View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15637_high_1 (Length: 623)

Name: NF15637_high_1
Description: NF15637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15637_high_1
NF15637_high_1
[»] chr4 (21 HSPs)
chr4 (101-590)||(1746930-1747419)
chr4 (378-463)||(35723373-35723457)
chr4 (142-339)||(6005809-6006005)
chr4 (384-428)||(40613443-40613487)
chr4 (389-428)||(8423740-8423779)
chr4 (370-428)||(20743300-20743358)
chr4 (378-428)||(36635311-36635361)
chr4 (409-469)||(44132627-44132685)
chr4 (384-428)||(7012059-7012103)
chr4 (384-462)||(22234880-22234957)
chr4 (384-428)||(23293008-23293052)
chr4 (390-461)||(38148716-38148785)
chr4 (378-428)||(903909-903959)
chr4 (390-428)||(22440622-22440660)
chr4 (389-426)||(23861455-23861492)
chr4 (392-433)||(30522932-30522973)
chr4 (392-428)||(16189710-16189746)
chr4 (378-414)||(17345451-17345487)
chr4 (378-426)||(20521873-20521921)
chr4 (384-428)||(24343500-24343544)
chr4 (394-426)||(34200295-34200327)
[»] chr7 (30 HSPs)
chr7 (378-461)||(32308107-32308188)
chr7 (384-462)||(19206043-19206119)
chr7 (378-469)||(6630895-6630984)
chr7 (384-428)||(29787391-29787435)
chr7 (385-462)||(30731031-30731104)
chr7 (378-427)||(11722121-11722170)
chr7 (388-455)||(5548673-5548738)
chr7 (378-452)||(20549778-20549850)
chr7 (378-448)||(22868029-22868097)
chr7 (386-428)||(23191891-23191933)
chr7 (378-428)||(26733291-26733341)
chr7 (378-428)||(27945028-27945078)
chr7 (379-455)||(22602707-22602781)
chr7 (384-468)||(24339635-24339717)
chr7 (384-425)||(28155563-28155604)
chr7 (384-428)||(24289813-24289857)
chr7 (384-428)||(25481895-25481939)
chr7 (378-424)||(10042924-10042970)
chr7 (378-455)||(21828402-21828477)
chr7 (378-428)||(22484012-22484062)
chr7 (390-428)||(32287485-32287523)
chr7 (378-423)||(25791640-25791685)
chr7 (378-462)||(26329372-26329454)
chr7 (399-467)||(35297657-35297723)
chr7 (377-426)||(35861950-35861999)
chr7 (384-420)||(1433447-1433483)
chr7 (396-428)||(2424619-2424651)
chr7 (384-424)||(2425759-2425799)
chr7 (384-424)||(5307253-5307293)
chr7 (384-467)||(23128646-23128727)
[»] chr6 (35 HSPs)
chr6 (376-468)||(10339109-10339200)
chr6 (375-452)||(19040336-19040411)
chr6 (375-468)||(26562673-26562764)
chr6 (378-452)||(7265593-7265665)
chr6 (378-455)||(9027165-9027240)
chr6 (378-428)||(9658866-9658916)
chr6 (378-469)||(16766684-16766773)
chr6 (384-462)||(5000616-5000692)
chr6 (373-427)||(7801179-7801233)
chr6 (384-426)||(9629376-9629418)
chr6 (384-422)||(20371138-20371176)
chr6 (391-455)||(9025491-9025553)
chr6 (379-428)||(17341686-17341735)
chr6 (378-469)||(9107353-9107442)
chr6 (384-424)||(10842525-10842565)
chr6 (378-421)||(5732539-5732582)
chr6 (384-462)||(8931592-8931668)
chr6 (384-426)||(7377972-7378014)
chr6 (378-428)||(7996400-7996450)
chr6 (378-428)||(8022351-8022401)
chr6 (378-428)||(12696311-12696361)
chr6 (378-428)||(13851723-13851773)
chr6 (378-424)||(17841615-17841661)
chr6 (378-428)||(19044451-19044501)
chr6 (392-426)||(30866168-30866202)
chr6 (386-427)||(6665208-6665249)
chr6 (388-468)||(10294104-10294182)
chr6 (375-428)||(13360394-13360447)
chr6 (375-428)||(31959143-31959196)
chr6 (391-428)||(32511688-32511725)
chr6 (378-462)||(34073337-34073419)
chr6 (384-428)||(7977852-7977896)
chr6 (392-428)||(31579247-31579283)
chr6 (384-424)||(33001315-33001355)
chr6 (384-428)||(34595127-34595171)
[»] chr8 (22 HSPs)
chr8 (384-462)||(24362192-24362268)
chr8 (386-462)||(11927076-11927150)
chr8 (384-428)||(34897078-34897122)
chr8 (384-424)||(39954305-39954345)
chr8 (378-468)||(15816113-15816201)
chr8 (378-452)||(31109518-31109590)
chr8 (384-426)||(31236601-31236643)
chr8 (384-452)||(13844596-13844662)
chr8 (391-428)||(18067956-18067993)
chr8 (378-426)||(13436988-13437036)
chr8 (378-426)||(22651963-22652011)
chr8 (384-424)||(27101508-27101548)
chr8 (360-428)||(30271313-30271381)
chr8 (389-428)||(4611532-4611571)
chr8 (378-452)||(4786338-4786410)
chr8 (384-462)||(11944658-11944734)
chr8 (386-428)||(7658458-7658500)
chr8 (384-426)||(27213540-27213582)
chr8 (378-428)||(29510326-29510376)
chr8 (397-452)||(3025557-3025610)
chr8 (391-462)||(25566841-25566910)
chr8 (378-426)||(36934657-36934705)
[»] chr1 (45 HSPs)
chr1 (386-468)||(25361881-25361961)
chr1 (378-428)||(2896143-2896193)
chr1 (378-428)||(36878448-36878498)
chr1 (391-463)||(34371714-34371783)
chr1 (384-455)||(9828037-9828106)
chr1 (384-428)||(10474999-10475043)
chr1 (376-462)||(10572579-10572663)
chr1 (378-428)||(398787-398837)
chr1 (378-428)||(17831553-17831603)
chr1 (378-426)||(6427337-6427385)
chr1 (384-455)||(7918208-7918277)
chr1 (384-428)||(12443482-12443526)
chr1 (375-426)||(1262868-1262919)
chr1 (378-428)||(5376522-5376572)
chr1 (378-432)||(6415019-6415073)
chr1 (384-461)||(17754304-17754379)
chr1 (395-468)||(44482234-44482305)
chr1 (377-426)||(609482-609531)
chr1 (375-428)||(19562643-19562696)
chr1 (384-428)||(113292-113336)
chr1 (392-428)||(10233254-10233290)
chr1 (388-428)||(25098577-25098617)
chr1 (384-428)||(34298429-34298473)
chr1 (378-425)||(9709807-9709854)
chr1 (389-428)||(26238134-26238173)
chr1 (377-428)||(27471588-27471639)
chr1 (375-426)||(38078685-38078736)
chr1 (386-452)||(39953146-39953210)
chr1 (386-428)||(5898288-5898330)
chr1 (378-432)||(9103627-9103681)
chr1 (390-428)||(20157372-20157410)
chr1 (378-428)||(38503307-38503357)
chr1 (378-428)||(40285676-40285726)
chr1 (386-424)||(41877496-41877534)
chr1 (378-419)||(9690303-9690344)
chr1 (384-452)||(29163381-29163447)
chr1 (387-428)||(31015039-31015080)
chr1 (378-427)||(36905984-36906033)
chr1 (391-428)||(40181871-40181908)
chr1 (384-428)||(1486731-1486775)
chr1 (384-428)||(13436451-13436495)
chr1 (392-428)||(19909298-19909334)
chr1 (384-428)||(21378571-21378615)
chr1 (384-424)||(21530682-21530722)
chr1 (384-455)||(34712380-34712449)
[»] chr5 (31 HSPs)
chr5 (369-469)||(3966481-3966579)
chr5 (360-426)||(30098295-30098361)
chr5 (350-426)||(19737506-19737582)
chr5 (384-428)||(28588696-28588740)
chr5 (26-69)||(1131360-1131403)
chr5 (385-428)||(27932229-27932272)
chr5 (378-468)||(39698528-39698616)
chr5 (378-424)||(27144450-27144496)
chr5 (378-423)||(17123035-17123080)
chr5 (378-426)||(31084310-31084358)
chr5 (378-425)||(2436909-2436956)
chr5 (378-496)||(6035470-6035585)
chr5 (378-428)||(6247609-6247659)
chr5 (378-428)||(6326319-6326369)
chr5 (378-424)||(14674256-14674302)
chr5 (386-424)||(19579696-19579734)
chr5 (378-428)||(21191078-21191128)
chr5 (391-428)||(6471911-6471948)
chr5 (385-426)||(9449463-9449504)
chr5 (375-428)||(21576767-21576820)
chr5 (388-425)||(26716141-26716178)
chr5 (388-425)||(26985881-26985918)
chr5 (392-452)||(30502388-30502446)
chr5 (392-452)||(30542731-30542789)
chr5 (389-465)||(32766930-32767004)
chr5 (392-456)||(36838544-36838606)
chr5 (376-428)||(4344727-4344779)
chr5 (378-453)||(11685926-11685999)
chr5 (384-428)||(34879343-34879387)
chr5 (384-424)||(35017030-35017070)
chr5 (384-416)||(38816729-38816761)
[»] chr2 (24 HSPs)
chr2 (384-428)||(21616755-21616799)
chr2 (377-428)||(21782840-21782891)
chr2 (391-461)||(44860320-44860388)
chr2 (378-423)||(31284035-31284080)
chr2 (388-428)||(37411266-37411306)
chr2 (390-468)||(18889575-18889651)
chr2 (378-428)||(23718013-23718063)
chr2 (378-428)||(24105685-24105735)
chr2 (386-428)||(28677904-28677946)
chr2 (360-428)||(24894357-24894426)
chr2 (378-450)||(31808064-31808134)
chr2 (388-428)||(18276518-18276558)
chr2 (26-69)||(22971108-22971151)
chr2 (386-428)||(10535781-10535823)
chr2 (384-426)||(18420458-18420500)
chr2 (378-428)||(21374721-21374771)
chr2 (378-428)||(30404872-30404922)
chr2 (388-462)||(36409619-36409689)
chr2 (378-426)||(896198-896246)
chr2 (384-428)||(19573971-19574015)
chr2 (377-433)||(35447904-35447960)
chr2 (378-469)||(36756327-36756416)
chr2 (378-426)||(37558964-37559012)
chr2 (384-428)||(42832298-42832342)
[»] scaffold0004 (1 HSPs)
scaffold0004 (378-428)||(92794-92844)
[»] chr3 (37 HSPs)
chr3 (376-428)||(4987313-4987365)
chr3 (384-463)||(8039824-8039901)
chr3 (384-428)||(8383250-8383294)
chr3 (378-453)||(26290358-26290431)
chr3 (357-432)||(8412963-8413038)
chr3 (384-426)||(5407271-5407313)
chr3 (379-428)||(10690284-10690333)
chr3 (375-428)||(10954936-10954989)
chr3 (384-452)||(49505154-49505220)
chr3 (378-426)||(5441055-5441103)
chr3 (389-452)||(7928448-7928509)
chr3 (384-428)||(12704000-12704044)
chr3 (384-428)||(34307802-34307846)
chr3 (378-426)||(40052319-40052367)
chr3 (378-433)||(2620070-2620125)
chr3 (378-425)||(9800027-9800074)
chr3 (389-455)||(11313797-11313861)
chr3 (385-428)||(14979175-14979218)
chr3 (384-468)||(25064902-25064982)
chr3 (378-428)||(1438791-1438841)
chr3 (378-428)||(21479105-21479155)
chr3 (378-428)||(21720751-21720801)
chr3 (384-468)||(14209106-14209188)
chr3 (388-425)||(24633763-24633800)
chr3 (378-462)||(28678290-28678372)
chr3 (375-428)||(32429402-32429455)
chr3 (384-428)||(4990989-4991033)
chr3 (384-428)||(11493383-11493427)
chr3 (384-428)||(11610514-11610558)
chr3 (378-426)||(14829677-14829724)
chr3 (384-428)||(16192772-16192816)
chr3 (384-428)||(23870581-23870625)
chr3 (384-424)||(25074782-25074822)
chr3 (384-428)||(26508103-26508147)
chr3 (384-428)||(28917994-28918038)
chr3 (388-424)||(32804566-32804602)
chr3 (384-428)||(34910310-34910354)
[»] scaffold0036 (1 HSPs)
scaffold0036 (388-462)||(9737-9809)
[»] scaffold1528 (1 HSPs)
scaffold1528 (384-461)||(1028-1103)
[»] scaffold0306 (1 HSPs)
scaffold0306 (378-428)||(13387-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (378-428)||(21890-21940)
[»] scaffold0103 (1 HSPs)
scaffold0103 (378-428)||(51798-51848)
[»] scaffold0223 (1 HSPs)
scaffold0223 (384-460)||(20165-20239)
[»] scaffold0044 (1 HSPs)
scaffold0044 (384-428)||(53173-53217)
[»] scaffold0020 (1 HSPs)
scaffold0020 (384-455)||(135309-135378)
