View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1563_high_18 (Length: 246)

Name: NF1563_high_18
Description: NF1563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1563_high_18
NF1563_high_18
[»] chr7 (57 HSPs)
chr7 (1-231)||(38391582-38391806)
chr7 (5-168)||(759166-759327)
chr7 (5-168)||(11373503-11373664)
chr7 (5-120)||(34947441-34947554)
chr7 (8-120)||(21390235-21390346)
chr7 (9-120)||(25571361-25571469)
chr7 (5-120)||(28202384-28202497)
chr7 (5-120)||(41506140-41506253)
chr7 (5-120)||(21350700-21350814)
chr7 (5-120)||(27920927-27921042)
chr7 (6-161)||(21760060-21760213)
chr7 (5-173)||(6495009-6495174)
chr7 (5-120)||(83325-83439)
chr7 (5-120)||(36790679-36790794)
chr7 (1-120)||(47045542-47045653)
chr7 (5-119)||(7457496-7457607)
chr7 (5-60)||(3178279-3178334)
chr7 (5-120)||(19271808-19271920)
chr7 (5-120)||(44424086-44424198)
chr7 (5-120)||(48608808-48608920)
chr7 (5-61)||(2459469-2459525)
chr7 (5-53)||(7463219-7463267)
chr7 (5-61)||(16904377-16904433)
chr7 (5-53)||(24516364-24516412)
chr7 (5-61)||(46478368-46478424)
chr7 (5-61)||(49101661-49101717)
chr7 (5-120)||(9785929-9786042)
chr7 (5-120)||(28103671-28103787)
chr7 (5-120)||(37245631-37245744)
chr7 (5-120)||(43873864-43873977)
chr7 (5-54)||(32018991-32019040)
chr7 (27-120)||(40076259-40076350)
chr7 (5-61)||(8592515-8592571)
chr7 (5-61)||(23670484-23670540)
chr7 (5-120)||(31930572-31930690)
chr7 (22-61)||(29198772-29198811)
chr7 (7-53)||(17828428-17828473)
chr7 (5-67)||(32346127-32346189)
chr7 (27-120)||(42935599-42935690)
chr7 (5-53)||(13961965-13962013)
chr7 (5-53)||(22738707-22738755)
chr7 (5-61)||(34100622-34100678)
chr7 (12-56)||(37490378-37490422)
chr7 (12-56)||(37490466-37490510)
chr7 (5-48)||(17610913-17610956)
chr7 (9-60)||(24122556-24122607)
chr7 (78-116)||(24516435-24516473)
chr7 (136-170)||(26973918-26973952)
chr7 (5-51)||(35333051-35333097)
chr7 (135-168)||(3178404-3178437)
chr7 (5-54)||(32018787-32018836)
chr7 (78-119)||(33819154-33819195)
chr7 (81-117)||(4075515-4075551)
chr7 (81-117)||(4102045-4102081)
chr7 (5-53)||(26974032-26974080)
chr7 (5-53)||(30865973-30866021)
chr7 (5-53)||(45724982-45725030)
[»] chr4 (67 HSPs)
chr4 (5-168)||(49428416-49428576)
chr4 (5-120)||(35380407-35380521)
chr4 (5-120)||(26147689-26147805)
chr4 (5-168)||(21240778-21240935)
chr4 (5-120)||(35311297-35311412)
chr4 (5-120)||(22129976-22130090)
chr4 (5-120)||(33790805-33790920)
chr4 (5-119)||(49746895-49747008)
chr4 (5-120)||(5841501-5841615)
chr4 (5-61)||(10754364-10754420)
chr4 (5-61)||(10968133-10968189)
chr4 (5-61)||(36985777-36985833)
chr4 (5-120)||(6643734-6643846)
chr4 (5-120)||(7061738-7061851)
chr4 (5-120)||(47773093-47773206)
chr4 (9-120)||(51624720-51624829)
chr4 (5-120)||(38405176-38405290)
chr4 (5-61)||(17237370-17237426)
chr4 (5-120)||(42616977-42617090)
chr4 (5-120)||(49176008-49176122)
chr4 (5-67)||(50264154-50264216)
chr4 (5-61)||(47464439-47464495)
chr4 (5-61)||(53412099-53412155)
chr4 (5-120)||(11907673-11907786)
chr4 (5-117)||(44536270-44536381)
chr4 (5-67)||(6609746-6609808)
chr4 (78-120)||(25233116-25233158)
chr4 (27-117)||(28911252-28911340)
chr4 (7-117)||(54506725-54506833)
chr4 (5-54)||(18741548-18741597)
chr4 (5-54)||(32884799-32884848)
chr4 (5-54)||(47359023-47359072)
chr4 (5-117)||(2653357-2653467)
chr4 (5-61)||(10672644-10672700)
chr4 (5-61)||(10886284-10886340)
chr4 (5-61)||(16821405-16821461)
chr4 (27-120)||(28500979-28501072)
chr4 (5-61)||(34360646-34360702)
chr4 (5-61)||(43237234-43237290)
chr4 (5-53)||(44526378-44526426)
chr4 (5-61)||(52247502-52247558)
chr4 (5-61)||(53346750-53346806)
chr4 (5-120)||(52859873-52859981)
chr4 (77-119)||(5618483-5618525)
chr4 (12-54)||(43902249-43902291)
chr4 (78-120)||(47359116-47359158)
chr4 (5-55)||(49579252-49579302)
chr4 (5-63)||(54202185-54202243)
chr4 (5-66)||(31370374-31370435)
chr4 (5-53)||(11288703-11288751)
chr4 (78-117)||(21698654-21698693)
chr4 (15-54)||(35251897-35251936)
chr4 (81-120)||(49579324-49579363)
chr4 (5-120)||(2066725-2066836)
chr4 (78-120)||(3098416-3098458)
chr4 (27-61)||(10699505-10699539)
chr4 (27-61)||(10913275-10913309)
chr4 (27-65)||(25142475-25142513)
chr4 (5-59)||(38502556-38502610)
chr4 (15-61)||(41458642-41458688)
chr4 (9-63)||(48914226-48914280)
chr4 (5-54)||(19265806-19265855)
chr4 (78-115)||(30471794-30471831)
chr4 (76-117)||(37868705-37868746)
chr4 (7-52)||(43967611-43967656)
chr4 (5-53)||(17114439-17114487)
chr4 (5-53)||(25233180-25233228)
[»] chr6 (36 HSPs)
chr6 (5-168)||(29363190-29363353)
chr6 (5-120)||(6801864-6801978)
chr6 (5-120)||(11656013-11656127)
chr6 (5-171)||(3720308-3720472)
chr6 (15-120)||(21010105-21010210)
chr6 (5-169)||(30716784-30716947)
chr6 (5-66)||(13909410-13909471)
chr6 (5-120)||(181491-181603)
chr6 (2-61)||(10923442-10923501)
chr6 (5-67)||(3291835-3291897)
chr6 (5-66)||(13087516-13087577)
chr6 (5-117)||(15058055-15058164)
chr6 (5-53)||(34657629-34657677)
chr6 (5-60)||(17828932-17828987)
chr6 (5-60)||(24983516-24983571)
chr6 (5-63)||(16205225-16205283)
chr6 (5-120)||(23142602-23142714)
chr6 (27-169)||(31283490-31283624)
chr6 (5-172)||(32440712-32440879)
chr6 (78-119)||(23397755-23397796)
chr6 (5-61)||(15046115-15046170)
chr6 (5-61)||(31894277-31894333)
chr6 (5-120)||(5302285-5302398)
chr6 (5-120)||(7920175-7920286)
chr6 (27-119)||(21425646-21425738)
chr6 (5-120)||(1781739-1781849)
chr6 (5-54)||(21804595-21804644)
chr6 (78-117)||(34299931-34299970)
chr6 (5-59)||(11143654-11143708)
chr6 (78-120)||(12307732-12307774)
chr6 (78-120)||(21478233-21478275)
chr6 (78-120)||(27367237-27367279)
chr6 (78-120)||(27457584-27457626)
chr6 (78-111)||(1956117-1956150)
chr6 (76-120)||(8115160-8115204)
chr6 (5-53)||(22398412-22398460)
[»] chr3 (47 HSPs)
chr3 (7-120)||(44301495-44301607)
chr3 (5-120)||(10366717-10366830)
chr3 (5-120)||(37773032-37773147)
chr3 (5-117)||(29024033-29024138)
chr3 (5-120)||(36460484-36460597)
chr3 (2-120)||(37497425-37497542)
chr3 (5-119)||(3313187-3313301)
chr3 (5-61)||(12904855-12904911)
chr3 (5-60)||(19823003-19823058)
chr3 (5-116)||(39043825-39043932)
chr3 (5-61)||(11632072-11632128)
chr3 (5-120)||(30190728-30190841)
chr3 (5-120)||(36476518-36476631)
chr3 (5-117)||(37311886-37311997)
chr3 (5-109)||(37695734-37695837)
chr3 (5-59)||(30682134-30682188)
chr3 (5-59)||(38705168-38705222)
chr3 (5-120)||(43253931-43254045)
chr3 (5-61)||(8679122-8679178)
chr3 (8-66)||(1778629-1778687)
chr3 (9-67)||(3901221-3901279)
chr3 (5-116)||(23068137-23068245)
chr3 (78-120)||(30710583-30710625)
chr3 (5-54)||(23004450-23004499)
chr3 (2-120)||(40462255-40462369)
chr3 (5-54)||(45710848-45710897)
chr3 (5-53)||(28690850-28690898)
chr3 (5-61)||(30711064-30711120)
chr3 (77-120)||(37804672-37804715)
chr3 (78-120)||(43715240-43715282)
chr3 (5-53)||(11905821-11905869)
chr3 (14-66)||(14194542-14194594)
chr3 (5-61)||(17652743-17652799)
chr3 (5-53)||(19611908-19611956)
chr3 (5-53)||(36463014-36463062)
chr3 (5-61)||(49447859-49447915)
chr3 (78-117)||(27549425-27549464)
chr3 (78-117)||(37741532-37741571)
chr3 (78-117)||(48541131-48541170)
chr3 (78-120)||(1778319-1778361)
chr3 (5-51)||(24569168-24569214)
chr3 (78-120)||(27471269-27471311)
chr3 (136-169)||(24569294-24569327)
chr3 (12-53)||(41351639-41351680)
chr3 (27-67)||(5323027-5323067)
chr3 (5-61)||(12736640-12736696)
chr3 (80-120)||(42469820-42469860)
[»] chr2 (42 HSPs)
chr2 (5-120)||(34120503-34120616)
chr2 (5-117)||(5272205-5272314)
chr2 (5-120)||(14523438-14523551)
chr2 (5-120)||(35313821-35313934)
chr2 (5-120)||(5789714-5789826)
chr2 (5-120)||(17695262-17695377)
chr2 (5-120)||(9458332-9458444)
chr2 (5-120)||(36354509-36354621)
chr2 (5-120)||(45235513-45235628)
chr2 (10-168)||(7494909-7495066)
chr2 (5-117)||(43410363-43410473)
chr2 (5-120)||(3323338-3323451)
chr2 (5-168)||(25637366-25637528)
chr2 (5-67)||(37322413-37322475)
chr2 (5-66)||(8947118-8947179)
chr2 (5-119)||(16377722-16377833)
chr2 (5-61)||(28170649-28170705)
chr2 (5-61)||(35242363-35242419)
chr2 (5-120)||(39785519-39785632)
chr2 (5-59)||(15359153-15359207)
chr2 (5-120)||(16463621-16463736)
chr2 (5-120)||(19937318-19937432)
chr2 (5-120)||(34451401-34451511)
chr2 (5-53)||(17346428-17346476)
chr2 (6-54)||(31448760-31448808)
chr2 (78-169)||(34120658-34120749)
chr2 (5-120)||(36794218-36794331)
chr2 (5-119)||(26863424-26863539)
chr2 (5-67)||(39691475-39691537)
chr2 (9-54)||(18853271-18853316)
chr2 (5-66)||(34225576-34225637)
chr2 (1-53)||(18202104-18202156)
chr2 (22-119)||(25904722-25904818)
chr2 (81-120)||(7491089-7491128)
chr2 (78-117)||(19444083-19444122)
chr2 (27-61)||(1206779-1206813)
chr2 (5-59)||(11742594-11742648)
chr2 (15-61)||(43699672-43699718)
chr2 (78-119)||(11366719-11366760)
chr2 (87-120)||(28186148-28186181)
chr2 (5-61)||(7438918-7438974)
chr2 (5-53)||(39329730-39329777)
[»] chr1 (70 HSPs)
chr1 (5-120)||(39864045-39864158)
chr1 (5-120)||(37506058-37506171)
chr1 (5-117)||(52429279-52429391)
chr1 (5-119)||(7759150-7759262)
chr1 (5-120)||(24991724-24991838)
chr1 (5-119)||(40144918-40145030)
chr1 (5-120)||(6785190-6785303)
chr1 (5-120)||(20209911-20210024)
chr1 (5-164)||(38787228-38787388)
chr1 (5-67)||(36701906-36701968)
chr1 (5-67)||(36718010-36718072)
chr1 (5-66)||(7351622-7351683)
chr1 (5-66)||(37276447-37276508)
chr1 (1-53)||(9307626-9307678)
chr1 (5-117)||(2572405-2572516)
chr1 (5-120)||(12039016-12039129)
chr1 (5-120)||(35367736-35367849)
chr1 (5-120)||(49224057-49224170)
chr1 (5-61)||(13579692-13579748)
chr1 (5-61)||(22856308-22856364)
chr1 (5-60)||(25089157-25089212)
chr1 (5-59)||(15699115-15699169)
chr1 (5-67)||(26093379-26093441)
chr1 (5-67)||(34031598-34031660)
chr1 (1-59)||(37539120-37539178)
chr1 (5-120)||(6160530-6160634)
chr1 (78-119)||(12151123-12151164)
chr1 (5-114)||(916967-917071)
chr1 (1-53)||(4441670-4441722)
chr1 (12-120)||(4659711-4659816)
chr1 (5-61)||(6023720-6023776)
chr1 (5-53)||(8896403-8896451)
chr1 (84-120)||(10495773-10495809)
chr1 (5-53)||(10495838-10495886)
chr1 (5-53)||(16395117-16395165)
chr1 (5-120)||(23169064-23169175)
chr1 (5-61)||(27721523-27721579)
chr1 (5-61)||(44761602-44761658)
chr1 (78-117)||(3312056-3312095)
chr1 (76-119)||(37275536-37275579)
chr1 (5-63)||(5179470-5179528)
chr1 (5-119)||(28748926-28749038)
chr1 (5-63)||(39887824-39887882)
chr1 (78-120)||(41121965-41122007)
chr1 (3-120)||(26256157-26256272)
chr1 (5-66)||(30755012-30755073)
chr1 (5-53)||(9412874-9412922)
chr1 (5-61)||(14757665-14757721)
chr1 (80-120)||(15699074-15699114)
chr1 (35-120)||(26252560-26252645)
chr1 (5-53)||(27896954-27897002)
chr1 (5-53)||(31042796-31042844)
chr1 (27-120)||(35682887-35682977)
chr1 (5-53)||(44707831-44707879)
chr1 (134-168)||(16395243-16395277)
chr1 (78-120)||(17988887-17988929)
chr1 (78-120)||(21910150-21910192)
chr1 (78-120)||(31042731-31042773)
chr1 (5-54)||(3260589-3260638)
chr1 (5-117)||(9379169-9379279)
chr1 (5-50)||(32970638-32970683)
chr1 (75-120)||(45775442-45775487)
chr1 (83-120)||(52837217-52837254)
chr1 (5-53)||(2137440-2137488)
chr1 (136-168)||(9307512-9307544)
chr1 (5-61)||(26258011-26258067)
chr1 (80-116)||(27687265-27687301)
chr1 (77-117)||(29074817-29074857)
chr1 (5-61)||(37177827-37177883)
chr1 (5-53)||(42409993-42410041)
[»] chr8 (46 HSPs)
chr8 (5-120)||(5053222-5053334)
chr8 (5-119)||(45425735-45425848)
chr8 (5-120)||(22771904-22772017)
chr8 (5-119)||(29226597-29226708)
chr8 (5-120)||(34948756-34948867)
chr8 (5-120)||(36006956-36007071)
chr8 (5-117)||(10180016-10180126)
chr8 (5-116)||(17719327-17719436)
chr8 (5-120)||(26626181-26626294)
chr8 (5-120)||(4428420-4428531)
chr8 (5-55)||(5356597-5356647)
chr8 (5-120)||(13335151-13335263)
chr8 (5-171)||(40996434-40996594)
chr8 (5-53)||(27294128-27294176)
chr8 (5-117)||(31231667-31231777)
chr8 (5-61)||(32678394-32678450)
chr8 (5-61)||(42886991-42887047)
chr8 (5-53)||(43719305-43719353)
chr8 (5-61)||(44761563-44761619)
chr8 (5-120)||(9300182-9300297)
chr8 (5-120)||(17823856-17823968)
chr8 (13-119)||(39405697-39405801)
chr8 (5-50)||(21216170-21216215)
chr8 (5-66)||(32476273-32476334)
chr8 (5-53)||(10098060-10098108)
chr8 (5-60)||(31271013-31271068)
chr8 (2-49)||(34057684-34057731)
chr8 (5-120)||(39301025-39301138)
chr8 (5-120)||(39482546-39482662)
chr8 (5-61)||(7172905-7172961)
chr8 (5-53)||(11977005-11977053)
chr8 (77-117)||(21216239-21216279)
chr8 (5-53)||(31082618-31082666)
chr8 (5-61)||(35504940-35504996)
chr8 (5-61)||(35732112-35732168)
chr8 (78-117)||(50753-50792)
chr8 (78-117)||(396751-396790)
chr8 (78-117)||(32678353-32678392)
chr8 (78-120)||(10953872-10953914)
chr8 (78-120)||(10961877-10961919)
chr8 (78-115)||(1875879-1875916)
chr8 (79-120)||(13831713-13831754)
chr8 (79-120)||(25285098-25285139)
chr8 (78-115)||(34455815-34455852)
chr8 (12-61)||(40028503-40028552)
chr8 (5-41)||(31331419-31331455)
[»] chr5 (36 HSPs)
chr5 (5-118)||(19929882-19929993)
chr5 (5-120)||(6315843-6315956)
chr5 (5-120)||(6753963-6754076)
chr5 (5-116)||(21060569-21060677)
chr5 (5-168)||(40899804-40899965)
chr5 (5-119)||(6753724-6753836)
chr5 (5-61)||(29570383-29570439)
chr5 (5-120)||(4818484-4818598)
chr5 (5-67)||(27542780-27542842)
chr5 (5-120)||(1248670-1248783)
chr5 (5-120)||(8698242-8698356)
chr5 (75-168)||(2588197-2588290)
chr5 (5-119)||(40530290-40530403)
chr5 (11-119)||(9515668-9515777)
chr5 (5-61)||(31655044-31655100)
chr5 (5-61)||(42803686-42803742)
chr5 (5-120)||(41496014-41496127)
chr5 (5-120)||(41062226-41062338)
chr5 (5-54)||(7827992-7828041)
chr5 (5-66)||(8725075-8725136)
chr5 (5-53)||(4441020-4441068)
chr5 (5-53)||(18841478-18841526)
chr5 (5-60)||(11796233-11796288)
chr5 (15-61)||(2232145-2232191)
chr5 (5-120)||(6615946-6616059)
chr5 (78-119)||(29374128-29374169)
chr5 (5-61)||(22848450-22848506)
chr5 (5-61)||(29374333-29374389)
chr5 (10-54)||(30512757-30512801)
chr5 (10-54)||(30553097-30553141)
chr5 (1-61)||(41478818-41478877)
chr5 (1-61)||(41492293-41492352)
chr5 (5-120)||(3348196-3348309)
chr5 (5-120)||(27580540-27580647)
chr5 (8-53)||(37101274-37101319)
chr5 (12-53)||(39325862-39325903)
[»] scaffold0328 (1 HSPs)
scaffold0328 (5-120)||(8049-8163)
[»] scaffold0159 (1 HSPs)
scaffold0159 (5-120)||(34087-34199)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-120)||(252873-252984)
[»] scaffold0068 (1 HSPs)
scaffold0068 (5-49)||(56664-56708)
[»] scaffold0583 (1 HSPs)
scaffold0583 (5-67)||(2010-2072)
[»] scaffold0110 (2 HSPs)
scaffold0110 (5-67)||(1689-1751)
scaffold0110 (78-168)||(1442-1532)
[»] scaffold0095 (1 HSPs)
scaffold0095 (13-119)||(50139-50243)
[»] scaffold0330 (1 HSPs)
scaffold0330 (5-53)||(5389-5437)
[»] scaffold0294 (1 HSPs)
scaffold0294 (5-120)||(16973-17082)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-67)||(105669-105731)
[»] scaffold1809 (1 HSPs)
scaffold1809 (8-61)||(755-808)
[»] scaffold0182 (1 HSPs)
scaffold0182 (5-61)||(20421-20477)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-61)||(76283-76328)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 38391806 - 38391582
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||         | |||||||     |||||||||||    
T  38391806 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataaaagtataataatgaaaaaaaa-ataataaat-----attgatattat 38391713  T
Q  101 aaagtgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagtaataatttagaagcatcgagctaccaaatcgat 200  Q
    ||||||||||||||||||||            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38391712 aaagtgacaattattttgagaaaaagaaaaaatggtaaagagacaattattgtgagacggagggagtaataatttagaagcatcgagctaccaaatcgat 38391613  T
Q  201 agccaattagggttgccaaagggactcttgt 231  Q
    |||||||||||||||||||||||||||||||    
T  38391612 agccaattagggttgccaaagggactcttgt 38391582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 759166 - 759327
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||| |||||| |||||       |  |||||||| ||||||| |||| |||||    
T  759166 ttaattgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatggaaaaaaat--aataaatgctgcattggtattctaaag 759263  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||||||||||||||            |||||||||||||||||| |||||||||||||||||    
T  759264 tgacaattattttgagaaaaagaaaagatggtaaagagacaattattgtgagacggagggagta 759327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 11373503 - 11373664
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||       |  |||||||| |||||||||||| |||||    
T  11373503 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatagtgggaaaaaat--aataaatgctgcattgatattgtaaag 11373600  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    | ||||||||||||||            ||||||||||||||| || |||||||||||||||||    
T  11373601 taacaattattttgagaaaaagaaaaaatggtaaagagacaataattgtgagacggagggagta 11373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 34947554 - 34947441
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| || |||||| |||||       |  |||||||||||||||| |||| |||||    
T  34947554 ttaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataataatggaaaaaaat--aataaatgttgcattggtattctaaag 34947457  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  34947456 tgacaattattttgag 34947441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 21390346 - 21390235
