151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 46432036 - 46432090
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  46432036 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 46432090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 47906237 - 47906183
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  47906237 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 47906183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 14996921 - 14996872
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaa 58  Q
    |||||| ||||||||||||||| |||| ||| ||||||| ||||||||||    
T  14996921 atacaaagtttatatttatagtgaaagcatcccttaaaaattggaacaaa 14996872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 20291386 - 20291280
Alignment:
Q  134 gatttttccagtgctttgcctcaaact--tgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatct-tgattttaagtta 230  Q
    ||||||||||||||  |||||||||    |||||||||||  ||||||||||||||  ||  |||||||||||||| ||||||  | |||||||||||||    
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacctccac-cgtgccacgttgccttgccatcgtgccacgattc-tgcagaaatctgattttaagtta 20291289  T
Q  231 actctcaca 239  Q
    |||||||||    
T  20291288 actctcaca 20291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 155674 - 155618
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||||||||| |||| |||||||||||||| ||| || |||| ||| |||||||||    
T  155674 tctgatacaagatttacatttatagtaaaaggatccctcaaaaattgaaacaaatct 155618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 12302817 - 12302849
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||| |||||||||||||||||||    
T  12302817 tctgatacaaggtctatatttatagtaaaagta 12302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15295151 - 15295183
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaa 33  Q
    ||||||||||||||||| |||||||||||||||    
T  15295151 ttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 28207541 - 28207581
Alignment:
Q  194 tcgtgccacgattcctgcagatcttgattttaagttaactc 234  Q
    ||||||||||||| ||||||| | |||||||||||||||||    
T  28207541 tcgtgccacgatttctgcagaacctgattttaagttaactc 28207581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 48665146 - 48665090
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||| |||||| ||||||||||||||||||||  || | |||||||||||||||    
T  48665146 ctctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 48665090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 12517327 - 12517565
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12517327 ttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaatatgtttctgtttttcgctgccagcaca 12517426  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||  |||||||||||||||||||||||||||  ||  |||||||    
T  12517427 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattgcctcaaaactgaaacctccaatcgtgccacgttgccttgccatcgtgcc 12517526  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  12517527 acgattcctgcagatcctgattttaagttaactctcaca 12517565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 27827020 - 27826781
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  27827020 ttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttttgtttttcgctgccagcgca 27826921  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||||||| ||||||    
T  27826920 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcttcaaaaaatgaaacctcc-atcgtgccacgttgcccagcaatcgtgc 27826822  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27826821 cacgattcctgcagatcctgattttaagttaactctcacaa 27826781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 27829331 - 27829092
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  27829331 ttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttttgtttttcgctgccagcgca 27829232  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||  |||||||||| ||||||||||||||||||||| ||||||    
T  27829231 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgcctcaaaaaatgaaacctcc-atcgtgccacgttgcccagcaatcgtgc 27829133  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27829132 cacgattcctgcagatcctgattttaagttaactctcacaa 27829092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 14807785 - 14807552
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||    
T  14807785 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa-tacgtttatgtttttcgctgccagcgca 14807687  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |  || ||||    
T  14807686 ccaccgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgtcacgttgcccaaccatcatgcc 14807587  T
Q  201 acgattcctgcag-atcttgattttaagttaactct 235  Q
    |||||| |||||| | | ||||||||||||||||||    
T  14807586 acgatt-ctgcagaaacctgattttaagttaactct 14807552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 15072740 - 15072505
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||| ||||||    
T  15072740 tctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcacccaaaaatacgtttctgttattcgctgccagcgcaccat 15072641  T
Q  105 cgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacga 204  Q
    | ||||||| ||||| ||||||||| ||||||||||| ||||  |||| |||||  ||||||||||||||||| |||||||||||||  ||||| |||||    
T  15072640 catgccacgttgcgatcccatcgtgacacgatttttctagtggcttgcttcaaaactgaaacctccaatcgtgtcacgttgcccagccatcgtgtcacga 15072541  T
Q  205 ttcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||||||||   |||||||||||||||||||||||    
T  15072540 ttcctgcagaatctgattttaagttaactctcacaa 15072505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 240
Target Start/End: Complemental strand, 15068009 - 15067776
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||| ||||||||    
T  15068009 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttttgttattcgctgccagcgcaccatcg 15067910  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
    ||||||| ||||| ||||||||| || |||||||||||||  |||| |||||  |||||||||||||||||||| ||||||||||  || ||||||||||    
T  15067909 tgccacgttgcgatcccatcgtggcatgatttttccagtggcttgcttcaaaactgaaacctccaatcgtgccatgttgcccagccatcttgccacgatt 15067810  T
Q  207 cctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||| |   ||||||||||||||| |||||||    
T  15067809 cctgcaaaatctgattttaagttaacactcacaa 15067776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 28251874 - 28252122
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat-- 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | ||||||      
T  28251874 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa-tacgtttctgtttttcgctgccaacgcaccatcg 28251972  T
Q  105 -------------------cgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttg 185  Q
                       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28251973 taccacgatgcgatcccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtaccacgttg 28252072  T
Q  186 cccagcagtcgtgccacgattcctgcagatcttgattttaagttaactct 235  Q
    || |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  28252073 cctagccatcgtgccacgattcctgcagatcctgattttaagttaactct 28252122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 4424052 - 4423835
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  4424052 ttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctatttttcgctgccagcgca 4423953  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||                     |||||||||||||| |||||| |||  ||||||||||||| |||||||||||||||||| | |||||    
T  4423952 ccatcgtgccac---------------------gatttttccagtgccttgccttaaaactgaaacctccaattgtgccacgttgcccagcaattgtgcc 4423874  T
Q  201 acgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4423873 acgattcctgcagatcttgattttaagttaactctcaca 4423835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 44720816 - 44720616
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44720816 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttt-gctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 44720718  T
Q  140 tccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag--atcttgattttaagttaactctca 237  Q
    |||||| | ||||||||||  |||||||||||| ||||||||  ||||||||| || |||||||||| ||||||  | | ||||||||||||||||||||    
T  44720717 tccagtaccttgcctcaaaactgaaacctccaaacgtgccacaatgcccagcaatcatgccacgatt-ctgcagaaaacctgattttaagttaactctca 44720619  T
Q  238 caa 240  Q
    |||    
