View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15634_high_5 (Length: 367)

Name: NF15634_high_5
Description: NF15634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15634_high_5
NF15634_high_5
[»] chr8 (63 HSPs)
chr8 (13-231)||(35168439-35168657)
chr8 (228-366)||(35168256-35168395)
chr8 (158-231)||(32975702-32975775)
chr8 (158-231)||(34286562-34286634)
chr8 (165-231)||(10298924-10298990)
chr8 (158-224)||(28879073-28879139)
chr8 (158-221)||(35453425-35453488)
chr8 (158-229)||(38895674-38895745)
chr8 (158-231)||(16972354-16972428)
chr8 (132-231)||(19327857-19327954)
chr8 (161-231)||(24350517-24350587)
chr8 (158-231)||(12607095-12607167)
chr8 (158-231)||(32131455-32131528)
chr8 (158-231)||(35285943-35286016)
chr8 (158-231)||(42363315-42363387)
chr8 (160-231)||(9131126-9131197)
chr8 (166-231)||(8216901-8216967)
chr8 (158-208)||(32213043-32213093)
chr8 (158-231)||(11988212-11988284)
chr8 (158-231)||(14709535-14709607)
chr8 (158-231)||(14942439-14942512)
chr8 (158-231)||(19925572-19925645)
chr8 (158-231)||(37410911-37410983)
chr8 (158-231)||(42102122-42102194)
chr8 (158-206)||(13265499-13265547)
chr8 (128-231)||(34102684-34102787)
chr8 (158-231)||(13131445-13131527)
chr8 (169-231)||(24866949-24867011)
chr8 (158-211)||(1089028-1089081)
chr8 (158-227)||(2669663-2669732)
chr8 (228-269)||(18396909-18396950)
chr8 (167-224)||(23412758-23412815)
chr8 (162-210)||(24087189-24087237)
chr8 (158-222)||(28280724-28280788)
chr8 (158-228)||(8752821-8752891)
chr8 (158-231)||(32924210-32924283)
chr8 (158-231)||(38195502-38195574)
chr8 (233-265)||(10298833-10298865)
chr8 (228-267)||(11461255-11461294)
chr8 (184-231)||(25333730-25333776)
chr8 (144-211)||(26046974-26047040)
chr8 (158-225)||(38338855-38338921)
chr8 (158-212)||(41145412-41145469)
chr8 (132-231)||(45548143-45548241)
chr8 (158-212)||(2289903-2289957)
chr8 (233-263)||(10480026-10480056)
chr8 (166-212)||(16706117-16706163)
chr8 (160-231)||(29218249-29218322)
chr8 (196-226)||(29713237-29713267)
chr8 (228-266)||(34286635-34286673)
chr8 (166-231)||(218252-218315)
chr8 (166-231)||(694812-694875)
chr8 (166-231)||(699021-699084)
chr8 (166-231)||(731875-731938)
chr8 (166-231)||(855771-855834)
chr8 (170-231)||(2563385-2563446)
chr8 (170-231)||(14262353-14262414)
chr8 (228-265)||(28879035-28879072)
chr8 (158-231)||(31079164-31079237)
chr8 (158-210)||(4326232-4326284)
chr8 (233-265)||(11460796-11460828)
chr8 (229-261)||(14942391-14942423)
chr8 (158-210)||(29243083-29243134)
[»] chr1 (82 HSPs)
chr1 (158-231)||(6337754-6337827)
chr1 (158-231)||(15515345-15515418)
chr1 (158-230)||(26988163-26988235)
chr1 (161-231)||(3069852-3069922)
chr1 (157-231)||(41196708-41196782)
chr1 (158-231)||(4068130-4068203)
chr1 (158-231)||(16888964-16889036)
chr1 (158-231)||(37329410-37329483)
chr1 (158-231)||(35590145-35590218)
chr1 (158-227)||(48819314-48819383)
chr1 (160-231)||(28690021-28690092)
chr1 (158-231)||(18327539-18327612)
chr1 (159-228)||(37712084-37712152)
chr1 (158-231)||(26946102-26946176)
chr1 (158-231)||(1005355-1005428)
chr1 (158-231)||(31378749-31378822)
chr1 (171-227)||(23544819-23544875)
chr1 (158-225)||(13038962-13039029)
chr1 (158-231)||(45267480-45267554)
chr1 (158-231)||(17628423-17628495)
chr1 (158-231)||(32497270-32497342)
chr1 (158-231)||(46500999-46501072)
chr1 (158-225)||(9572788-9572856)
chr1 (158-225)||(36422985-36423052)
chr1 (173-231)||(39658321-39658379)
chr1 (158-231)||(5243402-5243474)
chr1 (158-231)||(15631919-15631992)
chr1 (158-231)||(20169279-20169352)
chr1 (166-227)||(26435177-26435238)
chr1 (158-227)||(42591397-42591466)
chr1 (158-231)||(47413388-47413460)
chr1 (162-210)||(1565401-1565449)
chr1 (158-210)||(10850090-10850142)
chr1 (167-231)||(49971275-49971339)
chr1 (159-209)||(10365187-10365237)
chr1 (165-211)||(39941463-39941509)
chr1 (166-212)||(39941533-39941579)
chr1 (173-231)||(50919517-50919575)
chr1 (154-207)||(1265715-1265768)
chr1 (158-231)||(15791399-15791471)
chr1 (166-231)||(22593405-22593470)
chr1 (158-231)||(35282592-35282665)
chr1 (166-231)||(41130017-41130082)
chr1 (158-231)||(51162284-51162357)
chr1 (158-210)||(10082265-10082317)
chr1 (158-231)||(19284911-19284986)
chr1 (174-229)||(18317032-18317087)
chr1 (166-225)||(39941605-39941664)
chr1 (158-225)||(46473109-46473176)
chr1 (166-232)||(5610531-5610597)
chr1 (153-231)||(19220184-19220261)
chr1 (166-212)||(39941393-39941438)
chr1 (166-231)||(25485771-25485836)
chr1 (158-231)||(28122631-28122704)
chr1 (133-206)||(35897646-35897718)
chr1 (166-231)||(36259289-36259354)
chr1 (229-266)||(41196615-41196652)
chr1 (187-231)||(1683899-1683943)
chr1 (195-231)||(14461039-14461075)
chr1 (158-209)||(41003402-41003454)
chr1 (192-231)||(3116060-3116099)
chr1 (169-208)||(9177732-9177771)
chr1 (132-231)||(12256597-12256694)
chr1 (158-205)||(26936874-26936920)
chr1 (166-228)||(13412454-13412515)
chr1 (158-212)||(26542988-26543042)
chr1 (228-266)||(48819275-48819313)
chr1 (158-216)||(51409720-51409778)
chr1 (233-266)||(391130-391163)
chr1 (233-262)||(1565284-1565313)
chr1 (166-231)||(5347178-5347242)
chr1 (158-223)||(15235167-15235231)
chr1 (158-227)||(16225524-16225592)
chr1 (166-231)||(17814214-17814278)
chr1 (170-231)||(29333444-29333505)
chr1 (166-231)||(35275896-35275960)
chr1 (166-231)||(41576393-41576458)
chr1 (232-264)||(7145207-7145239)
chr1 (158-210)||(37148112-37148164)
chr1 (158-210)||(37156937-37156989)
chr1 (167-231)||(42363624-42363688)
chr1 (233-261)||(47413520-47413548)
[»] chr5 (84 HSPs)
chr5 (158-231)||(28625495-28625568)
chr5 (158-231)||(41534638-41534711)
chr5 (157-231)||(31637092-31637166)
chr5 (158-231)||(1473371-1473444)
chr5 (158-231)||(12987012-12987085)
chr5 (158-231)||(12467279-12467353)
chr5 (158-231)||(1868861-1868934)
chr5 (158-231)||(13060600-13060673)
chr5 (159-231)||(40452476-40452548)
chr5 (173-231)||(41419531-41419589)
chr5 (158-231)||(29922187-29922260)
chr5 (154-231)||(41059787-41059864)
chr5 (158-231)||(42706811-42706886)
chr5 (132-206)||(22201959-22202032)
chr5 (158-212)||(24030230-24030284)
chr5 (158-212)||(42852037-42852091)
chr5 (158-219)||(3977490-3977551)
chr5 (158-231)||(6144753-6144826)
chr5 (158-231)||(11912100-11912173)
chr5 (158-231)||(15122560-15122632)
chr5 (158-231)||(17657257-17657330)
chr5 (160-231)||(35536859-35536933)
chr5 (158-213)||(10537235-10537290)
chr5 (153-231)||(38461280-38461358)
chr5 (158-231)||(2878675-2878747)
chr5 (166-231)||(28357164-28357229)
chr5 (167-231)||(43319027-43319091)
chr5 (158-229)||(7364309-7364380)
chr5 (132-231)||(11991295-11991392)
chr5 (158-228)||(342005-342075)
chr5 (166-231)||(5559917-5559985)
chr5 (158-231)||(40697016-40697094)
chr5 (158-231)||(1576646-1576718)
chr5 (158-231)||(1608097-1608169)
chr5 (158-223)||(3520509-3520573)
chr5 (161-238)||(7984123-7984200)
chr5 (158-231)||(11706916-11706989)
chr5 (158-206)||(1943025-1943073)
chr5 (132-208)||(11163290-11163365)
chr5 (167-231)||(29659084-29659148)
chr5 (158-206)||(43268644-43268692)
chr5 (158-231)||(13625518-13625592)
chr5 (158-208)||(17128293-17128343)
chr5 (169-231)||(28357378-28357440)
chr5 (181-231)||(39154759-39154809)
chr5 (166-231)||(6025983-6026048)
chr5 (159-231)||(18602618-18602691)
chr5 (158-231)||(26003012-26003085)
chr5 (158-231)||(33757103-33757175)
chr5 (158-231)||(40152874-40152947)
chr5 (167-231)||(29418750-29418814)
chr5 (165-208)||(2670097-2670140)
chr5 (133-231)||(14243814-14243912)
chr5 (147-210)||(32508158-32508221)
chr5 (157-203)||(6150391-6150437)
chr5 (228-266)||(42706772-42706810)
chr5 (233-266)||(1576779-1576812)
chr5 (233-266)||(1608003-1608036)
chr5 (166-231)||(23087777-23087842)
chr5 (168-233)||(29658051-29658115)
chr5 (170-231)||(42808878-42808939)
chr5 (158-203)||(43265967-43266012)
chr5 (161-212)||(17868193-17868245)
chr5 (175-231)||(27805947-27806003)
chr5 (165-224)||(1371999-1372057)
chr5 (177-212)||(2577446-2577481)
chr5 (158-221)||(4728861-4728923)
chr5 (158-231)||(7110985-7111054)
chr5 (233-262)||(1942990-1943019)
chr5 (144-209)||(6125289-6125353)
chr5 (170-231)||(15414019-15414080)
chr5 (158-227)||(16722042-16722110)
chr5 (175-212)||(19840058-19840095)
chr5 (233-266)||(22573787-22573820)
chr5 (158-231)||(33667391-33667463)
chr5 (170-231)||(40415970-40416031)
chr5 (233-265)||(1868989-1869021)
chr5 (234-266)||(2577507-2577539)
chr5 (233-269)||(13739377-13739413)
chr5 (233-261)||(28970169-28970197)
chr5 (158-210)||(36106758-36106810)
chr5 (233-261)||(40697154-40697182)
chr5 (233-261)||(41125671-41125699)
chr5 (158-210)||(42558740-42558791)
[»] chr3 (56 HSPs)
chr3 (158-231)||(43079932-43080005)
chr3 (158-231)||(52421139-52421212)
chr3 (158-231)||(29270376-29270449)
chr3 (158-231)||(53218038-53218111)
chr3 (160-231)||(34707711-34707782)
chr3 (158-231)||(22809191-22809265)
chr3 (162-231)||(40240575-40240644)
chr3 (132-231)||(40581074-40581173)
chr3 (158-225)||(10521169-10521236)
chr3 (158-225)||(10667413-10667480)
chr3 (158-231)||(52021261-52021335)
chr3 (158-227)||(3845870-3845939)
chr3 (159-228)||(23816172-23816240)
chr3 (158-230)||(2086690-2086762)
chr3 (132-231)||(10448764-10448862)
chr3 (158-212)||(3870243-3870297)
chr3 (158-231)||(585035-585108)
chr3 (160-225)||(7292697-7292762)
chr3 (158-231)||(29614209-29614281)
chr3 (158-231)||(42956177-42956250)
chr3 (158-231)||(45331293-45331366)
chr3 (158-231)||(51409408-51409481)
chr3 (128-231)||(11528877-11528979)
chr3 (173-231)||(20365433-20365491)
chr3 (158-231)||(3645318-3645390)
chr3 (158-231)||(4257298-4257372)
chr3 (167-231)||(28741212-28741276)
chr3 (158-228)||(10272137-10272205)
chr3 (160-231)||(48597865-48597936)
chr3 (158-211)||(5129833-5129886)
chr3 (160-225)||(32900732-32900797)
chr3 (170-227)||(37243493-37243550)
chr3 (158-231)||(43971845-43971918)
chr3 (167-231)||(1516096-1516160)
chr3 (158-212)||(3876280-3876334)
chr3 (158-231)||(47403760-47403834)
chr3 (158-231)||(20894518-20894590)
chr3 (134-231)||(32901146-32901242)
chr3 (175-228)||(43069078-43069131)
chr3 (169-213)||(15444002-15444046)
chr3 (158-210)||(21296781-21296833)
chr3 (228-264)||(45331367-45331403)
chr3 (170-229)||(4974338-4974397)
chr3 (171-210)||(29002740-29002779)
chr3 (170-221)||(30473151-30473202)
chr3 (161-231)||(20174938-20175008)
chr3 (166-231)||(24842105-24842170)
chr3 (158-231)||(36182518-36182592)
chr3 (233-267)||(53261838-53261872)
chr3 (163-224)||(2145667-2145728)
chr3 (234-263)||(23555449-23555478)
chr3 (166-231)||(37456432-37456496)
chr3 (166-231)||(53787750-53787815)
chr3 (173-209)||(27769675-27769711)
chr3 (170-238)||(30383795-30383863)
chr3 (170-210)||(51662831-51662871)
[»] chr2 (62 HSPs)
chr2 (158-231)||(33321310-33321383)
chr2 (158-231)||(4026941-4027013)
chr2 (161-231)||(36501513-36501583)
chr2 (158-230)||(25836711-25836783)
chr2 (165-231)||(12223874-12223940)
chr2 (158-231)||(887427-887500)
chr2 (160-231)||(13056325-13056396)
chr2 (161-227)||(12442831-12442897)
chr2 (162-231)||(2790068-2790137)
chr2 (158-227)||(11776999-11777068)
chr2 (158-231)||(21788472-21788545)
chr2 (161-231)||(755739-755810)
chr2 (154-212)||(11072956-11073015)
chr2 (168-231)||(38216044-38216107)
chr2 (158-231)||(4090504-4090577)
chr2 (132-213)||(33321419-33321499)
chr2 (158-231)||(43787801-43787874)
chr2 (146-231)||(5516079-5516164)
chr2 (158-231)||(8832469-8832545)
chr2 (158-224)||(9140735-9140800)
chr2 (158-212)||(34913407-34913461)
chr2 (165-231)||(39592271-39592337)
chr2 (170-231)||(735991-736052)
chr2 (158-231)||(12683604-12683677)
chr2 (158-231)||(29133665-29133738)
chr2 (158-231)||(29774760-29774833)
chr2 (158-231)||(32366165-32366237)
chr2 (158-231)||(32522044-32522116)
chr2 (158-231)||(37409658-37409731)
chr2 (158-231)||(42839319-42839391)
chr2 (171-231)||(5903561-5903621)
chr2 (132-223)||(13097906-13097998)
chr2 (158-231)||(12238484-12238554)
chr2 (144-231)||(15155815-15155901)
chr2 (158-231)||(4004834-4004907)
chr2 (166-231)||(8342998-8343062)
chr2 (166-231)||(12267020-12267085)
chr2 (158-231)||(38471789-38471862)
chr2 (132-188)||(735909-735964)
chr2 (173-231)||(16108120-16108178)
chr2 (178-231)||(23956262-23956315)
chr2 (229-266)||(33321217-33321254)
chr2 (173-225)||(42064881-42064933)
chr2 (228-263)||(17317158-17317193)
chr2 (166-208)||(17546414-17546456)
chr2 (158-216)||(22422182-22422239)
chr2 (228-262)||(43796910-43796944)
chr2 (183-212)||(1120325-1120354)
chr2 (232-269)||(4016034-4016070)
chr2 (233-266)||(9140649-9140682)
chr2 (233-262)||(12223984-12224013)
chr2 (233-266)||(13097878-13097911)
chr2 (142-231)||(19683574-19683660)
chr2 (170-231)||(24439046-24439107)
chr2 (168-221)||(27881005-27881058)
chr2 (158-207)||(41554602-41554651)
chr2 (159-191)||(27243575-27243607)
chr2 (158-194)||(35731153-35731189)
chr2 (233-265)||(37409791-37409823)
chr2 (158-206)||(37419987-37420034)
chr2 (233-265)||(38215986-38216018)
chr2 (154-229)||(45163885-45163961)
[»] chr6 (59 HSPs)
chr6 (154-231)||(7267786-7267863)
chr6 (158-231)||(2255749-2255822)
chr6 (158-229)||(21025227-21025298)
chr6 (158-229)||(24625866-24625937)
chr6 (161-231)||(8014806-8014876)
chr6 (158-231)||(2034227-2034300)
chr6 (158-230)||(29052348-29052420)
chr6 (176-231)||(13429488-13429543)
chr6 (158-231)||(1240608-1240682)
chr6 (158-228)||(2027177-2027247)
chr6 (158-231)||(10874001-10874072)
chr6 (176-231)||(25430763-25430819)
chr6 (162-230)||(34509931-34509999)
chr6 (158-221)||(10755288-10755351)
chr6 (166-225)||(16589774-16589833)
chr6 (166-225)||(16605547-16605606)
chr6 (158-231)||(3210994-3211072)
chr6 (158-231)||(10054396-10054467)
chr6 (153-231)||(32165259-32165336)
chr6 (158-231)||(21891336-21891409)
chr6 (158-231)||(32675887-32675960)
chr6 (168-231)||(6958649-6958712)
chr6 (158-209)||(30533995-30534046)
chr6 (158-228)||(6776823-6776893)
chr6 (157-231)||(18078244-18078318)
chr6 (132-209)||(6758617-6758693)
chr6 (158-231)||(7446860-7446933)
chr6 (158-231)||(10184328-10184400)
chr6 (166-231)||(34413342-34413407)
chr6 (158-222)||(6632674-6632738)
chr6 (167-231)||(21610047-21610111)
chr6 (170-229)||(4808599-4808657)
chr6 (159-231)||(9202397-9202473)
chr6 (167-218)||(10730252-10730303)
chr6 (158-205)||(12817116-12817163)
chr6 (158-231)||(991280-991354)
chr6 (132-206)||(2040209-2040282)
chr6 (158-228)||(23239262-23239332)
chr6 (174-231)||(7576859-7576916)
chr6 (158-231)||(32615413-32615485)
chr6 (158-210)||(9894781-9894833)
chr6 (160-231)||(15054583-15054654)
chr6 (166-225)||(16989765-16989824)
chr6 (144-231)||(34223523-34223609)
chr6 (228-266)||(2034301-2034339)
chr6 (170-228)||(10619254-10619312)
chr6 (158-231)||(10687322-10687398)
chr6 (158-223)||(1468191-1468254)
chr6 (158-231)||(3829917-3829990)
chr6 (166-231)||(4272405-4272470)
chr6 (166-227)||(5958343-5958404)
chr6 (186-215)||(6805770-6805799)
chr6 (153-210)||(8011065-8011122)
chr6 (166-231)||(17914969-17915033)
chr6 (158-231)||(22816583-22816656)
chr6 (132-221)||(29623485-29623573)
chr6 (231-263)||(8011135-8011167)
chr6 (165-205)||(21871308-21871347)
chr6 (229-261)||(25430850-25430882)
[»] chr4 (82 HSPs)
chr4 (166-231)||(17222852-17222917)
chr4 (158-231)||(28074380-28074452)
chr4 (158-231)||(7148787-7148860)
chr4 (158-231)||(29877654-29877727)
chr4 (158-231)||(48591422-48591495)
chr4 (132-231)||(948062-948161)
chr4 (166-238)||(23335665-23335737)
chr4 (160-228)||(35124404-35124472)
chr4 (128-230)||(27368151-27368252)
chr4 (158-231)||(18424276-18424348)
chr4 (132-231)||(23297428-23297523)
chr4 (158-231)||(36740919-36740992)
chr4 (158-231)||(52274118-52274191)
chr4 (158-231)||(43699479-43699554)
chr4 (159-231)||(46704268-46704340)
chr4 (158-229)||(12495644-12495717)
chr4 (158-231)||(896985-897058)
chr4 (132-229)||(8057088-8057184)
chr4 (166-231)||(21216326-21216391)
chr4 (158-231)||(32628793-32628866)
chr4 (158-231)||(38345820-38345892)
chr4 (158-231)||(39932752-39932825)
chr4 (158-231)||(41228918-41228991)
chr4 (160-231)||(2494398-2494469)
chr4 (176-231)||(28663606-28663661)
chr4 (162-229)||(55638081-55638148)
chr4 (161-231)||(488382-488452)
chr4 (132-225)||(212952-213043)
chr4 (158-231)||(4603330-4603402)
chr4 (132-231)||(1374360-1374459)
chr4 (171-231)||(36255034-36255094)
chr4 (132-227)||(42611870-42611964)
chr4 (160-231)||(2405205-2405275)
chr4 (144-231)||(52700542-52700628)
chr4 (163-225)||(18630899-18630961)
chr4 (158-228)||(35010226-35010296)
chr4 (147-229)||(45018537-45018619)
chr4 (158-227)||(825697-825766)
chr4 (158-231)||(2141656-2141729)
chr4 (132-209)||(3564210-3564286)
chr4 (158-211)||(4331352-4331405)
chr4 (158-231)||(8601216-8601289)
chr4 (158-231)||(15184562-15184634)
chr4 (166-231)||(19725316-19725381)
chr4 (158-231)||(46175977-46176049)
chr4 (158-224)||(30956697-30956764)
chr4 (158-225)||(43415293-43415360)
chr4 (159-225)||(7206590-7206656)
chr4 (167-221)||(26206362-26206416)
chr4 (164-210)||(29997329-29997375)
chr4 (153-231)||(43740074-43740151)
chr4 (158-231)||(10794908-10794980)
chr4 (158-231)||(46650286-46650359)
chr4 (167-231)||(35405708-35405772)
chr4 (228-267)||(7148747-7148786)
chr4 (158-213)||(8130503-8130558)
chr4 (132-231)||(10796376-10796473)
chr4 (193-231)||(22273830-22273868)
chr4 (158-231)||(2548045-2548118)
chr4 (170-231)||(22397303-22397364)
chr4 (158-207)||(29615389-29615438)
chr4 (172-213)||(33533957-33533998)
chr4 (170-231)||(39931542-39931602)
chr4 (229-266)||(42153067-42153104)
chr4 (158-231)||(47202841-47202913)
chr4 (158-203)||(48686964-48687009)
chr4 (195-231)||(9319100-9319136)
chr4 (180-212)||(40699393-40699425)
chr4 (233-265)||(43699574-43699606)
chr4 (166-225)||(42617234-42617292)
chr4 (158-224)||(9201666-9201731)
chr4 (228-266)||(9319177-9319215)
chr4 (234-264)||(38345730-38345760)
chr4 (161-206)||(11298611-11298656)
chr4 (158-231)||(22303111-22303183)
chr4 (233-266)||(23297400-23297433)
chr4 (233-266)||(29877601-29877634)
chr4 (233-266)||(34633361-34633394)
chr4 (132-231)||(9153580-9153678)
chr4 (233-261)||(17222977-17223005)
chr4 (175-227)||(42153193-42153245)
chr4 (228-268)||(52274192-52274232)
[»] chr7 (71 HSPs)
chr7 (158-231)||(29378660-29378733)
chr7 (158-231)||(47511058-47511131)
chr7 (162-226)||(30181569-30181633)
chr7 (158-231)||(20888588-20888662)
chr7 (162-231)||(14691297-14691366)
chr7 (158-231)||(44613471-44613544)
chr7 (154-231)||(21027511-21027588)
chr7 (166-225)||(14536905-14536964)
chr7 (162-231)||(6406870-6406939)
chr7 (166-231)||(22575609-22575674)
chr7 (158-231)||(29390549-29390621)
chr7 (167-231)||(14675958-14676021)
chr7 (158-210)||(34922946-34922998)
chr7 (144-231)||(23356489-23356575)
chr7 (158-231)||(41094233-41094304)
chr7 (166-231)||(41677397-41677463)
chr7 (158-231)||(48895311-48895389)
chr7 (166-231)||(16958839-16958903)
chr7 (166-231)||(22032785-22032850)
chr7 (158-231)||(23119918-23119991)
chr7 (158-231)||(38372573-38372646)
chr7 (170-231)||(47654412-47654473)
chr7 (176-235)||(17944686-17944745)
chr7 (172-231)||(39279458-39279517)
chr7 (167-206)||(40629440-40629479)
chr7 (144-231)||(43391723-43391809)
chr7 (158-211)||(7098118-7098171)
chr7 (166-231)||(16932928-16932992)
chr7 (166-231)||(16938311-16938375)
chr7 (154-231)||(23137161-23137237)
chr7 (158-231)||(35809105-35809178)
chr7 (158-210)||(41037768-41037819)
chr7 (158-231)||(46743965-46744041)
chr7 (158-240)||(1054056-1054139)
chr7 (169-212)||(31613682-31613725)
chr7 (167-222)||(43818886-43818941)
chr7 (158-209)||(48021667-48021718)
chr7 (181-231)||(16012736-16012786)
chr7 (153-231)||(19308489-19308567)
chr7 (144-210)||(28759859-28759924)
chr7 (158-227)||(991515-991583)
chr7 (158-231)||(18855268-18855341)
chr7 (158-231)||(32917590-32917663)
chr7 (178-228)||(37779283-37779335)
chr7 (192-225)||(48949769-48949802)
chr7 (175-231)||(7774745-7774800)
chr7 (179-231)||(12473389-12473441)
chr7 (167-231)||(14593172-14593239)
chr7 (158-194)||(33288134-33288170)
chr7 (128-231)||(39803010-39803112)
chr7 (166-209)||(49104401-49104444)
chr7 (166-231)||(9024787-9024853)
chr7 (132-190)||(12473196-12473253)
chr7 (132-206)||(26331801-26331874)
chr7 (158-228)||(28004599-28004668)
chr7 (158-231)||(35246687-35246757)
chr7 (158-227)||(1312129-1312197)
chr7 (198-231)||(14730019-14730052)
chr7 (188-225)||(15819530-15819567)
chr7 (142-223)||(19913945-19914025)
chr7 (170-231)||(22319289-22319350)
chr7 (133-210)||(24414514-24414590)
chr7 (233-266)||(25908442-25908475)
chr7 (165-229)||(37465886-37465951)
chr7 (233-266)||(40629338-40629371)
chr7 (233-266)||(40629507-40629540)
chr7 (228-261)||(47511024-47511057)
chr7 (233-261)||(18837189-18837217)
chr7 (158-210)||(18837237-18837289)
chr7 (233-261)||(33287985-33288013)
chr7 (233-265)||(38372706-38372738)
[»] scaffold0157 (1 HSPs)
scaffold0157 (158-229)||(24760-24833)
[»] scaffold0024 (1 HSPs)
scaffold0024 (158-220)||(97215-97277)
[»] scaffold0332 (2 HSPs)
scaffold0332 (158-231)||(14744-14817)
scaffold0332 (158-231)||(14851-14925)
[»] scaffold0041 (1 HSPs)
scaffold0041 (158-231)||(108992-109063)
[»] scaffold0012 (1 HSPs)
scaffold0012 (158-231)||(178515-178589)
[»] scaffold0048 (1 HSPs)
scaffold0048 (158-231)||(58866-58939)
[»] scaffold0512 (1 HSPs)
scaffold0512 (158-219)||(4080-4141)
[»] scaffold0057 (2 HSPs)
scaffold0057 (163-231)||(24387-24455)
scaffold0057 (158-210)||(43835-43887)
[»] scaffold1367 (1 HSPs)
scaffold1367 (158-228)||(1073-1143)
[»] scaffold0004 (2 HSPs)
scaffold0004 (158-231)||(227721-227795)
scaffold0004 (158-231)||(242638-242710)
[»] scaffold0299 (1 HSPs)
scaffold0299 (158-227)||(11302-11371)
[»] scaffold0071 (1 HSPs)
scaffold0071 (169-213)||(18145-18189)
[»] scaffold0027 (1 HSPs)
scaffold0027 (158-226)||(142354-142422)
[»] scaffold1088 (1 HSPs)
scaffold1088 (173-231)||(1324-1382)
[»] scaffold0006 (1 HSPs)
scaffold0006 (166-228)||(278993-279054)


Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 35168657 - 35168439
Alignment:
Q  13 caaagggattattaacttcctgtacacacaacaaataaatagagctatcattcattcataccaaacagaacaagtcatattattatccgtaagaaaagct 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35168657 caaagggattattaacttcctgtacacacgacaaataaatagagctatcattcattcataccaaacagaacaagtcatattattatccgtaagaaaagct 35168558  T
Q  113 ttgagacaacataaatgaacttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35168557 ttgagacaacataaatgaacttatgcaacataacttatgcaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 35168458  T
Q  213 gtttatgaagatacaattt 231  Q
    |||||||||||||||||||    
T  35168457 gtttatgaagatacaattt 35168439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 228 - 366
Target Start/End: Complemental strand, 35168395 - 35168256
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcctattattattaatgttcttggg-ttttggacttaacctagcatcaatgtttatcagagacc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35168395 atttacataagctcaaaaataagccaatccaaacgggcctattattattaatgttcttggggttttggacttaacctagcatcaatgtttatcagagacc 35168296  T
Q  327 agttgacaggtaaggcattgtcttacccacacattgagcc 366  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35168295 agttgacaggtaaggcattgtcttacccacacattgagcc 35168256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 32975702 - 32975775
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  32975702 aaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaattt 32975775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 34286634 - 34286562
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  34286634 aaataagcttttatgtattattcataagcttgtcaaggtagtttgtg-aaaaacagcttatgaagatacaattt 34286562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 10298990 - 10298924
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10298990 cttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 10298924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 28879073 - 28879139
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  28879073 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat 28879139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 35453425 - 35453488
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaa 221  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  35453425 aaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaacagcttatgaa 35453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 38895674 - 38895745
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  38895674 aaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaat 38895745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 16972428 - 16972354
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||    
T  16972428 aaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaattt 16972354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 19327857 - 19327954
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| | |||||||| |||  |||||| ||||||||||||||||||||| |||| || |||||||||| ||||||||||||| ||||||||||||    
T  19327857 cttatgcaaaacaacttatgcaaat-aaataaacttttatgtattattcataagtttgt-aatgtagtttatggaaaaacagtttataaagatacaattt 19327954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 24350587 - 24350517
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||| || ||||||||||| |||||    
T  24350587 taagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattt 24350517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 12607095 - 12607167
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||||||| |||||||||||||||||||    
T  12607095 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacggtttatgaagatacaattt 12607167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 32131455 - 32131528
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||| |||||   ||||||||||||||||    
T  32131455 aaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaagatacaattt 32131528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 35285943 - 35286016
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||  | |||||||||||||||||    
T  35285943 aaataagcttttgtgtgttattcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaattt 35286016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 42363387 - 42363315
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||||||| |||||||||||||||||||    
T  42363387 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattt 42363315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 9131197 - 9131126
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||| ||||||||||| |  |||||| |||| |||||| |||||||||||||||||    
T  9131197 ataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattt 9131126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 8216967 - 8216901
Alignment:
Q  166 ttttatgtattattcataagcttgtc-aaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  || |||||||||||||||||    
T  8216967 ttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagatacaattt 8216901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 32213093 - 32213043
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 208  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  32213093 aaataagcttttatgtattattcataagcttgtcaggttagtttatgaaaa 32213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 11988212 - 11988284
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | ||||||||| |||||||||| |||||||||||||||||||    
T  11988212 aaataagtttttatgtattatttataagttttt-aaggtagttcatgaaaaaaccgtttatgaagatacaattt 11988284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 14709607 - 14709535
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||  |||||||||||||||||| |||||||||||||||||| | ||||| |||||||||    
T  14709607 aaataagcttttaagtacaattcataagcttgtcaagctagtttatgaaaaaacagctcatgaa-atacaattt 14709535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 14942439 - 14942512
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||   |||||||||| ||||||    
T  14942439 aaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaattt 14942512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 19925572 - 19925645
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||  ||||||| ||||| |||| |||||| |||| ||||||||| ||||||||||||||||||    
T  19925572 aaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattt 19925645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 37410983 - 37410911
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||||||||||| |||||||||||||||    
T  37410983 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattt 37410911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 42102122 - 42102194
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||||||| ||| |||||||||||||||    
T  42102122 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgttaatgaagatacaattt 42102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 13265499 - 13265547
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  13265499 aaataagcttttatgtattattcataagcttgtcaaagtagttcatgaa 13265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 34102787 - 34102684
Alignment:
Q  128 tgaacttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||| |||||||| |||| |||||  ||| ||||||||||||||||||||||||| || || | || ||||||||||||||| || || || || |||||    
T  34102787 tgaatttatgcaaaataatttatgccaaataaataagcttttatgtattattcatgagtttttaaatgtagtttatgaaaaatcaattaataaaaataca 34102688  T
Q  228 attt 231  Q
    ||||    
T  34102687 attt 34102684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 13131445 - 13131527
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtca---------aggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||| ||||||| |||||||||    
T  13131445 aaataagcttttatgtattattcataagtttgtcatgtcaaggtaggtagtttatgaaaaaacagcttatgaaaatacaattt 13131527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 24867011 - 24866949
Alignment:
Q  169 tatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||| |||||||| ||||||||    
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattt 24866949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 1089028 - 1089081
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaac 211  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  1089028 aaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaac 1089081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 2669663 - 2669732
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||||| | |||||||||| ||||| |||| |||||||||||||||||||||  ||||||| |||||    
T  2669663 aaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatataca 2669732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 18396950 - 18396909
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcctat 269  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  18396950 atttgcataagctcaaaaataagccaatccaaacgggcctat 18396909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 23412758 - 23412815
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagat 224  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||| ||||| |||||    
T  23412758 tttatgtattattcataaacttgtcaatatagtttatgaaaaaacaatttataaagat 23412815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 24087189 - 24087237
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||    
T  24087189 aagcttttatatattattcataagcttgtcgagatagtttatgaaaaaa 24087237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 28280724 - 28280788
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaag 222  Q
    ||||| || ||||||||||||| ||||| |||| || ||||||||||||||||| ||||||||||    
T  28280724 aaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaactgtttatgaag 28280788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 8752821 - 8752891
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||||||||||| |||||||||| || |  |||||| ||| ||||||||||||||| ||| ||||||||||    
T  8752821 aaataagcttttgtgtattattcgtaggtgtgtcaaagtaatttatgaaaaaacagcttaagaagatacaa 8752891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 32924283 - 32924210
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||| | ||||| ||||||||||  | ||||||||||||||||||  ||||||||||| |||||    
T  32924283 aaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaaattt 32924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 38195502 - 38195574
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||| ||||||| ||||| || | ||||||||||| |||||||||||||||| | |||||||||    
T  38195502 aaataagtttttatatattatttataagttttt-aaggtagtttacgaaaaaacagtttatggaaatacaattt 38195574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 10298865 - 10298833
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggc 265  Q
    |||||||||||||||||||||||||||||||||    
T  10298865 cataagctcaaaaataagccaatccaaacgggc 10298833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 11461255 - 11461294
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcct 267  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  11461255 atttgcataaggtcaaaaataagccaatccaaacgggcct 11461294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 25333776 - 25333730
Alignment:
Q  184 agcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||    
T  25333776 agcttgtcaaggtagtttatga-aaaacaacttatgaagatacaattt 25333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 26047040 - 26046974
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaac 211  Q
    |||||||| |||| || ||||||||||| ||||||| | ||||||||  |||||||||||||||||||    
T  26047040 aacttatgcaaaa-aagtaagcttttatttattattaacaagcttgttgaggtagtttatgaaaaaac 26046974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 38338921 - 38338855
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||| |||||  ||||||| ||||| || | ||||||||||||||||||| ||||||||||||||    
T  38338921 aaataagtttttaaatattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagata 38338855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 41145469 - 41145412
Alignment:
Q  158 aaataagcttttat---gtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||||||||||||    ||||||||||||| |||| |||||||||||||||||||||    
T  41145469 aaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaaca 41145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 45548241 - 45548143
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| |||||| ||| |||| ||||| |||||||| | ||||||| |||||||| ||  ||||||||||||| |||  ||| ||||||| |||||    
T  45548241 cttatgcaaaataactaatg-aaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaaatacaacttaggaagataaaattt 45548143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 2289957 - 2289903
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||||| |||||| |||||| ||||||||||| ||| ||||||| |||||||||    
T  2289957 aaataagtttttatttattatccataagcttgttaagatagtttaagaaaaaaca 2289903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 10480056 - 10480026
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgg 263  Q
    |||||||||||||||||||||||||||||||    
T  10480056 cataagctcaaaaataagccaatccaaacgg 10480026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 16706163 - 16706117
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||||||| |||  || ||||||||||||||||||    
T  16706163 ttttatgtattattcataagtttgaaaatgtagtttatgaaaaaaca 16706117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 29218322 - 29218249
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaacagtttatgaagatacaattt 231  Q
    ||||| ||||||||||||||  |||| |||| |||||| |||||  ||||||| |||||||||||||| |||||    
T  29218322 ataagtttttatgtattatttttaagtttgttaaggtattttataagaaaaaatagtttatgaagatataattt 29218249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 29713237 - 29713267
Alignment:
Q  196 tagtttatgaaaaaacagtttatgaagatac 226  Q
    |||||||||||||||||||||||||||||||    
T  29713237 tagtttatgaaaaaacagtttatgaagatac 29713267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 34286635 - 34286673
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  34286635 atttacataagctcaaaaataagtcaatccaaacaggcc 34286673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 218315 - 218252
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||||||||||    
T  218315 ttttatgtattatttataagttttt-aaggtagtttatgaaaaacta-tttatgaagatacaattt 218252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 694875 - 694812
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||||||||||    
T  694875 ttttatgtattatttataagttttt-aaggtagtttatgaaaaacta-tttatgaagatacaattt 694812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 699084 - 699021
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||||||||||    
T  699084 ttttatgtattatttataagttttt-aaggtagtttatgaaaaacta-tttatgaagatacaattt 699021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 731938 - 731875
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||||||||||    
T  731938 ttttatgtattatttataagttttt-aaggtagtttatgaaaaacta-tttatgaagatacaattt 731875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 855834 - 855771
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||||||||||||||||||  | ||||||||||||||||||    
T  855834 ttttatgtattatttataagttttt-aaggtagtttatgaaaaacta-tttatgaagatacaattt 855771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 2563385 - 2563446
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| ||||| |||| || ||||||||||||||||||  || |||| |||||||||    
T  2563385 atgtattatttataagtttgttaaagtagtttatgaaaaaacaacttttgaatatacaattt 2563446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 14262353 - 14262414
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||| ||||  |||| |||||||||||||||||||||  ||||||| |||||||||    
T  14262353 atgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaattt 14262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 28879072 - 28879035
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggc 265  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  28879072 atttgcataagctcaaaaataagccaattcaaacgggc 28879035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 31079237 - 31079164
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| || |||||||||||||  |||| |||| || |||||||| |||||||| |||||| ||| ||||||||    
T  31079237 aaatatgcatttatgtattatttttaagtttgttaaagtagtttacgaaaaaactgtttataaagttacaattt 31079164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 4326284 - 4326232
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||  ||||||||||||||||||| || | || ||||||||||||||||    
T  4326284 aaataagtctttatgtattattcataagtttataaatgtagtttatgaaaaaa 4326232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 11460796 - 11460828
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggc 265  Q
    |||||||||||||||||| ||||||||||||||    
T  11460796 cataagctcaaaaataagtcaatccaaacgggc 11460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 14942423 - 14942391
Alignment:
Q  229 tttacataagctcaaaaataagccaatccaaac 261  Q
    ||||||||||||| |||||||||||||||||||    
T  14942423 tttacataagctctaaaataagccaatccaaac 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 29243134 - 29243083
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||||||||||||||||| ||||| || | |||||||||||| ||||||    
T  29243134 aaataagcttttatgtattatttataag-tttttaaggtagtttattaaaaaa 29243083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 6337827 - 6337754
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6337827 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 6337754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 15515418 - 15515345
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  15515418 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattt 15515345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 26988163 - 26988235
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatt 230  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26988163 aaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatt 26988235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 3069922 - 3069852
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3069922 taagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 3069852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 41196782 - 41196708
Alignment:
Q  157 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  41196782 caaataagtttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaattt 41196708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 4068130 - 4068203
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  4068130 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactattt 4068203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 16889036 - 16888964
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  16889036 aaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattt 16888964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 37329483 - 37329410
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  37329483 aaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 37329410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 35590145 - 35590218
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  35590145 aaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaagatacaattt 35590218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 48819314 - 48819383
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48819314 aaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 48819383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 28690021 - 28690092
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  28690021 ataaggttttatgtattattcataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaattt 28690092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 18327539 - 18327612
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | |||||||    
T  18327539 aaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaacagcttatgaacacacaattt 18327612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 37712084 - 37712152
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  37712084 aataagcttttatgtat-attcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaa 37712152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 26946176 - 26946102
Alignment:
Q  158 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  26946176 aaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatacaattt 26946102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 1005355 - 1005428
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||   |||||||||||||||||    
T  1005355 aaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactacttatgaagatacaattt 1005428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 31378822 - 31378749
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  31378822 aaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaattt 31378749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 23544819 - 23544875
Alignment:
Q  171 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaataca 23544875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 13038962 - 13039029
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||  |||||||||||    
T  13038962 aaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagata 13039029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 45267480 - 45267554
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||  |||||||| || ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  45267480 aaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattt 45267554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 17628495 - 17628423
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||||||| |||||||||||||||||||    
T  17628495 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattt 17628423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 32497342 - 32497270
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | ||||||||||||||||||||||||||||| ||||||||||    
T  32497342 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaggatacaattt 32497270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 46501072 - 46500999
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||| ||||||||| ||||||||||||  |||||||||||||||| || |||||||||||||||||    
T  46501072 aaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaattt 46500999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 9572856 - 9572788