Alignment:
Q  8 attgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtga 107  Q
    ||||||||||||||| || ||||||| |||||||||||||||||||| |||||| |||||        | |||||| ||||||||| |||||||||||||    
T  21390346 attgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaa-ataataaacgttgcattggtattataaagtga 21390248  T
Q  108 caattattttgag 120  Q
    |||||||||||||    
T  21390247 caattattttgag 21390235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 25571469 - 25571361
Alignment:
Q  9 ttgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgac 108  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||          | |||||||||||||||| |||| |||||||||    
T  25571469 ttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataat---taaaaaaataataaatgttgcattggtattctaaagtgac 25571373  T
Q  109 aattattttgag 120  Q
    ||||||||||||    
T  25571372 aattattttgag 25571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 28202384 - 28202497
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||||||||| |||||       |  |||||||| || |||| |||| |||||    
T  28202384 ttaattgtagttagtggagtagtaaagttggatgaaattcaataaataagagtataataatggaaaaaaat--aataaatgctgtattggtattctaaag 28202481  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  28202482 tgacaattattttgag 28202497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 41506140 - 41506253
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||        |  ||||||| ||||||||||||| |||||    
T  41506140 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatattgaaaaaaatt--aataaatattgcattgatattgtaaag 41506237  T
Q  105 tgacaattattttgag 120  Q
    ||| ||||||||||||    
T  41506238 tgataattattttgag 41506253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 21350700 - 21350814
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||| | |||        | |||||||| ||||||| |||| |||||    
T  21350700 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaa-ataataaatgctgcattggtattgtaaag 21350798  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  21350799 tgacaattattttgag 21350814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27921042 - 27920927
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || |||||||||||||| |||||| ||||||||||| | |||||        | ||||||||||||||| ||||| |||||    
T  27921042 ttaattgtagttagtgcattagttaagttggatgaagttcaatcaataagagtattataatggggaaaaaaataataaatgttgcattaatattctaaag 27920943  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  27920942 tgacaattattttgag 27920927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 21760060 - 21760213
Alignment:
Q  6 taattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagt 105  Q
    |||||||||||| |||| || ||||||||||||||||||||||| | || |||||| || ||       || ||||||||||||||||||||| ||||||    
T  21760060 taattgtagttaatggagtagttaagttggatgaaattcaataattgagggtataataaaggaaaaa--tataataaatgttgcattgatattctaaagt 21760157  T
Q  106 gacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacgga 161  Q
    |||||||||||||||            |||||||||||||||||| ||||||||||    
T  21760158 gacaattattttgagaaaaagaaaaactggtaaagagacaattattgtgagacgga 21760213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 6495009 - 6495174
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || | ||||||||||||||| |||||||||| |||||| ||||         |||||||||| | |||||||||| |||||    
T  6495009 ttaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataatg---aaaaaaaaaataaatgctacattgatattctaaag 6495105  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagtaataat 173  Q
    ||||||||||||||||             |||||||||||||||||  |||||||||||||||| ||||    
T  6495106 tgacaattattttgagaaaaagaaaaatgggtaaagagacaattattatgagacggagggagtagtaat 6495174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 83439 - 83325
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||| ||| || ||||||| ||||||||||||||||||||||||| | |||||        | |||||||| ||||||| |||| |||||    
T  83439 ttaattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatggaaaaaaa-ataataaatgctgcattggtattctaaag 83341  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  83340 tgacaattattttgag 83325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 36790794 - 36790679
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||| || || ||| || ||||||||||||||||||||| |||||| |||||        | |||||||| ||||||| |||| |||||    
T  36790794 ttaattgtagttagttgagtagttatgtcggatgaaattcaataaataagggtataataatggaaaaaataataataaatgctgcattgctattctaaag 36790695  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  36790694 tgacaattattttgag 36790679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 47045542 - 47045653
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattat 100  Q
    |||||||||||| ||||||| | || |||||||||||||||||||| |||||||||||||| | |||        |||| ||| ||||||||| |||| |    
T  47045542 cttgttaattgtggttagtgtagtagttaagttggatgaaattcaacaaataagagtataatagtgg--------aaaaaaaaagttgcattggtattct 47045633  T
Q  101 aaagtgacaattattttgag 120  Q
    ||||||||||||||||||||    
T  47045634 aaagtgacaattattttgag 47045653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 7457496 - 7457607
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||| ||||||||| ||||||||||||||  || ||||||||||||||||||||||| | |||        | ||||||||||||||||||||| |||||    
T  7457496 ttaaatgtagttagcggaataattaagttaaattaaattcaataaataagagtataatagtggaaaaa---ataataaatgttgcattgatattgtaaag 7457592  T
Q  105 tgacaattattttga 119  Q
    ||| |||||||||||    
T  7457593 tgataattattttga 7457607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 3178279 - 3178334
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  3178279 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtata 3178334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 19271808 - 19271920
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||||||| | |||||||||| |||||| | |||        | |||||||||||||||| |||| |||||    
T  19271808 ttaattgtagttagtggagtagttaagttggatgaaaattaataaataagggtataatattggaaaaa---ataataaatgttgcattggtattgtaaag 19271904  T
Q  105 tgacaattattttgag 120  Q
    | ||||||||||||||    
T  19271905 taacaattattttgag 19271920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 44424198 - 44424086
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||| | ||||         | |||||||| |||||||||||| |||||    
T  44424198 ttaaatgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatg---aaaaaaataataaatgctgcattgatattttaaag 44424102  T
Q  105 tgacaattattttgag 120  Q
    ||| ||||||||||||    
T  44424101 tgataattattttgag 44424086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 48608920 - 48608808
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||| ||||||||||   || ||||||||||||||||||||||||||||||||||| |||||        | |||||||  |||||| ||||| |||||    
T  48608920 ttaatcgtagttagtgatgtagttaagttggatgaaattcaataaataagagtataataatggaaaaa---ataataaatactgcattaatattttaaag 48608824  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  48608823 tgacaattattttgag 48608808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 2459525 - 2459469
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||    
T  2459525 ttaattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtataa 2459469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 7463267 - 7463219
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||    
T  7463267 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataa 7463219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 16904433 - 16904377
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  16904433 ttaattatagttagtgaaataattaagttggatcaaattcaataaataagggtataa 16904377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 24516364 - 24516412
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||    
T  24516364 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataa 24516412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 46478368 - 46478424
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| | || || |||||||||||||||||||||||||||||||||||    
T  46478368 ttaattgtagttaattgagtagttaagttggatgaaattcaataaataagagtataa 46478424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 49101717 - 49101661
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||| |||||||    
T  49101717 ttaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaagtataa 49101661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 9786042 - 9785929
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || ||||||||||| |||||||||||||||| |||||| || |        |  |||||||| |||||| ||||| |||||    
T  9786042 ttaattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataataaagaaaaataat--aataaatgctgcattaatattttaaag 9785945  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  9785944 tgacaattattttgag 9785929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 28103787 - 28103671
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaa-aataaatgttgcattgatattataaa 103  Q
    |||||||||||||||| | |  |||||||||||||||||||||||||||| |||||| | |||        || ||||||||||||| |  |||| ||||    
T  28103787 ttaattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataatagtggaaaaaaaaaataataaatgttgcaattgtattgtaaa 28103688  T
Q  104 gtgacaattattttgag 120  Q
    |||||||||||||||||    
T  28103687 gtgacaattattttgag 28103671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 37245744 - 37245631
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||| | |||||| |  |||||||||||||||||||||||||||| |||||| | ||        |||  |||||||||||||| |||| |||||    
T  37245744 ttaattgtaataagtggagtggttaagttggatgaaattcaataaataagggtataatagtgagaaaaaataa--taaatgttgcattggtattgtaaag 37245647  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  37245646 tgacaattattttgag 37245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 43873977 - 43873864
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||| ||||||||||||| || |||||||||||||| || |||||||||  |||| | |||||       |||  |||||| |||||||||||| |||||    
T  43873977 ttaaatgtagttagtggagtagttaagttggatgaagtttaataaataaatgtattataatgggaaaaaataa--taaatgctgcattgatattctaaag 43873880  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  43873879 tgacaattattttgag 43873864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 32018991 - 32019040
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  32018991 ttaattgttgttagtggagtaattaagttggatgaaatttaataaataag 32019040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 40076350 - 40076259
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||||||||||||||| || | | |||||       |||  |||||| ||||||| ||||||||||||||||||||||||||    
T  40076350 ttaagttggatgaaattcaataaataagggtgtgataatggaaaaaaataa--taaatgctgcattggtattataaagtgacaattattttgag 40076259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 8592515 - 8592571
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || | ||||| ||||||||| |||||||||||||||||    
T  8592515 ttaattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataa 8592571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 23670540 - 23670484
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||| |||||||||||| || ||||||| ||||||||| |||||||||||||||||    
T  23670540 ttaatggtagttagtggagtagttaagtttgatgaaatttaataaataagagtataa 23670484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 31930572 - 31930690
Alignment:
Q  5 ttaattgtagttagtgga--ataattaagttggatgaaattcaataaataaga--gtataacaatggnnnnnnntaaaataaatgttgcattgatattat 100  Q
    ||||||||||||||||||  ||| ||||||| |||||||||||||||||||||  || ||| || ||        | |||||||||| |||||||||| |    
T  31930572 ttaattgtagttagtggagtatagttaagtttgatgaaattcaataaataagagtgtttaataaagggaaaaaa-ataataaatgtttcattgatattct 31930670  T
Q  101 aaagtgacaattattttgag 120  Q
    ||||||||||||||||||||    
T  31930671 aaagtgacaattattttgag 31930690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 29198772 - 29198811
Alignment:
Q  22 aataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  29198772 aataattaagtttgatgaaattcaataaataagagtataa 29198811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 17828428 - 17828473
Alignment:
Q  7 aattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  17828428 aattgtagttagtggagtaattaagttggatg-aattcaataaataa 17828473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 32346127 - 32346189
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||| || |||||||| || |||||||| ||||||||||||||||||| |||||| |||||    
T  32346127 ttaattataattagtggagtagttaagttgaatgaaattcaataaataagggtataataatgg 32346189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 42935690 - 42935599
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||| |||||||||||||||||| | ||| |       |||  |||||||||||||  |||| |||||||||||||||||||||    
T  42935690 ttaagttggatgaagttcaataaataagagtattataattggaaaaaataa--taaatgttgcatttgtattctaaagtgacaattattttgag 42935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 13962013 - 13961965
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||| ||||||||||||| || ||||||||||||||||| |||||||||    
T  13962013 ttaagtgtagttagtggagtagttaagttggatgaaatttaataaataa 13961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 22738755 - 22738707
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||||| || || ||||||||||||||||| |||||||||    
T  22738755 ttaattgtagttagtagattagttaagttggatgaaatttaataaataa 22738707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 34100622 - 34100678
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| || | || ||||||||||||| |||||||||||||| ||||||    
T  34100622 ttaattgtagttactgaagtagttaagttggatgacattcaataaataagggtataa 34100678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 37490422 - 37490378
Alignment:
Q  12 tagttagtggaataattaagttggatgaaattcaataaataagag 56  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  37490422 tagttagtggagtaattaaattgaatgaaattcaataaataagag 37490378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 37490510 - 37490466
Alignment:
Q  12 tagttagtggaataattaagttggatgaaattcaataaataagag 56  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  37490510 tagttagtggagtaattaaattgaatgaaattcaataaataagag 37490466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 17610956 - 17610913
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaata 48  Q
    ||||||||||||| || |||| ||||||||||||||||||||||    
T  17610956 ttaattgtagttattgaaatagttaagttggatgaaattcaata 17610913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 24122607 - 24122556
Alignment:
Q  9 ttgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    |||||||||||| ||||| ||||| | |||||||||||||||||||| ||||    
T  24122607 ttgtagttagtgaaataaataagtagaatgaaattcaataaataagaatata 24122556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 24516435 - 24516473
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattt 116  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  24516435 aataaatgttgcattgatattgtaaaatgacaattattt 24516473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 26973952 - 26973918
Alignment:
Q  136 taaagagacaattatcgtgagacggagggagtaat 170  Q
    ||||||||||||||| |||||||||||||||||||    
T  26973952 taaagagacaattattgtgagacggagggagtaat 26973918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 35333097 - 35333051
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaat 51  Q
    |||||||||||||||||| || ||||||| |||||||||||| ||||    
T  35333097 ttaattgtagttagtggagtagttaagttagatgaaattcaacaaat 35333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 3178404 - 3178437
Alignment:
Q  135 gtaaagagacaattatcgtgagacggagggagta 168  Q
    |||||||||||||||| |||||||||||||||||    
T  3178404 gtaaagagacaattattgtgagacggagggagta 3178437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 32018787 - 32018836
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||||| |||||| || |||||||||||||| ||||| ||||||||||    
T  32018787 ttaattgtcgttagtagagtaattaagttggattaaatttaataaataag 32018836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 33819195 - 33819154
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttga 119  Q
    |||||||| ||||||| |||| ||||||||||||||||||||    
T  33819195 aataaatgctgcattggtattgtaaagtgacaattattttga 33819154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 4075551 - 4075515
Alignment:
Q  81 aaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  4075551 aaatgatgcattgatattgtaaagtgacaattatttt 4075515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 4102081 - 4102045
Alignment:
Q  81 aaatgttgcattgatattataaagtgacaattatttt 117  Q
    |||||||||||||||||| |||||||| |||||||||    
T  4102081 aaatgttgcattgatattctaaagtgagaattatttt 4102045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 26974080 - 26974032
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||||||| |||||||| | |||||||    
T  26974080 ttaattgtagttagtggagtagttaagttgaatgaaatttattaaataa 26974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 30866021 - 30865973
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||| || |||||||| || ||||||| |||||||||||||||||||    