[»] scaffold0123 (1 HSPs)
scaffold0123 (391-461)||(44516-44584)
[»] scaffold0110 (1 HSPs)
scaffold0110 (375-426)||(28834-28885)
[»] scaffold0018 (1 HSPs)
scaffold0018 (378-425)||(192274-192321)
[»] scaffold0008 (1 HSPs)
scaffold0008 (392-462)||(263362-263430)
[»] scaffold0003 (1 HSPs)
scaffold0003 (378-468)||(241581-241669)
[»] scaffold0085 (1 HSPs)
scaffold0085 (384-426)||(26386-26428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (388-468)||(3833-3911)
[»] scaffold0024 (1 HSPs)
scaffold0024 (393-469)||(68225-68299)
[»] scaffold0697 (1 HSPs)
scaffold0697 (384-424)||(1637-1677)
[»] scaffold0361 (1 HSPs)
scaffold0361 (384-428)||(14523-14567)
[»] scaffold0066 (1 HSPs)
scaffold0066 (384-428)||(33385-33429)
[»] scaffold0049 (1 HSPs)
scaffold0049 (392-428)||(63774-63810)
[»] scaffold0027 (1 HSPs)
scaffold0027 (384-428)||(46675-46719)


Alignment Details
Target: chr4 (Bit Score: 367; Significance: 0; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 101 - 590
Target Start/End: Original strand, 1746930 - 1747419
Alignment:
Q  101 ctgtgcaaaacctaagttgacagtgaaggttgcaataagtatgacataataatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgta 200  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1746930 ctgtgcaaaacctatgttggcagtgaaggttgcaataagtatgacacaataatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgta 1747029  T
Q  201 atttataactttgtataacacataactaattgcattatattgcacattatataaaaatcttaacatacaagattactaggaaattatggtgcatagagta 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1747030 atttataactttgtataacacataactaattgcattatattgcaccttatataaaaatcttaccatacaagattactaggaaattatggtgcatagagta 1747129  T
Q  301 ataatcaaatacagaaaatctaagttggcattttcaaagnnnnnnnctagtttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgcta 400  Q
    |||||||||||        ||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1747130 ataatcaaata--------ctaagttggcattttcaaagaaaaaaactagtttcaatcaatgaagcaaggacaccgagcacttacacgccgacaccgcta 1747221  T
Q  401 ataaattgagaaaatcacataattcagtttaa--------cattttatgtgtcagtgtcgtgttggtgtcgaacacatggggacacgcttaatctaagga 492  Q
    ||||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1747222 ataaattgagaaaatcacataattcagtttaattatacgttattatatgtgtcagtgtcgtgttggtgtcgaacacatggggacacgcctaatctaagga 1747321  T
Q  493 gtgttgcaggtcaacctcttcaaggaagggaagtcatcgtagtcgtagctaacaactaggtcgtttttatggagagagtggtcaaagttggaacaagt 590  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1747322 gtgttgtaggtcaacctcttcaagggagggaagtcattgtagtcgtggctaacaactaggtcgtttttatggagagagtggtcaaagttggaacaagt 1747419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 35723457 - 35723373
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaat-cacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 463  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||  ||| |||||||||||||||| | |||||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgta--attatatgtgtcagtgtcgtatcggtgtcg 35723373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 339
Target Start/End: Original strand, 6005809 - 6006005
Alignment:
Q  142 tgacataataatcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatatt 241  Q
    ||||| || |||||| ||||||||||| ||||||||||||||  ||| ||||| || ||||||| |||  ||||||||||  ||||  ||  |||| |||    
T  6005809 tgacacaagaatcaagtccagatgatataattcaagggaaagtgaag-aaaactatataatttaaaacgatgtataacacccaacttgttatattacatt 6005907  T
Q  242 gcacattatataaaaatcttaacatacaagattactaggaaattatggtgcatagagtaataatcaaatacagaaaatctaagttggcattttcaaag 339  Q
    |  ||||||||||| || ||| ||||||  |||| | || ||||||| |||| || || | || || |||||  |||||||||||| |||||||||||    
T  6005908 gtgcattatataaatatgttaccatacacaattaattggcaattatgatgcacagggtgacaaacatatacaacaaatctaagttgacattttcaaag 6006005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 40613443 - 40613487
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  40613443 acacgccgacaccgctaatattttgagaaaatcacataattcagt 40613487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 428
Target Start/End: Complemental strand, 8423779 - 8423740
Alignment:
Q  389 ccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagt 8423740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 20743358 - 20743300
Alignment:
Q  370 gacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| |||||||| |||||||||||| | |||||| |||||||||| ||||||||||||    
T  20743358 gacatcgaacactgacacgccgacacggataataatttgagaaaatgacataattcagt 20743300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 36635311 - 36635361
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  36635311 acactgacacgccaacaccactaataatttgagaaaatcacataattcagt 36635361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 409 - 469
Target Start/End: Complemental strand, 44132685 - 44132627
Alignment:
Q  409 agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 469  Q
    |||||||||| ||||||||| |||  || |||||||| |||||||||||||||||||||||    
T  44132685 agaaaatcacgtaattcagtataa--ttatatgtgtcggtgtcgtgttggtgtcgaacaca 44132627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 7012059 - 7012103
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||    
T  7012059 acacgccgacaccgataataatttgagaaaatgacataattcagt 7012103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 462
Target Start/End: Complemental strand, 22234957 - 22234880
Alignment:
Q  384 acacgccgacaccgctaataaattg-agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||||||||||||||||| || ||| | |||||||||||||||||| ||  ||| |||||||| ||||||||| ||||||    
T  22234957 acacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgta--attctatgtgtcggtgtcgtgtcggtgtc 22234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 23293052 - 23293008
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  23293052 acacgccgacacagctaataatttgaaaaaatcacataattcagt 23293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 461
Target Start/End: Complemental strand, 38148785 - 38148716
Alignment:
Q  390 cgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 461  Q
    ||||||||||||||  ||||||||||||||||||||||| ||  ||||||  ||||  ||||||||||||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgta--attttaaatgtcgatgtcgtgttggtgt 38148716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 903909 - 903959
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||| ||| ||||| |||||| |||||||||||||||||||||||    
T  903909 acactgacacaccggcaccgttaataatttgagaaaatcacataattcagt 903959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 428
Target Start/End: Complemental strand, 22440660 - 22440622
Alignment:
Q  390 cgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagt 22440622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Complemental strand, 23861492 - 23861455
Alignment:
Q  389 ccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  23861492 ccgacaccgctaataaattgataaaatcacatgattca 23861455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 433
Target Start/End: Complemental strand, 30522973 - 30522932
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagtttaac 433  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaac 30522932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 16189710 - 16189746
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||| || |||||||||||||||||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagt 16189746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 17345487 - 17345451
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaa 414  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  17345487 acactgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 20521921 - 20521873
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| ||||||||| |||| |||||| |||| ||||||||||||||||    
T  20521921 acactgacacgccgataccgataataatttgataaaatcacataattca 20521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 24343500 - 24343544
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||    
T  24343500 acacgccgacacggataataatttgagaaaattacataattcagt 24343544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 34200327 - 34200295
Alignment:
Q  394 accgctaataaattgagaaaatcacataattca 426  Q
    ||||||||||| |||||||||||||||||||||    
T  34200327 accgctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 4e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 378 - 461
Target Start/End: Original strand, 32308107 - 32308188
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 461  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attgtatgtgtcagtgtcgtgtcggtgt 32308188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 19206043 - 19206119
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||  ||| |||||||| ||||| ||||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattca--ttataattatatgtgtcggtgtcttgttggtgtc 19206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 6630984 - 6630895
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 469  Q
    ||||| ||||||||||||| ||||||| |||||||| |||| ||||||||| ||  ||| ||||||||  |||||||||||||||| |||||    
T  6630984 acactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgta--attatatgtgtcgatgtcgtgttggtgtcggacaca 6630895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 29787435 - 29787391
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagt 29787391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 462
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  385 cacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||    || |||||| ||||||||||||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaa----ttgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 11722170 - 11722121
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 427  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  11722170 acactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 455