Alignment:
Q  158 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||| || ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  9572856 aaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagata 9572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 36423052 - 36422985
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||  |||||||||||    
T  36423052 aaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagata 36422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 39658379 - 39658321
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||    
T  39658379 tattattcataagcttgccaaggtaatttatgaaaaaacagcttatgaaggtacaattt 39658321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 5243474 - 5243402
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||| ||||||||| ||||| || | ||||||||||||||||||| ||||||||||||||||||||    
T  5243474 aaataagtttttgtgtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatacaattt 5243402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 15631919 - 15631992
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| |||| || ||| ||||||||||||| ||||||||| |||||||||    
T  15631919 aaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaaaatacaattt 15631992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 20169279 - 20169352
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||| ||||| || | ||  ||||||||||||||||||||||| || |||||||||    
T  20169279 aaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatacaattt 20169352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 26435238 - 26435177
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||||||||||  |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  26435238 ttttatgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaagataca 26435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 42591397 - 42591466
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||||||  ||||||| ||||| |||| |||||| |||||||||||| ||||||||||||||||    
T  42591397 aaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagataca 42591466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 47413388 - 47413460
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||||||| ||||| ||||||||||| |||||    
T  47413388 aaatgagctttt-tgtattatttataagcttgtcaatgtagtttatgaaataacaggttatgaagatataattt 47413460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 1565449 - 1565401
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  1565449 aagcttttatgcattattcgtaagcttgtcaaggtagtttatgaaaaaa 1565401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 10850142 - 10850090
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  10850142 aaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaa 10850090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 49971275 - 49971339
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| ||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||||    
T  49971275 tttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaattt 49971339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 10365187 - 10365237
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  10365187 aataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaaa 10365237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 39941463 - 39941509
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaac 211  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  39941463 cttttatgtattattcataagcttgtcaaaatagtttatgaaaaaac 39941509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 39941533 - 39941579
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||    
T  39941533 ttttatgtattattcataagcttgtcaaagtagttaatgaaaaaaca 39941579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 50919517 - 50919575
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||| ||||||| ||||||||| ||||||||| |||||||||||||||||    
T  50919517 tattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaattt 50919575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 1265768 - 1265715
Alignment:
Q  154 aaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 207  Q
    ||||| ||||| |||||||||||||||||||  |||||||||||||||||||||    
T  1265768 aaacagataagattttatgtattattcataattttgtcaaggtagtttatgaaa 1265715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 15791399 - 15791471
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||||||  ||| |||||||||||||||    
T  15791399 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaatcgttaatgaagatacaattt 15791471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 22593470 - 22593405
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||| || | |||||| |||||| || ||||| ||||||||||||    
T  22593470 ttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaattt 22593405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 35282665 - 35282592
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| ||||| ||||||| |||| | ||| |||||||||||||||||||||  ||||||||||| |||||    
T  35282665 aaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattt 35282592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 41130017 - 41130082
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||| || |||| |||||||  ||||||  |||||||||||||||||    
T  41130017 ttttatgtattattcataagcttctctaggtggtttatgtcaaaacaacttatgaagatacaattt 41130082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 51162284 - 51162357
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| || |||||||||| | ||| |||| |||||||||||||||||||||  ||||||| |||||||||    
T  51162284 aaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaattt 51162357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 10082265 - 10082317
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  10082265 aaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaa 10082317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 19284911 - 19284986
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa--aacagtttatgaagatacaattt 231  Q
    ||||||||| |||||||||||| ||||| |||| ||| || ||||| ||||  |||||||||||||||||||||||    
T  19284911 aaataagctattatgtattatttataagtttgttaagatattttataaaaaaaaacagtttatgaagatacaattt 19284986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 18317032 - 18317087
Alignment:
Q  174 attattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    |||||||||||| |||||||||||| |||||||||||||   ||||||||||||||    
T  18317032 attattcataagattgtcaaggtaggttatgaaaaaacatcctatgaagatacaat 18317087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 39941605 - 39941664
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||| |||||||| ||||| ||||||||  ||||||||||||||||| ||||||||||||    
T  39941605 ttttctgtattatacataaacttgtcaaattagtttatgaaaaaacaatttatgaagata 39941664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 46473109 - 46473176
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||| |||||||||| || || | |||||||| ||||||||||||  |||||||||||    
T  46473109 aaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagata 46473176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 5610531 - 5610597
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattta 232  Q
    |||||||||||||| |||||||| | || ||||||||| |||||| ||||||||||| || ||||||    
T  5610531 ttttatgtattatttataagctttttaatgtagtttataaaaaaatagtttatgaaggtaaaattta 5610597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 19220184 - 19220261
Alignment:
Q  153 aaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||| |||||||||||||| ||| | || | ||||||||||||||||||||  ||||||||||| ||||||    
T  19220184 aaaataaataagtttttatgtattatttataggttttt-aaggtagtttatgaaaaaactatttatgaagatgcaattt 19220261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 39941393 - 39941438
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  39941393 ttttatgtattattcataagcttgtcaaagtag-ttatgaaaaaaca 39941438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 25485771 - 25485836
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| | |||||||| | ||| | ||||||||||||||||||||| |||||||||||| |||||    
T  25485771 ttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaaattt 25485836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 28122631 - 28122704
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||||| |||||||||| ||||| | ||||||||||||||||||| |  |||| |||||| |||||    
T  28122631 aaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattt 28122704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 35897718 - 35897646
Alignment:
Q  133 ttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    |||||||| | |||||||| |||  ||||||| |||||| |||||||||||||||| |||| ||||||||||||    
T  35897718 ttatgcaaaacaacttatgcaaat-aaataagtttttatttattattcataagcttttcaaagtagtttatgaa 35897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 36259354 - 36259289
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||| |||  |||| |  |||||||||||||||||||||||| || |||||||||    
T  36259354 ttttatgtattattcttaactttgtaagtgtagtttatgaaaaaacagtttataaacatacaattt 36259289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 41196652 - 41196615
Alignment:
Q  229 tttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||||||||||||||||||||||||||||||| |||||    
T  41196652 tttacataagctcaaaaataagccaatccaaatgggcc 41196615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 1683943 - 1683899
Alignment:
Q  187 ttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||    
T  1683943 ttgtcaaggtagtttatgaaaaaacagtttataaaactacaattt 1683899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 14461075 - 14461039
Alignment:
Q  195 gtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||| ||||||||||||    
T  14461075 gtagtttatgaaaaaacagtttataaagatacaattt 14461039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 41003402 - 41003454
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaa 209  Q
    ||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  41003402 aaataagtttttatgtattatttataagtttgtcaaaggtagtttatgaaaaa 41003454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 3116099 - 3116060
Alignment:
Q  192 aaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  3116099 aaggtagtttatgaaaaaaccatttatgaagatacaattt 3116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 9177771 - 9177732
Alignment:
Q  169 tatgtattattcataagcttgtcaaggtagtttatgaaaa 208  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  9177771 tatgtattattcataagcttgtcaacgtagtctatgaaaa 9177732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 12256597 - 12256694
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| | ||||||||||||  || || |||||||| ||||||| ||||| ||||  | |||||||||| ||||||| ||||||||| ||||||||    
T  12256597 cttatgcaaaacaacttatgtaaat-aattatgcttttatatattatttataagattgttgatgtagtttatg-aaaaacaatttatgaaggtacaattt 12256694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 26936874 - 26936920
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatga 205  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  26936874 aaataagcttctatgtat-actcataagcttgtcaaggtagtttatga 26936920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 13412515 - 13412454
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||  || ||||||||||||    
T  13412515 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccattcatgaagatacaa 13412454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 26542988 - 26543042
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||| |||||||||||||||  ||||| |||| || ||||||||||||||||||    
T  26542988 aaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaaca 26543042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 48819313 - 48819275
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  48819313 atttgcataagctcaaaaataagccaatccaaatgggcc 48819275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 51409778 - 51409720
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagttt 216  Q
    ||||||| || ||||||||||||||||| |||| || |||||||||||| | |||||||    
T  51409778 aaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaagatacagttt 51409720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 391163 - 391130
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||| ||||||||||||||||||||||||||||    
T  391163 cataacctcaaaaataagccaatccaaacgggcc 391130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 262
Target Start/End: Complemental strand, 1565313 - 1565284
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacg 262  Q
    ||||||||||||||||||||||||||||||    
T  1565313 cataagctcaaaaataagccaatccaaacg 1565284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 5347178 - 5347242
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | |||||||||||||||||||  | ||||||| |||||||||    
T  5347178 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattt 5347242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 15235231 - 15235167
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaaga 223  Q
    ||||||| |||||||||||||| ||||| || | |||  ||||||||||||||| |||||||||||    
T  15235231 aaataagtttttatgtattatttataagttttt-aagacagtttatgaaaaaacggtttatgaaga 15235167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 16225524 - 16225592
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||| |||||||||||| | ||||| |||| |||||| |||| |||||||||  |||||||||||||    
T  16225524 aaataagtttttatgtattaattataag-ttgttaaggtaatttaggaaaaaacaacttatgaagataca 16225592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 17814214 - 17814278
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | |||||||||||||||||||  | ||||||| |||||||||    
T  17814214 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattt 17814278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 29333444 - 29333505
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| ||||| |||| ||| ||| |||||||||||||  ||||||| |||||||||    
T  29333444 atgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaatatacaattt 29333505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 35275960 - 35275896
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | |||||||||||||||||| | ||||| ||| |||||||||    
T  35275960 ttttatgtattatttataagatttt-aaggtagtttatgaaaaacctgtttaggaatatacaattt 35275896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 41576458 - 41576393
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| |||| |||||||||| || || ||||||| ||| | |||||||||||||| |||||    
T  41576458 ttttatgtactatttataagcttgtaaatgttgtttatgtaaatatagtttatgaagatataattt 41576393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 7145239 - 7145207
Alignment:
Q  232 acataagctcaaaaataagccaatccaaacggg 264  Q
    ||||||||||||||||||| |||||||||||||    
T  7145239 acataagctcaaaaataagtcaatccaaacggg 7145207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 37148164 - 37148112
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||| || |||||||||| |||||  ||| |||||||||||||||||||    
T  37148164 aaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 37156989 - 37156937
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||| || |||||||||| |||||  ||| |||||||||||||||||||    
T  37156989 aaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 42363624 - 42363688
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||||||| ||   |||| |||||||||||||| |||||| ||| ||||    
T  42363624 tttatgtattatttataagcttgttaataaagttaatgaaaaaacagttgatgaaggtacgattt 42363688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Original strand, 47413520 - 47413548
Alignment:
Q  233 cataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||||||||||    
T  47413520 cataagctcaaaaataagccaatccaaac 47413548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 84)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 28625495 - 28625568
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28625495 aaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 28625568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 41534638 - 41534711
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  41534638 aaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattt 41534711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 31637166 - 31637092
Alignment:
Q  157 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  31637166 caaataagcttttatgtattattcataagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaattt 31637092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 1473371 - 1473444
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  1473371 aaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaattt 1473444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 12987085 - 12987012
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  12987085 aaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccattt 12987012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 12467279 - 12467353
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  12467279 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaattt 12467353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 1868861 - 1868934
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  1868861 aaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattt 1868934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 13060673 - 13060600
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||    
T  13060673 aaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattt 13060600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 40452548 - 40452476
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  40452548 aataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataattt 40452476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 41419531 - 41419589
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41419531 tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 41419589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 29922260 - 29922187
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||||    
T  29922260 aaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatatacaattt 29922187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 41059864 - 41059787
Alignment:
Q  154 aaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||  |||||||||| ||||||    
T  41059864 aaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattt 41059787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 42706811 - 42706886
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  42706811 aaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttatgaagatacaattt 42706886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 22202032 - 22201959
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    ||||||||| | | ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22202032 cttatgcaaaacagcttatgtaaat-aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 22201959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 24030230 - 24030284
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24030230 aaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaaca 24030284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 42852037 - 42852091
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42852037 aaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaaca 42852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 3977490 - 3977551
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatg 219  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  3977490 aaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtttatg 3977551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 6144753 - 6144826
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||||||||| || ||||||| |||||||||    
T  6144753 aaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaattt 6144826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 11912173 - 11912100
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||| |||||||| || |||||||||||||||||    
T  11912173 aaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaattt 11912100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 15122560 - 15122632
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  15122560 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattt 15122632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 17657257 - 17657330
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||  |||||||||||| ||||    
T  17657257 aaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattt 17657330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 35536859 - 35536933
Alignment:
Q  160 ataagcttttatgtattattcat---aagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||||||   |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  35536859 ataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattt 35536933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 10537290 - 10537235
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacag 213  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  10537290 aaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaacag 10537235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 38461358 - 38461280
Alignment:
Q  153 aaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| |||||||| ||||||||||||| ||||| |||| || ||| ||||||||||||||||||||||||||| |||||    
T  38461358 aaaataaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataattt 38461280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 2878747 - 2878675
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||||||||||| ||||||| || |||||||||| ||||||||| |||||||||||||    
T  2878747 aaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatacaattt 2878675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 28357164 - 28357229
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  28357164 ttttttgtattatttaaaagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattt 28357229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 43319027 - 43319091