T  30866021 ttaattataattagtggagtagttaagttagatgaaattcaataaataa 30865973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 45724982 - 45725030
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||| ||||| |||||||||| ||||||||||||||| |||| ||||    
T  45724982 ttaattttagttggtggaataatcaagttggatgaaatttaatatataa 45725030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 49428416 - 49428576
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||       |  |||||||||||||||||| || |||||    
T  49428416 ttaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataataatggaaaaaagt--aataaatgttgcattgat-ttctaaag 49428512  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||||||||||||||            |||||||||||||||||| |||||||||||||||||    
T  49428513 tgacaattattttgagaaaaagaaaaaatggtaaagagacaattattgtgagacggagggagta 49428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 35380407 - 35380521
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||        | |||||||||||||||| ||||||||||    
T  35380407 ttaattgtagttagtggagtggttaagttggatgaaattcaataaataagagtataataatggaaaaaaa-ataataaatgttgcattggtattataaag 35380505  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  35380506 tgacaattattttgag 35380521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 26147689 - 26147805
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaatt-caataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaa 103  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||| |||||       |||||||||||||| |||| |||| ||||    
T  26147689 ttaattgtagttagtggagtaattaagttggatgaattttcaataaataagggtataataatggaaaaaaataaaataaatgttgtattggtattctaaa 26147788  T
Q  104 gtgacaattattttgag 120  Q
    |||||||||||||||||    
T  26147789 gtgacaattattttgag 26147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 21240778 - 21240935
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||| |||||| |||||        || |||||||||||||||||||| |||||    
T  21240778 ttaattgtagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaa------aatataaatgttgcattgatattctaaag 21240871  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||| ||||||||||            ||||||||||| |||||| |||||||||||||||||    
T  21240872 tgacatttattttgagaaaaataaaaattggtaaagagataattattgtgagacggagggagta 21240935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 35311297 - 35311412
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| | |||        | |||||||||||||||| |||| |||||    
T  35311297 ttaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataatattggaaaaaataataataaatgttgcattggtattgtaaag 35311396  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  35311397 tgacaattattttgag 35311412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 22130090 - 22129976
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||        | |||||||||||||||| |||| ||||     
T  22130090 ttaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataataatggaaaaaaa-ataataaatgttgcattggtattgtaaaa 22129992  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  22129991 tgacaattattttgag 22129976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 33790805 - 33790920
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||        |||||||||| ||| |||  ||| |||||    
T  33790805 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataataatggaaagaaaaaaaataaatgctgcgttggaattctaaag 33790904  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  33790905 tgacaattattttgag 33790920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 49747008 - 49746895
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| |||||||| || || |||||||||||||||||||||||||||| |||||| |||||        | |||||||||||||||| |||| |||||    
T  49747008 ttaattatagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaaaaata-ataataaatgttgcattggtattgtaaag 49746910  T
Q  105 tgacaattattttga 119  Q
    |||||||||||||||    
T  49746909 tgacaattattttga 49746895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 5841501 - 5841615
Alignment:
Q  5 ttaattgtagttagtggaataatt-aagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaa 103  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||  |||||| |||||       |  |||||||| |||||||||||| ||||    
T  5841501 ttaattgtagttagtggagtagtttaagttggatgaaattcaataaataaaggtataataatggaaattaat--aataaatgatgcattgatattctaaa 5841598  T
Q  104 gtgacaattattttgag 120  Q
    |||||||||||||||||    
T  5841599 gtgacaattattttgag 5841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10754420 - 10754364
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  10754420 ttaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataa 10754364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10968189 - 10968133
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  10968189 ttaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataa 10968133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 36985833 - 36985777
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36985833 ttaattgtagttagtagaataattaagttggatgaaattcaataaataagggtataa 36985777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 6643734 - 6643846
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| | |||         ||||||||| ||| |||| ||| |||||    
T  6643734 ttaattgtagttagtggtatagttaagttggatgaaattcaataaataagggtataatagtggaaaaat---aaataaatgctgcgttgaaattgtaaag 6643830  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  6643831 tgacaattattttgag 6643846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 7061738 - 7061851
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| | ||        |  ||||||||||| ||||||||| |||||    
T  7061738 ttaattgtagttagtggattaattaagttgaatgaaattcaataaataagggtataatagtgaaaataaat--aataaatgttgtattgatattttaaag 7061835  T
Q  105 tgacaattattttgag 120  Q
    | ||||||||||||||    
T  7061836 taacaattattttgag 7061851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 47773093 - 47773206
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||| |||| | |||||       |  |||||||| ||||||| |||| |||||    
T  47773093 ttaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatggaaaaaaat--aataaatgctgcattggtattctaaag 47773190  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  47773191 tgacaattattttgag 47773206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 51624829 - 51624720
Alignment:
Q  9 ttgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgac 108  Q
    |||||||||||||| || |||||||||||||||||||||||||||| |||| | | |||       |  |||||||||| |||||||||| |||||||||    
T  51624829 ttgtagttagtggagtagttaagttggatgaaattcaataaataagggtatgatagtggaaaaaaat--aataaatgttacattgatattgtaaagtgac 51624732  T
Q  109 aattattttgag 120  Q
    ||||||||||||    
T  51624731 aattattttgag 51624720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 38405176 - 38405290
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||  |||||| |||||          |||||||||||||||| |||| |||||    
T  38405176 ttaattgtagttagtggtgtagttaagttggatgaaattcaataaataaaggtataataatggaaaaaaa-gtaataaatgttgcattgctattctaaag 38405274  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  38405275 tgacaattattttgag 38405290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 17237370 - 17237426
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| ||||||    
T  17237370 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataa 17237426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 42616977 - 42617090
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||| |||||| || |||||| | ||||||||||||||||||| |||||| |||||       |  |||||||||||||||  |||| |||||    
T  42616977 ttaattgtagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataataatggaaaataat--aataaatgttgcatttgtattctaaag 42617074  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  42617075 tgacaattattttgag 42617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 49176008 - 49176122
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||| ||| || ||||||||||| |||||||||||||||| |||||| | |||        | ||||| |||||||||| |||| |||||    
T  49176008 ttaattgtagttagcggagtagttaagttggataaaattcaataaataagggtataatagtgggaaaaaa-ataataattgttgcattggtattctaaag 49176106  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  49176107 tgacaattattttgag 49176122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 50264154 - 50264216
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||||||| |||||| |||||    
T  50264154 ttaattgtagttagtgaaatatttaagttgaatgaaattcaataaataagggtataataatgg 50264216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 47464439 - 47464495
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||    
T  47464439 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtataa 47464495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 53412155 - 53412099
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  53412155 ttaattatagtttgtggaatagttaagttggatgaaattcaataaataaaagtataa 53412099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 11907673 - 11907786
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| || |||||||||||||| ||||||||||||  |||| | |||||       |  |||||||| ||||||| |||| |||||    
T  11907673 ttaattgtagttattggagtagttaagttggatgaagttcaataaataaatgtattataatggaaaaaaat--aataaatgctgcattggtattctaaag 11907770  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  11907771 tgacaattattttgag 11907786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 44536270 - 44536381
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||  |||||| |||||||||||| ||||||| |||||| | |||       ||||||||||| ||||||  |||| |||||    
T  44536270 ttaattgtagttagtggagtagctaagttagatgaaattcaa-aaataagggtataatagtggaaaagaataaaataaatgctgcattagtattgtaaag 44536368  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  44536369 tgacaattatttt 44536381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 6609808 - 6609746
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    ||||||||| ||| |||| || ||||||||||||||| ||||||||||||||||||| |||||    
T  6609808 ttaattgtaattattggagtagttaagttggatgaaactcaataaataagagtataataatgg 6609746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 25233158 - 25233116
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  25233158 aataaatgttgcattgatattctaaagtgacaattattttgag 25233116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 28911252 - 28911340
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||| ||||||||||||||||||||||||||| |||||       |  ||||||||||||||||||||| ||||  ||||||||||||    
T  28911252 ttaagtttgatgaaattcaataaataagagtataataatggaaaaaaat--aataaatgttgcattgatattctaaatcgacaattatttt 28911340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 54506833 - 54506725
Alignment:
Q  7 aattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtg 106  Q
    |||||||||||||||| || ||||||| ||||||||||||| ||||||| ||||| ||||        |  |||||||||||||| |||||||||||| |    
T  54506833 aattgtagttagtggagtagttaagtttgatgaaattcaattaataagaatataataatgaaaaataat--aataaatgttgcatcgatattataaagcg 54506736  T
Q  107 acaattatttt 117  Q
    | |||||||||    
T  54506735 ataattatttt 54506725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 18741548 - 18741597
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  18741548 ttaattgtagttaatggagtagttaagttggatgaaattcaataaataag 18741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 32884848 - 32884799
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||    
T  32884848 ttaattgtagttagtggagtagttaagttggatggaattcaataaataag 32884799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 47359023 - 47359072
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  47359023 ttaattgtagtcagtggagtaattaagttgaatgaaattcaataaataag 47359072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 2653467 - 2653357
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||  ||| || |||| |||||||||||| |||||||||  |||||| |||||       |||  ||||||||||||||||||| |||||    
T  2653467 ttaattgtagttaaaggagtagttaaattggatgaaatttaataaataaaggtataataatggaaaaagataa--taaatgttgcattgatattctaaag 2653370  T
Q  105 tgacaattatttt 117  Q
    |||||| ||||||    
T  2653369 tgacaactatttt 2653357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10672700 - 10672644
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| |||| | || |||| |||||||||||||||||||||||||||||||||||    
T  10672700 ttaattttagtcaatgaaatagttaagttggatgaaattcaataaataagagtataa 10672644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10886340 - 10886284
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| |||| | || |||| |||||||||||||||||||||||||||||||||||    
T  10886340 ttaattttagtcaatgaaatagttaagttggatgaaattcaataaataagagtataa 10886284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 16821405 - 16821461
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| ||||||||||| || |||||||| ||||||||||||||||||| ||||||    
T  16821405 ttaattatagttagtggagtatttaagttgaatgaaattcaataaataagggtataa 16821461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 28500979 - 28501072
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||| |||||||||||||||||||| |||||| |||||        | ||||||||||| |||| |||| ||||| |||||||||||||||    
T  28500979 ttaagtttgatgaaattcaataaataagggtataataatgggaaaaaaaataataaatgttgtattggtattctaaagagacaattattttgag 28501072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34360702 - 34360646
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || |||||||| || |||||||||||||||| ||||||    
T  34360702 ttaattgtagttagtggagtagttaagttgaataaaattcaataaataagggtataa 34360646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 43237290 - 43237234
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| ||||||||| | || |||||||||||||||||||||||||||| ||||||    
T  43237290 ttaattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtataa 43237234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 44526426 - 44526378
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  44526426 ttaattgtagttagtggaatagtgaagttggatgaaatttaataaataa 44526378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 52247502 - 52247558
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || |||||||| |||||||||| |||||||| ||||||    
T  52247502 ttaattgtagttagtggagtagttaagttgaatgaaattcattaaataagtgtataa 52247558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 53346806 - 53346750
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| ||||||||||| || ||||||| |||||||||||||||||| ||||||||    
T  53346806 ttaattttagttagtggagtagttaagtttgatgaaattcaataaatatgagtataa 53346750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 52859873 - 52859981
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| |||||||||||||     | |||||| |||||       |||  |||||||||||||| |||| |||||    
T  52859873 ttaattgtagttagtggagtagttaagttgaatgaaattcaata-----gggtataataatgggaaaaaataa--taaatgttgcattggtattctaaag 52859965  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  52859966 tgacaattattttgag 52859981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 5618525 - 5618483
Alignment:
Q  77 aaataaatgttgcattgatattataaagtgacaattattttga 119  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  5618525 aaataaatgctgcattgatattttaaagtgacaattattttga 5618483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 43902291 - 43902249
Alignment:
Q  12 tagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  43902291 tagttagtggagtaattaagttgcatgaaattcaataaataag 43902249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 47359116 - 47359158
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  47359116 aataaatgttacattgatattataaagagacaattattttgag 47359158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 49579252 - 49579302
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataaga 55  Q
    ||||||||||||| || |||  |||||||||||||||||||||||||||||    
T  49579252 ttaattgtagttattgaaattgttaagttggatgaaattcaataaataaga 49579302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 54202243 - 54202185
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataaca 63  Q
    ||||||||| |||||| | ||||| ||| |||||||||||||||||||||| |||||||    
T  54202243 ttaattgtaattagtgaagtaattgagtgggatgaaattcaataaataagaatataaca 54202185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 31370374 - 31370435
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    |||||| ||||||||||| || ||||||||||||||| |||||||||||  |||||| ||||    
T  31370374 ttaattatagttagtggagtagttaagttggatgaaaatcaataaataaatgtataataatg 31370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 11288703 - 11288751
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||||    
T  11288703 ttaattgtagttggtggagtagttaagttggataaaattcaataaataa 11288751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 21698654 - 21698693
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  21698654 aataaatattgcattgatattttaaagtgacaattatttt 21698693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 35251936 - 35251897
Alignment:
Q  15 ttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  35251936 ttagtggagtaattaagttagatgaaattcaataaataag 35251897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 49579324 - 49579363
Alignment:
