View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15632_high_18 (Length: 343)
Name: NF15632_high_18
Description: NF15632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15632_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 24 - 314
Target Start/End: Complemental strand, 48965984 - 48965695
Alignment:
| Q |
24 |
catcaggttgctatatgattttagaaaagaagagctccatggaagccaattataaccatttggcctcacatcacagtttgttgctcttacgaaagagcac |
123 |
Q |
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| T |
48965984 |
catcaggttgctatatgattttagaaaagaagagctccatggaagccaattataaccatttggcctcacatcacagtttgttgctcttaagaaagagcac |
48965885 |
T |
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| Q |
124 |
caggcattgctgctattgctggttcttaaattagactaattaacattcattatcagtgtttgtgatttttgttttagtaaacagatgcaatgttgaatga |
223 |
Q |
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| T |
48965884 |
caggcattgctgctattgctggttcttaaattatactaattaacattcattattagtgtttgtgattttctttttagtaaacagatgcaatgttgaatga |
48965785 |
T |
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| Q |
224 |
tcaaatgcaaaagccaacaaaacaatgatgcaaacatcatatgtagtgaatcagaaaatgtagaaaggtcagatcacatgtgtggtgtgtt |
314 |
Q |
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| T |
48965784 |
tccaatgc-aaagccaacaaaacaatgtagcaaacatcatatgtagttaatcagaaaatgtagaaaggtcagatcacatgtgtggtttgtt |
48965695 |
T |
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