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||| || |||||    
T  43319027 tttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattt 43319091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 7364380 - 7364309
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||| || |||||  |||||||||||||||    
T  7364380 aaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagatacaat 7364309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 11991295 - 11991392
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| | ||||||||||||  |||||||||||||||||||||| |||||||||| ||  | ||||||||||||| || ||||||| |||||||||    
T  11991295 cttatgcaaaacaacttatgtaaat-aaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaatag-ttatgaacatacaattt 11991392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 342005 - 342075
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||| |||||||||||||| | ||| ||| ||||||||||||||||||| ||| ||||||||||||||    
T  342005 aaataagtttttatgtattatttacaagtttgccaaggtagtttatgaaaaatcagcttatgaagatacaa 342075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 5559985 - 5559917
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa---cagtttatgaagatacaattt 231  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||   ||| |||||||||||||||||    
T  5559985 ttttatgtattcttcataagctcgtcaaggtagtttatgaaaaaaaagcagcttatgaagatacaattt 5559917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 40697016 - 40697094
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-----aaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||||     ||||||||| |||||||||||||||||    
T  40697016 aaataagtttttatgtattatttataagcttgtcaaggtattttatgaagaaaaaaaacagcttatgaagatacaattt 40697094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 1576646 - 1576718
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||| |||||||  || ||||||||||||||    
T  1576646 aaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaattt 1576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 1608169 - 1608097
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||| |||||||  || ||||||||||||||    
T  1608169 aaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaattt 1608097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 3520573 - 3520509
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaaga 223  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  3520573 aaataacctttta-gtattattcataagcttgtcaaggtagtttaggacaaaacagcttatgaaga 3520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 7984123 - 7984200
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatttacataag 238  Q
    |||| |||||||||||||||||||| ||||||| || ||||  ||||||||||||||  |||||||||||| ||||||    
T  7984123 taagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttcataag 7984200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 11706989 - 11706916
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||| |||| ||| |||||||| ||| |||||||| |||||  |||||||||||||||||    
T  11706989 aaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaattt 11706916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 1943025 - 1943073
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1943025 aaataagtttttatgtattatccataagcttgtcaaggtagtttatgaa 1943073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 11163365 - 11163290
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 208  Q
    ||||||||| | | |||||||||| ||| |||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  11163365 cttatgcaaaacagcttatgtaaatcaa-taagtttttatgtatgattcataagcttgtcgaggtagtttatgaaaa 11163290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 29659084 - 29659148
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||||||| || |||||||| ||||||||||||||||||  ||||||||    
T  29659084 tttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattt 29659148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 43268692 - 43268644
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  43268692 aaataagcttttatgtattattaataagctggtcaaggtagtttatgaa 43268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 13625592 - 13625518
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatga-aaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||| ||||||||||||||||||  ||||||||||||| |||||||| |||| |||||| |||||    
T  13625592 aaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattt 13625518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 17128293 - 17128343
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 208  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  17128293 aaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaa 17128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 28357378 - 28357440
Alignment:
Q  169 tatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| ||||| |||| || |||||||||||||||||||||||||||| | ||||||    
T  28357378 tatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattt 28357440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 39154809 - 39154759
Alignment:
Q  181 ataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  39154809 ataagcttgtcaaggtagtttatgaaaaaactgattatgaagatgcaattt 39154759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 6026048 - 6025983
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||  |||| || ||||||||||||||||| |||||| ||||||||||||    
T  6026048 ttttatgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaagatacaattt 6025983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 18602618 - 18602691
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||| |||||||||||||||||| ||||||| ||||| ||||||||  ||||||| |||||||||    
T  18602618 aataagtttttatttattattcataagcttgttaaggtagcttatgaaaaaaacaacttatgaatatacaattt 18602691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 26003012 - 26003085
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| |||| ||| || |||||||||||   |||||||||||||||||||    
T  26003012 aaataagtttttatgtattatttataagtttgttaagttattttatgaaaaagtggtttatgaagatacaattt 26003085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 33757103 - 33757175
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | ||| |||||||||||||||||||| |||||||||| ||||    
T  33757103 aaataagtttttatgtattatttataagttttt-aagctagtttatgaaaaaacagttaatgaagatacgattt 33757175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 40152947 - 40152874
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||| |||||| |||||  |||| ||| ||||||||||||||||| |||||||||||| |||||    
T  40152947 aaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattt 40152874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 29418814 - 29418750
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||| ||  || |||||||||||||||||| ||||||||| ||||||||    
T  29418814 tttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattt 29418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 2670097 - 2670140
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttatgaaaa 208  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  2670097 cttttatgtactattcataagtttgtcaaggtagtttatgaaaa 2670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 14243814 - 14243912
Alignment:
Q  133 ttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttat-gaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| | | ||||||||||  |||||||||| |||||| |||||||||| |  | |||||||||||| |||||||||| ||||||| |||||||||    
T  14243814 ttatgcaaaacagcttatgtaaat-aaataagcttctatgtaatattcataagttgtttaaggtagtttatggaaaaaacagcttatgaaaatacaattt 14243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 32508221 - 32508158
Alignment:
Q  147 ttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||| |||| ||| |||||||||| ||| |||||||| ||||| |||||||||||||||||||    
T  32508221 ttatgcaaaaaaaacaagcttttatttatcattcataaacttgttaaggtagtttatgaaaaaa 32508158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 6150391 - 6150437
Alignment:
Q  157 caaataagcttttatgtattattcataagcttgtcaaggtagtttat 203  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||    
T  6150391 caaatgaggttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 42706810 - 42706772
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  42706810 atttgcataagctcaaaaataagccaatccaaacgggcc 42706772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 1576779 - 1576812
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||||||||||||||    
T  1576779 cataagctcaaaaataagccaatccaaacgggcc 1576812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 1608036 - 1608003
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||||||||||||||    
T  1608036 cataagctcaaaaataagccaatccaaacgggcc 1608003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 23087842 - 23087777
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||  | |||||| ||||||||    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaattt 23087777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 29658115 - 29658051
Alignment:
Q  168 ttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatttac 233  Q
    |||||||||||||||||| |||| || ||||||||||| |||| ||||||| ||||| ||||||||    
T  29658115 ttatgtattattcataagtttgtaaatgtagtttatga-aaaagagtttataaagatgcaatttac 29658051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 42808878 - 42808939
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||| |||| ||  ||||| ||| ||||||| ||||||||||||||||||    
T  42808878 atgtattattcataagtttgtaaacatagttaatgcaaaaacaatttatgaagatacaattt 42808939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 43266012 - 43265967
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttat 203  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||    
T  43266012 aaataagcttttatgtatcattcataagcttgttaagatagtttat 43265967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 17868245 - 17868193
Alignment:
Q  161 taagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||||||| |||||||||  |||||||||||||||||||||||| |||||||    
T  17868245 taagcttttgtgtattattttataagcttgtcaaggtagtttatggaaaaaca 17868193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 27805947 - 27806003
Alignment:
Q  175 ttattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| ||| ||||||||| ||||||||||||||||||  |||| ||||||||||||    
T  27805947 ttatttatacgcttgtcaatgtagtttatgaaaaaacatgttataaagatacaattt 27806003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 1372057 - 1371999
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagat 224  Q
    ||||||||||||||| |||||||||| || || |||||||| ||||||||| ||||||||    
T  1372057 cttttatgtattatttataagcttgtaaatgtggtttatga-aaaacagttgatgaagat 1371999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 2577481 - 2577446
Alignment:
Q  177 attcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||||||||||||||||||| ||||||||||||||    
T  2577481 attcataagcttgtcaaggtaatttatgaaaaaaca 2577446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 4728861 - 4728923
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaa 221  Q
    ||||||| |||||||||||||  | ||| || | ||||||||||||||||||||||||||||||    
T  4728861 aaataagtttttatgtattatctacaagttttt-aaggtagtttatgaaaaaacagtttatgaa 4728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 7111054 - 7110985
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| | |||| ||||||||||||| |||||||   ||||||||||||| ||| |||||||||||||||||    
T  7111054 aaataagttcttatttattattcataagattgtcaa---agtttatgaaaaa-cagcttatgaagatacaattt 7110985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 262
Target Start/End: Complemental strand, 1943019 - 1942990
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacg 262  Q
    ||||||||||||||||||||||||||||||    
T  1943019 cataagctcaaaaataagccaatccaaacg 1942990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 6125289 - 6125353
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    ||||||||||||  |||||| |||||||||||||||||||| ||| | || ||| |||||||||||    
T  6125289 aacttatgtaaat-aaataaacttttatgtattattcataatcttataaatgtattttatgaaaaa 6125353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 15414019 - 15414080
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| ||||| |||| |||||||||||  ||||||||  ||||||| |||||||||    
T  15414019 atgtattattgataagtttgttaaggtagtttactaaaaaacaacttatgaatatacaattt 15414080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 16722042 - 16722110
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||| |||||||||||||| ||||  || | ||||||||||| ||| |||| |||||||||||||||    
T  16722042 aaataagtttttatgtattatttataaattttt-aaggtagtttacgaagaaaccgtttatgaagataca 16722110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 19840058 - 19840095
Alignment:
Q  175 ttattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  19840058 ttatttataagcttgtcaatgtagtttatgaaaaaaca 19840095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 22573787 - 22573820
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||||||||||||||||||||||||||| |||||    
T  22573787 cataagctcaaaaataagccaatccaaatgggcc 22573820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 33667463 - 33667391
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| | ||| || | |||||||||||||| |||| ||| ||||||||||| ||||    
T  33667463 aaataagtttttatgtattatttacaagttttt-aaggtagtttatgacaaaatagtatatgaagatacgattt 33667391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 40416031 - 40415970
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| ||||| |||| ||||||||| |||||||||||  ||| ||| |||||||||    
T  40416031 atgtattatttataagtttgttaaggtagttcatgaaaaaacaacttaagaatatacaattt 40415970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 1868989 - 1869021
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggc 265  Q
    ||||||||| |||||||||||||||||||||||    
T  1868989 cataagctcgaaaataagccaatccaaacgggc 1869021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 266
Target Start/End: Original strand, 2577507 - 2577539
Alignment:
Q  234 ataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||| |||||||||||||||||||||||||    
T  2577507 ataagctaaaaaataagccaatccaaacgggcc 2577539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 13739377 - 13739413
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcctat 269  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  13739377 cataaactcaaaaataagccaatccaaacggccctat 13739413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Original strand, 28970169 - 28970197
Alignment:
Q  233 cataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||||||||||    
T  28970169 cataagctcaaaaataagccaatccaaac 28970197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 36106810 - 36106758
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||||| |||||||||| ||||||||  |||| |||||||||||||| ||||    
T  36106810 aaataagtttttatgtatgattcataaatttgttaaggtagtttatgagaaaa 36106758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Original strand, 40697154 - 40697182
Alignment:
Q  233 cataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||||||||||    
T  40697154 cataagctcaaaaataagccaatccaaac 40697182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 41125699 - 41125671
Alignment:
Q  233 cataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||||||||||    
T  41125699 cataagctcaaaaataagccaatccaaac 41125671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 42558791 - 42558740
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||||||||||| ||| |||||||||| |||| || ||||||||||||||||    
T  42558791 aaataagcttttacgtactattcataagtttgttaa-gtagtttatgaaaaaa 42558740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 43080005 - 43079932
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43080005 aaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 43079932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 52421212 - 52421139
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  52421212 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaattt 52421139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 29270376 - 29270449
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||    
T  29270376 aaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagatacaattt 29270449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 53218111 - 53218038
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  53218111 aaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaattt 53218038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 34707782 - 34707711
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | | |||||||||||||    
T  34707782 ataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaattt 34707711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 22809265 - 22809191
Alignment:
Q  158 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22809265 aaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatacaattt 22809191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 40240644 - 40240575
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||||||||||||||||    
T  40240644 aagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattt 40240575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 40581173 - 40581074
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa-aaaacagtttatgaagatacaatt 230  Q
    ||||||||| | |||||||| |||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||| ||||||    
T  40581173 cttatgcaaaacaacttatgcaaat-aaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaacaatt 40581075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 10521169 - 10521236
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  10521169 aaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagata 10521236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 10667413 - 10667480
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  10667413 aaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagata 10667480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 52021261 - 52021335
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||    
T  52021261 aaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattt 52021335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 3845870 - 3845939
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||  ||||||||||||    
T  3845870 aaataagcttttatatattattcataagcttgtcaagctagtttatgacaaaacagcatatgaagataca 3845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 23816240 - 23816172
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  23816240 aataagcttttat-tattattcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaa 23816172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 2086762 - 2086690
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatt 230  Q
    |||||| ||||||||||||||| |||| ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  2086762 aaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatagtttatgaagatacaatt 2086690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 10448764 - 10448862
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| | |||||||| |||  ||||| || ||||||||||||| |||||||||| || |||||||||||||||||||||||||||| || |||||    
T  10448764 cttatgcaaaacaacttatgcaaat-aaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattt 10448862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 3870297 - 3870243
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  3870297 aaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaaca 3870243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 585035 - 585108
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||| |||||||| |||||| |  ||||||||||||||||||||  |||||||||||||||||    
T  585035 aaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattt 585108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7292697 - 7292762
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||    
T  7292697 ataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaacagtttatgatgata 7292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 29614209 - 29614281
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | ||||||||||||||||||||||||||||||||||||||||    
T  29614209 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattt 29614281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 42956250 - 42956177
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||||||||||||||||| |||||| | ||||||||||| ||||||| |||| ||||||||||||    
T  42956250 aaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattt 42956177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 45331366 - 45331293
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||||||||||| ||||||||||| |||  ||||||||||||||||  |||||||||||||||||    
T  45331366 aaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattt 45331293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 51409408 - 51409481
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| ||||||| |||||||||| || ||||||||||||||||||||||||||  ||||||||||| |||||    
T  51409408 aaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaaattt 51409481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 11528877 - 11528979
Alignment:
Q  128 tgaacttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||||||||| | |||||||||||   |||||||||||||||||||||||||||  |||| || ||||||||||| |||| |  ||||||||||| |    
T  11528877 tgaacttatgcaaaacaacttatgtaagt-aaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaaaaaattatgaagatata 11528975  T
Q  228 attt 231  Q
    ||||    
T  11528976 attt 11528979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 20365491 - 20365433
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||    
T  20365491 tattattcataagcttgtcaaagtactttatgaaaaagcagtttatgaagatataattt 20365433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 3645318 - 3645390
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||||||||||| |||||||||||||||    