T  44720618 caa 44720616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 18812862 - 18812667
Alignment:
Q  44 aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 143  Q
    ||||| || ||||||||||||| ||||||||||||| | |||||  | |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18812862 aaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 18812764  T
Q  144 gtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |||| ||||||  |||  | |||||||| |||||||||||||||||||| |||||||||||||| || ||| | | |||||||||||||||||||||||    
T  18812763 gtgccttgcctaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-cttcagaaacctgattttaagttaactctcacaa 18812667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3886219 - 3886336
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc---aaaaatatgtttctgtttttcgctgccagc 97  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |   ||||||||||||||||| ||||||||||||    
T  3886219 ttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaaaaaaatatgtttctgttattcgctgccagc 3886318  T
Q  98 acaccatcgtgccacgat 115  Q
    |||||||||| |||||||    
T  3886319 acaccatcgtaccacgat 3886336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 44 - 239
Target Start/End: Complemental strand, 18810677 - 18810483
Alignment:
Q  44 aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 143  Q
    ||||| || ||||||||||||| ||||||| ||||| | |||||  | |||||| |||||||||||||||||| |||||||||||||| | |||||||||    
T  18810677 aaaatctgtaacaaatctgcacccaaaaatgtgttt-tatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccgcaatttttcca 18810579  T
Q  144 gtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    |||| ||||||  |||  | |||||||| |||||||||||||||||||| |||||||||||||| |||||| | | ||||||||||||||||||||||    
T  18810578 gtgccttgcctaaaaaaataaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 2468405 - 2468511
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||  ||||| ||||||||    
T  2468405 tgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatctgcactaaaaaatacgtttctgttattcgcatccagcgcaccatcg 2468504  T
Q  107 tgccacg 113  Q
    |||||||    
T  2468505 tgccacg 2468511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 43079494 - 43079346
Alignment:
Q  92 gccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccag 190  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||  |||  | |||||||| ||||||||||||||||  |    
T  43079494 gccagcgcaccatcgtgccacgatgagaccccatcgtaccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgccttg 43079396  T
Q  191 cagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    | |||||||||||||| |||||| | | |||||||||||||||||||||||    
T  43079395 ccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 43079346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 43081861 - 43081721
Alignment:
Q  100 accatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtg 198  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |||||||||| |||||  || ||||||    
T  43081861 accatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccactttgccttgccgtcgtg 43081763  T
Q  199 ccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |||||||| |||||| | | |||||||||||||||||||||||    
T  43081762 ccacgatt-ctgcagaaacctgattttaagttaactctcacaa 43081721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 17847558 - 17847475
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttc 88  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| |    ||||||||||||| ||||||    
T  17847558 tctgatacaaggtctatatttatagtaaaagtatccctcaaaatttggaacaaatctgaagctgaaaatatgtttctatttttc 17847475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18810742 - 18810680
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||||||||||||| | |||||||||||||||||| || ||||||||||| |||||||||||    
T  18810742 ttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgc 18810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 31162241 - 31162165
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatctgcactcaaaaatatgtttctg 82  Q
    ||||||||||| ||||||||||||||||||||| || | ||| |||||||||||||   ||||||||||||||||||    
T  31162241 tgatacaaggtctatatttatagtaaaagtatccctcataaaattggaacaaatctcagctcaaaaatatgtttctg 31162165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 15186014 - 15186097
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatctgcactcaaaaatatgtttctgtttt 86  Q
    ||||||||||| |||||||||||||||||||||||| || | ||| |||||||||||||   | | |||||| |||||||||||    
T  15186014 ctctgatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctaggcccgaaaatacgtttctgtttt 15186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 31035097 - 31035041
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 62  Q
    ||||||||||||| |||||||||||||||| |||| || |||| ||||||||||||||    
T  31035097 tctgatacaaggtctatatttatagtaaaaatatc-ctaaaaaattggaacaaatctg 31035041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 43530158 - 43530121
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtat 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43530158 ttgctctgatacaaggtctatatttatagtaaaagtat 43530121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 6376020 - 6375985
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatc 39  Q
    |||||||||||||| |||||||||||||||||||||    
T  6376020 ctctgatacaaggtctatatttatagtaaaagtatc 6375985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 14419497 - 14419576
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaac-aaatctgcactcaaaaatatgtttctgtt 84  Q
    ||||||||| || ||||||||||||||||||||| || | || ||||||| ||||||   | ||||||||||||||||||    
T  14419497 ctgatacaatgtctatatttatagtaaaagtatcactcataaattggaacaaaatctcagcccaaaaatatgtttctgtt 14419576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 23179858 - 23179925
Alignment:
Q  5 tctgatacaaggtttatatttatagta-aaagtatcgcttaaaatttggaacaaatctgcactcaaaa 71  Q
    |||||||||||  |||||||||||||  |||||||| |||||||| |||||||||||| |||| ||||    
T  23179858 tctgatacaagacttatatttatagtggaaagtatctcttaaaatatggaacaaatcttcactgaaaa 23179925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 13858788 - 13858842
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaa 58  Q
    ||||||||||| || ||||||||||||||||||||| || | || ||||||||||    
T  13858788 ctctgatacaaagtctatatttatagtaaaagtatccctcataaattggaacaaa 13858842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 15809244 - 15809190
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  15809244 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 15809190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 24873493 - 24873547
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  24873493 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 24873547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 28283531 - 28283585
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  28283531 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 28283585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 32339334 - 32339280
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  32339334 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 32339280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 43081987 - 43081930
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  43081987 ctgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43081930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22684967 - 22685003
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  22684967 ttgctctgatacaaggtctatatttatagtgaaagta 22685003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 43079614 - 43079558
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  43079614 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 4e-97; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 16776136 - 16775897
Alignment:
Q  1 ttgctctgatacaaggtttatattt-atagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcac 99  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |    
T  16776136 ttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttggaacaaatcttcactcaaaaatatgtttctgtttttcgatgccagcgc 16776037  T
Q  100 accatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||  ||  ||||||    