Target Start/End: Original strand, 5548673 - 5548738
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    |||||||||||| |||| |||||||||||| |||||||||| ||  ||| ||||||||||||||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgta--attatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 452
Target Start/End: Original strand, 20549778 - 20549850
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    ||||| |||| |||||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgta--attatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 22868029 - 22868097
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagt 448  Q
    ||||| ||||||||||||| |||||||  |||||||||||||||||||||| ||  ||| |||||||||||    
T  22868029 acactgacacgccgacaccactaataatatgagaaaatcacataattcagtgta--attatatgtgtcagt 22868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 23191891 - 23191933
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  23191891 acgccgacaccgctaataatttgagaaaatcacatatttcagt 23191933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 26733291 - 26733341
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||    
T  26733291 acactgacacgtcgacaccgctaataatttgacaaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 27945028 - 27945078
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  27945028 acactgacacgccgacaccactaataatttgagaaaattacataattcagt 27945078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 455
Target Start/End: Complemental strand, 22602781 - 22602707
Alignment:
Q  379 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    |||| ||||||||||||||  ||| | ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 24339635 - 24339717
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||| ||||||| ||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacac 24339717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 425
Target Start/End: Original strand, 28155563 - 28155604
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattc 425  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattc 28155604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 24289813 - 24289857
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  24289813 acacgccgacaccgccaataatttgagaaaattacataattcagt 24289857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 25481895 - 25481939
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagt 25481939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 10042924 - 10042970
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||||||||    
T  10042924 acacttacacgccgacaccactaataatttgataaattcacataatt 10042970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 455
Target Start/End: Complemental strand, 21828477 - 21828402
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    ||||| |||||||||||||| || ||| |||||||||||||||||| || | ||  ||| ||||||||||||| ||||    
T  21828477 acactgacacgccgacaccgttagtaatttgagaaaatcacataatccattgta--attgtatgtgtcagtgttgtgt 21828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 22484012 - 22484062
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| || |||||||  |||||||||||    
T  22484012 acactgacacgccgacaccgctaataattttagaaaattgcataattcagt 22484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 428
Target Start/End: Complemental strand, 32287523 - 32287485
Alignment:
Q  390 cgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagt 32287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 25791640 - 25791685
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataat 423  Q
    ||||| ||||||||||||||||||| | |||||||| |||||||||    
T  25791640 acactgacacgccgacaccgctaattatttgagaaattcacataat 25791685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 462
Target Start/End: Complemental strand, 26329454 - 26329372
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||| ||||||||||| || |||||| ||||||||| |||| |||||||| ||  ||| |||||||| | ||||||| ||||||    
T  26329454 acactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgta--attatatgtgtcggcgtcgtgtcggtgtc 26329372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 467
Target Start/End: Complemental strand, 35297723 - 35297657
Alignment:
Q  399 taataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 467  Q
    |||||| |||||||||||||||||||||  |||  ||| |||||||  ||||||||||| |||||||||    
T  35297723 taataatttgagaaaatcacataattca--ttataattatatgtgttggtgtcgtgttgatgtcgaaca 35297657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 426
Target Start/End: Original strand, 35861950 - 35861999
Alignment:
Q  377 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||| ||||||||||||  ||||||| |||| ||||||||||||||||    
T  35861950 aacactaacacgccgacacaactaataatttgaaaaaatcacataattca 35861999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 420
Target Start/End: Original strand, 1433447 - 1433483
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacat 420  Q
    |||||||||||||| |||||| |||||||||||||||    
T  1433447 acacgccgacaccgttaataatttgagaaaatcacat 1433483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 428
Target Start/End: Original strand, 2424619 - 2424651
Alignment:
Q  396 cgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||| |||||||||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagt 2424651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 2425799 - 2425759
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    |||||||| ||||| |||||| |||||||||||||||||||    
T  2425799 acacgccggcaccgttaataatttgagaaaatcacataatt 2425759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 5307253 - 5307293
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||||||||||| || |||| |||||||||||||||||||    
T  5307253 acacgccgacaccacttataatttgagaaaatcacataatt 5307293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 467
Target Start/End: Complemental strand, 23128727 - 23128646
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 467  Q
    |||||| ||||||  |||||| ||||||||| || |||||||||| |||  |  |||||||| |||| ||||||||||||||||    
T  23128727 acacgctgacaccaataataatttgagaaaaccatataattcagtgtaa--tcatatgtgtcggtgttgtgttggtgtcgaaca 23128646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 376 - 468
Target Start/End: Complemental strand, 10339200 - 10339109
Alignment:
Q  376 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||||| ||||||||||||||| | ||| ||||||||||||||||||||||| | | ||| |||||||||||| ||||| ||||||| ||||    
T  10339200 gaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgtta-attatatgtgtcagtgccgtgtcggtgtcggacac 10339109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 452
Target Start/End: Original strand, 19040336 - 19040411
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  19040336 cgaatactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 26562673 - 26562764
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    |||||||  |||||||||||| ||||| || ||||||||||||||||||||||| ||  ||| ||||||||  |||||||| ||||||||||||    
T  26562673 cgaacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcgatgtcgtgtcggtgtcgaacac 26562764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 452
Target Start/End: Complemental strand, 7265665 - 7265593
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  7265665 acactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 455
Target Start/End: Original strand, 9027165 - 9027240
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||  ||| |||||||| |||||||||    
T  9027165 acactgacacgccgacaccgctaataatttgagataatcacataattccgtgta--attatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 9658866 - 9658916
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  9658866 acactgacacgccgacaccgctaataatttaagaaaatcacataattcagt 9658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 469
Target Start/End: Original strand, 16766684 - 16766773
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 469  Q
    ||||| |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||| ||||||| |||||    
T  16766684 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacaca 16766773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 384 - 462
Target Start/End: Complemental strand, 5000692 - 5000616
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||| ||  ||||||| |||||||||| ||| ||||||    
T  5000692 acacgtcgacaccgctaataattcgagaaaatcacatgattcagtata--attttatatgtcagtgtcatgtcggtgtc 5000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 7801233 - 7801179
Alignment:
Q  373 accgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcag 427  Q
    |||||||||| ||||||||||||  ||||||| |||| |||||||||||||||||    
T  7801233 accgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcag 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 9629376 - 9629418
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  9629376 acacgccgacaccgccaataatttgagaaaatcacataattca 9629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 20371176 - 20371138
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataa 422  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  20371176 acacgccgacaccgctaataatttgagaaaatcacataa 20371138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 455
Target Start/End: Complemental strand, 9025553 - 9025491
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    ||||| |||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 17341735 - 17341686
Alignment:
Q  379 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| |||||||||||||| |||||| |||| ||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagt 17341686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 9107442 - 9107353
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 469  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| |||||||| ||  |||  | ||||| ||||||||| ||||||| |||||    