Q  81 aaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  49579324 aaatattgcattgatattttaaagtgacaattattttgag 49579363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 2066836 - 2066725
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| ||||||||||  || ||||||| |||||||||||||||||||  |||||| ||||         | |||||||| | ||||| |||| |||||    
T  2066836 ttaattttagttagtggggtagttaagttagatgaaattcaataaataaaggtataataatg----aaaaaataataaatgcttcattggtattctaaag 2066741  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  2066740 tgacaattattttgag 2066725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 3098458 - 3098416
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  3098458 aataaatgttgcattgatattttaacgtgataattattttgag 3098416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 10699505 - 10699539
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||||| |||||||||||||||||    
T  10699505 ttaagttggatgaaatttaataaataagagtataa 10699539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 10913275 - 10913309
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||||| |||||||||||||||||    
T  10913275 ttaagttggatgaaatttaataaataagagtataa 10913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 25142475 - 25142513
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaat 65  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  25142475 ttaagttggatgaaattcaataaataaggatataacaat 25142513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 38502556 - 38502610
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    |||||| |||||| || | || ||||||||||| |||||||||||||||||||||    
T  38502556 ttaattatagttaatgtagtagttaagttggataaaattcaataaataagagtat 38502610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 41458688 - 41458642
Alignment:
Q  15 ttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| |||||||||||||||| ||||||||||||| || ||||||    
T  41458688 ttagtgaaataattaagttggataaaattcaataaattagtgtataa 41458642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 48914226 - 48914280
Alignment:
Q  9 ttgtagttagtggaataattaagttggatgaaattcaataaataagagtataaca 63  Q
    |||||||||||| | ||||||||||  |||||||||||||||| || ||||||||    
T  48914226 ttgtagttagtgaagtaattaagtttaatgaaattcaataaattagggtataaca 48914280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 19265855 - 19265806
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||| ||||||||||| || |||||||| |||||||||||||| ||||    
T  19265855 ttaattatagttagtggagtagttaagttgaatgaaattcaataattaag 19265806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 30471831 - 30471794
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatt 115  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  30471831 aataaatgttgcattgatattttaaagagacaattatt 30471794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 37868705 - 37868746
Alignment:
Q  76 aaaataaatgttgcattgatattataaagtgacaattatttt 117  Q
    |||| ||||||||||||||||||  |||||||||||||||||    
T  37868705 aaaaaaaatgttgcattgatattcaaaagtgacaattatttt 37868746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 43967611 - 43967656
Alignment:
Q  7 aattgtagttagtggaataattaagttggatgaaattcaataaata 52  Q
    ||||||||| ||| ||||| ||||||| ||||||||||||||||||    
T  43967611 aattgtagtcagtagaatagttaagtttgatgaaattcaataaata 43967656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 17114487 - 17114439
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||| ||||| ||| ||||||||||||    
T  17114487 ttaattgtagttagtggagtagttaatttggaggaagttcaataaataa 17114439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 25233228 - 25233180
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||| ||||||||| | || |||||||||||||| ||||||||||||    
T  25233228 ttaattatagttagtgaagtagttaagttggatgaagttcaataaataa 25233180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 29363353 - 29363190
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| |||||        | |||||||| ||||||| |||| | |||    
T  29363353 ttaattgtagttagcggattagttaagttggatgaaattcaataaataagagtataataatggaaaaaataataataaatgctgcattggtattctgaag 29363254  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||||||||||||||            |||||||||||||||||| |||||||||||||||||    
T  29363253 tgacaattattttgagaaaaagaaaagatggtaaagagacaattattgtgagacggagggagta 29363190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 6801978 - 6801864
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||| ||| ||||||||| |||| | |||||        | |||||||||||||||||||||||||||    
T  6801978 ttaattgtagttagtggagtagttaagttggatgaagttcgataaataagggtattataatggaaaaaaa-ataataaatgttgcattgatattataaag 6801880  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  6801879 tgacaattattttgag 6801864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 11656013 - 11656127
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || | |||||||||||||||||||||||||| |||||| |||||        | |||||||| |||||||||||| |||||    
T  11656013 ttaattgtagttagtggagtagtaaagttggatgaaattcaataaataagggtataataatgggaaaaaa-ataataaatgctgcattgatattctaaag 11656111  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  11656112 tgacaattattttgag 11656127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 3720308 - 3720472
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| | |||        |||||||||| |||||||  ||| ||||     
T  3720308 ttaattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataatagtggggggga--aaaataaatgatgcattggcattgtaaat 3720405  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagtaata 171  Q
    ||||||||||||||||            || |||||||||||| || ||||||||||||||||||||    
T  3720406 tgacaattattttgagaaaaagaaaaaatgataaagagacaataattgtgagacggagggagtaata 3720472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 21010210 - 21010105
Alignment:
Q  15 ttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattat 114  Q
    |||||||| || ||||||||||||||||||||||||||| ||||||| |||||        |  ||||||| ||||||| ||||||||||||||||||||    
T  21010210 ttagtggagtagttaagttggatgaaattcaataaataacagtataataatggaaaaaaaaattataaatgctgcattggtattataaagtgacaattat 21010111  T
Q  115 tttgag 120  Q
    ||||||    
T  21010110 tttgag 21010105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 30716947 - 30716784
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || | ||||||||| ||||||||||||||||||||| | |||||        | ||||||||||||| || |||| |||||    
T  30716947 ttaattgtagttagtggagtagtaaagttggataaaattcaataaataagagtattataatggaaaaaaa-ataataaatgttgcactggtattctaaag 30716849  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagtaa 169  Q
    ||||||||||||||||             |||||| |||||||||| ||||||||||||||||||    
T  30716848 tgacaattattttgagaaaaagaaaaatgggtaaaaagacaattattgtgagacggagggagtaa 30716784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 13909471 - 13909410
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||    
T  13909471 ttaattgtagttagtggagtaattaagttagatgaaattgaataaataagagtataataatg 13909410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 181603 - 181491
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| ||||||||||| || |||||||||||||||||||||||||||| |||||| | ||        |  |||||||||||||||| |||| |||||    
T  181603 ttaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtgaaaaataat--aataaatgttgcattg-tattgtaaag 181507  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  181506 tgacaattattttgag 181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 10923442 - 10923501
Alignment:
Q  2 ttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||    
T  10923442 ttgttaattgtagctagtggaataattaaattagatgaaattcaataaataagaatataa 10923501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 3291835 - 3291897
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||| | || ||||||||||| |||||||||||||||| ||||||||||||    
T  3291835 ttaattgtagttagtgaagtagttaagttggataaaattcaataaataagtgtataacaatgg 3291897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 13087577 - 13087516
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||    
T  13087577 ttaattatagttagtgaagtaattaagttggatgaaattcaataaataagaatataataatg 13087516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 15058164 - 15058055
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||| ||||   ||| |        | |||||||||||||| | ||||||||||    
T  15058164 ttaattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtat---aatagtacaaaaaataataaatgttgcatcggtattataaag 15058068  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  15058067 tgacaattatttt 15058055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 34657629 - 34657677
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||    
T  34657629 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataa 34657677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 17828987 - 17828932
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    |||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||    
T  17828987 ttaattgtagttagtgaagtaattaagttggatgaaatttaattaataagagtata 17828932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 24983516 - 24983571
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||| |||||    
T  24983516 ttaattgtagttagtggagtagttaagttgggtgaaattcaataaataagggtata 24983571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 16205225 - 16205283
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataaca 63  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||||| ||| ||||    
T  16205225 ttaattgtagttagtggaatatttaagttagatgaaactcaataaataagtgtacaaca 16205283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 23142714 - 23142602
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||| ||||||| || ||||| | |||||||||||||||| ||| |||||| |||||        |  |||||||||||||||||||| |||||    
T  23142714 ttaattgtaggtagtggagtagttaagctagatgaaattcaataaagaag-gtataataatgggaaaaa--acgataaatgttgcattgatattgtaaag 23142618  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  23142617 tgacaattattttgag 23142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 31283490 - 31283624
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttgagnnnnnn 126  Q
    ||||||||||||||||||||||||||||  ||||| |||||         ||| ||||||||||||| |||| |||||||| ||||||||||||          
T  31283490 ttaagttggatgaaattcaataaataaggatataataatggg--------aaaaaaatgttgcattgttattttaaagtgataattattttgagaaaaat 31283581  T
Q  127 nnnnnntggtaaagagacaattatcgtgagacggagggagtaa 169  Q
          |||||||||||||||||| ||||||||| ||||||||    
T  31283582 aaaaaatggtaaagagacaattattgtgagacggggggagtaa 31283624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 32440712 - 32440879
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattat--aa 102  Q
    ||||||||| ||||| || || ||||||||||||||||  |||||||||  ||| || |||||       |||  |||||| |||||||||||| |  ||    
T  32440712 ttaattgtaattagtagagtagttaagttggatgaaatgtaataaataaaggtacaataatggaaaataataa--taaatgctgcattgatattttctaa 32440809  T
Q  103 agtgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagtaataa 172  Q
    ||||||||||||||||||            |||||||||||||||||| |||||||||||||||||||||    
T  32440810 agtgacaattattttgagaaaaagaaaaaatggtaaagagacaattattgtgagacggagggagtaataa 32440879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 23397755 - 23397796
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttga 119  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  23397755 aataaatgttgcattgatattctaaagtgacaattattttga 23397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 15046170 - 15046115
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||    
T  15046170 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataa 15046115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 31894277 - 31894333
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||| | || ||||||||||||||||| |||||||||| ||||||    
T  31894277 ttaattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataa 31894333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 5302398 - 5302285
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| || |||||||||||||| ||||||||||| | |||| | |||||       |  |||||||| ||||||  |||| |||||    
T  5302398 ttaattgtagttaatggagtagttaagttggatgaagttcaataaatacgggtattataatggaaaaaaat--aataaatgctgcattagtattctaaag 5302301  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  5302300 tgacaattattttgag 5302285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 7920286 - 7920175
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || |||| ||| ||||||||||||||||||  |||||| | ||          |||||||||||||||||||||| |||||    
T  7920286 ttaattgtagttagtgaagtatttaatttgaatgaaattcaataaataatggtataatagtgaaaaat----aaataaatgttgcattgatattctaaag 7920191  T
Q  105 tgacaattattttgag 120  Q
    ||| ||||||||||||    
T  7920190 tgataattattttgag 7920175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 21425646 - 21425738
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttga 119  Q
    ||||||||||||||||||||||||||||  |||||   |||        | ||||||||||||||||||||| |||||| |||||||||||||    
T  21425646 ttaagttggatgaaattcaataaataaggatataatggtggaaaaaataataataaatgttgcattgatattgtaaagtaacaattattttga 21425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 1781849 - 1781739
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| ||| |||||| | |||        |||| |||||||||| ||||||| |||||    
T  1781849 ttaattgtagttagtggagtg-ttaagttgaatgaaattcaataaaaaag-gtataatagtgggaaga---aaaaaaaatgttgcaatgatattgtaaag 1781755  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  1781754 tgacaattattttgag 1781739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 21804595 - 21804644
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||| ||||    
T  21804595 ttaattgtagttagtggaaaaattaagttggaagaaatttaataactaag 21804644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 34299970 - 34299931
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  34299970 aataaatgttgtattgatattctaaagtgacaattatttt 34299931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11143654 - 11143708
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    |||||| ||||||||| | || |||||||||||||| ||||||||||||| ||||    
T  11143654 ttaattatagttagtgaagtagttaagttggatgaagttcaataaataagggtat 11143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 12307732 - 12307774
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||    
T  12307732 aataaatgttgtattaatattttaaagtgacaattattttgag 12307774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 21478233 - 21478275
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||| |||| |||| |||||||||||||||||||||    
T  21478233 aataaatgttgtattggtattgtaaagtgacaattattttgag 21478275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 27367237 - 27367279
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||| ||||||| |||| |||||||||||||||||||||    
T  27367237 aataaatgatgcattggtattctaaagtgacaattattttgag 27367279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 27457584 - 27457626
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||| ||||||| |||| |||||||||||||||||||||    
T  27457584 aataaatgatgcattggtattctaaagtgacaattattttgag 27457626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 1956117 - 1956150
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaat 111  Q
    |||||||||||||||| |||||||||||||||||    
T  1956117 aataaatgttgcattgttattataaagtgacaat 1956150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 8115160 - 8115204
Alignment:
Q  76 aaaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||| ||||||||||||||||||  ||||||| ||||||||||||    
T  8115160 aaaaaaaatgttgcattgatattcgaaagtgataattattttgag 8115204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 22398460 - 22398412
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||| || | || ||||||| |||||||||||||||||||    
T  22398460 ttaattgtagttattgaagtagttaagttagatgaaattcaataaataa 22398412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 44301607 - 44301495
Alignment:
Q  7 aattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtg 106  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||||||| | |||       | || |||||||||||||||||||||||||||    
T  44301607 aattgtaattagtggagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaatattaa-taaatgttgcattgatattataaagtg 44301509  T
Q  107 acaattattttgag 120  Q
    ||||||||||||||    
T  44301508 acaattattttgag 44301495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 10366717 - 10366830
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||| |||||| |||||       |  |||||||||||||||| |||| |||||    
T  10366717 ttaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatgggaaaaaat--aataaatgttgcattggtattctaaag 10366814  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  10366815 tgacaattattttgag 10366830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 37773032 - 37773147
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| |||| ||||||||| |||||||| |||||||||| |||||||| |||||| |||||       ||||||||||| ||||||| |||| |||||    
T  37773032 ttaattatagtcagtggaatagttaagttgaatgaaattcattaaataagggtataataatggaaaaaaataaaataaatgctgcattggtattgtaaag 37773131  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  37773132 tgacaattattttgag 37773147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 29024033 - 29024138