T  16776036 accatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcctcaaacttgaaacctccaatcgtgtcacgttgccttgccatcgtgc 16775937  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  16775936 cacgattcctgcagatcctgattttaagttaattctcaca 16775897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 38882083 - 38881845
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||| ||    
T  38882083 ttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgca 38881984  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgc 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  | |||||||| ||||||||||||||||||||| ||||||    
T  38881983 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactaaaacctcc-atcgtgccacgttgcccagcaatcgtgc 38881885  T
Q  200 cacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38881884 cacgattcctgcagatcttgattttaagttaactctcaca 38881845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 4236607 - 4236374
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||| ||    
T  4236607 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa-tacgtttctgtttttccctgccagcgca 4236509  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||  |||||||    
T  4236508 ccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgcc 4236409  T
Q  201 acgattcctgcagatct-tgattttaagttaactct 235  Q
    || ||| |||||||  | ||||||||||||||||||    
T  4236408 acaatt-ctgcagaaatctgattttaagttaactct 4236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 21948002 - 21947769
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||   |||||||    
T  21948002 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgctgc---cacacca 21947906  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||||| ||| | ||||||||||||||     |||||||  || |||||||  ||||||||||||||||| ||||||||| |||  ||||||||||    
T  21947905 tcgtgccacgttgcaatcccatcgtgccacgtaaagtccagtgacttacctcaaaactgaaacctccaatcgtgtcacgttgcctagccatcgtgccacg 21947806  T
Q  204 attcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||| ||||||| | |||||||||||||||||||||||    
T  21947805 atttctgcagaacctgattttaagttaactctcacaa 21947769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 21684767 - 21684908
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatc 105  Q
    |||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21684767 ctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatc 21684866  T
Q  106 gtgccacgatgcgaccccatcgtgccacgatttttccagtgc 147  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21684867 gtgccacgatgcgaccccatcgtgccacgatttttccagtgc 21684908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 20507766 - 20508001
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||| | ||||||||||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||| |||||||| ||| ||||     
T  20507766 ctctgatacaagatctatatttatagtaaaagtatcgcttaaatcttggaacaaatctgctcccaaaaatatgtttctgttattcgctgctagcgcacct 20507865  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    |||||||| | ||| | |||||||||||||||    |||| ||  ||||||||||  | |||||||||||||||| |||||||||| |  ||||||||||    
T  20507866 tcgtgccatgttgcaatcccatcgtgccacgaaaaatccaatgacttgcctcaaaactaaaacctccaatcgtgctacgttgcccaactatcgtgccacg 20507965  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    ||| ||||||| | ||||||||||||||||||||||    
T  20507966 atttctgcagaacctgattttaagttaactctcaca 20508001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 34477438 - 34477633
Alignment:
Q  44 aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 143  Q
    ||||| || ||||||||||||| ||||||||||||| | |||||  | |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34477438 aaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 34477536  T
Q  144 gtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |||| ||||||  |||  | |||||||| ||||||||||||||||||||  ||||||||||||| |||||| | |||||||||||||||||||||||||    
T  34477537 gtgccttgcctaaaaaactaaaacctcc-atcgtgccacgttgcccagccatcgtgccacgatt-ctgcagaaacttgattttaagttaactctcacaa 34477633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 2174897 - 2174783
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  2174897 ttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagtgca 2174798  T
Q  101 ccatcgtgccacgat 115  Q
    |||||||||||||||    
T  2174797 ccatcgtgccacgat 2174783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25921774 - 25921888
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||| ||    
T  25921774 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgtcagcgca 25921873  T
Q  101 ccatcgtgccacgat 115  Q
    |||||||||||||||    
T  25921874 ccatcgtgccacgat 25921888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 31544997 - 31544797
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    ||||||||| || || |||||||||| |||||||||||||||||||||  | |||||| |||||||||| | ||||| ||||||||||||||||||||||    
T  31544997 gcttaaaatctgtaataaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttt 31544898  T
Q  140 tccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctca 237  Q
    |||||||| ||| ||  |||  | |||||||| ||||||||||||||||||||  |||||||||||||  ||||| | | ||||||||||||||||||||    
T  31544897 tccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtgccacgatt-ttgcagaaacctgattttaagttaactctca 31544800  T
Q  238 caa 240  Q
    |||    
T  31544799 caa 31544797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 39798063 - 39797956
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  39798063 ctctaatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcacca 39797964  T
Q  104 tcgtgcca 111  Q
    ||||||||    
T  39797963 tcgtgcca 39797956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 659829 - 659712
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgat 221  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||| ||||||| | ||||    
T  659829 ccatcgtgccacgatttttccagtgacttgcctcaaact-gaaacctccaatcgtgccacgttgcctagccatcgtgccacgatttctgcagaacctgat 659731  T
Q  222 tttaagttaactctcacaa 240  Q
    |||||||||||||||||||    
T  659730 tttaagttaactctcacaa 659712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 31542628 - 31542442
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||||| |||||||||||||||||||||  | |||||| |||||||||| | ||||| |||||||||||||||||||||||||||||| |||     
T  31542628 aacaaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgccttgc 31542529  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| ||||||||||||||||||||  ||||| |||||||  ||||| | | ||||||||||||||||||||||    
T  31542528 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtgtcacgatt-ttgcagaaacctgattttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 12556227 - 12556337
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||| || ||||||||  |||||||| |||||||||||| || ||    
T  12556227 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaacaaatctgtacacaaaaatacatttctgttattcgctgccagcgcatca 12556326  T
Q  104 tcgtgccacga 114  Q
    |||||||||||    
T  12556327 tcgtgccacga 12556337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 36402632 - 36402741
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||| ||||| | |||||    
T  36402632 ctctgatataaggtctatatttatagtaaaagtatcgcttaaaattt-gaacaaatctgcacccaaaaatacgtttctgttattcgttgccaacgcacca 36402730  T
Q  104 tcgtgccacga 114  Q
    |||||||||||    
T  36402731 tcgtgccacga 36402741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 15354880 - 15355066
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  15354880 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 15354978  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  15354979 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 15355066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 15357156 - 15357342
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  15357156 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 15357254  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  15357255 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 15357342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 10749690 - 10749505
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  10749690 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 10749592  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | ||||||||||||||||||||||    
