View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15632_high_23 (Length: 338)
Name: NF15632_high_23
Description: NF15632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15632_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 44006892 - 44006584
Alignment:
| Q |
1 |
tcaaagctttcgacttctgatttgggacttttggttttggaaggaagtgtgggacttttggtttcggaaggaagtgaaatgacatagtttttgggcaagg |
100 |
Q |
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| T |
44006892 |
tcaaagctttcgacttctgatttgggacttttggttttggaaggaagtgtgggacttttggtttcggaaggaagtgaaatgacatagtttttgggcaagg |
44006793 |
T |
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| Q |
101 |
aattggttttcaaaaaaggtgcaagagattcatggttattctttgagaattgaagtatgtgattcttcacttgtgatccgaaaattatatttttccttgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
44006792 |
aattggttttcaaaaaaggtgcaagagattcatggttattctttgagaattgaagtatgtgattcttcacttgtgatccaaaaattatatttttccttgg |
44006693 |
T |
|
| Q |
201 |
aaatttaccaaggatctcgctattaggtttggtttcattaacaagagaagttatgataccaaggcctactttacttccatctaacggcttcttattctcg |
300 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44006692 |
aaatttaccaaggatctcgttattaggtttggtttcattaacaagagaagttatgataccaaggcctactttacttccatctaacggcttcttattctcg |
44006593 |
T |
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| Q |
301 |
gtttggaat |
309 |
Q |
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||||||||| |
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| T |
44006592 |
gtttggaat |
44006584 |
T |
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