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||        |||| ||||| | |||||||||| |||||    
T  29024033 ttaattgtagttagtggagtaattaagttggatgaaattcaataaataatggtataataatgga-------aaaaaaaatgctacattgatattctaaag 29024125  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  29024126 tgacaattatttt 29024138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 36460484 - 36460597
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| | |||       |  ||||||| ||||||||||||  |||||    
T  36460484 ttaattgtagttaatggagtaattaagttggatgaaattcaataaataagggtataatagtggaaacaaat--aataaatattgcattgatatcgtaaag 36460581  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  36460582 tgacaattattttgag 36460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 37497542 - 37497425
Alignment:
Q  2 ttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaa-aataaatgttgcattgatattat 100  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||  |||||| ||||        ||| ||||||||||| |||| ||||||    
T  37497542 ttgttaactgtagttagtggagtagttaagttggatgaaattcaataaataaacgtataataatg--aaaaaataataataaatgttgtattggtattat 37497445  T
Q  101 aaagtgacaattattttgag 120  Q
    ||||||||||||||||||||    
T  37497444 aaagtgacaattattttgag 37497425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 3313301 - 3313187
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||||| ||||| ||||         | |||||||| |||||| ||||| |||||    
T  3313301 ttaattgtagttaatggagtatttaagttggatgaaattcaataaataagattataataatgaaaataataataataaatgctgcatttatattgtaaag 3313202  T
Q  105 tgacaattattttga 119  Q
    |||||||||||||||    
T  3313201 tgacaattattttga 3313187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 12904911 - 12904855
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  12904911 ttaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataa 12904855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 19823058 - 19823003
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  19823058 ttaattgtagttagtggaatagttaagttggatgaaattcaataaataagggtata 19823003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 39043825 - 39043932
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||| |||||| ||||         | |||||||||||||||| |||| |||||    
T  39043825 ttaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtataataatg----aaaaaataataaatgttgcattggtattctaaag 39043920  T
Q  105 tgacaattattt 116  Q
    ||||||||||||    
T  39043921 tgacaattattt 39043932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 11632128 - 11632072
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  11632128 ttaattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataa 11632072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 30190728 - 30190841
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||||| ||| || |||||       |  |||||||||| ||||  |||| |||||    
T  30190728 ttaattgtagttagtggagtagttaagttggatgaaattcaattaataagggtaaaataatggaaattaat--aataaatgttacatttttattctaaag 30190825  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  30190826 tgacaattattttgag 30190841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 36476631 - 36476518
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||| || || ||||||| |||||||||||||||||||| |||||| ||| |       |  |||||||| ||||||| |||| |||||    
T  36476631 ttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtataataatagaaaaaagt--aataaatgctgcattggtattctaaag 36476534  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  36476533 tgacaattattttgag 36476518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 37311997 - 37311886
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||| ||  |||||||||||||||||||||||||| ||| |        | |||||||| |||||||||||| |||||    
T  37311997 ttaattgtagttagtggagtagttaaatttaatgaaattcaataaataagagtataataatagaaaaata-ataataaatgctgcattgatattgtaaag 37311899  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  37311898 tgacaattatttt 37311886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 37695734 - 37695837
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| |||||| |||||        | |||||||||||||||| |||| |||||    
T  37695734 ttaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaa-ataataaatgttgcattggtattctaaag 37695832  T
Q  105 tgaca 109  Q
    |||||    
T  37695833 tgaca 37695837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 30682134 - 30682188
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  30682134 ttaattgtagttaatggaataattaagttggacgaaattcaataaataatagtat 30682188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 38705222 - 38705168
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  38705222 ttaattgtagttagttgagtaattaagttagatgaaattcaataaataagagtat 38705168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 43253931 - 43254045
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||| |||||||||||| |||||||| |||||| | |||          |||||||||||||||| |||| |||||    
T  43253931 ttaattgtagttagtggagtagttaagtgggatgaaattcattaaataagggtataatagtggaaaaaaa-ctaataaatgttgcattggtattgtaaag 43254029  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  43254030 tgacaattattttgag 43254045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 8679122 - 8679178
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  8679122 ttaattatagttagtgaattaattaagttggatgaaattcaataaataagggtataa 8679178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 1778687 - 1778629
Alignment:
Q  8 attgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||| |||||| ||||    
T  1778687 attgtagttagtggagtagataagttggatgaaattcaataaataagggtataataatg 1778629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 3901221 - 3901279
Alignment:
Q  9 ttgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||  || |||||||||||||||||||||||||||| |||||| |||||    
T  3901221 ttgtagttagtggggtacttaagttggatgaaattcaataaataagggtataataatgg 3901279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 23068245 - 23068137
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||| ||| |||| ||||||| ||||||||||||||||||| ||||||| ||||         | ||||||||||| ||||||||| |||||    
T  23068245 ttaattgtagtttgtgaaatatttaagttagatgaaattcaataaataaaagtataataatg---acaaaaataataaatgttgtattgatattgtaaag 23068149  T
Q  105 tgacaattattt 116  Q
    | ||||||||||    
T  23068148 taacaattattt 23068137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 30710625 - 30710583
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  30710625 aataaatgttgcattgatattctaaagtgacaattattttgag 30710583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 23004450 - 23004499
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||||    
T  23004450 ttaattgtagttagtggagtagttaagttgtatgaaattcaataaataag 23004499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 40462369 - 40462255
Alignment:
Q  2 ttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattata 101  Q
    |||||||||||||||||  || || ||||||||||| ||||||||||||||   |||||| | |||        ||||||||||||||||||| ||| ||    
T  40462369 ttgttaattgtagttagaagagtagttaagttggataaaattcaataaatagttgtataatagtgggaaa----aaaataaatgttgcattgacattcta 40462274  T
Q  102 aagtgacaattattttgag 120  Q
    ||||||||| |||||||||    
T  40462273 aagtgacaactattttgag 40462255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 45710897 - 45710848
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||    
T  45710897 ttaattgtagttagtggagtagttaagttggatgaagttcaataaataag 45710848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 28690850 - 28690898
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  28690850 ttaattgtagttagtgagatagttaagttggatgaaattcaataaataa 28690898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30711120 - 30711064
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| ||||  ||||||||| ||||||||||||||||||||| |||||    
T  30711120 ttaattgtagttaatggagcaattaagttagatgaaattcaataaataagattataa 30711064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 37804715 - 37804672
Alignment:
Q  77 aaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  37804715 aaataaatgttgcattgatattctaaagggacaattattttgag 37804672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 43715282 - 43715240
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  43715282 aataaatgttacattgatattctaaagtgacaattattttgag 43715240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 11905869 - 11905821
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||||||    
T  11905869 ttaattgtagttaatggagttgttaagttggatgaaattcaataaataa 11905821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 14194594 - 14194542
Alignment:
Q  14 gttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    ||||||||| |||||||||||||||||||||||| |||||  |||||| ||||    
T  14194594 gttagtggagtaattaagttggatgaaattcaattaataaaggtataataatg 14194542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 17652799 - 17652743
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||||   || ||||||||||||||||| |||||||||| ||||||    
T  17652799 ttaattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataa 17652743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 19611956 - 19611908
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||| ||||||||| || ||||||| |||||||||||||||||||    
T  19611956 ttaattgttgttagtggagtagttaagtttgatgaaattcaataaataa 19611908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36463014 - 36463062
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||| ||| ||||| |||||||||||||||||||| |||||||||    
T  36463014 ttaattgttgtttgtggagtaattaagttggatgaaattaaataaataa 36463062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 49447859 - 49447915
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||| ||||| |||| || ||||||||| |||||||||| ||||||    
T  49447859 ttaattgtagttagtagaatagttaaatttgatgaaatttaataaataagggtataa 49447915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 27549425 - 27549464
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  27549425 aataaatgttgcattgatattgtaaagtgacagttatttt 27549464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 37741571 - 37741532
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  37741571 aataaatgttgtattgatattttaaagtgacaattatttt 37741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 48541131 - 48541170
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  48541131 aataaatgttgcactgatattataaaatgacaattatttt 48541170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 1778361 - 1778319
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||| |||||||||| | |||||||||||||||||||||    
T  1778361 aataaatgatgcattgatactgtaaagtgacaattattttgag 1778319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 24569168 - 24569214
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaat 51  Q
    |||||||||||||||||| || |||||||| |||||||||| |||||    
T  24569168 ttaattgtagttagtggagtagttaagttgaatgaaattcattaaat 24569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 27471311 - 27471269
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||| || |||| ||||||||||||||||||||||||||    
T  27471311 aataaatgctgtattggtattataaagtgacaattattttgag 27471269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 24569294 - 24569327
Alignment:
Q  136 taaagagacaattatcgtgagacggagggagtaa 169  Q
    ||||||||||||||| ||||||||||||||||||    
T  24569294 taaagagacaattattgtgagacggagggagtaa 24569327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 41351639 - 41351680
Alignment:
Q  12 tagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  41351639 tagttagtggagtagttaagttgaatgaaattcaataaataa 41351680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 5323027 - 5323067
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    ||||||| |||||||||||||||||||| |||||| |||||    
T  5323027 ttaagtttgatgaaattcaataaataagggtataataatgg 5323067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12736640 - 12736696
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||| |||||| | || |||| |||||| |||||||||||||||| ||||||    
T  12736640 ttaattgtacttagtgtagtagttaatttggataaaattcaataaataagggtataa 12736696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 42469820 - 42469860
Alignment:
Q  80 taaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||| |||| ||||| |||||||||||||||||||||    
T  42469820 taaatgttacattaatattttaaagtgacaattattttgag 42469860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 34120503 - 34120616
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||       |  |||||||| ||||||| |||| |||||    
T  34120503 ttaattgtagttagtggaatagttaagttggatgaaattcaataagtaagagtataataatggaaaaaaat--aataaatgctgcattggtattttaaag 34120600  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  34120601 tgacaattattttgag 34120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 5272205 - 5272314
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||        | |||||||||||||||  |||| |||||    
T  5272205 ttaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtataataatgggaaaa---ataataaatgttgcatttgtattctaaag 5272301  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  5272302 tgacaattatttt 5272314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 14523438 - 14523551
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||| ||||||||||||| ||||||  ||||| |||||       |||  ||||||||||||||||||| |||||    
T  14523438 ttaattgtagttagtggagtagttaagttagatgaaattcaattaataaggatataataatggaaaataataa--taaatgttgcattgatattctaaag 14523535  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  14523536 tgacaattattttgag 14523551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 35313934 - 35313821
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||| | |||       |  |||||||||||||||  |||| |||||    
T  35313934 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggaaaaaagt--aataaatgttgcattattattgtaaag 35313837  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  35313836 tgacaattattttgag 35313821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 5789714 - 5789826
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||  |||||| | |||        | |||||||| |||||||||||| |||||    
T  5789714 ttaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtggaaaaa---ataataaatgatgcattgatattgtaaag 5789810  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  5789811 tgacaattattttgag 5789826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 17695377 - 17695262
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| |||||||| || || |||||||||||||||||||||||||||| |||||| | |||        | |||||||| |||||||||||| |||||    
T  17695377 ttaattatagttagtagagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaataataataaatgctgcattgatattctaaag 17695278  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  17695277 tgacaattattttgag 17695262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 9458332 - 9458444
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || | ||||||||||||||| |||||||||| |||||| |||||        | |||||||| ||||||| |||| |||||    
T  9458332 ttaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataatggaaaaa---ataataaatgctgcattggtattctaaag 9458428  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  9458429 tgacaattattttgag 9458444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 36354509 - 36354621
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||  |||||| |||||        | |||||||  ||||||| |||| |||||    
T  36354509 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataataatggaaaaa---ataataaattctgcattggtattctaaag 36354605  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  36354606 tgacaattattttgag 36354621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 45235628 - 45235513
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| || |||| ||||||| ||||||||||||||||||||  ||||  ||||         | |||||||||||||||| ||||||||||    
T  45235628 ttaattgtagttaatgaaatagttaagtttgatgaaattcaataaataaggatatagtaatgaaaaaaataataataaatgttgcattggtattataaag 45235529  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  45235528 tgacaattattttgag 45235513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 7494909 - 7495066
Alignment:
Q  10 tgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgaca 109  Q
    ||||||||| ||| || |||||||||||||||||||||||||||| |||||| ||| |        | |||||||| ||||||| |||| ||||||||||    
T  7494909 tgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataat-gaaaaaaaaataataaatgctgcattggtattctaaagtgaca 7495007  T
Q  110 attattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    |||||||||||            |||||||||||||||||| ||||||||||| |||||    
T  7495008 attattttgagaaaaagaaaagatggtaaagagacaattattgtgagacggagtgagta 7495066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 43410473 - 43410363
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| || |||||||| |||||||||||||||| ||||||||| |||||       |  |||||||||||||||  |||| |||||    