T  10749591 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 2818640 - 2818731
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgcca 95  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| |||| ||||||||||    
T  2818640 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccgaaaatacgtttttgttattcgctgcca 2818731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 10757145 - 10756959
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  10757145 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 10757047  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||| ||||||  ||||| | | |||||||||||||||||||||||    
T  10757046 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgctacgatt-gtgcagaaacctgattttaagttaactctcacaa 10756959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 20504316 - 20504453
Alignment:
Q  103 atcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccac 202  Q
    ||||||||||| ||| | |||||||||||||||    |||| ||  ||||||||||  | |||||||||||||||||||||||||||||  |||||||||    
T  20504316 atcgtgccacgttgcaatcccatcgtgccacgaaaaatccattgacttgcctcaaaactaaaacctccaatcgtgccacgttgcccagctatcgtgccac 20504415  T
Q  203 gattcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||| ||||||| | |||||||||||||||||||||||    
T  20504416 gatttctgcagaacctgattttaagttaactctcacaa 20504453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 6756466 - 6756359
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||| | |||||| |||||||||||||  |||||||||||||| ||||||||||  ||||||| ||||||||| |||||||||||| ||||||||    
T  6756466 tgatacaagatctatattaatagtaaaagtataacttaaaatttggaataaatctgcaccaaaaaatacgtttctgttattcgctgccagcgcaccatcg 6756367  T
Q  107 tgccacga 114  Q
    ||||||||    
T  6756366 tgccacga 6756359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 31466283 - 31466497
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||  ||| || | ||| |||||||  ||||||    
T  31466283 tctgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgcacccaaaaatacatttatggtattccctgccagtgcaccat 31466382  T
Q  105 cgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacga 204  Q
    ||||                     ||| |||||||||||||  |||||||| |  |||||| ||  |||||||||||||||||  || |||||||||||    
T  31466383 cgtg---------------------ccaagatttttccagtgacttgcctcataactgaaacatctcatcgtgccacgttgcccttcaatcgtgccacga 31466461  T
Q  205 ttcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||||| | | |||||||||||||||||||||||    
T  31466462 ttcctgcaaaacctgattttaagttaactctcacaa 31466497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 23667294 - 23667108
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg-ctttg 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||     
T  23667294 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttc 23667196  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | ||| |||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  23667195 ccaaaaaaataaaaactcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 23667108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 23665019 - 23664834
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg-ctttg 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||     
T  23665019 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttc 23664921  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | ||| |||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | ||||||||||||||||||||||    
T  23664920 ccaaaaaaataaaaactcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 23664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 23793568 - 23793753
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg-ctttg 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||     
T  23793568 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttc 23793666  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | ||| |||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | ||||||||||||||||||||||    
T  23793667 ccaaaaaaataaaaactcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 23793753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 659850 - 659929
Alignment:
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgtt 184  Q
    ||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  659850 tcgtgccacaatgcgacctcatcgtgccacgatttttccagtgacttgcctcaaac-tgaaacctccaatcgtgccacgtt 659929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 34479855 - 34479973
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttg 219  Q
    |||||||||||||||||||||||||| ||||||  |||  | |||||||| ||||||||||||||||||||  ||||||||||||| |||||| | | ||    
T  34479855 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctcc-atcgtgccacgttgcccagccatcgtgccacgatt-ctgcagaaacctg 34479952  T
Q  220 attttaagttaactctcacaa 240  Q
    |||||||||||||||||||||    
T  34479953 attttaagttaactctcacaa 34479973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 18186497 - 18186587
Alignment:
Q  149 ttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||||||||||  |||||||||||||||||||||||||||||||  |||| |||||||| |||||| | ||||||||||||||||||||||||    
T  18186497 ttgcctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgatt-ctgcagaaacttgattttaagttaactctcaca 18186587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 12556325 - 12556442
Alignment:
Q  123 catcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgatt 222  Q
    |||||||||||||    |||||||  ||||||||||  ||||||||||||| |||||||||||||||||  |  |||||||||| ||||||| | |||||    
T  12556325 catcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaattgtgccacgttgcccagccattatgccacgatttctgcagaacctgatt 12556424  T
Q  223 ttaagttaactctcacaa 240  Q
    |||| |||||||||||||    
T  12556425 ttaaattaactctcacaa 12556442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 25921874 - 25921992
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctc--aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atctt 218  Q
    |||||||||||||||||||||||||| |||||||  |||  |||||||||| |||||||||||||| ||| |  ||||||||||||| |||||| | | |    
T  25921874 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgtccaaccatcgtgccacgatt-ctgcagaaacct 25921971  T
Q  219 gattttaagttaactctcaca 239  Q
    |||||||||||||||||||||    
T  25921972 gattttaagttaactctcaca 25921992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 146
Target Start/End: Original strand, 31179769 - 31179861
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  31179769 aacaaatctgctcccaaaaatacgttt-tatttttacccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 31179861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 2174797 - 2174680
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttg 219  Q
    |||||||||||||||||||||||||| ||||||  |||  |||||||||| ||||||||||||||||  ||  ||||||||||||| |||||| | | ||    
T  2174797 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgatt-ctgcagaaacctg 2174700  T
Q  220 attttaagttaactctcaca 239  Q
    ||||||||||||||||||||    
T  2174699 attttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 2818729 - 2818847
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgat 221  Q
    ||||||||||||||    |||||||  ||||||||||  |||||||||||||||||||| |||||| |||  ||||||||||||| ||||||| | | ||    
T  2818729 ccatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccatgttgcctagccatcgtgccacgatttctgcagaacctaat 2818828  T
Q  222 tttaag-ttaactctcaca 239  Q
    |||||| ||||||||||||    
T  2818829 tttaagtttaactctcaca 2818847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 39797966 - 39797849
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttg 219  Q
    ||||||||||| ||||||||| |||| ||||||| |||  |||||||||| ||| ||||||||||||||||  |||||||||||||  ||||| | | ||    
T  39797966 ccatcgtgccatgatttttccggtgccttgcctcaaaaactgaaacctcc-atcatgccacgttgcccagccatcgtgccacgatt-atgcagaaacctg 39797869  T
Q  220 attttaagttaactctcaca 239  Q
    ||||||||||||||||||||    
T  39797868 attttaagttaactctcaca 39797849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 29748315 - 29748260
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatc 60  Q
    ||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||    
T  29748315 tctgatacaaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatc 29748260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31542713 - 31542651