T  9107442 acactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacaca 9107353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 10842525 - 10842565
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  10842525 acacgccgacaccgctaataatttgaaaaaatcacataatt 10842565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 5732582 - 5732539
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacata 421  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  5732582 acactgacacgccgacaccgttaataatttgagaaaatcacata 5732539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 462
Target Start/End: Complemental strand, 8931668 - 8931592
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||||||||||| ||||| || |||||||||| |||||||||||| ||  ||| ||||||||  |||||||| ||||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtata--attatatgtgtcgatgtcgtgtcggtgtc 8931592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 7377972 - 7378014
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  7377972 acaccccgacaccgctaaaaatttgagaaaatcacataattca 7378014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 7996450 - 7996400
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  7996450 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 7996400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 8022351 - 8022401
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  8022351 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 8022401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 12696311 - 12696361
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  12696311 acactgacacgccgacacagctaataatttgaaaaaattacataattcagt 12696361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 13851723 - 13851773
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||| ||||||||||||||| |||||||||| || |||||||||    
T  13851723 acactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagt 13851773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 17841661 - 17841615
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  17841661 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 17841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 19044451 - 19044501
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||  ||||||| ||||||| |||||||||||||||    
T  19044451 acactgacacgccgacacgactaataatttgagaatatcacataattcagt 19044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 426
Target Start/End: Complemental strand, 30866202 - 30866168
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattca 426  Q
    ||||||||||||| |||||||||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattca 30866168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 427
Target Start/End: Original strand, 6665208 - 6665249
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcag 427  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  6665208 acgccgaaaccgctaataatttgagtaaatcacataattcag 6665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 10294104 - 10294182
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||| ||||||||||| |||||| |||| |||| |||| | |||  || |||||||| ||||||||||||||||| ||||    
T  10294104 gccgataccgctaataatttgagataatcgcatatttcaatgtaa--ttatatgtgtcggtgtcgtgttggtgtcggacac 10294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 428
Target Start/End: Complemental strand, 13360447 - 13360394
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||  ||||| ||||||| ||| ||| |||||||||||||||||||||||    
T  13360447 cgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagt 13360394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 428
Target Start/End: Original strand, 31959143 - 31959196
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||| |||||||| ||| |||||||| |||| ||||||||||||| ||||    
T  31959143 cgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagt 31959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 32511725 - 32511688
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||| || ||||||||||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagt 32511688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 462
Target Start/End: Complemental strand, 34073419 - 34073337
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||| ||| ||| ||| ||||||||| ||||||||||| ||||||||||| ||  ||| |||| ||| ||||||||| ||||||    
T  34073419 acactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgta--attatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 7977896 - 7977852
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagt 7977852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 428
Target Start/End: Complemental strand, 31579283 - 31579247
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||| |||||| |||||||||||||||||||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagt 31579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 33001355 - 33001315
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataatt 33001315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 34595127 - 34595171
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34595127 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34595171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 462
Target Start/End: Complemental strand, 24362268 - 24362192
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||  ||| ||||||||| |||||||| ||||||    
T  24362268 acacgccgacaccgctaataatttgagagaatcacataattcagtgta--attatatgtgtcaatgtcgtgtcggtgtc 24362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 11927150 - 11927076
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||||||||| | |||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||||||||||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 34897078 - 34897122
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  34897078 acacgtcgacaccgctaataatttgagaaaatcacataattcagt 34897122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 424
Target Start/End: Complemental strand, 39954345 - 39954305
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  39954345 acacgccgacaccgctaataatttgagaaaatcacataatt 39954305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 468
Target Start/End: Complemental strand, 15816201 - 15816113
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||| ||||||||||||  ||||||| |||| |||||||||||||| ||| ||  ||| || ||||| ||||||||||||||||| ||||    
T  15816201 acactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgta--attataagtgtcggtgtcgtgttggtgtcggacac 15816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 452
Target Start/End: Complemental strand, 31109590 - 31109518
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    ||||| |||||||||||||| |||||| |||||||||||| | |||||||| ||||  | |||||||||||||||    
T  31109590 acactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaac--tatatgtgtcagtgtcg 31109518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 31236643 - 31236601
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattca 31236601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 13844662 - 13844596
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  13844662 acacgccgacactgctaataatttgagaaaatcacataattgagtgta--attatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 18067993 - 18067956
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagt 18067956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 13437036 - 13436988
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  13437036 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 22651963 - 22652011
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  22651963 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 27101508 - 27101548
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  27101508 acacgccgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 30271381 - 30271313
Alignment:
Q  360 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||  ||||||| ||||| |||||||||||| |||||| | |||| ||||||||||||| ||||    
T  30271381 atgaagcacagacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagt 30271313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 428
Target Start/End: Original strand, 4611532 - 4611571
Alignment:
Q  389 ccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagt 4611571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 452
Target Start/End: Complemental strand, 4786410 - 4786338
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    ||||| |||||||||||||  |||||| || |||||||||||||||||||| ||  ||| |||||||| ||||||    
T  4786410 acactgacacgccgacaccattaataatttaagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 11944658 - 11944734
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||||||||||| | |||||| |||| |||||||||||| ||||| ||  ||| |||||||| ||||||||||| ||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgta--attatatgtgtcggtgtcgtgttgatgtc 11944734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 7658458 - 7658500
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagt 7658500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 27213540 - 27213582
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||||||| |||||||| || ||||||||||||||||||    
T  27213540 acacgccgacactgctaataatttcagaaaatcacataattca 27213582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 29510376 - 29510326
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  29510376 acactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagt 29510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  397 gctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    |||||||| ||||||||||||||||||||||| ||  ||| || ||||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgta--attataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 25566841 - 25566910