T  43410473 ttaattgtagttaatggagtagttaagttgaatgaaattcaataaatgagagtataataatggaaaaaaat--aataaatgttgcattagtattctaaag 43410376  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  43410375 tgacaattatttt 43410363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 3323338 - 3323451
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||| | |||       |  |||||||| ||||||| |||| |||||    
T  3323338 ttaattgtagttagtggagtagttaagttggatgaaattcaataagtaagagtgtaatagtgggaaaaaat--aataaatgctgcattggtattgtaaag 3323435  T
Q  105 tgacaattattttgag 120  Q
    ||| ||||||||||||    
T  3323436 tgagaattattttgag 3323451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 25637528 - 25637366
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||  ||| || ||||||||||||||||| |||||||||| || ||| |||||        | |||||||| ||||||| |||| |||||    
T  25637528 ttaattgtagttataggagtagttaagttggatgaaatttaataaataagggtgtaataatggaaaaaaa-ataataaatgctgcattggtattctaaag 25637430  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||||||||||||||            |||||||||||||||||| |||||||| ||||||||    
T  25637429 tgacaattattttgagaaaaagtaaaaatggtaaagagacaattattgtgagacgaagggagta 25637366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 37322475 - 37322413
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| |||||| |||||    
T  37322475 ttaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatgg 37322413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 8947118 - 8947179
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    |||||| ||||||||||| || |||||||||||||||||||||||||||| |||||| ||||    
T  8947118 ttaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataataatg 8947179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 16377722 - 16377833
Alignment:
Q  5 ttaattgtagttagtgga----ataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattat 100  Q
    ||||||||||||||||||     |||||||||||||||||||||||||||||| ||||||| | ||         |||| |||||||||||||||||| |    
T  16377722 ttaattgtagttagtggagtagttaattaagttggatgaaattcaataaataaaagtataatagtg-------aaaaaaaaaatgttgcattgatattct 16377814  T
Q  101 aaagtgacaattattttga 119  Q
    ||| |||||||||||||||    
T  16377815 aaaatgacaattattttga 16377833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 28170649 - 28170705
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||    
T  28170649 ttaattgtagttaatagaataattaaattggatgaaattctataaataagagtataa 28170705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 35242363 - 35242419
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||| |||||||    
T  35242363 ttaattgtagttagttgagtagttaagttggatgaaattcaataaataaaagtataa 35242419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 39785632 - 39785519
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| || |||||||||||||| ||||||||||||| |||| | |||||       |  | |||||| ||||||| |||| |||||    
T  39785632 ttaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaat--agtaaatgctgcattggtattctaaag 39785535  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  39785534 tgacaattattttgag 39785519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 15359153 - 15359207
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||| ||||    
T  15359153 ttaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 15359207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 16463736 - 16463621
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || | ||||| ||||||||| |||||||||  ||| || |||||        | |||||||| ||||||| |||| |||||    
T  16463736 ttaattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaataatggaaaaaataataataaatgctgcattggtattctaaag 16463637  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  16463636 tgacaattattttgag 16463621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 19937432 - 19937318
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| || |||||||||||||||  |||||| |||||        ||| |||||||||||||| |||  |||||    
T  19937432 ttaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataataatgggaaaaaa-aaattaaatgttgcattgttatactaaag 19937334  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||| ||||    
T  19937333 tgacaattattatgag 19937318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 34451401 - 34451511
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| |||||| || |||| || ||||||||||||||||||||||||  | |||| | |||        ||| ||||||||||||||||||| |||||    
T  34451401 ttaattctagttattgaaatagtttagttggatgaaattcaataaataaaggcataatactgggaa-----aaattaaatgttgcattgatattctaaag 34451495  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  34451496 tgacaattattttgag 34451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 17346428 - 17346476
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||||    
T  17346428 ttaattgtagttagtggagtagttaagttggaagaaattcaataaataa 17346476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 31448760 - 31448808
Alignment:
Q  6 taattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||||||    
T  31448760 taattgcagttagtgaaatagttaagttggatgaaattcaataaataag 31448808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 34120658 - 34120749
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagtaa 169  Q
    |||||||| ||||||| |||| |||||||||||||||||||||            |||||||||| ||||||| ||||||||||||||||||    
T  34120658 aataaatgctgcattggtattttaaagtgacaattattttgagaaaaagaaaagatggtaaagaggcaattattgtgagacggagggagtaa 34120749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 36794331 - 36794218
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||| ||||||||||||| || |||||||||||||| ||||||||||||| |||| | ||||        |  |||||||| ||||||| |||| |||||    
T  36794331 ttaactgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaaat--aataaatgctgcattggtattttaaag 36794234  T
Q  105 tgacaattattttgag 120  Q
    ||| ||||||||||||    
T  36794233 tgataattattttgag 36794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 26863424 - 26863539
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg-nnnnnnntaaaataaatgttgcattgatattataaa 103  Q
    |||||||||||||||||| || |||||| |||||||||||| |||||||  |||||| | |||        || ||||||| || ||| |||||| ||||    
T  26863424 ttaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataatagtggaaaagaaatataataaattttacatagatattgtaaa 26863523  T
Q  104 gtgacaattattttga 119  Q
    ||||||||||||||||    
T  26863524 gtgacaattattttga 26863539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 39691537 - 39691475
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    ||||||| |||||||||| || | |||||| ||||||||||||||||||| |||||| |||||    
T  39691537 ttaattgcagttagtggagtagtaaagttgaatgaaattcaataaataagggtataataatgg 39691475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 18853271 - 18853316
Alignment:
Q  9 ttgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||    
T  18853271 ttgtagttagtagagtaattaatttggatgaaattcaataaataag 18853316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 34225637 - 34225576
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    ||||||||||||| |||| || |||||||| |||||||| |||||||||| |||||| ||||    
T  34225637 ttaattgtagttaatggagtatttaagttgaatgaaatttaataaataagggtataataatg 34225576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18202156 - 18202104
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||| ||||||||||| | || ||||||||||||||||| |||||||||    
T  18202156 cttgttaaatgtagttagtgaagtagttaagttggatgaaatttaataaataa 18202104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 25904818 - 25904722
Alignment:
Q  22 aataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttga 119  Q
    ||||||||||||| |||||||||||||||| || |||||| | |||        | |||||||| |||||| ||||| ||||||||||||||||||||    
T  25904818 aataattaagttgaatgaaattcaataaattagggtataatagtggaaaaata-ataataaatgatgcattaatattttaaagtgacaattattttga 25904722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 7491128 - 7491089
Alignment:
Q  81 aaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  7491128 aaatgtttcattgatattttaaagtgacaattattttgag 7491089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 19444122 - 19444083
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  19444122 aataaatgttgcattgatattttgaagtgacaattatttt 19444083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 1206779 - 1206813
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||||||||||| ||||||||    
T  1206779 ttaagttggatgaaattcaataaatatgagtataa 1206813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11742594 - 11742648
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    ||||||||||||| |||| || ||||||| |||||| ||||||||||||| ||||    
T  11742594 ttaattgtagttaatggagtagttaagtttgatgaagttcaataaataagggtat 11742648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43699672 - 43699718
Alignment:
Q  15 ttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||| |||||||||||||| |||||||||||| ||| ||||||    
T  43699672 ttagtggagtaattaagttggataaaattcaataaacaagggtataa 43699718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 11366760 - 11366719
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttga 119  Q
    ||||||||||||||||||||| |||| |||||| ||||||||    
T  11366760 aataaatgttgcattgatattgtaaaatgacaaatattttga 11366719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 28186181 - 28186148
Alignment:
Q  87 tgcattgatattataaagtgacaattattttgag 120  Q
    |||||| |||||||||||||||||||||||||||    
T  28186181 tgcatttatattataaagtgacaattattttgag 28186148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 7438918 - 7438974
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| || ||| |||| || |||||||| ||||||||||||||||||| ||||||    
T  7438918 ttaattataattattggagtagttaagttgaatgaaattcaataaataagggtataa 7438974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 39329730 - 39329777
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||| |||| || |||| ||||||||||||||||||||||    
T  39329730 ttaattgtagtta-tggagtagttaaattggatgaaattcaataaataa 39329777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 39864158 - 39864045
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||| | |||       |  ||||||||||||||||||||| |||||    
T  39864158 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaat--aataaatgttgcattgatattgtaaag 39864061  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  39864060 tgacaattattttgag 39864045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 37506171 - 37506058
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||| |||| | |||||       |||  ||||||||||||||||||| |||||    
T  37506171 ttaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtattataatggaaaaaaataa--taaatgttgcattgatattctaaag 37506074  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  37506073 tgacaattattttgag 37506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 52429391 - 52429279
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| |||||||||| |||||||| |||||| ||||         | ||||||||||||||||||||| |||||    
T  52429391 ttaattgtagttagtggagtagttaagttgaatgaaattcattaaataagggtataataatgagaaaaaaaataataaatgttgcattgatattgtaaag 52429292  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  52429291 tgacaattatttt 52429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 7759262 - 7759150
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||| |||||       |  |||||||| ||||||  |||| |||||    
T  7759262 ttaattgtagttagtggaatagttaagttgaatgaaattcaataaataagggtataataatggaaaaaaat--aataaatgatgcattattattgtaaag 7759165  T
Q  105 tgacaattattttga 119  Q
    |||||||||||||||    
T  7759164 tgacaattattttga 7759150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 24991724 - 24991838
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| | |||        | |||||||||||||||  |||| |||||    
T  24991724 ttaattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaa-ataataaatgttgcattagtattgtaaag 24991822  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  24991823 tgacaattattttgag 24991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 40144918 - 40145030
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| || |||||||||||||| ||||||||||||| |||| | |||||       |||  ||||||||||||||||||| |||||    
T  40144918 ttaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaataa--taaatgttgcattgatattctaaag 40145015  T
Q  105 tgacaattattttga 119  Q
    |||||||||||||||    
T  40145016 tgacaattattttga 40145030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 6785303 - 6785190
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| |||||| | |||       |  |||||||||||||| | |||| |||||    
T  6785303 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataatagtggaaaaaaat--aataaatgttgcataggtattgtaaag 6785206  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  6785205 tgacaattattttgag 6785190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 20209911 - 20210024
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||| |||| | |||||       |  |||||||| ||||||| |||| |||||    
T  20209911 ttaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaat--aataaatgctgcattggtattctaaag 20210008  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  20210009 tgacaattattttgag 20210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 38787388 - 38787228
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaat-ggnnnnnnntaaaataaatgttgcattgatattataaa 103  Q
    |||||| ||||||||||| || |||| ||||||||||||||||||||||| |||||| ||| ||        ||||||||| |||||||| | || ||||    
T  38787388 ttaattatagttagtggagtagttaaattggatgaaattcaataaataagggtataataatgggaaaaaaaaaaaataaattttgcattgcttttctaaa 38787289  T
Q  104 gtgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggaggg 164  Q
    |||||||||||||||||            |||||||||||||||||| |||||||||||||    
T  38787288 gtgacaattattttgagaaaaataaaaaatggtaaagagacaattattgtgagacggaggg 38787228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36701968 - 36701906
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||    
T  36701968 ttaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataataatgg 36701906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36718072 - 36718010
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||    
T  36718072 ttaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataataatgg 36718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 7351683 - 7351622
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  7351683 ttaattctagttagtggaataattaagttggacaaaattcaataaataagagtataataatg 7351622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 37276508 - 37276447
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||||    
T  37276508 ttaattgtagttagtggaatagttaaattggatgaaattcaataaataagggtataataatg 37276447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9307678 - 9307626
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  9307678 cttgttaattgtagttagtggagtagttaagttggatgaaattcaataaataa 9307626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 2572516 - 2572405
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||| | ||||| |||||       | |||||||| ||||||||||||| |||||    
T  2572516 ttaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaaatataataatggaaaaaaat-aaataaatattgcattgatattttaaag 2572418  T
Q  105 tgacaattatttt 117  Q
    || ||||| ||||    
T  2572417 tggcaattgtttt 2572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 12039129 - 12039016
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| |||| || |||||||||||| ||||||||||||||| |||||| | |||       |  |||||||||||||||  |||| |||||    
T  12039129 ttaattgtagttaatggagtatttaagttggatgtaattcaataaataagggtataatagtggaaaataat--aataaatgttgcattagtattgtaaag 12039032  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  12039031 tgacaattattttgag 12039016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 35367849 - 35367736
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| |||||| | ||        |  |||||||||| ||||| |||| |||||    
T  35367849 ttaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataatagtgaaaaagact--aataaatgtttcattggtattgtaaag 35367752  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  35367751 tgacaattattttgag 35367736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 49224057 - 49224170
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||| |||| | ||||        |  |||||||||||||||  |||| |||||    
T  49224057 ttaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaaat--aataaatgttgcattagtattctaaag 49224154  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  49224155 tgacaattattttgag 49224170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 13579692 - 13579748
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| ||||||    
T  13579692 ttaattgtagttagtggagtatttaagtttgatgaaattcaataaataagggtataa 13579748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 22856308 - 22856364
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||    
T  22856308 ttaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataa 22856364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 25089157 - 25089212
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||| |||||    
T  25089157 ttaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtata 25089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 15699169 - 15699115