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| |||||||||||||||||| | ||||||||| || |||||||||||    
T  31542713 ttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 31542651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 21684905 - 21684972
Alignment:
Q  175 gtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaaca 242  Q
    |||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||||||||||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaaca 21684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4410035 - 4409890
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagt-atcgctt-aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagca 98  Q
    ||||||||||||||||| |||||||||||| ||||| ||| ||| ||||  || ||||||||| || | ||||||| |||| | |||||  |||||| |     
T  4410035 ttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcaat-aaaaatacgttt-tatttttatctgccatcg 4409938  T
Q  99 caccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    |||||||||| |||||| ||| || || ||| ||||||||||||||||    
T  4409937 caccatcgtggcacgattcgatccaattgtggcacgatttttccagtg 4409890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 2144897 - 2144954
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaa-atttggaacaaatct 61  Q
    ||||||||||||| ||||||||||||||||||||| || ||| | |||||||||||||    
T  2144897 tctgatacaaggtctatatttatagtaaaagtatccctcaaataattggaacaaatct 2144954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 6756354 - 6756257
Alignment:
Q  140 tccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctca 237  Q
    |||||||  |||||||||| |||||||||| |||||||||| |||  ||||   ||||||||||||| ||| ||| | ||||||||| ||||| ||||    
T  6756354 tccagtgacttgcctcaaagttgaaacctctaatcgtgccatgttatccaggcatcgtgccacgatttctgtagaacctgattttaaattaaccctca 6756257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 34479739 - 34479796
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||||||||||| ||| ||||||||||| || ||||||||||| || |||||||||||    
T  34479739 ctgatacaaggtctatttttatagtaaaggtctcgcttaaaatctgtaacaaatctgc 34479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3373342 - 3373401
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||| ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  3373342 ttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 3373401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 34479799 - 34479869
Alignment:
Q  44 aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgat 115  Q
    ||||| || ||||||||||||| ||||||||||||| | |||||  | |||||| |||||||||||||||||    
T  34479799 aaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgat 34479869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 39854462 - 39854317
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagt-atcgctt-aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagca 98  Q
    ||||||||||||||||| |||||||||||| ||||| ||| ||| ||||  || ||||||||| || | ||||||| |||| | |||||  || | | |     
T  39854462 ttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcaat-aaaaatacgttt-tatttttatcttcaatcg 39854365  T
Q  99 caccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    |||||||||||||||||||||  | | |||| ||||||||||||||||    
T  39854364 caccatcgtgccacgatgcgattcaaccgtgacacgatttttccagtg 39854317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 42770745 - 42770690
Alignment:
Q  8 gatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatctg 62  Q
    ||||||| |||||||||||||||||||||||| || | ||| ||||||||||||||    
T  42770745 gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaatctg 42770690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 10586812 - 10586758
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  10586812 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 10586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10757242 - 10757180
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  10757242 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 10757180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15354783 - 15354845
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  15354783 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 15354845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15357059 - 15357121
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  15357059 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 15357121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 15552208 - 15552154
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  15552208 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 15552154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23665116 - 23665054
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  23665116 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23665054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23793471 - 23793533
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  23793471 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23793533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 25803989 - 25803935
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  25803989 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 25803935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 27910418 - 27910364
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  27910418 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 27910364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 27912503 - 27912449
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  27912503 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 27912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 34477378 - 34477420
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaat 48  Q
    |||||||||||| ||| |||||||||||||| |||||||||||    
T  34477378 ctgatacaaggtctatttttatagtaaaagtctcgcttaaaat 34477420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38960343 - 38960405
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  38960343 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 38960405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 18468979 - 18468926
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  18468979 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 18468926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 25837991 - 25837906
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctg 92  Q
    |||||||| ||||| ||||||| |||||| ||| || |||| ||||||||||||   || |||||||| |||| ||||||| ||||    
T  25837991 tgatacaaagtttaaatttatattaaaagcatccctaaaaaattggaacaaatccagacccaaaaatacgtttatgttttttgctg 25837906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 661246 - 661286
Alignment:
Q  199 ccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||||| ||||||| | ||||||||||||||||||||||    
T  661246 ccacgatttctgcagaacctgattttaagttaactctcaca 661286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6745039 - 6745003
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  6745039 ttgctctgatacaaggtctatatttatagtgaaagta 6745003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6747282 - 6747246
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  6747282 ttgctctgatacaaggtctatatttatagtgaaagta 6747246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10529400 - 10529436
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  10529400 ttgctctgatacaaggtctatatttatagtgaaagta 10529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 2867 - 2628
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||| ||    
T  2867 ttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgca 2768  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||| ||||| |    
T  2767 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgcctcaaaactgaaacctccaatcgtgccacgttgcctagcaatcgtgtc 2668  T
Q  201 acgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    || |||||||||||||||||||||||||||||||||||||    
T  2667 acaattcctgcagatcttgattttaagttaactctcacaa 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 15530426 - 15530661
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |  ||| ||||||||||||||    