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 36934657 - 36934705
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| ||||| ||||||||||||||| | || ||||||||||||||||    
T  36934657 acactaacacgtcgacaccgctaataattcgaaaaaatcacataattca 36934705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 468
Target Start/End: Original strand, 25361881 - 25361961
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||||||||| || |||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| ||||||| ||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 2896193 - 2896143
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2896193 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 2896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 36878448 - 36878498
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  36878448 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 36878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 34371714 - 34371783
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 463  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||||||||||    
T  34371714 gacaccgctaataa-ttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtcg 34371783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 9828037 - 9828106
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||| ||  |||||||||||| |||||||||    
T  9828037 acacgccgacaccactaataatttgataaaatcacataattcagtgta--attttatgtgtcggtgtcgtgt 9828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 10475043 - 10474999
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  10475043 acacgccgacaccgctaataacttgagaaaatcacataattcagt 10474999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 10572663 - 10572579
Alignment:
Q  376 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||| || ||  |||  ||||||| |||| |||||||||||    
T  10572663 gaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgta--attaaatgtgtcggtgttgtgttggtgtc 10572579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 398837 - 398787
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  398837 acactgacacgccgacaccgctaataatttgaaaaaatcacataattcagt 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 17831603 - 17831553
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  17831603 acactgacacgccgacaccgctaataatttgagaaaatcacattattcagt 17831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 6427337 - 6427385
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  6427337 acactgacacgccaacaccgctaataatttgagaaaatcacataattca 6427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 7918277 - 7918208
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    |||||| |||| | ||||||| ||||||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  7918277 acacgctgacatcactaataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 12443526 - 12443482
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  12443526 acacgccgacacagctaataatttgagaaaatcacataattcagt 12443482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 426
Target Start/End: Original strand, 1262868 - 1262919
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||  |||||||||||| |||||||| |||||||||||||||||||||    
T  1262868 cgaacacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 5376572 - 5376522
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| || ||||||| ||||||||||||    
T  5376572 acactaacacgccgacaccgctaataatttaagaaaataacataattcagt 5376522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 432
Target Start/End: Complemental strand, 6415073 - 6415019
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 432  Q
    ||||| ||||||||||| ||||||| | |||||||||||||||||| ||||||||    
T  6415073 acactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaa 6415019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 461
Target Start/End: Original strand, 17754304 - 17754379
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 461  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  17754304 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 17754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 44482234 - 44482305
Alignment:
Q  395 ccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||| |||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||||| ||||||| ||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcggacac 44482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 609531 - 609482
Alignment:
Q  377 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||| ||||||||||||| ||||||| |||||||||| ||||||||||    
T  609531 aacactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 428
Target Start/End: Complemental strand, 19562696 - 19562643
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||| |||||||||||| |||||||| ||||||||||| |||| ||||||    
T  19562696 cgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagt 19562643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 113292 - 113336
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagt 113336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 10233254 - 10233290
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10233254 acaccactaataaattgagaaaatcacataattcagt 10233290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 25098617 - 25098577
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  25098617 gccgacaccgctgataatttgagaaaatcacataattcagt 25098577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 34298429 - 34298473
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||    
T  34298429 acacaccgacaccactaataatttgagaaaatcacataattcagt 34298473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 9709807 - 9709854
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 425  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||||||||||    
T  9709807 acactgacatgcctacaccgctaataatttgagaaaatcacataattc 9709854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 428
Target Start/End: Complemental strand, 26238173 - 26238134
Alignment:
Q  389 ccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  26238173 ccgacaccgctaataatttgagaaaataacataattcagt 26238134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 428
Target Start/End: Complemental strand, 27471639 - 27471588
Alignment:
Q  377 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||| |||| |||| ||||||||||| ||||||||| |||||||||||||    
T  27471639 aacactgacacaccgataccgctaataatttgagaaaagcacataattcagt 27471588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 426
Target Start/End: Complemental strand, 38078736 - 38078685
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||| ||||| |||||| |||||||| |||| ||||||||||||||||    
T  38078736 cgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattca 38078685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 452
Target Start/End: Complemental strand, 39953210 - 39953146
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    ||||||||||||||||||| || |||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  39953210 acgccgacaccgctaataattttagaaaatcacataatttagtgta--attgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 5898330 - 5898288
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  5898330 acgccgacaccgctaataatctgaaaaaatcacataattcagt 5898288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 432
Target Start/End: Original strand, 9103627 - 9103681
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 432  Q
    ||||| |||||||||||| | |||||| |||| |||||||||||||| |||||||    
T  9103627 acactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa 9103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 428
Target Start/End: Complemental strand, 20157410 - 20157372
Alignment:
Q  390 cgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagt 20157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 38503307 - 38503357
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||| |||||||||||||||| |||||||||||| ||| ||||||    
T  38503307 acactaacacaccgacaccgctaataatttgagaaaatcatatatttcagt 38503357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 40285726 - 40285676
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||| || ||||||||||||| ||||||||||| |||||||||||    
T  40285726 acactgacacaccaacaccgctaataatttgagaaaatcgcataattcagt 40285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 41877534 - 41877496
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatt 41877496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 9690344 - 9690303
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcaca 419  Q
    ||||| |||||| ||||||||||||||| |||||||||||||    
T  9690344 acactgacacgctgacaccgctaataaactgagaaaatcaca 9690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 29163447 - 29163381
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    |||||||||||||||||| || ||  ||||||||||||||||| ||||  ||| |||||||| ||||||    
T  29163447 acacgccgacaccgctaaaaatttaggaaaatcacataattcaattta--attatatgtgtcggtgtcg 29163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 31015039 - 31015080
Alignment:
Q  387 cgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| |||| |||||||| |||||||||||||||||||||||    
T  31015039 cgcctacacagctaataatttgagaaaatcacataattcagt 31015080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 36905984 - 36906033
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 427  Q
    ||||| |||| || |||||||||||||  |||||||||||||||||||||    
T  36905984 acactgacacaccaacaccgctaataatctgagaaaatcacataattcag 36906033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 40181871 - 40181908
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagt 40181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 1486775 - 1486731