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||| ||||    
T  15699169 ttaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 15699115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 26093441 - 26093379
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||| | |||||||||| |||||| ||||||||||||| |||||| |||||    
T  26093441 ttaattgtagttagtgaagtaattaagttagatgaagttcaataaataagggtataataatgg 26093379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 34031598 - 34031660
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||| |||| | | |||| |||||||||||||||||||||||||| |||||    
T  34031598 ttaattgtagttagtgtaatagtaaggttgaatgaaattcaataaataagagtataataatgg 34031660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37539178 - 37539120
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtat 59  Q
    ||||||||||||||||||| || || ||||||| |||||||||||||||||||| ||||    
T  37539178 cttgttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtat 37539120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 6160530 - 6160634
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||| ||||||| |||||||| ||| ||||||||||| ||| |||||| ||||            |||||||||||||||||||| ||||     
T  6160530 ttaattgtagttaatggaatagttaagttgaatgtaattcaataaacaagggtataataatg-----------cataaatgttgcattgatattctaaaa 6160618  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  6160619 tgacaattattttgag 6160634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 12151164 - 12151123
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttga 119  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  12151164 aataaatgctgcattgatattataaagtgacaattattttga 12151123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 917071 - 916967
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||| || || |||||||| |||||||| |||||||||| ||| || |||||        |||||||||| |||||||||||| |||||    
T  917071 ttaattgtagttagtagattagttaagttgcatgaaatttaataaataagggtaaaataatggaaa-----aaaataaatgctgcattgatattctaaag 916977  T
Q  105 tgacaattat 114  Q
    | ||||||||    
T  916976 taacaattat 916967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4441670 - 4441722
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||||||| ||||||| || ||||||||| |||||||||    
T  4441670 cttgttaattgtagttagtggagtaattaaattagatgaaatttaataaataa 4441722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 4659816 - 4659711
Alignment:
Q  12 tagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaat 111  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  ||||| | |||         |||| |||||||||||| |||| ||||||||||||    
T  4659816 tagttagtggagtaattaagttgaatgaaattcaataaataaggatataatagtggaaaaaat--aaat-aatgttgcattggtattgtaaagtgacaat 4659720  T
Q  112 tattttgag 120  Q
    |||||||||    
T  4659719 tattttgag 4659711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 6023720 - 6023776
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| |||| || |||||||||||||||||||||| || |||||||||    
T  6023720 ttaattgtagttattggagtagttaagttggatgaaattcaatacatgagagtataa 6023776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 8896403 - 8896451
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||    
T  8896403 ttaattgtagttagtggagtggttaagttggatgaaattcaataaataa 8896451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 10495809 - 10495773
Alignment:
Q  84 tgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||||||||||||||||||||||||    
T  10495809 tgttgcattgatattataaagtgacaattattttgag 10495773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 10495886 - 10495838
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||    
T  10495886 ttaattgtaattagtggagtagttaagttggatgaaattcaataaataa 10495838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 16395117 - 16395165
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||    
T  16395117 ttaattgtagttagtggagtagttaagttagatgaaattcaataaataa 16395165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 23169064 - 23169175
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| ||||||||  |||| ||||||  | ||||||||||||||||||||||||| | |||          |||||||||||||||| |||| |||||    
T  23169064 ttaattatagttagttaaatagttaagtgaggtgaaattcaataaataagagtataatagtggaaaagt----aataaatgttgcattggtattgtaaag 23169159  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  23169160 tgacaattattttgag 23169175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 27721579 - 27721523
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||| ||||| |||| |||||| ||||||||||||||| |||||||    
T  27721579 ttaattgtagttagtagaatagttaaattggataaaattcaataaataaaagtataa 27721523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 44761602 - 44761658
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||| |||||||||||||  |||||||| ||||||||||||||||||| ||||||    
T  44761602 ttaattatagttagtggaatggttaagttgaatgaaattcaataaataagggtataa 44761658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 3312095 - 3312056
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  3312095 aataaatgttgtattgatattataaagtgacaattatttt 3312056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 37275579 - 37275536
Alignment:
Q  76 aaaataaatgttgcattgatattataaagtgacaattattttga 119  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  37275579 aaaaaaaatgttgcattgatattctaaagtgacaattattttga 37275536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 5179470 - 5179528
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataaca 63  Q
    |||||||||||||||||| ||  ||| ||||||||||||||  ||||||||||||||||    
T  5179470 ttaattgtagttagtggagtagataaattggatgaaattcaggaaataagagtataaca 5179528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 28749038 - 28748926
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||| ||||| ||||  |||||||||||||||||  ||||||||| |||||| | |||       |||  |||||| ||||||| ||||||||||    
T  28749038 ttaattgtaattagtagaattgttaagttggatgaaattttataaataagggtataatagtgggaaaaaataa--taaatgctgcattgctattataaag 28748941  T
Q  105 tgacaattattttga 119  Q
    ||| |||||||||||    
T  28748940 tgataattattttga 28748926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 39887882 - 39887824
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataaca 63  Q
    ||||| ||||||||| || |||||||||| |||||||||||||||||||  ||||||||    
T  39887882 ttaatagtagttagttgagtaattaagtttgatgaaattcaataaataaatgtataaca 39887824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 41121965 - 41122007
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  41121965 aataaatgttgtattgatattttaaagtgacaattattttgag 41122007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 26256157 - 26256272
Alignment:
Q  3 tgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataa 102  Q
    ||||||||||||||| | || || ||||||||||||||| |||||||| |||| ||||| | |||       |  |||||||| | ||||| ||||||||    
T  26256157 tgttaattgtagttaatagagtagttaagttggatgaaagtcaataaagaagaatataatagtggaaagaatt--aataaatgatacattggtattataa 26256254  T
Q  103 agtgacaattattttgag 120  Q
    |||| |||||||||||||    
T  26256255 agtggcaattattttgag 26256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 30755012 - 30755073
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    |||||| ||||||||| |||| ||||||| |||||||||||||||||||  |||||| ||||    
T  30755012 ttaattatagttagtgaaatagttaagttagatgaaattcaataaataaaggtataataatg 30755073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 9412874 - 9412922
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  9412874 ttaattgtagttaatggaatagttgggttggatgaaattcaataaataa 9412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 14757665 - 14757721
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||| | || ||||||| ||||||||| |||||||||| ||||||    
T  14757665 ttaattgtagttagtgaagtagttaagttcgatgaaatttaataaataagggtataa 14757721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 15699114 - 15699074
Alignment:
Q  80 taaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  15699114 taaatgctgcattgatattctaaagtgacaattattttgag 15699074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 26252560 - 26252645
Alignment:
Q  35 gatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||||||| |||||  ||||        ||||||||||||||| |||| ||| |||| ||||||||||||||||    
T  26252560 gatgaaattcaataaataagggtatattaatgaaaaaaaataaaataaatgttgctttgaaattgtaaaatgacaattattttgag 26252645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 27897002 - 27896954
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||| ||||||||||| ||||| |||||||||||||| |||||||||    
T  27897002 ttaattatagttagtggagtaatttagttggatgaaatttaataaataa 27896954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 31042844 - 31042796
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||| ||||| | ||||||||||| ||||||||||||||||||    
T  31042844 ttaattgtaggtagtgaagtaattaagttgaatgaaattcaataaataa 31042796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 35682887 - 35682977
Alignment:
Q  27 ttaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||||||||||||||| |||||| | |||        | ||||||| ||||||||||||| |||| || |||||||||||||    
T  35682887 ttaagttggatgaaattcaataaataagggtataatagtggaaaaa---ataataaatattgcattgatattctaaattggcaattattttgag 35682977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44707831 - 44707879
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||| |  | |||||||||||||||||||||||||||    
T  44707831 ttaattgtagttagtgaagcagttaagttggatgaaattcaataaataa 44707879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 16395243 - 16395277
Alignment:
Q  134 ggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||||||||||||||| |||||||||||||||||    
T  16395243 ggtaaagagacaattattgtgagacggagggagta 16395277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 17988887 - 17988929
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||    
T  17988887 aataaatgttgcattaatattttaaaatgacaattattttgag 17988929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 21910150 - 21910192
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||    
T  21910150 aataaatgtggcattgatattttaaagtgacaattattctgag 21910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 31042773 - 31042731
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||| || ||||||||| |||||||||||||||||||||    
T  31042773 aataaatgatgtattgatattctaaagtgacaattattttgag 31042731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 3260638 - 3260589
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||||||||||    
T  3260638 ttaattgtagttagtggagaagttaagtttgatgaaattgaataaataag 3260589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 9379279 - 9379169
Alignment:
Q  5 ttaattgtagttagtggaa-taattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaa 103  Q
    ||||||||||||||||| | || ||||||| ||||||||| ||||||||   |||||| |||||         |||||||| ||||||||||||| ||||    
T  9379279 ttaattgtagttagtgggagtagttaagtttgatgaaatttaataaatataggtataataatggaaaaat---aaataaatattgcattgatattctaaa 9379183  T
Q  104 gtgacaattatttt 117  Q
     |||||||||||||    
T  9379182 atgacaattatttt 9379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 32970638 - 32970683
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaa 50  Q
    |||||||| ||||||  |||||||||||||||| ||||||||||||    
T  32970638 ttaattgttgttagtaaaataattaagttggataaaattcaataaa 32970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 45775442 - 45775487
Alignment:
Q  75 taaaataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||  |||||  ||||||||||||||||||||||||||    
T  45775442 taaaataaatggcgcattagtattataaagtgacaattattttgag 45775487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 120
Target Start/End: Complemental strand, 52837254 - 52837217
Alignment:
Q  83 atgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  52837254 atgttgcattgctattataaagtggcaattattttgag 52837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 2137440 - 2137488
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||| |||| |||| || ||||||||||| |||||||||||||||    
T  2137440 ttaattgttgttattggagtatttaagttggataaaattcaataaataa 2137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 9307544 - 9307512
Alignment:
Q  136 taaagagacaattatcgtgagacggagggagta 168  Q
    |||||||||||| ||||||||||||||||||||    
T  9307544 taaagagacaataatcgtgagacggagggagta 9307512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26258011 - 26258067
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||| || |||||| |||||||||||||||||||||  || |||||||| ||||||    
T  26258011 ttaatcgtggttagtagaataattaagttggatgaaaaccagtaaataagggtataa 26258067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 27687301 - 27687265
Alignment:
Q  80 taaatgttgcattgatattataaagtgacaattattt 116  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  27687301 taaatgttgtattgatattctaaagtgacaattattt 27687265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 29074857 - 29074817
Alignment:
Q  77 aaataaatgttgcattgatattataaagtgacaattatttt 117  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  29074857 aaataaatgttgtatttgtattataaagtgacaattatttt 29074817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 37177883 - 37177827
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||| |||||||||  | || ||||||||||| ||||| |||||||||||||||||    
T  37177883 ttaatggtagttagtatagtagttaagttggataaaattaaataaataagagtataa 37177827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 42410041 - 42409993
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||||| | ||| |||||| ||||||| ||||||||||||    
T  42410041 ttaattgtagttagttggatagttaagtaggatgaagttcaataaataa 42409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 5053222 - 5053334
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||| ||| || |||| |||||||| ||||||||||||||||||||| |||||        ||||||||||||||||||||||| |||||    
T  5053222 ttaattgtagttagcggagtagttaaattggatgagattcaataaataagagtataataatggggaaa---aaaataaatgttgcattgatattttaaag 5053318  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  5053319 tgacaattattttgag 5053334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 45425735 - 45425848
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| | |||        | |||||||||| |||||||||| |||||    
T  45425735 ttaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataatagtggaaaaaaa-ataataaatgttacattgatattgtaaag 45425833  T
Q  105 tgacaattattttga 119  Q
    |||||||||||||||    
T  45425834 tgacaattattttga 45425848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 22771904 - 22772017
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| ||||        |  |||||||||||||||| |||| |||||    
T  22771904 ttaattgtagttagtgaagtaattatgttggatgaaattcaataaataagggtataataatgaaaagtaat--aataaatgttgcattggtattctaaag 22772001  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  22772002 tgacaattattttgag 22772017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 29226597 - 29226708
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| ||| || ||||        || |||||||| |||||||||||| |||||    
T  29226597 ttaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtacaataatg---aaaaatataataaatgctgcattgatattttaaag 29226693  T
Q  105 tgacaattattttga 119  Q
    |||||||||||||||    
T  29226694 tgacaattattttga 29226708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 34948756 - 34948867
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||         | ||||||| |||||||| |||| |||||    
T  34948756 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataag-gtataacaatg---aaaaaaataataaatattgcattggtattctaaag 34948851  T
Q  105 tgacaattattttgag 120  Q
    | ||||||||||||||    
T  34948852 taacaattattttgag 34948867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 36006956 - 36007071
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||| |||| | ||         ||||||| |||||||||  |||| |||||    
T  36006956 ttaattgtagttagtggggtaattaagtttgatgaaattcaataaataagagcataatagtgaaaaaaataaaaataattgttgcattagtattctaaag 36007055  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  36007056 tgacaattattttgag 36007071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 10180016 - 10180126
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| |||||||||||| |||||| |||||| ||| |       |  |||||||||||||||| |||| |||||    
T  10180016 ttaattgtagttagtggagtagttaagttgaatgaaattcaattaataagtgtataataatagaaaataat--aataaatgttgcattggtattctaaag 10180113  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  10180114 tgacaattatttt 10180126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 17719327 - 17719436
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| ||||||||||| || ||||||||||||||||| |||||||||  |||||| |||||       |  |||||||||||||||| |||| |||||    
T  17719327 ttaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataataatggaaaaagat--aataaatgttgcattggtattctaaag 17719424  T
Q  105 tgacaattattt 116  Q
    ||||||||||||    
T  17719425 tgacaattattt 17719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 26626181 - 26626294
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |   |||| ||||||||||||||||||| |||||| |||||       |||  |||||| |||||||||||| |||||    