T  15530426 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaacctgcacccaaaaatatgtttctataattcactgccagcacacca 15530525  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    ||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||    
T  15530526 tcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttgcctcaaacttgaaacctccaattgtgccacgttacccagccatcgtgccacg 15530625  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15530626 attcctgcagatcctgattttaagttaactctcaca 15530661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19227709 - 19227949
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa-atatgtttctgtttttcgctgccagcac 99  Q
    ||||||||||||||| | |||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||| |    
T  19227709 ttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacccaaaaaatatgtttctgttattcgccgccagcgc 19227808  T
Q  100 accatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcagtcgtg 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||| |||||||||||||| |  |||||    
T  19227809 accatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaattgaaacctcc-atcatgccacgttgcccaaccatcgtg 19227907  T
Q  199 ccacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  19227908 ccacgattcctgcagatcttaattttaagttaactctcacaa 19227949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 8995489 - 8995255
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| || |||| |||| |||||    
T  8995489 ctctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttatttgctgtcagcgcacca 8995391  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||  |||  |||||||||||||||||||||||||||||||  ||||||||||    
T  8995390 tcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcccaaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacg 8995291  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||| |||||| ||||||||||||||||||||||    
T  8995290 attcctacagatcctgattttaagttaactctcaca 8995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 9019936 - 9019702
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| || |||| |||| |||||    
T  9019936 ctctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttatttgctgtcagcgcacca 9019838  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacg 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||  |||  |||||||||||||||||||||||||||||||  ||||||||||    
T  9019837 tcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcccaaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacg 9019738  T
Q  204 attcctgcagatcttgattttaagttaactctcaca 239  Q
    |||||| |||||| ||||||||||||||||||||||    
T  9019737 attcctacagatcctgattttaagttaactctcaca 9019702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 14507476 - 14507716
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||    
T  14507476 ttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctacactcaaaaatatgtttctgtttttcgctggcagcgca 14507575  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc---aaacttgaaacctccaatcgtgccacgttgcccagcagtcgt 197  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||  ||   |||  |||||||||| ||||||||||||||||||||  ||||    
T  14507576 ccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttgtatcaaaaaaactgaaacctcc-atcgtgccacgttgcccagccatcgt 14507674  T
Q  198 gccacgattcctgcagatct-tgattttaagttaactctcaca 239  Q
    ||||||||| |||||||  | ||||||||||||||||||||||    
T  14507675 gccacgatt-ctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 11983330 - 11983567
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11983330 ttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgca 11983429  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |  |||||||||| ||||| ||| |||||||| |  |||| ||    
T  11983430 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc-ttacctcacaactgaaacctcc-atcgtaccatgttgcccaaccatcgtacc 11983527  T
Q  201 acgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |||||| |||||| | | |||||||||||||||||| ||||    
T  11983528 acgatt-ctgcagaaacctgattttaagttaactcttacaa 11983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 4816612 - 4816749
Alignment:
Q  44 aaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 143  Q
    ||||| || |||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4816612 aaaatctgtaacaaatctgcaccaaaaaatatgtttctgttttt-gctaccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 4816710  T
Q  144 gtgctttgcctcaaacttgaaacctccaatcgtgccacg 182  Q
    || | ||||||||||  ||||||||||||||||||||||    
T  4816711 gtaccttgcctcaaaactgaaacctccaatcgtgccacg 4816749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 30729132 - 30729284
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||| |    
T  30729132 ctctgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcacta 30729231  T
Q  104 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctca 156  Q
    |||||||||| || |||||||||||| |||||  |||||||||  ||||||||    
T  30729232 tcgtgccacgttgtgaccccatcgtggcacgaaatttccagtgacttgcctca 30729284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 33308870 - 33308684
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  33308870 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 33308772  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||||||  ||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||    
T  33308771 ccaaaaaactaaaacctcc-atcgtgccacgaagcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 33308684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 33311139 - 33310953
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  33311139 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 33311041  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||||||  ||||||| |||||||||||||| |||||| | | |||||||||||||||||||||||    
T  33311040 ccaaaaaactaaaacctcc-atcgtgccacgaagcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 33310953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 15541445 - 15541586
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| |||||||||||||||||| |  |||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||  |||||    
T  15541445 tctgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaaatctgcacctaaaaatatgtttctgctattcgctgccagcgtaccat 15541544  T
Q  105 cgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    ||||||||| ||||| | ||||||| || ||  |||||||||    
T  15541545 cgtgccacgttgcgatctcatcgtggcatgaaatttccagtg 15541586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 32280004 - 32279897
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||| ||||| |||||| ||||||||    
T  32280004 tgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatacatttatgttattcgccgccagcgcaccatcg 32279905  T
Q  107 tgccacga 114  Q
    ||||||||    
T  32279904 tgccacga 32279897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 29755094 - 29755279
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  29755094 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 29755192  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | ||||||||||||||||||||||    
T  29755193 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 15532986 - 15533137
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||| || || ||| ||||| ||||||    
T  15532986 tctgatacaaggtctatatttatagtaaaagtataacttaaaatttggaacaaatctgcacctaaaaatatgtttctcttatttgctaccagcgcaccat 15533085  T
Q  105 cgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctca 156  Q
     ||| |||| ||||| | ||||||| ||| |  |||||||||  ||||||||    
T  15533086 tgtgacacgttgcgatctcatcgtggcacaaaatttccagtgacttgcctca 15533137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 1072181 - 1072291
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacacca 103  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| |||| |||||||||  |  ||||    
T  1072181 ctctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgcctacgtacca 1072280  T
Q  104 tcgtgccacga 114  Q
    |||||||||||    
T  1072281 tcgtgccacga 1072291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 26068697 - 26068882
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||     
T  26068697 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 26068795  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| ||| ||||||||||||  || |||||||||||||| |||||| | | ||||||||||||||||||||||    