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  1486775 acacgctgacacagctaataatttgaaaaaatcacataattcagt 1486731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 13436451 - 13436495
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||||| || || |||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagt 13436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 19909298 - 19909334
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  19909298 acaccgctaataatttgagaaaatcacataactcagt 19909334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 21378571 - 21378615
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| ||||||| ||||||||||||| ||||| ||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagt 21378615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 21530682 - 21530722
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  21530682 acacgccgacaccgttaataatttgagaaaatcatataatt 21530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 34712449 - 34712380
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    |||| ||| ||| |||||||| |||||||||| |||||||| ||| |||  || ||||||||||||||||||    
T  34712449 acacaccgtcactgctaataatttgagaaaataacataatttagtgtaa--ttatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 469
Target Start/End: Original strand, 3966481 - 3966579
Alignment:
Q  369 ggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    |||||| | ||||| ||| ||||||||||||||||| |||||||||||||| |||||||| ||  ||| |||||||| |||||||||  |||||| ||||    
T  3966481 ggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgta--attatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 30098295 - 30098361
Alignment:
Q  360 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||| |||||||| ||||| ||||| ||| |||| |||||| |||||||||||||||||||||    
T  30098295 atgaagcacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattca 30098361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 426
Target Start/End: Complemental strand, 19737582 - 19737506
Alignment:
Q  350 gtttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||||  ||||||||||||| || ||||| |||||| || |||| |||||| |||||||||| ||||||||||    
T  19737582 gtttcaatctctgaagcaaggacaacggacactgacacgctgaaaccgataataatttgagaaaattacataattca 19737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 28588740 - 28588696
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  28588740 acacgccgacaccggtaataatttgagaaaatcacataattcagt 28588696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 1131403 - 1131360
Alignment:
Q  26 cctccaccagctacttcttctctcaatgttctttgcacaggttc 69  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  1131403 cctccaccaactacttcttctctcaatgttctttgcgcaggttc 1131360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 428
Target Start/End: Original strand, 27932229 - 27932272
Alignment:
Q  385 cacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagt 27932272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 468
Target Start/End: Original strand, 39698528 - 39698616
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||| |||||| ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| ||||||| ||||    
T  39698528 acactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcggacac 39698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 27144450 - 27144496
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  27144450 acactgacacgccgacaccgctaataatttgaggaaatcacataatt 27144496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 17123035 - 17123080
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataat 423  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  17123035 acactgacacgccaacaccgctaataatttgagaaaatcacataat 17123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 31084310 - 31084358
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  31084310 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 31084358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 2436909 - 2436956
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 425  Q
    ||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  2436909 acactgacacgccgacaccgctaataatttgcaaaaatcacataattc 2436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 496
Target Start/End: Original strand, 6035470 - 6035585
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacacatggggaca 477  Q
    ||||| ||||||||||||||||||||| ||||| |||| | |||||||||| ||  ||| ||| |||| ||||||||| |||| |  ||||   ||||||    
T  6035470 acactgacacgccgacaccgctaataatttgag-aaataatataattcagtgta--attatatttgtcggtgtcgtgtcggtgacagacacgccgggaca 6035566  T
Q  478 cgcttaatctaaggagtgt 496  Q
    ||| |||||| ||||||||    
T  6035567 cgcctaatctgaggagtgt 6035585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 6247609 - 6247659
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagt 6247659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 6326369 - 6326319
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||| ||||| ||| |||||||||| ||||||||||||    
T  6326369 acactgacacgccgacatcgctagtaatttgagaaaattacataattcagt 6326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 14674256 - 14674302
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  14674256 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 14674302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 19579696 - 19579734
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatt 19579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 21191128 - 21191078
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||| |||||||| |||||||| |||| ||||||||||||||||||    
T  21191128 acactgacatgccgacacagctaataatttgaaaaaatcacataattcagt 21191078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 6471948 - 6471911
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagt 6471911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 9449463 - 9449504
Alignment:
Q  385 cacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  9449463 cacgccgacaccaataataatttgagaaaatcacataattca 9449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 428
Target Start/End: Complemental strand, 21576820 - 21576767
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||| | ||||| |||| |||||||| |||| ||||||||||||||||||    
T  21576820 cgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagt 21576767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 26716141 - 26716178
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattc 425  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26716141 gccgacactgctaataatttgagaaaatcacataattc 26716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 26985881 - 26985918
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattc 425  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26985881 gccgacactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 30502446 - 30502388
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 30542789 - 30542731
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 32767004 - 32766930
Alignment:
Q  389 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaa 465  Q
    |||||||||||||||| ||||||||||| || |||||| | ||  ||| |||||||  ||||||||| |||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgta--attatatgtgtttgtgtcgtgtcggtgtcgaa 32766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 456
Target Start/End: Original strand, 36838544 - 36838606
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgtt 456  Q
    ||||||||||||| |||||||||| |||||||| ||| ||  ||| |||||||| ||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgta--attatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 428
Target Start/End: Original strand, 4344727 - 4344779
Alignment:
Q  376 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||| |||||| ||||||| |||||| |||| ||||| ||||||||||||    
T  4344727 gaacactaacacgctgacaccgataataatttgaaaaaatgacataattcagt 4344779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 453
Target Start/End: Original strand, 11685926 - 11685999
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 453  Q
    ||||| ||| ||||||||||||||||| |||||||| || ||||||| ||| ||  ||| |||||||| |||||||    
T  11685926 acactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgta--attatatgtgtcggtgtcgt 11685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 34879343 - 34879387
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||| ||||||||| || |||||||||||| ||||||||||    
T  34879343 acacgccggcaccgctaaaaatttgagaaaatcatataattcagt 34879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 35017030 - 35017070
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  35017030 acacgccgaaaccactaataatttgagaaaatcacataatt 35017070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 416
Target Start/End: Complemental strand, 38816761 - 38816729
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatc 416  Q
    ||||||||||||||||||||| |||||||||||    
T  38816761 acacgccgacaccgctaataatttgagaaaatc 38816729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 21616755 - 21616799
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21616755 acacgccgacaccgctaataatttgagaaaatcacataattcagt 21616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 428
Target Start/End: Complemental strand, 21782891 - 21782840
Alignment:
Q  377 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  21782891 aacactgacacgccgacactgctaataatttgagaaaatcacataattcagt 21782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 461
Target Start/End: Original strand, 44860320 - 44860388
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 461  Q
    |||||||||||||| ||||||||||| ||||||||||| ||  ||| |||||||| |||||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgta--attatatgtgtcggtgtcgtgttggtgt 44860388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 31284035 - 31284080
