View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15632_high_27 (Length: 329)
Name: NF15632_high_27
Description: NF15632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15632_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 31 - 306
Target Start/End: Original strand, 40284760 - 40285055
Alignment:
| Q |
31 |
acctcaccctttacctggctttgtattctctttggtgtgatcaaactttctaaaaaccatattaggtacaaggatggagcaatagacgaacattacctat |
130 |
Q |
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| T |
40284760 |
acctcaccctttacctggctttgtattctctttggtgtgatcaaactttctaaaaaccatgtaaggtacaaggatggagcaatagacgaacattacctat |
40284859 |
T |
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| Q |
131 |
gatcttgacctaaaaacgcagatgacatgcttatct--------------------taaatataaaacatttcctgtcaccatgcttgcaacaaatagca |
210 |
Q |
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| T |
40284860 |
gatcttgacctaaaaacgcagatgacatgcttatcttatcttatcttagagtccaataaatataaaacattttctgtcaccatgcttgcaacaaatagca |
40284959 |
T |
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| Q |
211 |
agttaaccaagttacaatttaaaaaatattcaaactcctccctaaagaatataggcataagcacaaaaaatggccaaaaataaatttgctgatgat |
306 |
Q |
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||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
40284960 |
agttaaccaagttacaatttaaaaaatattcaatctccttcctaaagaatataggcataagcacaaaaaatgtccaaaaataaatttgctgatgat |
40285055 |
T |
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