T  3645318 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattt 3645390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 4257372 - 4257298
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa--cagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||||||  |||||||||||||||||||||    
T  4257372 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaaacagtttatgaagatacaattt 4257298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 28741276 - 28741212
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| | |||||||||| || ||||||||||||||||||| |||||||| ||||||||    
T  28741276 tttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattt 28741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 10272137 - 10272205
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||||| |||||||||||||||||||||||  |||||| ||||| ||||||||||| |||||| |||||||    
T  10272137 aaataaacttttatgtattattcataagct--tcaaggcagtttctgaaaaaacagcttatgaggatacaa 10272205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 48597936 - 48597865
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| |||||||  |||||||||||| ||||| ||||||| ||||||||||||  |||||||||||||||||    
T  48597936 ataaacttttataaattattcataagtttgtcgaggtagtgtatgaaaaaacaacttatgaagatacaattt 48597865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 5129886 - 5129833
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaac 211  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  5129886 aaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaac 5129833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 32900797 - 32900732
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||| |||||||||||| ||||| |||||||||| |||||||| |  |||||||||||    
T  32900797 ataagcttttatttattattcataaacttgttaaggtagtttgtgaaaaaataacttatgaagata 32900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 37243493 - 37243550
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||| |||||||||| || |||||||||||||||| ||||||||||| ||||    
T  37243493 atgtattatttataagcttgttaacgtagtttatgaaaaaatagtttatgaaggtaca 37243550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 43971918 - 43971845
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||||||| ||| |||| ||  |||||||||| |||||| |||||||||||| |||||    
T  43971918 aaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattt 43971845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 1516160 - 1516096
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| ||||| |||| |||||| |||||| |||| |||||||| ||||||||||||    
T  1516160 tttatgtattatttataagtttgttaaggtattttatggaaaatcagtttataaagatacaattt 1516096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 3876334 - 3876280
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||| ||||||||| |||||||||||| || || |||||||||||||||||||||    
T  3876334 aaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaaca 3876280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 47403834 - 47403760
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||| |||||||||||||  |||| || |||||||||| |||||| | ||||||||||||||||||    
T  47403834 aaataagtttttaggtattattcataaatttgtaaatgtagtttatgcaaaaaataatttatgaagatacaattt 47403760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 20894518 - 20894590
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | || ||||||| ||||||||||||| |||||||||||||||    
T  20894518 aaataagtttttatgtattatttataatttttt-aatgtagtttttgaaaaaacagttcatgaagatacaattt 20894590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 32901242 - 32901146
Alignment:
Q  134 tatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| | ||||||||||||  |||||||||||||| ||||||||| ||  |||| ||| |||||||| | ||||||  ||||||||||| |||||    
T  32901242 tatgcaaaacaacttatgtaaat-aaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattt 32901146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 43069078 - 43069131
Alignment:
Q  175 ttattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||||||| |||||||| |||||||||| ||||||| |||||| |||||||    
T  43069078 ttattcataagtttgtcaagatagtttatgagaaaacagcttatgaggatacaa 43069131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 15444002 - 15444046
Alignment:
Q  169 tatgtattattcataagcttgtcaaggtagtttatgaaaaaacag 213  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||    
T  15444002 tatgtattattcacaagcttgtaaaggtagtttctgaaaaaacag 15444046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 21296781 - 21296833
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||||| |||||| ||||||||||| | || |||||||||||||||||||||    
T  21296781 aaataagtttttatctattattcatacgtttatcaaggtagtttatgaaaaaa 21296833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 45331367 - 45331403
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacggg 264  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45331367 atttacataagctaaaaaataagccaatccaaacggg 45331403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 4974338 - 4974397
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    |||||||||| |||| ||||  |||||||||||||||||||||  ||||||| |||||||    
T  4974338 atgtattatttataaacttgctaaggtagtttatgaaaaaacaagttatgaatatacaat 4974397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 29002740 - 29002779
Alignment:
Q  171 tgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  29002740 tgtattattcataagcttgtcaaagtaatttatgaaaaaa 29002779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 30473202 - 30473151
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaa 221  Q
    |||||||||| ||||| |||| |||||||||||||||||||||  |||||||    
T  30473202 atgtattatttataaggttgttaaggtagtttatgaaaaaacaacttatgaa 30473151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 20175008 - 20174938
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| || |||||||||| |||| ||||  ||| |||||||||||||||||  ||||||| |||||||||    
T  20175008 taagcattaatgtattatttataaacttgctaagttagtttatgaaaaaacaacttatgaatatacaattt 20174938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 24842170 - 24842105
Alignment:
Q  166 ttttatgtattattcataagcttgtc-aaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||| ||||| || ||| |||||| |||||||  |||||||||||||||||    
T  24842170 ttttatgtattattcataagtttgtcaaatgtaatttatg-aaaaacaacttatgaagatacaattt 24842105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 36182518 - 36182592
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaac-agtttatgaagatacaattt 231  Q
    ||||||| |||||| |||||||||||||||| || | ||||| ||||||||||| || ||||||| ||| |||||    
T  36182518 aaataagtttttatttattattcataagcttttcgaagtagtatatgaaaaaactagcttatgaatatataattt 36182592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 53261838 - 53261872
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcct 267  Q
    |||||||||||||||||||||||||||| ||||||    
T  53261838 cataagctcaaaaataagccaatccaaatgggcct 53261872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 2145728 - 2145667
Alignment:
Q  163 agcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagat 224  Q
    |||||||||| |||||| ||||| || ||||| |||||| ||||||||  ||||||||||||    
T  2145728 agcttttatgaattatttataagtttatcaagatagtttgtgaaaaaattgtttatgaagat 2145667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 263
Target Start/End: Complemental strand, 23555478 - 23555449
Alignment:
Q  234 ataagctcaaaaataagccaatccaaacgg 263  Q
    ||||||||||||||||||||||||||||||    
T  23555478 ataagctcaaaaataagccaatccaaacgg 23555449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 37456496 - 37456432
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||| ||||||||||||||| | ||||| ||||||||||||    
T  37456496 ttttatgtattatttataagttttt-aagatagtttatgaaaaaataatttataaagatacaattt 37456432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 53787815 - 53787750
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| | |||||||| | ||  ||||||| ||||||||||||||| |||||| |||||    
T  53787815 ttttatgtattacttataagctttttaatatagtttacgaaaaaacagtttataaagatataattt 53787750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 27769675 - 27769711
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  27769675 tattatttataagcttgtcaatgtagtttatgaaaaa 27769711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 30383795 - 30383863
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatttacataag 238  Q
    |||| ||||| ||||  |||| |||||||||||||||||||||   |||||| ||||||||| ||||||    
T  30383795 atgtgttatttataaatttgttaaggtagtttatgaaaaaacaacctatgaatatacaattttcataag 30383863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 51662831 - 51662871
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||||| |||||||||| ||| |||||||||||||||    
T  51662831 atgtattatttataagcttgttaagatagtttatgaaaaaa 51662871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 33321383 - 33321310
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33321383 aaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 33321310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 4026941 - 4027013
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4026941 aaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 4027013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 36501583 - 36501513
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  36501583 taagtttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaattt 36501513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 25836783 - 25836711
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatt 230  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  25836783 aaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaatt 25836711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 12223874 - 12223940
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12223874 ctttcatgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagataccattt 12223940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 887427 - 887500
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||| | | |||||||||||||||||    
T  887427 aaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattt 887500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 13056396 - 13056325
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||||||| ||||||    
T  13056396 ataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaattt 13056325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 12442831 - 12442897
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  12442831 taagcttttaggtattattcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 2790137 - 2790068
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  2790137 aagcttttatgcattattgataagcttgtcaaggtattttatgaataaacagcttatgaagatacaattt 2790068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 11776999 - 11777068
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  11776999 aaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagataca 11777068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 21788472 - 21788545
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||  ||||||||||| |||||    
T  21788472 aaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattt 21788545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 755810 - 755739
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaa-aaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||| ||||||| |||||||||||||||||    
T  755810 taagcttttatgtattattcagaagcttgttacggtagtttatgaaaaaaacagcttatgaagatacaattt 755739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 11072956 - 11073015
Alignment:
Q  154 aaacaaataagcttttatgtatt-attcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  11072956 aaacaaataagcttttttgtattcattcataagcttgtcaaggtagtttatgaaaaaaca 11073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 38216044 - 38216107
Alignment:
Q  168 ttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  38216044 ttatgtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatgaagatacaattt 38216107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 4090504 - 4090577
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||| ||||||||||||||| ||||||||||||||  |||||||||||| ||| |||||||||||||    
T  4090504 aaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaaaaaacagcttacgaagatacaattt 4090577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 33321499 - 33321419
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacag 213  Q
    ||||||||| | |||||||| |||  || |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  33321499 cttatgcaaaacaacttatgcaaat-aattaagtttttatgtattactcataagcttgtcaaggtagtttatgaaaaaacag 33321419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 43787874 - 43787801
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||||||||||||||||| |||||  |||||| |||||||||||||  |||||||||||||||||    
T  43787874 aaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaattt 43787801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 5516079 - 5516164
Alignment:
Q  146 cttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| |||||||||| ||||| ||||||||||| |||| || |||||||||| |||||||||||||| || |||||||||    
T  5516079 cttatgtaaaa-aaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaatacaattt 5516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 8832469 - 8832545
Alignment:
Q  158 aaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||||||||||| |||| |||  ||||||||||||    
T  8832469 aaataagcttttatgtattattaatcataagcttttcaaggtagtttatgaaaacacaggttagaaagatacaattt 8832545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 9140800 - 9140735
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagat 224  Q
    |||||| |||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||    
T  9140800 aaataaccttttatgtattat-cataaacttgtcaatgtagtttatgtaaaaacagtttatgaagat 9140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 34913461 - 34913407
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  34913461 aaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaaca 34913407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 39592271 - 39592337
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | || ||| ||||||| |||||    
T  39592271 cttttatgcattattcataagcttgtcaaggtagtttatgaaaataaagcttaagaagatataattt 39592337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 735991 - 736052
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| |||||||||| ||||| ||||||||||||| |||||||||||||| |||||    
T  735991 atgtattatttataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataattt 736052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 12683677 - 12683604
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||| |||||||||||||||||||||||  | | |||| |||||||||| |||||||||||||||||    
T  12683677 aaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaaacagcttatgaagatacaattt 12683604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 29133738 - 29133665
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| ||||||||||||||||||||| ||||||  || |||| || ||||||||||||| ||||||||||||    
T  29133738 aaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatacaattt 29133665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 29774760 - 29774833
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||||| ||||||||| || |||| |||||||||||||||||||| | ||||||| |||||||||    
T  29774760 aaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattt 29774833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 32366165 - 32366237
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||||||||||||||||| |||| ||||    
T  32366165 aaataagtttttatgtattatttataagttt-taaaggtagtttatgaaaaaacagtttatgaatatacgattt 32366237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 32522116 - 32522044
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||||||||||| |||||||||||||||    
T  32522116 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattt 32522044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 37409658 - 37409731
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||||||   || ||||||| |||||||||||||||||| |||||||| |||||||||    
T  37409658 aaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaatacaattt 37409731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 42839391 - 42839319
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||| |||| ||| |||||||||| ||||||    
T  42839391 aaataagtttttatgtattattcataagtttgtcaagttagtttatg-aaaaccagcttatgaagatgcaattt 42839319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 5903561 - 5903621
Alignment:
Q  171 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||||||||||||| |||||| |||||||||||  |||||||||||||||||    
T  5903561 tgtattactcataagcttgtcaaagtagttaatgaaaaaacatcttatgaagatacaattt 5903621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 13097906 - 13097998
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattatt-cataagcttgtcaaggtagtttatgaaaaaacagtttatgaaga 223  Q
    ||||||||| | | |||||| |||| ||| ||||||| |||||||||| |||||||||||||| || |||||||||||||||  |||||||||    
T  13097906 cttatgcaaaacagcttatggaaaaaaaaaaagctttgatgtattatttcataagcttgtcaaagttgtttatgaaaaaacaacttatgaaga 13097998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 12238554 - 12238484
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| || |||||||||| |||||||||| ||||||||||||||||||||   ||||||| |||||||||    
T  12238554 aaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaac---ttatgaacatacaattt 12238484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 15155815 - 15155901
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| |||| ||||| |||||||||||||||| |||| ||||| || | |||||||||||||||| |||| |||| ||||||||    
T  15155815 aacttatg-aaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaaggtacaattt 15155901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 4004834 - 4004907
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||||||| ||||||||||||| | || |||||||||||||| |||  |||||||| ||||||||    
T  4004834 aaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattt 4004907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 8343062 - 8342998
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||||||||||| ||| |||||| ||||| | ||||||||||||||||||    
T  8343062 ttttatgtattatt-ataagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattt 8342998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 12267020 - 12267085
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||||| ||||||||||| | |||||||||||||||| || ||||||||||| |||||    
T  12267020 ttttttgtattatttataagcttgtcgatgtagtttatgaaaaaataggttatgaagatataattt 12267085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 38471862 - 38471789
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||||| ||||  |||||||| |  | |||||||||||||||||||||||||||| ||||||||    
T  38471862 aaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaattt 38471789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 735909 - 735964
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagctt 188  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  735909 cttatgcaaaataacttgtgtaaa-caaataagcttttatgtattatttataagctt 735964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 16108178 - 16108120
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||| |||| |||||||||||||||||||||  ||||||| |||||||||    
T  16108178 tattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaattt 16108120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 23956315 - 23956262
Alignment:
Q  178 ttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| |||| || |||||||||| ||||||||||||| ||||||||||||    
T  23956315 ttcataagtttgtaaatgtagtttatggaaaaacagtttataaagatacaattt 23956262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 33321254 - 33321217
Alignment:
Q  229 tttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||||||||||||||||||||||||||||||| |||||    
T  33321254 tttacataagctcaaaaataagccaatccaaatgggcc 33321217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 42064881 - 42064933
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||||||| |||||||||||| |||||| |  |||||||||||    
T  42064881 tattattcataagcttgttaaggtagtttataaaaaaataacttatgaagata 42064933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 17317193 - 17317158
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgg 263  Q
    ||||||||||||||||||||||| ||||||||||||    
T  17317193 atttacataagctcaaaaataagtcaatccaaacgg 17317158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 17546414 - 17546456
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaa 208  Q
    |||||||||||||| ||| |||||||||||||||||| |||||    
T  17546414 ttttatgtattatttataggcttgtcaaggtagtttacgaaaa 17546456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 22422239 - 22422182
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagttt 216  Q
    ||||||| |||||| ||||||| ||||| || | |||||||||||||||||||||||||    
T  22422239 aaataagtttttatatattatttataagttttt-aaggtagtttatgaaaaaacagttt 22422182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 43796944 - 43796910
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacg 262  Q
    |||||||||||||| ||||||||||||||||||||    
T  43796944 atttacataagctctaaaataagccaatccaaacg 43796910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 1120325 - 1120354
Alignment:
Q  183 aagcttgtcaaggtagtttatgaaaaaaca 212  Q
    ||||||||||||||||||||||||||||||    
T  1120325 aagcttgtcaaggtagtttatgaaaaaaca 1120354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 4016070 - 4016034
Alignment:
Q  232 acataagctcaaaaataagccaatccaaacgggcctat 269  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4016070 acataagctcaaaa-taagccaatccaaacgggcctat 4016034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 9140682 - 9140649
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||||||||||||||||| |||||||||||||||    
T  9140682 cataagctcaaaaataagtcaatccaaacgggcc 9140649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 262