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataat 423  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31284035 acacttacacgccgacactgctaataatttgagaaaatcacataat 31284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 37411306 - 37411266
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  37411306 gccgacaccgctaataatttgagaaaatcacataattcagt 37411266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 18889651 - 18889575
Alignment:
Q  390 cgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    |||| |||||||||||||||||||||||||||||||||| ||  ||  |||||||| ||||| |||| |||||| ||||    
T  18889651 cgacgccgctaataaattgagaaaatcacataattcagtgta--atcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 23718013 - 23718063
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  23718013 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 23718063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 24105685 - 24105735
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  24105685 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 24105735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 28677904 - 28677946
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagt 28677946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 24894357 - 24894426
Alignment:
Q  360 atgaagcaaggacac-cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||| |||||| || ||||| |||||||||||| |||||||| || | ||||||||||||||||||    
T  24894357 atgaagcacggacacacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagt 24894426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 450
Target Start/End: Original strand, 31808064 - 31808134
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgt 450  Q
    ||||| |||| |||||||||||||||| || | |||||||||||||||||| ||  ||| |||||||||||||    
T  31808064 acactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgta--attatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 18276518 - 18276558
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcacttaattcagt 18276558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 22971108 - 22971151
Alignment:
Q  26 cctccaccagctacttcttctctcaatgttctttgcacaggttc 69  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||    
T  22971108 cctccaccaactacttcttctttcaatgttctttgcgcaggttc 22971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 10535823 - 10535781
Alignment:
Q  386 acgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  10535823 acgccgacaccgataataatttgagaaaatgacataattcagt 10535781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 18420500 - 18420458
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  18420500 acacgccaacactgctaataatttgagaaaatcacataattca 18420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 21374771 - 21374721
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  21374771 acactaacacgccgacacagctaataatttgaaaaaattacataattcagt 21374721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 30404922 - 30404872
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||| | |||||| |||| ||||||||||||||||||    
T  30404922 acactgacacgccgacacggttaataatttgaaaaaatcacataattcagt 30404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 36409689 - 36409619
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||||||||||| |||| |||| |||||||||||||| ||| |||    ||||||||| ||||| ||||||||||    
T  36409689 gccgacaccgctgataatttgaaaaaatcacataatttagtgtaa----ttatgtgtcggtgtcatgttggtgtc 36409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 896198 - 896246
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||||||| |||||||  |||||||||||||||| ||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaatcacatatttca 896246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 19573971 - 19574015
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||    
T  19573971 acacgccgacaccgataataatttaagaaaataacataattcagt 19574015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 35447960 - 35447904
Alignment:
Q  377 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 433  Q
    ||||||||||||| |||| ||||||||| |  ||||||| |||||||||||| ||||    
T  35447960 aacacttacacgctgacatcgctaataattaaagaaaattacataattcagtataac 35447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 36756416 - 36756327
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 469  Q
    ||||| ||||| ||||||  ||||||| ||||  |||| |||||||||||| |||  || || ||||| |||||||||| ||||||||||||    
T  36756416 acactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaa--ttataagtgtcggtgtcgtgttagtgtcgaacaca 36756327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 37558964 - 37559012
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||||||| |||||||| |||  ||||||||||||||||    
T  37558964 acactgacacgccgacacagctaataatttgtaaaaatcacataattca 37559012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 42832342 - 42832298
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  42832342 acacaccgacaccgctaataatttgagaaaattacatatttcagt 42832298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 92794 - 92844
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  92794 acactgacacgccgacaccgctaataatttgagaaaattacataattcagt 92844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 4987365 - 4987313
Alignment:
Q  376 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  4987365 gaacactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 4987313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 463
Target Start/End: Complemental strand, 8039901 - 8039824
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 463  Q
    ||||||| ||||||||||||| |||||||||| | |||||||||| ||  ||| |||||||| ||||||||| |||||||    
T  8039901 acacgccaacaccgctaataatttgagaaaattatataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcg 8039824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 8383250 - 8383294
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  8383250 acacgccgacaccgctaataatttgagaaaatcatataattcagt 8383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 453
Target Start/End: Original strand, 26290358 - 26290431
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 453  Q
    ||||| |||||||||||||  |||||| |||||||||||||||| ||| |||||  ||| ||||||||||||||||    
T  26290358 acactgacacgccgacaccattaataatttgagaaaatcacatagttcggttta--attatatgtgtcagtgtcgt 26290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 8413038 - 8412963
Alignment:
Q  357 tcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 432  Q
    ||||||||||| |||||||| ||| | |||  |||||||  ||||||| ||||||||| |||||||||||||||||    
T  8413038 tcaatgaagcacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataattcagtttaa 8412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 5407313 - 5407271
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  5407313 acacgccgacaccgctaaaaatttgagaaaatcacataattca 5407271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 10690333 - 10690284
Alignment:
Q  379 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||| | ||||||||||||||  ||||||||||||||||||||||    
T  10690333 cacttacactcggacaccgctaataatctgagaaaatcacataattcagt 10690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 428
Target Start/End: Original strand, 10954936 - 10954989
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  10954936 cgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagt 10954989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 49505220 - 49505154
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    |||||| || ||||||||||| ||||||||||||||||||| ||| ||  ||| |||||||||||||||    
T  49505220 acacgcagagaccgctaataatttgagaaaatcacataatttagtgta--attatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 5441103 - 5441055
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||||||    
T  5441103 acactgacacgccgtcaccgctaaaaatttgagaaaatcacataattca 5441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 7928448 - 7928509
Alignment:
Q  389 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 452  Q
    |||||||||||||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 12704000 - 12704044
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||    
T  12704000 acacgccgacaccactaataatttgagaaaagcacataattcagt 12704044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 34307846 - 34307802
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagt 34307802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 40052319 - 40052367
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  40052319 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 2620125 - 2620070
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 433  Q
    ||||| ||||||||||||| ||||| | ||||||||||||||||||| ||| ||||    
T  2620125 acactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaac 2620070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 9800027 - 9800074
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 425  Q
    ||||| ||||||||||||| ||||||| |||||||||| |||||||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattc 9800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 455
Target Start/End: Complemental strand, 11313861 - 11313797
Alignment:
Q  389 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||  ||| ||||||| ||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgta--attatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Original strand, 14979175 - 14979218
Alignment:
Q  385 cacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagt 14979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 25064902 - 25064982
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||||||||||||||||| | |||| |||||||||||||| ||| |||    ||||||||  || |||||||||||||| ||||    