T  26068796 ccaaaaaactaaaacctcc-atcatgccacgttgccttgccgtcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 26066426 - 26066612
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgc 152  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  26066426 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccattgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 26066524  T
Q  153 ctcaa-acttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    |  || |  | |||||||| ||||||||||||||||  || |||||||||||||| || ||| | | |||||||||||||||||||||||    
T  26066525 ccaaataactaaaacctcc-atcgtgccacgttgccttgccgtcgtgccacgatt-ctacagaaacctgattttaagttaactctcacaa 26066612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 32279910 - 32279794
Alignment:
Q  122 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgat 221  Q
    |||||||||||||| |||||||| |  |||||||| |  |||||| |||||||||||||||||||||| || ||||| |||| |||||||||| | ||||    
T  32279910 ccatcgtgccacgacttttccagcgacttgcctcagaactgaaacatccaatcgtgccacgttgcccaacaatcgtgtcacgtttcctgcagaac-tgat 32279812  T
Q  222 tttaagttaactctcaca 239  Q
    ||||||||||||||||||    
T  32279811 tttaagttaactctcaca 32279794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 24192630 - 24192733
Alignment:
Q  35 gtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacg 134  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| | ||||| ||||||  ||| | ||||||||| ||||    
T  24192630 gtattgcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcatgccacattgcaatcccatcgtggcacg 24192729  T
Q  135 attt 138  Q
    ||||    
T  24192730 attt 24192733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 24191533 - 24191636
Alignment:
Q  35 gtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacg 134  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| | ||||| | ||||  ||| | ||||||||| ||||    
T  24191533 gtattgcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcataccacattgcaatcccatcgtggcacg 24191632  T
Q  135 attt 138  Q
    ||||    
T  24191633 attt 24191636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 1072305 - 1072395
Alignment:
Q  149 ttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||||||||  | ||||||||||||||||||||||||||| |  |||| |||||||| ||||||| | ||||||||||||||||||||||    
T  1072305 ttgcctcaaaacttaaacctccaatcgtgccacgttgcccaaccatcgtaccacgatttctgcagaacctgattttaagttaactctcaca 1072395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 12186376 - 12186431
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagt-atcgcttaaaatttggaacaaatct 61  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  12186376 tgatacaaggtttatatttatagtaaaagtaatcgctaaaaaattggaacaaatct 12186431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 4816551 - 4816608
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||||||||||| |||||||||||||||||| | ||||||||| || |||||||||||    
T  4816551 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 4816608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 20915664 - 20915721
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||||||||||| |||||||||||||||||| | ||||||||| || |||||||||||    
T  20915664 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 20915721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 16455732 - 16455786
Alignment:
Q  8 gatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctg 62  Q
    |||||||||| ||||||||||||||| ||||| || |||| ||||||||||||||    
T  16455732 gatacaaggtatatatttatagtaaaggtatccctgaaaaattggaacaaatctg 16455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26068600 - 26068662
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  26068600 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 26068662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26066329 - 26066389
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| || |||||||||    
T  26066329 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 26066389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12195816 - 12195875
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||| ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  12195816 ttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 12195875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 12911770 - 12911837
Alignment:
Q  19 tatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttt 86  Q
    ||||||||||||||||||||| || ||||||||||| ||||||   | |||||||| | |||||||||    
T  12911770 tatatttatagtaaaagtatccctaaaaatttggaataaatctaagcacaaaaatacgattctgtttt 12911837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 15346399 - 15346320
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaac-aaatctgcactcaaaaatatgtttctgtt 84  Q
    ||||||||| || ||||||||||||||||||||| || | || ||||||| ||||||   |||||||||| |||||||||    
T  15346399 ctgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaaatctcagctcaaaaatacgtttctgtt 15346320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 26084865 - 26084818
Alignment:
Q  99 caccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 146  Q
    |||||||||||||||||||||  | |||||| ||||||||||||||||    
T  26084865 caccatcgtgccacgatgcgattcaatcgtggcacgatttttccagtg 26084818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 12937517 - 12937559
Alignment:
Q  19 tatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||||||||||||||||||| || ||||||||||| ||||||    
T  12937517 tatatttatagtaaaagtatccctaaaaatttggaataaatct 12937559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 15533175 - 15533221
Alignment:
Q  194 tcgtgccacgattcctgcagatcttgattttaagttaactctcacaa 240  Q
    ||||| ||||||| ||| ||||| |||||||||||||||||||||||    
T  15533175 tcgtggcacgatttctgtagatcctgattttaagttaactctcacaa 15533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29754997 - 29755059
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  29754997 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 29755059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 30034913 - 30034967
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    |||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  30034913 ctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaat 30034967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 2629197 - 2629250
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaat 59  Q
    ||||||||||| ||||||||||||||||||||  || | |||||||||||||||    
T  2629197 tgatacaaggtctatatttatagtaaaagtataactaataaatttggaacaaat 2629250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 15367045 - 15366992
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaa 58  Q
    |||||||||| || ||||||||||||||||||||| || | || ||||||||||    
T  15367045 tctgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaa 15366992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 15541634 - 15541679
Alignment:
Q  194 tcgtgccacgattcctgcagatcttgattttaagttaactctcaca 239  Q
    ||||| ||||||| ||||| ||| ||||||||||||||||||||||    
T  15541634 tcgtggcacgatttctgcaaatcctgattttaagttaactctcaca 15541679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 26945156 - 26945127
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaag 35  Q
    ||||||||||||||||||||||||||||||    
T  26945156 ctgatacaaggtttatatttatagtaaaag 26945127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 33308966 - 33308905
Alignment:
Q  2 tgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  33308966 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33308905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 33311235 - 33311174
Alignment:
Q  2 tgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    |||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  33311235 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33311174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 3028157 - 3028189
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatc 39  Q
    ||||||||||| |||||||||||||||||||||    
T  3028157 tgatacaaggtctatatttatagtaaaagtatc 3028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 19696446 - 19696394
Alignment:
Q  9 atacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatct 61  Q
    ||||||||| ||||||||||||||||| |||  | |||| |||||||||||||    
T  19696446 atacaaggtctatatttatagtaaaagaatccttcaaaaattggaacaaatct 19696394  T