Target Start/End: Original strand, 12223984 - 12224013
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacg 262  Q
    ||||||||||||||||||||||||||||||    
T  12223984 cataagctcaaaaataagccaatccaaacg 12224013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 13097911 - 13097878
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||||||||| ||||    
T  13097911 cataagctcaaaaataagccaatccaaacaggcc 13097878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 19683574 - 19683660
Alignment:
Q  142 ataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||  |||| || |||||||||||||  ||||| || | ||| |||||||||||||| | |||||||||||||||||||    
T  19683574 ataacttatgtaaat-aaatgagtttttatgtattatatataagtttataaag-tagtttatgaaaaacc-gtttatgaagatacaattt 19683660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 24439046 - 24439107
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| |||| ||||| | |||||||||||||||||||  |||| || |||||||||    
T  24439046 atgtattatttataatcttgttacggtagtttatgaaaaaacaacttataaacatacaattt 24439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 27881058 - 27881005
Alignment:
Q  168 ttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaa 221  Q
    |||||||||||| ||||| || | ||||||| ||||||||||||| ||||||||    
T  27881058 ttatgtattatttataagtttattaaggtagcttatgaaaaaacaatttatgaa 27881005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 41554651 - 41554602
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 207  Q
    |||||| ||||||||||||||||||||  |||| || |||||||||||||    
T  41554651 aaataaacttttatgtattattcataaatttgttaaagtagtttatgaaa 41554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 27243607 - 27243575
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtc 191  Q
    |||||||||||| ||||||||||||||||||||    
T  27243607 aataagcttttacgtattattcataagcttgtc 27243575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 35731153 - 35731189
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaag 194  Q
    ||||||||||||||||||||||||| || ||||||||    
T  35731153 aaataagcttttatgtattattcatgagtttgtcaag 35731189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 37409791 - 37409823
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggc 265  Q
    ||||||||||||||||||||| |||||||||||    
T  37409791 cataagctcaaaaataagccagtccaaacgggc 37409823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 37420034 - 37419987
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    |||||||||||||||| | ||||||||  ||||||||||||||||||||    
T  37420034 aaataagcttttatgt-taattcataattttgtcaaggtagtttatgaa 37419987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 38216018 - 38215986
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggc 265  Q
    |||||||||||||||||| ||||||||||||||    
T  38216018 cataagctcaaaaataagtcaatccaaacgggc 38215986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 45163961 - 45163885
Alignment:
Q  154 aaacaaataagcttttatgtat-tattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    ||||||||||||||||||  |  ||||||||||||||| || ||| ||||| ||||||||  ||| |||||||||||    
T  45163961 aaacaaataagcttttattaaactattcataagcttgtgaatgtaatttataaaaaaacaacttaggaagatacaat 45163885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 7267786 - 7267863
Alignment:
Q  154 aaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||    
T  7267786 aaacaaataagcttttatgtattattcataagcttgccaaggtagtttatgaaaaaacaacttatgaaggtacaattt 7267863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 2255749 - 2255822
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  2255749 aaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaattt 2255822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 21025298 - 21025227
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  21025298 aaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaat 21025227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 24625866 - 24625937
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||  || |||||||||||||||    
T  24625866 aaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaaaattagcttatgaagatacaat 24625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 8014806 - 8014876
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  8014806 taagcttttattcattattcataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattt 8014876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 2034300 - 2034227
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  |||  ||||||||||||    
T  2034300 aaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattt 2034227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 29052348 - 29052420
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatt 230  Q
    |||||| ||||||||||||||| ||||| |||| |||||| |||||||||||||||||||||| |||||||||    
T  29052348 aaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaatt 29052420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 13429488 - 13429543
Alignment:
Q  176 tattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaattt 13429543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 1240682 - 1240608
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||||||||  |||||||||||| ||||    
T  1240682 aaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaaacaacttatgaagatacgattt 1240608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 2027247 - 2027177
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||||||||||| |||||||| ||| ||||||||  ||||||||||||||||| ||||||||||||||    
T  2027247 aaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaa 2027177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 10874001 - 10874072
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||  |||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  10874001 aaataagcttttat--attattaataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaattt 10874072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 25430819 - 25430763
Alignment:
Q  176 tattcataagcttgtcaaggtagtttatgaa-aaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  25430819 tattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattt 25430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 34509931 - 34509999
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatt 230  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| |||| |||||||||||||| ||||    
T  34509931 aagcttttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagatataatt 34509999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 10755351 - 10755288
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaa 221  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||||| || |||||||    
T  10755351 aaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa 10755288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 16589774 - 16589833
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  16589774 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagata 16589833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 16605606 - 16605547
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  16605606 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagata 16605547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 3211072 - 3210994
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-----aaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||     ||||||||| |||||||||||||||||    
T  3211072 aaataagcttttatgtattactgataagcttgtcaatgtagtttatgaagaaaaaaaacagcttatgaagatacaattt 3210994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 10054396 - 10054467
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||||| | |||||  |||||||||||    
T  10054396 aaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaataatttat--agatacaattt 10054467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 32165336 - 32165259
Alignment:
Q  153 aaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||| |||||||||||||| ||||  || | ||| ||||||||||||||||||||||||||||||||||||    
T  32165336 aaaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattt 32165259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 21891409 - 21891336
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||| || ||||||||||||||||||||| ||||||||||||| ||||  ||||||||||| |||||    
T  21891409 aaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagatagaattt 21891336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 32675960 - 32675887
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||||||||||||||   ||||| ||||||||||||| |  |||||||||||||||||    
T  32675960 aaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattt 32675887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 6958649 - 6958712
Alignment:
Q  168 ttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| |||||||||||| |||||||||||| ||||||| ||| || ||||||||||||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaagcagcttgtgaagatacaattt 6958712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 30533995 - 30534046
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  30533995 aaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaa 30534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 6776823 - 6776893
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||||||||||||| || ||| ||||||||||| ||||||||||||| ||||| |  ||||||||||||||    
T  6776823 aaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaa 6776893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 18078318 - 18078244
Alignment:
Q  157 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||  |||||| |||| |||||||| ||||||| ||| |||||||||||||||||||| |||||| |||||    
T  18078318 caaataaatttttatttatttttcataagtttgtcaatgtattttatgaaaaaacagtttataaagatataattt 18078244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 6758617 - 6758693
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    ||||||||| | |||||||| |||  |||||||||||| | |||||| ||||||||||| ||||||||||||||||||    
T  6758617 cttatgcaaaacaacttatgcaaat-aaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaa 6758693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 7446933 - 7446860
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| |||||| |||||||||| ||| ||||| |||||| ||| ||||  |||||||||||||||||    
T  7446933 aaataagctttaatgtatcattcataagcctgttaaggttgtttataaaacaacaacttatgaagatacaattt 7446860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 10184400 - 10184328
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||| ||||||| ||||| || | ||||||||||||||||||||| |||||||||| |||||||    
T  10184400 aaataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaacaatttatgaagaaacaattt 10184328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 34413342 - 34413407
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| |||| || |||||||||||||||||| ||||| || |||||||||    
T  34413342 ttttatgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaattt 34413407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 6632674 - 6632738
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaag 222  Q
    ||||| |||||||||||||||| |||| ||||| || ||||||||||||||||||  ||||||||    
T  6632674 aaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaacttatgaag 6632738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 21610111 - 21610047
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||| |||||||||| || |||||||||||||||| |||||||||| ||| |||||    
T  21610111 tttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataattt 21610047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 4808599 - 4808657
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    |||||||||| ||||| || | ||| ||||||||||||||||||||||||||||||||||    
T  4808599 atgtattatttataagttttt-aagatagtttatgaaaaaacagtttatgaagatacaat 4808657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 9202473 - 9202397
Alignment:
Q  159 aataagcttttatgtattattcataagcttgt----caaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||  ||||||| |||||||||||    ||||| |||||||||||||||||  ||||||||||||||||    
T  9202473 aataagcttttccgtattatacataagcttgtaactcaaggcagtttatgaaaaaacagcatatgaagatacaattt 9202397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 10730303 - 10730252
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttat 218  Q
    ||||||||||||| |||| ||||| || ||||||||||||||||||||||||    
T  10730303 tttatgtattatttataaacttgttaatgtagtttatgaaaaaacagtttat 10730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 12817163 - 12817116
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatga 205  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  12817163 aaataagctttaatgtattattcataagctagtcaatgtagtttatga 12817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 991354 - 991280
Alignment:
Q  158 aaataagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||| ||||  ||||| ||||||||  |||||||| ||||||| || |||||||||||||||    
T  991354 aaataagcttttatgtaatattagataagtttgtcaagtcagtttatggaaaaacaattgatgaagatacaattt 991280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 2040282 - 2040209
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    ||||||||| | ||||||| ||||  |||||||||||||| ||||||||||||| |||| |||||| ||||||||    
T  2040282 cttatgcaaaacaacttatataaat-aaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 23239262 - 23239332
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||||||||||||| |||||||||||||||||| || || |||||| ||||| ||  |||||| |||||||    
T  23239262 aaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgatacaa 23239332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 7576916 - 7576859
Alignment:
Q  174 attattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||| ||  || ||||| ||||||||||||||||||||| |||||    
T  7576916 attattcataagcttgttaacataatttataaaaaaacagtttatgaagatataattt 7576859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 32615485 - 32615413
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | ||||||||| ||||||||||  ||||||||||||||||||    
T  32615485 aaataagtttttatgtattatttataaattttt-aaggtagttgatgaaaaaactatttatgaagatacaattt 32615413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 9894781 - 9894833
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||| ||||||||||||||| ||||| |||| |||||| ||||||||||||    
T  9894781 aaataatcttttatgtattatttataagtttgttaaggtattttatgaaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 15054654 - 15054583
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| ||| |||||||| | ||||| |||| || ||| ||||||||||| || ||||||||||||||||||    
T  15054654 ataagttttcatgtattagttataagtttgtaaaagtattttatgaaaaagcaatttatgaagatacaattt 15054583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 16989824 - 16989765
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||||||||||||||   |||| || ||| |||| ||||||||||||||||||||||    
T  16989824 ttttatgtattattcatatatttgtgaaagtattttaagaaaaaacagtttatgaagata 16989765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 34223609 - 34223523
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| |||| ||||||| |||||||| ||||| ||||| ||||  |  || | ||| |||||||||||||||||||||||||||    
T  34223609 aacttatg-aaaataaataagtttttatgtgttatttataagtttgtttatatattctataaaaaaacagtttatgaagatacaattt 34223523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 2034301 - 2034339
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  2034301 atttgcataagctcaaaaacaagccaatccaaacgggcc 2034339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 10619254 - 10619312
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||||||  |||| |||| |||||||||||||||||||||  ||||||| ||||||    
T  10619254 atgtattatttgtaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaa 10619312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 10687322 - 10687398
Alignment:
Q  158 aaataagcttttatgtatt---attcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| |||||||   |||||||||| | | ||||||||||||| |||||||  ||||| |||||||||||    
T  10687322 aaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagatacaattt 10687398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 1468191 - 1468254
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaaga 223  Q
    ||||||| |||||||||||||| || || || | ||||||||||||| ||||||||||||||||||    
T  1468191 aaataagtttttatgtattatttat-aggtttttaaggtagtttatg-aaaaacagtttatgaaga 1468254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 3829990 - 3829917
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||| | ||||||||||  || | | |||||||||||||||||||  ||||||||||| |||||    
T  3829990 aaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaaattt 3829917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 4272405 - 4272470
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||| || | || ||||||||| |||||||| ||||| |||| |||||||    
T  4272405 ttttatgtattatacataagtttataaatgtagtttataaaaaaacaatttataaagaaacaattt 4272470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 5958404 - 5958343
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||||||| ||| | ||||| | |||||||||||||||| ||||||| || |||||    
T  5958404 ttttatgtattatttatatgtttgtcgatgtagtttatgaaaaaatagtttataaaaataca 5958343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Original strand, 6805770 - 6805799
Alignment:
Q  186 cttgtcaaggtagtttatgaaaaaacagtt 215  Q
    ||||||||||||||||||||||||||||||    
T  6805770 cttgtcaaggtagtttatgaaaaaacagtt 6805799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 8011122 - 8011065
Alignment:
Q  153 aaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||| |||||||| || || ||||||| ||||| ||||||||||||||| ||||||||    
T  8011122 aaaataaataagcattaatatattatttataagtttgtcaaggtagtttttgaaaaaa 8011065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 17914969 - 17915033
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | |||||||||||||||||||  | ||||||| |||||||||    
T  17914969 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattt 17915033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 22816656 - 22816583
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||||||| |||||||||| || | ||  || |||||||||||||||||||| |  |||||||||    
T  22816656 aaataagtttttatgtaatattcataagtttttaaatataatttatgaaaaaacagtttataagtatacaattt 22816583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 29623573 - 29623485
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaa 221  Q
    ||||||||| | |||||||| |||  |||||| ||||||| ||||||| || || |||| || ||||||||||||||||||  |||||||    
T  29623573 cttatgcaaaacaacttatgcaaat-aaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaa 29623485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 8011135 - 8011167
Alignment:
Q  231 tacataagctcaaaaataagccaatccaaacgg 263  Q
    ||||||||||| |||||||||||||||||||||    
T  8011135 tacataagctctaaaataagccaatccaaacgg 8011167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 21871347 - 21871308
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttatga 205  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  21871347 cttttatgtattattgataa-cttgtcaaggtagtttatga 21871308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 25430850 - 25430882
Alignment:
Q  229 tttacataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||| ||||||||||    
T  25430850 tttacataagctcaaaaataagtcaatccaaac 25430882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 17222852 - 17222917
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattt 17222917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 28074380 - 28074452
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  28074380 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattt 28074452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 7148787 - 7148860
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  7148787 aaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattt 7148860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 29877654 - 29877727
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  29877654 aaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaattt 29877727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 48591495 - 48591422
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  48591495 aaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 48591422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 948062 - 948161
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaatt 230  Q
    ||||||||| ||| |||||| |||| |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||| |||||||||||    
T  948062 cttatgcaaaatagcttatg-aaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaaaaaacagcttataaagatacaatt 948160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 23335665 - 23335737
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatttacataag 238  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  23335665 ttttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcataag 23335737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 35124404 - 35124472
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35124404 ataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaa 35124472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 27368252 - 27368151
Alignment:
Q  128 tgaacttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||| || | |||||||| |||  |||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||| ||||||||    
T  27368252 tgaacttatgtaaaacaacttatgcaaat-aaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagataca 27368154  T
Q  228 att 230  Q
    |||    
T  27368153 att 27368151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 18424348 - 18424276
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  18424348 aaataagcttttatgtattattcataaacttgtgaaggtagtttatga-aaaacaatttatgaagatacaattt 18424276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 23297428 - 23297523
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| ||| |||||| |||  |||||||||||||||||||||||||||| ||||||||||||||||||   |||||| |||||||||||||||||    