T  25064902 acacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaa----ttatgtgttggtatcgtgttggtgtcggacac 25064982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 1438791 - 1438841
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||| |||||| |||||| || |||||||||||||||||||||||    
T  1438791 acactgacacaccgacatcgctaacaatttgagaaaatcacataattcagt 1438841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 21479105 - 21479155
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  21479105 acactgacacgccgacacagctaataatttgaaaaaatcacacaattcagt 21479155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 21720751 - 21720801
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||||| |||||| ||||||| ||| |||||||||||    
T  21720751 acactgacacgccgacaccgataataatttgagaatatctcataattcagt 21720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 468
Target Start/End: Original strand, 14209106 - 14209188
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||||||||||  ||||||| || | |||||||||||||||||| ||  |||  | ||||||||||||||| ||||||| ||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcggacac 14209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 24633763 - 24633800
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattc 425  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  24633763 gccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 462
Target Start/End: Original strand, 28678290 - 28678372
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    ||||| ||| |||||| | |||||||| || | |||||||||||||| ||| |||  || |||||||| ||||||||||||||||    
T  28678290 acactgacatgccgacgctgctaataatttaataaaatcacataatttagtataa--ttgtatgtgtcggtgtcgtgttggtgtc 28678372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 428
Target Start/End: Complemental strand, 32429455 - 32429402
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||| | |||| |||||| ||||||||| || ||||||||||||||||||||    
T  32429455 cgaacattgacactccgacaacgctaataatttaagaaaatcacataattcagt 32429402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 4991033 - 4990989
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| |||||||||||||||  |||||||||| ||||||||||||    
T  4991033 acactccgacaccgctaatagtttgagaaaattacataattcagt 4990989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 11493427 - 11493383
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||    
T  11493427 acacgtcgacaccactaataatgtgagaaaatcacataattcagt 11493383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 11610514 - 11610558
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||| ||||||||||||| || | ||||||||||||||||||    
T  11610514 acacgccaacaccgctaataatttaaaaaaatcacataattcagt 11610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 14829677 - 14829724
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  14829677 acactgacacgccgacacagctaataatttga-aaaatcacataattca 14829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 16192816 - 16192772
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||| ||||||||| |||||| |||||||||| ||||||||||||    
T  16192816 acacaccgacaccgttaataatttgagaaaataacataattcagt 16192772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 23870625 - 23870581
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  23870625 acacgtcgacaccgctaataatttgaaaaaatcatataattcagt 23870581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 25074782 - 25074822
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  25074782 acacgccgacaccgataataatttgagaaaatgacataatt 25074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 26508103 - 26508147
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  26508103 acacgctgacacagctaataatttgaaaaaatcacataattcagt 26508147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 28917994 - 28918038
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||  |||||||| |||| ||||||||||||||||||    
T  28917994 acacgccgacatagctaataatttgaaaaaatcacataattcagt 28918038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 388 - 424
Target Start/End: Complemental strand, 32804602 - 32804566
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataatt 424  Q
    |||||||||| |||||| |||||||||||||||||||    
T  32804602 gccgacaccgttaataatttgagaaaatcacataatt 32804566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 34910310 - 34910354
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34910310 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 9809 - 9737
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||||| || ||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||||||||||||    
T  9809 gccgacgccactaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 9737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 461
Target Start/End: Original strand, 1028 - 1103
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 461  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  1028 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 13387 - 13437
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  13387 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 13437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 21940 - 21890
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  21940 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 21890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 51798 - 51848
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  51798 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 51848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 460
Target Start/End: Original strand, 20165 - 20239
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtg 460  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| ||||    
T  20165 acacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 53173 - 53217
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||    
T  53173 acacgccgataccgccaataatttgagaaaatcacataattcagt 53217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 135378 - 135309
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 455  Q
    |||| ||||||| |||||||| |||||||||||||||||||| || ||  ||| |||||||| |||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgta--attatatgtgtcggtgtcgtgt 135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 461
Target Start/End: Complemental strand, 44584 - 44516
Alignment:
Q  391 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 461  Q
    ||||||||||| || ||||||||||||||||||||||| ||  ||| |||||||| || |||||| |||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcggtatcgtgtcggtgt 44516  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 426
Target Start/End: Original strand, 28834 - 28885
Alignment:
Q  375 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    |||||||| |||||||||||||| |||||| || |||||||| |||||||||    
T  28834 cgaacactaacacgccgacaccgttaataatttaagaaaatcgcataattca 28885  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 192321 - 192274
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 425  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||||    
T  192321 acactgacacgccgacaccgttaataatttgagaaaattacataattc 192274  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 462
Target Start/End: Complemental strand, 263430 - 263362
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 462  Q
    |||| |||||||| ||||||||| ||||||||||||| ||  ||| || ||||||||||||||| ||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgta--attataagtgtcagtgtcgtgtcggtgtc 263362  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 468
Target Start/End: Original strand, 241581 - 241669
Alignment:
Q  378 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    ||||| |||||||||||| |||||||| |||  |||||||||||||| ||| ||  ||| |  ||||| ||||||||||||||||| ||||    
T  241581 acactgacacgccgacacagctaataatttggaaaaatcacataatttagtgta--attatgagtgtcggtgtcgtgttggtgtcggacac 241669  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 26386 - 26428
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattca 426  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||    
T  26386 acacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 3911 - 3833
Alignment:
Q  388 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 468  Q
    |||||||| | |||||| || | |||||||||||||||||| |||  ||  | ||||||||||||||||||||||| ||||    
T  3911 gccgacacggttaataatttaaaaaaatcacataattcagtgtaa--ttacaagtgtcagtgtcgtgttggtgtcggacac 3833  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 469
Target Start/End: Complemental strand, 68299 - 68225
Alignment:
Q  393 caccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 469  Q
    ||||| |||||| |||||||||||| |||||| ||| |||  || || ||||||||||||| | |||||||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataa--ttataggtgtcagtgtcgtatcggtgtcgaacaca 68225  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 1637 - 1677
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataatt 424  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  1637 acacgccgacaccgttaataatttgagaaaatcatataatt 1677  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 14523 - 14567
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagt 14567  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 33429 - 33385
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagt 33385  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 63774 - 63810
Alignment:
Q  392 acaccgctaataaattgagaaaatcacataattcagt 428  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagt 63810  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 46675 - 46719
Alignment:
Q  384 acacgccgacaccgctaataaattgagaaaatcacataattcagt 428  Q
    |||||||||||| | |||||| |||| ||||||||||||||||||    
T  46675 acacgccgacacagttaataatttgaaaaaatcacataattcagt 46719  T

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