View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15632_high_14 (Length: 366)
Name: NF15632_high_14
Description: NF15632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15632_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 30 - 345
Target Start/End: Complemental strand, 26936 - 26621
Alignment:
| Q |
30 |
atatctaccttagacaccaattaagatcaaatttagtttatgcttgagnnnnnnnagcagttaactgaagtttcttagttacatcgtatacctaatagct |
129 |
Q |
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| T |
26936 |
atatctaccttagacaccaattaagatcaaatttagtttatgcttgagtttttttagcagttaactgaagtttcttagttacatcgtataactaatagct |
26837 |
T |
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| Q |
130 |
aattatttatattatgcactatgtttaccttgttgaatgcaattcttcagtttgttttcagnnnnnnngcaaattgattcttcaaaattcagttcaagat |
229 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26836 |
aattatttatattatgcactatgtttactttgttgaatgcaattcttcagtttgttttcagaaaaaaagcaaattgattcttcaaaattcagttcaagat |
26737 |
T |
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| Q |
230 |
accgcaggctcaaaagtatcatgtagtttactgaatgtggaaagtgtgatagatgatgatgcatgtgaattagtcagtggagaggagctttcattagagg |
329 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
26736 |
actgcaggctcaaaagtatcatgtagtttactgaatgtggaaagtgtgatagatgatgatgcatgtgaattagtcagtggagaggagctttcgttagagg |
26637 |
T |
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| Q |
330 |
atggcgatgatgatgt |
345 |
Q |
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||||||||||| |||| |
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| T |
26636 |
atggcgatgataatgt |
26621 |
T |
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