T  23297428 cttatgcaaaatagcttatgcaaat-aaataagcttttatgtattattcataagtttgtcaaggtagtttatg---aaacagcttatgaagatacaattt 23297523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 36740919 - 36740992
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  36740919 aaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattt 36740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 52274191 - 52274118
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  52274191 aaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattt 52274118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 43699554 - 43699479
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacag--tttatgaagatacaattt 231  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||   |||||||||||||||||    
T  43699554 aaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaacagctcttatgaagatacaattt 43699479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 46704340 - 46704268
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  46704340 aataagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaattt 46704268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 12495717 - 12495644
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | || ||||||||||    
T  12495717 aaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaat 12495644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 896985 - 897058
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||| | |||||| ||||    
T  896985 aaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattt 897058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 8057184 - 8057088
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    |||||| || |||||| ||| |||| ||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||    
T  8057184 cttatgaaaaataactaatgcaaaa-aaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaagatacaat 8057088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 21216391 - 21216326
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||||    
T  21216391 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaattt 21216326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 32628793 - 32628866
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||||    
T  32628793 aaataagcttttttgtgttattcataagcttgtcgaggtaatttatgaaaaaacagcttgtgaagatacaattt 32628866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 38345892 - 38345820
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||  |||||||||||||||||    
T  38345892 aaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaattt 38345820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 39932825 - 39932752
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| ||||||||||||||| ||||| |||| |||||||| |||||||||||| ||||||||||||||||||    
T  39932825 aaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaattt 39932752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 41228918 - 41228991
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||  | |||||||||||||||    
T  41228918 aaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaattt 41228991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 2494469 - 2494398
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  2494469 ataagcttttacatattatttataagcttgtaaaggtagtttatgaaaaaatagtttatgaagataccattt 2494398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 28663606 - 28663661
Alignment:
Q  176 tattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattt 28663661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 55638148 - 55638081
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||| ||||||||||    
T  55638148 aagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaat 55638081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 488452 - 488382
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  | || | ||||||||||||    
T  488452 taagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaattt 488382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 213043 - 212952
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||||| | |||||||| |||  ||||||| |||||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  213043 cttatgcaaaacaacttatgcaaat-aaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagata 212952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 4603402 - 4603330
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | ||||||||||||||||||||||||||||||||||||||||    
T  4603402 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattt 4603330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 1374459 - 1374360
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-cagtttatgaagatacaatt 230  Q
    ||||||||| | |||||||| |||  ||| ||| ||||||| || |||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  1374459 cttatgcaaaaaaacttatgcaaataaaa-aagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaaccagcttatgaagatacaatt 1374361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 36255094 - 36255034
Alignment:
Q  171 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  36255094 tgtattgttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattt 36255034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 42611964 - 42611870
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttt-tatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||||| | |||||||| |||  ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||  |||||||||||||    
T  42611964 cttatgcaaaacaacttatgcaaat-aaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagataca 42611870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 2405205 - 2405275
Alignment:
Q  160 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||||||| || ||||| |||||||||||    
T  2405205 ataagctattatgtattatt-ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaattt 2405275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 52700628 - 52700542
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||  |||||||  ||||||||||||| |||||||||| || || ||||||||||||| ||||||||||||||| ||||    
T  52700628 aacttatgtaaat-aaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatgaagatacgattt 52700542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 18630961 - 18630899
Alignment:
Q  163 agcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||||| |||||| ||| ||||||| |||||||||||||||||||||| |||||||||||    
T  18630961 agcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagata 18630899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 35010226 - 35010296
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||| |||||||||||||| ||||| ||||||| ||||||||||| |||| ||||||| |||||||||    
T  35010226 aaataagtttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaa 35010296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 45018537 - 45018619
Alignment:
Q  147 ttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    ||||| |||| ||||||| |||||| |||||||||| || |||| || ||||||||||||||||||  |||||||||||||||    
T  45018537 ttatgcaaaaaaaataagattttatttattattcatgagattgttaaagtagtttatgaaaaaacaacttatgaagatacaat 45018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 825697 - 825766
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||||| | |||||||||||||| |||| || |||||||||||||||||| | |||||||||||    
T  825697 aaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaagataca 825766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 2141656 - 2141729
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||| ||||| ||||  |||| ||||||  |||| |||||||||||||||||||||||||||    
T  2141656 aaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaagatacaattt 2141729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 3564210 - 3564286
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    ||||||||| | | |||||| |||| |||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  3564210 cttatgcaaaacagcttatg-aaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaaaa 3564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 4331352 - 4331405
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaac 211  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  4331352 aaataagcttttatttattattcataactttgtcaaggtagtttatgaaaaaac 4331405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 8601216 - 8601289
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||| | ||||||| |||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  8601216 aaatgagcttttttctattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaattt 8601289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 15184562 - 15184634
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | ||| ||||||||||||||||||||||||||||||||||||    
T  15184562 aaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattt 15184634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 19725316 - 19725381
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| |||| |||||| |||||||||||||||| |||||||||| |||||    
T  19725316 ttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatgaagatataattt 19725381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 46176049 - 46175977
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | ||||||||||||||||||| ||||||||||||||||||||    
T  46176049 aaataagtttttatgtattatttataaattttt-aaggtagtttatgaaaaaatagtttatgaagatacaattt 46175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 30956697 - 30956764
Alignment:
Q  158 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagat 224  Q
    |||||||||||| |||||||| ||| |||||| |||||||||||||||||||||| ||||| ||||||    
T  30956697 aaataagctttttatgtattactcacaagcttctcaaggtagtttatgaaaaaacggtttacgaagat 30956764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 43415360 - 43415293
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||| |||||||||||||||||||| |||| || |||||||| ||||||||| ||||| ||||||    
T  43415360 aaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaagata 43415293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 7206656 - 7206590
Alignment:
Q  159 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||||||||| |||||||||  ||| ||| |||||||||||||||||||||  |||||||||||    
T  7206656 aataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagata 7206590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 26206416 - 26206362
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaa 221  Q
    ||||||||||||| ||||| |||| || |||||||||||||||||||||||||||    
T  26206416 tttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaa 26206362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 29997375 - 29997329
Alignment:
Q  164 gcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29997375 gcttttatatattattcataagcttatcaaggtagtttatgaaaaaa 29997329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 43740151 - 43740074
Alignment:
Q  153 aaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||| |||||  |||||||||||| |||||| | ||| ||||||||||| |||||||||||||||||||||    
T  43740151 aaaataaataagtttttacatattattcataaacttgtctaagtaatttatgaaaaa-cagtttatgaagatacaattt 43740074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 10794980 - 10794908
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| | ||||| || ||||| |||||||| |||| ||||||||||||||||||||    
T  10794980 aaataagtttttatgtattatttaaaagctcgttaaggtggtttatga-aaaatagtttatgaagatacaattt 10794908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 46650286 - 46650359
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| |||||||||||||||  |||| |  |||||||||||||||| ||||||| |||| |||||||    
T  46650286 aaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattt 46650359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 35405708 - 35405772
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| | ||| |||||||||  ||||||||||||||||| ||||||||||| |||||    
T  35405708 tttatgtattatacttaatcttgtcaagacagtttatgaaaaaacagcttatgaagatagaattt 35405772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 7148786 - 7148747
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcct 267  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  7148786 atttgcataagctcaaaaataagccaatccaaacgggcct 7148747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 8130503 - 8130558
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacag 213  Q
    ||||||||||||||| |||||||||||| |||||| ||||| ||||||| ||||||    
T  8130503 aaataagcttttatgcattattcataagtttgtcagggtagcttatgaacaaacag 8130558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 10796376 - 10796473
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| | ||||| ||||||  ||||||| |||||||||||||| | ||||| || ||| | ||||||| ||||| ||||||||||||||||||||    
T  10796376 cttatgcaaaacaacttgtgtaaat-aaataagtttttatgtattatttaaaagctcgttaagatggtttatg-aaaaatagtttatgaagatacaattt 10796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 22273830 - 22273868
Alignment:
Q  193 aggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaattt 22273868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 2548118 - 2548045
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||| | |||||||| ||| | | ||| ||||||||||||||||| |||||||||||| |||||    
T  2548118 aaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagataaaattt 2548045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 22397364 - 22397303
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| |||||  ||| |||||||||||||||||||||  ||||||| |||||||||    
T  22397364 atgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattt 22397303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 29615389 - 29615438
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 207  Q
    |||||||||| ||||||||||||||||||||||   ||||||||||||||    
T  29615389 aaataagcttatatgtattattcataagcttgtagtggtagtttatgaaa 29615438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 33533957 - 33533998
Alignment:
Q  172 gtattattcataagcttgtcaaggtagtttatgaaaaaacag 213  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  33533957 gtattattcataagttagtcaaggtagtttatgaaaaaacag 33533998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 39931602 - 39931542
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  39931602 atgtattatttacaagctttt-aaggtagtttatgaaaaaaccatttatgaagatacaattt 39931542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 42153104 - 42153067
Alignment:
Q  229 tttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  42153104 tttacgtaagctcaaaaataagccaatccaaacgggcc 42153067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 47202841 - 47202913
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||| | ||||  || | ||||||||||||||||||||  ||||||||||||||||||    
T  47202841 aaataagtttttatgtattacttataaattttt-aaggtagtttatgaaaaaaccatttatgaagatacaattt 47202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 48686964 - 48687009
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttat 203  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||    
T  48686964 aaataagtttttatgtactattcataagcttgtcaacgtagtttat 48687009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 9319100 - 9319136
Alignment:
Q  195 gtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||| ||||||||    
T  9319100 gtagtttatgaaaaaacagtttatgaagctacaattt 9319136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 40699393 - 40699425
Alignment:
Q  180 cataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||||||||||||||||||||||    
T  40699393 cataagcttgtcaaggtagtttatgaaaaaaca 40699425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 43699574 - 43699606
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggc 265  Q
    |||||||||||||||||||||||||||||||||    
T  43699574 cataagctcaaaaataagccaatccaaacgggc 43699606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 42617292 - 42617234
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||| |||||||| ||||| || | ||||||||||||||||||| ||||||||||||||    
T  42617292 ttttaagtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagata 42617234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 9201666 - 9201731
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagat 224  Q
    ||||||| |||||||||||||| ||||| || ||||| || |||||| |||||||| ||||||||||    
T  9201666 aaataagtttttatgtattatttataag-ttttcaagctattttatggaaaaacaggttatgaagat 9201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 9319177 - 9319215
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  9319177 atttacataagctaaaaaataagccaaaccaaacgggcc 9319215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 264
Target Start/End: Complemental strand, 38345760 - 38345730
Alignment:
Q  234 ataagctcaaaaataagccaatccaaacggg 264  Q
    |||||||||||||||||||||||||||||||    
T  38345760 ataagctcaaaaataagccaatccaaacggg 38345730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 11298611 - 11298656
Alignment:
Q  161 taagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    ||||||||||| |||||||||| ||||| | |||||||||||||||    
T  11298611 taagcttttatttattattcatgagcttcttaaggtagtttatgaa 11298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 22303111 - 22303183
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| ||||  || | | | ||||||||||||||||  ||||||||||||||||||    
T  22303111 aaataagtttttatgtattatttataaattttttacg-tagtttatgaaaaaaccatttatgaagatacaattt 22303183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 23297433 - 23297400
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||||||||| ||||    
T  23297433 cataagctcaaaaataagccaatccaaacaggcc 23297400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 29877634 - 29877601
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||||||||| ||||    
T  29877634 cataagctcaaaaataagccaatccaaacaggcc 29877601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 34633394 - 34633361
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    |||||||| |||||||||||||||||||||||||    
T  34633394 cataagctaaaaaataagccaatccaaacgggcc 34633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 9153678 - 9153580
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-cagtttatgaagatacaatt 230  Q
    ||||||||| | |||||||||||| ||| || | | |||||||||||| |||||||||| || |  ||||||||||||| |||||||| || ||||||||    
T  9153678 cttatgcaaaacaacttatgtaaatcaattatg-tattatgtattatt-ataagcttgtaaacgaggtttatgaaaaaaacagtttattaaaatacaatt 9153581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Original strand, 17222977 - 17223005
Alignment:
Q  233 cataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||||||||||    
T  17222977 cataagctcaaaaataagccaatccaaac 17223005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 42153245 - 42153193
Alignment:
Q  175 ttattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||| |||||||||| ||||||||||| ||||| || || ||||||||||    
T  42153245 ttattcagaagcttgtcatggtagtttatgtaaaaatagcttctgaagataca 42153193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 52274192 - 52274232
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaacgggccta 268  Q
    |||| ||||||||||||||||||||||| ||||| ||||||    
T  52274192 atttgcataagctcaaaaataagccaattcaaacaggccta 52274232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 29378660 - 29378733
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||||    
T  29378660 aaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattt 29378733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 47511058 - 47511131
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||    
T  47511058 aaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattt 47511131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 30181569 - 30181633
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatac 226  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  30181569 aagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatac 30181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 20888588 - 20888662
Alignment:
Q  158 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  20888588 aaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattt 20888662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 14691366 - 14691297
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||    
T  14691366 aagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattt 14691297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 44613544 - 44613471
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||  |||||| ||||||||||    
T  44613544 aaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgatacaattt 44613471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 21027588 - 21027511
Alignment:
Q  154 aaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| |||||||||||||| ||||| || | ||||| ||||||||||||||||||| ||||||||||||||    
T  21027588 aaacaaataagtttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaattt 21027511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 14536905 - 14536964
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagata 14536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 6406939 - 6406870
Alignment:
Q  162 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||| |||||||  | ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  6406939 aagcttttatgcattattctaaggcttgtcaaggtagtttatgaaaaaacagcttatgaagatgcaattt 6406870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 22575609 - 22575674
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| |||| ||| || |||||||||||||||||||||||||||||||||    
T  22575609 ttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaattt 22575674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 29390621 - 29390549
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||||    
T  29390621 aaataatctttgatgtattattcataagcttgtaaaggtagtttatga-aaaacaacttatgaagatacaattt 29390549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 14676021 - 14675958
