View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15629_high_27 (Length: 319)
Name: NF15629_high_27
Description: NF15629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15629_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 27 - 299
Target Start/End: Original strand, 5690646 - 5690918
Alignment:
| Q |
27 |
atatttgaagcctataatctctgtagctgtctgtgaactttcttgctaggcctagaaccaccatcacttcaccccttcgttctcattctcatacacaccc |
126 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
5690646 |
atatttgaagcctataatctctgtacctgtctgtgaactttcttgctaggcctagaaccaccatcacttcacccctttgttctcattctcatacacaccc |
5690745 |
T |
|
| Q |
127 |
aagccaccactcaattcgccaaaaataacaccaacacaatcacctcatttaccaggagtttctttcaatctcaacaacacaaccacccacccacaagatt |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5690746 |
aagccaccactcaattcgccaaaaataacaccaacacaatcacctcatttaccaggagtttctttcaatctcaacaacacaaccacccacccacaagatt |
5690845 |
T |
|
| Q |
227 |
gccatctttatttaacatacctcaaactataatccacatgtaacctctcattcttcaacaatgtgatgatgtc |
299 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5690846 |
gcccactttatttaacatacctcaaactataatccacatgtaacctctcattcttcaacaatgtgatgatgtc |
5690918 |
T |
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