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Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28241622 - 28241658
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  28241622 ttgctctgatacaaggtctatatttatagtgaaagta 28241658  T

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Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 33215712 - 33215630
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgc--ttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttt 86  Q
    ||||| |||||| ||||||||||||| |||||| | |  |||||| ||||||||||||| ||||  |||||| |||||||||||    
T  33215712 tctgacacaaggcttatatttatagtgaaagtaacccctttaaaaattggaacaaatcttcact-gaaaatacgtttctgtttt 33215630  T

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Target: scaffold0025 (Bit Score: 161; Significance: 9e-86; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 69596 - 69834
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  69596 ttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa-tatgtttctgtttttcgctgccagcaca 69694  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    ||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  69695 ccatcgtgcaacgatgcgatcccattgtgctacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagccatcgtgcc 69794  T
Q  201 acgattcctgcagatct-tgattttaagttaactctcacaa 240  Q
    |||||| |||||||  | |||||||||||||||||| ||||    
T  69795 acgatt-ctgcagaaatctgattttaagttaactcttacaa 69834  T

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Target: scaffold0025; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 73334 - 73545
Alignment:
Q  7 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcg 106  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  73334 tgatacacggtctatatttatagtaaaagtatctcttaaaatttggaacaaatctgcac-ccaaaatatgtttctgtttttcgctgccagcacaccatcg 73432  T
Q  107 tgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgatt 206  Q
    |||                     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  73433 tgc---------------------cacaatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatt 73511  T
Q  207 cctgcagatct-tgattttaagttaactctcacaa 240  Q
     ||||| |  | |||||||||||||||||| ||||    
T  73512 -ctgcataaatctgattttaagttaactcttacaa 73545  T

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Target: scaffold0131 (Bit Score: 143; Significance: 5e-75; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 15006 - 14768
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcaca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||    
T  15006 ttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgca 14907  T
Q  101 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgcc 200  Q
    |||||||| |||| || || |||||||||||||||  |||||||||  |||||||| |  |||||| ||| ||||| |||||||||||  || |||||||    
T  14906 ccatcgtgtcacgttgtgatcccatcgtgccacgaaatttccagtgacttgcctcataactgaaacttcccatcgttccacgttgcccttcaatcgtgcc 14807  T
Q  201 acgattcctgcag-atcttgattttaagttaactctcac 238  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  14806 acgattcctgcagaatcctgattttaagttaactctcac 14768  T

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Target: scaffold0068 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 29143 - 29002
Alignment:
Q  6 ctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatc 105  Q
    |||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29143 ctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatc 29044  T
Q  106 gtgccacgatgcgaccccatcgtgccacgatttttccagtgc 147  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29043 gtgccacgatgcgaccccatcgtgccacgatttttccagtgc 29002  T

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Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 29005 - 28938
Alignment:
Q  175 gtgccacgttgcccagcagtcgtgccacgattcctgcagat-cttgattttaagttaactctcacaaca 242  Q
    |||||||||||||||||  |||||||||||||| ||||||  | |||||||||||||||||||||||||    
T  29005 gtgccacgttgcccagccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaaca 28938  T

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Target: scaffold0339 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 3980 - 3872
Alignment:
Q  5 tctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccat 104  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||| |||| |||||||||| | ||||||    
T  3980 tctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaaaatacgtttatgttattcgctgccatcgcaccat 3881  T
Q  105 cgtgccacg 113  Q
    |||||||||    
T  3880 cgtgccacg 3872  T

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Target: scaffold0472 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 6125 - 5927
Alignment:
Q  40 gcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttt 139  Q
    |||| ||||||| ||||||||||||| ||||||||||||| | |||||  | |||||| ||||||||||||| |||| ||||||||| ||||||||||||    
T  6125 gctttaaatttgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccatgatgagaccccatcatgccacgatttt 6027  T
Q  140 tccagtgctttgcct-caaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctca 237  Q
    |||||||| ||||||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | ||||||||||||||||||||    
T  6026 tccagtgccttgcctaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctca 5929  T

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Target: scaffold0140 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 22100 - 21914
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  22100 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 22002  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  22001 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 21914  T

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Target: scaffold0140; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 24375 - 24189
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | ||||||||||||| | |||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  24375 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 24277  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 240  Q
    ||  |||  | |||||||| |||||||| ||  ||||||| ||||||||||||||  ||||| | | |||||||||||||||||||||||    
T  24276 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 24189  T

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Target: scaffold0140; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22197 - 22135
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  22197 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24472 - 24410
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 63  Q
    ||||| ||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||    
T  24472 ttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 24410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 12869 - 13054
Alignment:
Q  53 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 151  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||     
T  12869 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 12967  T
Q  152 cctcaaacttgaaacctccaatcgtgccacgttgcccagcagtcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 239  Q
    ||  |||  | |||||||| ||||||||||||||||  |   ||||||||||||| |||||| | | ||||||||||||||||||||||    
T  12968 ccaaaaaactaaaacctcc-atcgtgccacgttgccttgacatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 13054  T

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Target: scaffold0224 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16122 - 16180
Alignment:
Q  4 ctctgatacaaggtttatatttatagtaaaagtatcgctta-aaatttggaacaaatct 61  Q
    |||||||||||  | ||||||||||||||||||||| || | |||||||||||||||||    
T  16122 ctctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatct 16180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1132 - 1168
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  1132 ttgctctgatacaaggtctatatttatagtgaaagta 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41784 - 41820
Alignment:
Q  1 ttgctctgatacaaggtttatatttatagtaaaagta 37  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  41784 ttgctctgatacaaggtctatatttatagtgaaagta 41820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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