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  14676021 tttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattt 14675958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 34922946 - 34922998
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  34922946 aaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaa 34922998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 23356575 - 23356489
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| |||| |||||||  ||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  23356575 aacttatg-aaaataaataaggctttttgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactattt 23356489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 41094233 - 41094304
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||  |  |||||||||||||||||    
T  41094233 aaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattt 41094304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 41677397 - 41677463
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-cagtttatgaagatacaattt 231  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||| |||||||||||||||||    
T  41677397 ttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattt 41677463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 48895311 - 48895389
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-----aaaaaacagtttatgaagatacaattt 231  Q
    |||||||| || || |||||||||||||||| |||||||||||||||     |||||||||||||||||||||||||||    
T  48895311 aaataagcattcatatattattcataagcttatcaaggtagtttatgagacaaaaaaacagtttatgaagatacaattt 48895389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 16958839 - 16958903
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | |||||||||||||||||||| |||||||||||||||||||    
T  16958839 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattt 16958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 22032785 - 22032850
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| |||||| ||| || |||||||||||||||||| ||||||||| ||||||||    
T  22032785 ttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaattt 22032850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 23119991 - 23119918
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| |||| | |||||||||||||| ||||||| |||||||| |||| |||||||| ||||||||||||||    
T  23119991 aaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgtgaagatacaattt 23119918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 38372573 - 38372646
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||| | | ||||| |||||||    
T  38372573 aaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaacaattt 38372646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 47654473 - 47654412
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||  |||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  47654473 atgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattt 47654412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 17944686 - 17944745
Alignment:
Q  176 tattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaatttacat 235  Q
    ||||||||||||||||||||||||||||  |||||||  |||||||||||||| ||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaaattacat 17944745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 39279458 - 39279517
Alignment:
Q  172 gtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||||||||| ||||| |||||||||||| ||| ||| |||||||||||||    
T  39279458 gtattattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattt 39279517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 40629479 - 40629440
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40629479 tttatgtattattcataagcttgtcaaggtagtttatgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 43391723 - 43391809
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||  |||||| ||| | | ||||||||||||| |||| ||||||||||||||||||| | |||||||||||| |||||    
T  43391723 aacttatgtaaat-aaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataattt 43391809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 7098171 - 7098118
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaac 211  Q
    ||||||| ||||||| |||||||||||| |||||||| ||||||||||||||||    
T  7098171 aaataagattttatgaattattcataagtttgtcaagatagtttatgaaaaaac 7098118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 16932992 - 16932928
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||  ||||||||||||||||||    
T  16932992 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattt 16932928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 16938375 - 16938311
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||  ||||||||||||||||||    
T  16938375 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattt 16938311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 23137237 - 23137161
Alignment:
Q  154 aaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||  |||||||||||||| ||||| || | ||||||||||||| |||||  |||||||||||||||||||    
T  23137237 aaacaaataaatttttatgtattatttataagttttt-aaggtagtttatgtaaaaatcgtttatgaagatacaattt 23137161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 35809105 - 35809178
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| || |||||||||| |||||||||| || ||||||||||||||||||  ||| ||| |||||||||    
T  35809105 aaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaatatacaattt 35809178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 41037768 - 41037819
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  41037768 aaataagcttttatgtattattca-aagcttgtcaaggtaatttatgataaaa 41037819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 46743965 - 46744041
Alignment:
Q  158 aaataagcttttatgtattatt----cataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||||||||||||    ||||||||||||| ||||||| ||||||||||||  ||||||||||||||||    
T  46743965 aaataagattttatgtattatttatccataagcttgtca-ggtagttaatgaaaaaacagcatatgaagatacaattt 46744041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 1054139 - 1054056
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-cagtttatgaagatacaatttacataagct 240  Q
    |||||||||||||||||||||||| ||   | |||| ||||||||| |||||| ||| ||| ||||||||||||| ||||||||    
T  1054139 aaataagcttttatgtattattcaaaaaaatttcaatgtagtttataaaaaaaacagcttaggaagatacaattttcataagct 1054056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 31613725 - 31613682
Alignment:
Q  169 tatgtattattcataagcttgtcaaggtagtttatgaaaaaaca 212  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  31613725 tatgtattattcattagcttgtcaatgtagtttatgaaaaaaca 31613682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 43818941 - 43818886
Alignment:
Q  167 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaag 222  Q
    ||||||||||||| |||||||||| || ||  ||||||||||||||||||||||||    
T  43818941 tttatgtattatttataagcttgttaatgttatttatgaaaaaacagtttatgaag 43818886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 48021718 - 48021667
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    ||||||||| |||| |||||||||||||||||| || |||||||||||||||    
T  48021718 aaataagctcttatttattattcataagcttgttaaagtagtttatgaaaaa 48021667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 16012736 - 16012786
Alignment:
Q  181 ataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||||||||| ||||||||||||||||| | || ||||||||||||||    
T  16012736 ataagcttgtcaaagtagtttatgaaaaaactgcttctgaagatacaattt 16012786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 19308567 - 19308489
Alignment:
Q  153 aaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||  ||| |||||||||||||||| |||| | ||||||||||||||||  || |||||||||| ||||||    
T  19308567 aaaataaataaaatttcatgtattattcataagtttgttagggtagtttatgaaaaattagcttatgaagatccaattt 19308489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 28759924 - 28759859
Alignment:
Q  144 aacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||| |||| ||| ||| |||||| |||||||||||||||||| |||||||||||| ||||||    
T  28759924 aacttatgaaaaaaaaa-aagtttttatttattattcataagcttgttaaggtagtttataaaaaaa 28759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 991515 - 991583
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||| ||||||| |||||| ||||| || | ||||||||||||||||||||  ||||||||||||||    
T  991515 aaataagtttttatgcattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagataca 991583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 18855341 - 18855268
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||| ||||||| |||| |||  ||||||||||||| |||||||||| ||||| || ||||||||||| |||||    
T  18855341 aaatgagcttttttgtaatatgtataagcttgtcaatgtagtttatggaaaaatagattatgaagatataattt 18855268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 32917663 - 32917590
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||| |||||||||||| |||  || ||||| |||||||||  ||||||||||| |||||    
T  32917663 aaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataattt 32917590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 37779335 - 37779283
Alignment:
Q  178 ttcataagcttgtcaaggtagtttatgaa--aaaacagtttatgaagatacaa 228  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||| ||||||    
T  37779335 ttcataagcttgtcaaggtagtttatgaaaaaaaacagcttatgaaaatacaa 37779283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 48949769 - 48949802
Alignment:
Q  192 aaggtagtttatgaaaaaacagtttatgaagata 225  Q
    ||||||||||||||||||||||||||||||||||    
T  48949769 aaggtagtttatgaaaaaacagtttatgaagata 48949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 7774800 - 7774745
Alignment:
Q  175 ttattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| ||||| ||||||| ||| |||||||||||||| ||||||||||||||||||    
T  7774800 ttatttataagtttgtcaacgtactttatgaaaaaaca-tttatgaagatacaattt 7774745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 12473389 - 12473441
Alignment:
Q  179 tcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||| || |||||||||||||||||||||||| |||| |||||||    
T  12473389 tcataagtttgtaaatgtagtttatgaaaaaacagtttataaagaaacaattt 12473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 14593172 - 14593239
Alignment:
Q  167 tttatgtattattcata--agcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||  |||||||||| |||||||||| ||||||| | || ||||||||||||||    
T  14593172 tttatgtattattcatataagcttgtcaaagtagtttatgaaaaaaactgcttgtgaagatacaattt 14593239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 33288170 - 33288134
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaag 194  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33288170 aaataagcttttatgtattattcattagcttgtcaag 33288134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 39803010 - 39803112
Alignment:
Q  128 tgaacttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||| |||||||| |||| ||||| |||| |||| ||||||| | |||| || ||||| |||||||  | ||||||||||||| |  |||||||||||||    
T  39803010 tgaatttatgcaaaataaattatg-aaaataaatgagcttttttctattgtttataagtttgtcaacattgtttatgaaaaaataagttatgaagataca 39803108  T
Q  228 attt 231  Q
    ||||    
T  39803109 attt 39803112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 49104444 - 49104401
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 209  Q
    |||||||||||||||||||| || ||||||| ||||||||||||    
T  49104444 ttttatgtattattcataagtttatcaaggtggtttatgaaaaa 49104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 9024787 - 9024853
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaa-aacagtttatgaagatacaattt 231  Q
    |||||||||||||| ||| |  ||| || |||||||||||||| |||||||||||||| ||||||||    
T  9024787 ttttatgtattatttatacgtgtgttaatgtagtttatgaaaaaaacagtttatgaaggtacaattt 9024853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 12473196 - 12473253
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgt 190  Q
    ||||||||| | |||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  12473196 cttatgcaaaacaacttatgcaaa-caaataagtttttatgtattattcataagtttgt 12473253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 26331801 - 26331874
Alignment:
Q  132 cttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 206  Q
    ||||||||| ||| ||||||||||  |||||||||||| || |||  || ||||||||| |||||||||||||||    
T  26331801 cttatgcaaaatagcttatgtaaat-aaataagcttttctgcattgatcgtaagcttgttaaggtagtttatgaa 26331874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 28004599 - 28004668
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    ||||||| |||||||||||||| ||||  || | ||| ||||||||||||||||  |||||||||||||||    
T  28004599 aaataagtttttatgtattatttataatttttttaag-tagtttatgaaaaaaccatttatgaagatacaa 28004668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 35246687 - 35246757
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||| | ||| || | ||||||||||||||||||||  ||||||| ||||||||||    
T  35246687 aaataagtttttatgtattatttaaaagttttt-aaggtagtttatgaaaaaac--tttatgaggatacaattt 35246757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 1312129 - 1312197
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    ||||||| |||||| ||||||| ||||| || | |||| ||||||||||||||| ||||||||| |||||    
T  1312129 aaataagtttttatatattatttataagttttt-aaggcagtttatgaaaaaaccgtttatgaatataca 1312197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 14730019 - 14730052
Alignment:
Q  198 gtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||| |||||||||||||||||    
T  14730019 gtttatgaaaaaacagcttatgaagatacaattt 14730052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 15819567 - 15819530
Alignment:
Q  188 tgtcaaggtagtttatgaaaaaacagtttatgaagata 225  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  15819567 tgtcaaggtagtttatgaaaaaactgtttacgaagata 15819530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 19913945 - 19914025
Alignment:
Q  142 ataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaaga 223  Q
    ||||||||||||||  ||||||  ||||||||  |||| ||||  |||| || ||||||||||||||||| |||||||||||    
T  19913945 ataacttatgtaaat-aaataaatttttatgtgctatttataaatttgttaatgtagtttatgaaaaaacggtttatgaaga 19914025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 22319350 - 22319289
Alignment:
Q  170 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||| |||| ||  |||||||||||| ||||  ||||||| |||||||||    
T  22319350 atgtattattcataagtttgttaacatagtttatgaaacaacaacttatgaatatacaattt 22319289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 24414514 - 24414590
Alignment:
Q  133 ttatgcaacataacttatgtaaaacaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||| | || |||||||||  |||||| | |||||||||||| ||||||||||||||| ||| |||| ||||||    
T  24414514 ttatgcaaaaaaatttatgtaaat-aaataaacatttatgtattatccataagcttgtcaagatagcttataaaaaaa 24414590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 25908442 - 25908475
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||| ||||||||||||||||||||||||||||    
T  25908442 cataacctcaaaaataagccaatccaaacgggcc 25908475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 37465951 - 37465886
Alignment:
Q  165 cttttatgtattattcataagcttgtcaaggtagtttat-gaaaaaacagtttatgaagatacaat 229  Q
    ||||||| |||||||||||| ||||| ||| |||||||| |||||||||  |||| ||||||||||    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaat 37465886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 40629371 - 40629338
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||||||||| ||||    
T  40629371 cataagctcaaaaataagccaatccaaacaggcc 40629338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 40629507 - 40629540
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggcc 266  Q
    ||||||||||||||||||||||||||||| ||||    
T  40629507 cataagctcaaaaataagccaatccaaacaggcc 40629540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 47511057 - 47511024
Alignment:
Q  228 atttacataagctcaaaaataagccaatccaaac 261  Q
    |||| |||||||||||||||||||||||||||||    
T  47511057 atttgcataagctcaaaaataagccaatccaaac 47511024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 18837217 - 18837189
Alignment:
Q  233 cataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||||||||||    
T  18837217 cataagctcaaaaataagccaatccaaac 18837189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 18837237 - 18837289
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    |||||||||| | |||||||||||||||||||| |||||| || || ||||||    
T  18837237 aaataagcttatgtgtattattcataagcttgtaaaggtacttaataaaaaaa 18837289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 33288013 - 33287985
Alignment:
Q  233 cataagctcaaaaataagccaatccaaac 261  Q
    |||||||||||||||||||||||||||||    
T  33288013 cataagctcaaaaataagccaatccaaac 33287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 38372706 - 38372738
Alignment:
Q  233 cataagctcaaaaataagccaatccaaacgggc 265  Q
    ||||||||||||||||| |||||||||||||||    
T  38372706 cataagctcaaaaataacccaatccaaacgggc 38372738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 24760 - 24833
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaaaaacagtttatgaagatacaat 229  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | || ||||||||||    
T  24760 aaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaat 24833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 97277 - 97215
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatga 220  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  97277 aaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaacagcttatga 97215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 14817 - 14744
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||||||||| || | || ||||||||||||||| |||||||| || |||||||||    
T  14817 aaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattt 14744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 14925 - 14851
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-cagtttatgaagatacaattt 231  Q
    |||||||||||||||||| ||||||||| || | || |||||| ||||||||| |||||||| ||||||||||||    
T  14925 aaataagcttttatgtatcattcataagtttttaaatgtagttaatgaaaaaatcagtttataaagatacaattt 14851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 109063 - 108992
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||  |  |||||||||||||||||    
T  109063 aaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattt 108992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 178515 - 178589
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    |||||||||||||||||||||| ||||| || | |||||| |||||| |||||| ||||||||||||||||||||    
T  178515 aaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaatagtttatgaagatacaattt 178589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 58939 - 58866
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    |||||| | |||||||||||||| |||| ||||||| |||||||||||||||  | ||||||||||||||||||    
T  58939 aaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatacaattt 58866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 4080 - 4141
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatg 219  Q
    ||||||||||| |||||||||| |||||||||| ||| ||||||||||||||| || |||||    
T  4080 aaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatg 4141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 24455 - 24387
Alignment:
Q  163 agcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||| |||||||||||||||||||||||||||||||| || ||| ||||  ||| ||||||| |||||    
T  24455 agcttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatataattt 24387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 43887 - 43835
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 210  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  43887 aaataagtttttatgtattattcaaaagcttgtcgaggtagtttataaaaaaa 43835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 1073 - 1143
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||||||||||||| |||||| |||||| |||| |||||| |||||| ||||| |  ||||||||||||||    
T  1073 aaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaa 1143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 227721 - 227795
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaacagtttatgaagatacaattt 231  Q
    |||||||| || ||||| |||| ||||| |||| ||||||||||||| ||||||||| ||||||| |||||||||    
T  227721 aaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattt 227795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 242710 - 242638
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| |||||||||||||  ||||| || ||||| || |||||| |||||||| |||||||||||| ||||    
T  242710 aaataagtttttatgtattatatataagttt-tcaagctattttatggaaaaacaggttatgaagatacgattt 242638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 11371 - 11302
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagataca 227  Q
    |||||||||||||| |||||| ||| ||||||| |||||| |||||| ||||| |  |||||||||||||    
T  11371 aaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagataca 11302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 18189 - 18145
Alignment:
Q  169 tatgtattattcataagcttgtcaaggtagtttatgaaaaaacag 213  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||    
T  18189 tatgtattattcacaagcttgtaaaggtagtttctgaaaaaacag 18145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 142354 - 142422
Alignment:
Q  158 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatac 226  Q
    |||| |||||||||||||||||||||  ||| | || ||| ||||||||||||||  ||||||||||||    
T  142354 aaatgagcttttatgtattattcatatacttattaatgtaatttatgaaaaaacaaattatgaagatac 142422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 1324 - 1382
Alignment:
Q  173 tattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattt 231  Q
    ||||||| ||||| |||| |||||||||||||||||||||  |||| || |||||||||    
T  1324 tattatttataagtttgttaaggtagtttatgaaaaaacaagttataaatatacaattt 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 279054 - 278993
Alignment:
Q  166 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaa 228  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||  ||||| |||||||||    
T  279054 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttataaagatacaa 278993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University