T  26626181 ttaattgtagttagtggagtagtccggttgaatgaaattcaataaataagggtataataatgggaaaaaataa--taaatgctgcattgatattttaaag 26626278  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  26626279 tgacaattattttgag 26626294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 4428420 - 4428531
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || ||||||| ||||||||||||||||||| ||||||| | |||        | ||||| |||| |||||||||| |||||    
T  4428420 ttaattgtagttagtgaattagttaagttagatgaaattcaataaataaaagtataatagtggaaaa----ataataattgttacattgatattctaaag 4428515  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  4428516 tgacaattattttgag 4428531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 5356647 - 5356597
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataaga 55  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  5356647 ttaattgtagttaatggaataattaagttggatgaaattcaataaaaaaga 5356597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 13335263 - 13335151
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||| ||||||| || || ||||||| ||||||||||||||||| || |||||| |||||        | |||||||||||||||| |||| |||||    
T  13335263 ttaattgcagttagtagagtagttaagtttgatgaaattcaataaatcagggtataataatggaaaaa---ataataaatgttgcattggtattctaaag 13335167  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  13335166 tgacaattattttgag 13335151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 40996434 - 40996594
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||| |  ||  ||||         ||||| |||||||||||| |||| |||||    
T  40996434 ttaattgtagttagtgaaatggttaagttggatgaaattcaataaataag-gggtactaatg-----aaaaaaaatgaatgttgcattggtattctaaag 40996527  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagtaata 171  Q
    ||||||||||||||||            ||||||||| |||||||| ||||||||||||||||||||    
T  40996528 tgacaattattttgagaaaaagaaaaaatggtaaagaaacaattattgtgagacggagggagtaata 40996594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 27294128 - 27294176
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  27294128 ttaattgcagttagtggagtaattaagttggatgaaattcaataaataa 27294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 31231777 - 31231667
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||| || ||||||||||||| |||| | |||||       |  |||||||| ||||||| |||||||||     
T  31231777 ttaattgtagttagtggagtagttaagttggataaagttcaataaataagggtattataatggaaaaaaat--aataaatgatgcattggtattataaaa 31231680  T
Q  105 tgacaattatttt 117  Q
    |||||||||||||    
T  31231679 tgacaattatttt 31231667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 32678450 - 32678394
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  32678450 ttaattgtagttagtggagtagttaagttggatgaaattaaataaataagaatataa 32678394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 42887047 - 42886991
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||||||||    
T  42887047 ttaattgtagttagtggcgtagttaagttggataaaattcaataaataagagtataa 42886991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 43719305 - 43719353
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  43719305 ttaattatagttagttgaataattaagttggatgaaattcaataaataa 43719353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 44761563 - 44761619
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| || ||||||    
T  44761563 ttaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataa 44761619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 9300182 - 9300297
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| ||||||||||| || |||||||| |||||||||||||||||||  ||||| | |||        | |||||||  ||||||| |||| |||||    
T  9300182 ttaattttagttagtggagtagttaagttgaatgaaattcaataaataaggatataatagtggggaaagaaataataaatactgcattggtattgtaaag 9300281  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  9300282 tgacaattattttgag 9300297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 17823968 - 17823856
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || ||||||||||||||||| ||||||||| ||||||| | |||        | ||||||| ||| |||| |||||||||     
T  17823968 ttaattgtagttagtgaagtagttaagttggatgaaattaaataaataatagtataatagtggaggaa---ataataaatattgtattgttattataaat 17823872  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  17823871 tgacaattattttgag 17823856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 39405801 - 39405697
Alignment:
Q  13 agttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaatt 112  Q
    |||||||||| ||||||||||| |||||||| |||||||||| |||||| | ||        |||  |||||| |||||||||||| |||||||||||||    
T  39405801 agttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataa--taaatgctgcattgatattctaaagtgacaatt 39405704  T
Q  113 attttga 119  Q
    |||||||    
T  39405703 attttga 39405697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 21216170 - 21216215
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaa 50  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  21216170 ttaattgtagttagtggagtagttaagttggatgaaattcaataaa 21216215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 32476334 - 32476273
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    ||||||||||||| || | || ||||||| |||||||||||||||||||| |||||||||||    
T  32476334 ttaattgtagttaatgaagtagttaagtttgatgaaattcaataaataagggtataacaatg 32476273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 10098060 - 10098108
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||    
T  10098060 ttaattgtagttagtggagtagttaagttggatgaagttcaataaataa 10098108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 31271068 - 31271013
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    |||||| ||||||||||| || ||||||||||| |||||||||||||||| |||||    
T  31271068 ttaattatagttagtggagtagttaagttggataaaattcaataaataagggtata 31271013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 34057684 - 34057731
Alignment:
Q  2 ttgttaattgtagttagtggaataattaagttggatgaaattcaataa 49  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||||    
T  34057684 ttgttatttgtagttagtgaaatagttaagttggatgaaattcaataa 34057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 39301025 - 39301138
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || || ||||| |||||||||||||||||| ||||||| |||||       |  |||||| | | |||||||||| ||||     
T  39301025 ttaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataataatggaaaataat--aataaacgattcattgatattctaaaa 39301122  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  39301123 tgacaattattttgag 39301138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 39482662 - 39482546
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaa-aataaatgttgcattgatattataaa 103  Q
    |||||| ||||||||||| || |||||| | ||||||||||||||||||| |||||| ||| |        || |||||||  ||||||| |||| ||||    
T  39482662 ttaattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataatagtgggaaaaaataataaatactgcattggtattgtaaa 39482563  T
Q  104 gtgacaattattttgag 120  Q
    |||||||||||||||||    
T  39482562 gtgacaattattttgag 39482546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 7172961 - 7172905
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| || | || |||||||| ||||||||||||||||||| ||||||    
T  7172961 ttaattgtagttaatgaagtagttaagttgaatgaaattcaataaataagggtataa 7172905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 11977005 - 11977053
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||||||| || || ||||||| |||||||||||||||||||    
T  11977005 ttaattgtagttagtagagtagttaagttagatgaaattcaataaataa 11977053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 21216239 - 21216279
Alignment:
Q  77 aaataaatgttgcattgatattataaagtgacaattatttt 117  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  21216239 aaataaatgttgcattggtattgtaaagtgacaattatttt 21216279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 31082666 - 31082618
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||| ||||||||||| || ||||||||||||||||| |||||||||    
T  31082666 ttaattatagttagtggagtagttaagttggatgaaatttaataaataa 31082618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 35504940 - 35504996
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| | ||||| |||| || ||| |||||||||||||||||||||||    
T  35504940 ttaattgtagttaatagaatagttaaattcgataaaattcaataaataagagtataa 35504996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 35732168 - 35732112
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||| |||||||| || | ||||| |||||||||||||| ||||||||||||    
T  35732168 ttaattgtaattagtggagtagtaaagttagatgaaattcaatatataagagtataa 35732112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 50792 - 50753
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  50792 aataaatgctgcattgatattctaaagtgacaattatttt 50753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 396751 - 396790
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  396751 aataaatgttgcattggtattctaaagtgacaattatttt 396790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 32678392 - 32678353
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatttt 117  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  32678392 aataaatgatgcattgatattttaaagtgacaattatttt 32678353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 10953872 - 10953914
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||| |||  |||||||||||||||||||||    
T  10953872 aataaatgttgcattggtatcgtaaagtgacaattattttgag 10953914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 10961877 - 10961919
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||| |||  |||||||||||||||||||||    
T  10961877 aataaatgttgcattggtatcgtaaagtgacaattattttgag 10961919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 1875879 - 1875916
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatt 115  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  1875879 aataaatgttgcattggtattgtaaagtgacaattatt 1875916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 13831713 - 13831754
Alignment:
Q  79 ataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    |||||||||||||||||||| |||||||||| || |||||||    
T  13831713 ataaatgttgcattgatattctaaagtgacagttcttttgag 13831754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 25285098 - 25285139
Alignment:
Q  79 ataaatgttgcattgatattataaagtgacaattattttgag 120  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||    
T  25285098 ataaatgttgcgttgttattatatagtgacaattattttgag 25285139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 34455815 - 34455852
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattatt 115  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  34455815 aataaatgttgcattgatattttaaattgacaattatt 34455852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 40028552 - 40028503
Alignment:
Q  12 tagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||| | |||||||||| |||||||||||||||| |||| |||||    
T  40028552 tagttagtgaagtaattaagttagatgaaattcaataaacaagaatataa 40028503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 31331455 - 31331419
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaa 41  Q
    |||||||||||||||| | ||||||||||||||||||    
T  31331455 ttaattgtagttagtgaagtaattaagttggatgaaa 31331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 19929993 - 19929882
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| |||||       |  |||||||||||||||| |||| |||||    
T  19929993 ttaattgtagttagtgaaatagttaagttggatgaaattcaataaataagggtataataatggaaaataat--aataaatgttgcattggtattctaaag 19929896  T
Q  105 tgacaattattttg 118  Q
    ||||||||||||||    
T  19929895 tgacaattattttg 19929882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 6315843 - 6315956
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||| |||||| |||||       |  |||||||||||||||| |||| |||||    
T  6315843 ttaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatggaaaataat--aataaatgttgcattggtattctaaag 6315940  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  6315941 tgacaattattttgag 6315956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 6754076 - 6753963
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||   ||||        |||| ||||||||||||| ||||||||||    
T  6754076 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtatattgatggaaaaaa--aaaaaaaatgttgcattggtattataaag 6753979  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  6753978 tgacaattattttgag 6753963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 21060677 - 21060569
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||  |||||| |||||       ||||||||||| |||||||||||| |||||    
T  21060677 ttaattgtagttagtggagtagttaagttggataaaattcaataaataatggtataataatgg---aaaataaaataaatgatgcattgatattctaaag 21060581  T
Q  105 tgacaattattt 116  Q
    ||||||||||||    
T  21060580 tgacaattattt 21060569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 40899965 - 40899804
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||| |||||||||||||||||||| |||||| |||||       |  |||||||| |||| || |||| |||||    
T  40899965 ttaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaataat--aataaatgctgcaatgttattctaaag 40899868  T
Q  105 tgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||||||||||||||            || ||||||||||||||| |||||||||||||||||    
T  40899867 tgacaattattttgagaaaaagaaaatttgataaagagacaattattgtgagacggagggagta 40899804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 6753724 - 6753836
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||||| |||||| |||||       |  |||||||||||||||| |||| |||||    
T  6753724 ttaattgtagttagtggagtagttaagttggatgaaatttaataaataagggtataataatggaaaaagat--aataaatgttgcattggtattctaaag 6753821  T
Q  105 tgacaattattttga 119  Q
    ||| |||||||||||    
T  6753822 tgataattattttga 6753836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 29570439 - 29570383
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  29570439 ttaattgtagttaatggaatagttaagttggatgaaattcaataaataagagtataa 29570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 4818598 - 4818484
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||||| |||||| | |||        | |||||||| | ||||| ||||||||||    
T  4818598 ttaattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataatagtgggaaaaaa-ataataaatgctacattggtattataaag 4818500  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  4818499 tgacaattattttgag 4818484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 27542842 - 27542780
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||    
T  27542842 ttaattgtagttagtggagtagttaagttggataaaattcaataaataagagtataataatgg 27542780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 1248670 - 1248783
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| | || |||||||| || ||||||||| |||||| |||||| ||||        |||  ||||||||||||||||||| |||||    
T  1248670 ttaattgtagttagtgaagtagttaagttgaataaaattcaattaataagggtataataatgaaaaataataa--taaatgttgcattgatattctaaag 1248767  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  1248768 tgacaattattttgag 1248783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 8698356 - 8698242
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||| |||||| | |||        | |||||||  | |||||||||| |||||    
T  8698356 ttaattgtagttagtggagtggttaagttggatgaaattcaataaataagggtataatagtggaaaaaaa-ataataaatactacattgatattgtaaag 8698258  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  8698257 tgacaattattttgag 8698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 2588197 - 2588290
Alignment:
Q  75 taaaataaatgttgcattgatattataaagtgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||             ||||||||||||||||| |||||||||||||||||    
T  2588197 taaaataaatgctgcattgatattctaaagtgacaattattttgagaaaaagaaaaataggtaaagagacaattattgtgagacggagggagta 2588290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 40530290 - 40530403
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| |  ||||||||||||||||| |||||||||| |||||| | |||        | |||||||| ||||||| |||| |||||    
T  40530290 ttaattgtagttagtggagtggttaagttggatgaaattaaataaataagggtataatagtgggaaataa-ataataaatgctgcattggtattgtaaag 40530388  T
Q  105 tgacaattattttga 119  Q
    |||||||||||||||    
T  40530389 tgacaattattttga 40530403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 9515777 - 9515668
Alignment:
Q  11 gtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaa-aataaatgttgcattgatattataaagtgaca 109  Q
    |||||||||||| || |||||||| |||||||||| ||||||||||||||| | |||       ||| |||||||| ||||||  |||| ||||||||||    
T  9515777 gtagttagtggagtagttaagttgaatgaaattcattaaataagagtataatagtggaaaataataataataaatgatgcattagtattgtaaagtgaca 9515678  T
Q  110 attattttga 119  Q
    ||||||||||    
T  9515677 attattttga 9515668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 31655100 - 31655044
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||    
T  31655100 ttaattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtataa 31655044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 42803686 - 42803742
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||    
T  42803686 ttaattgtagttaatggagtggttaagttggatgaaattcaataaataagagtataa 42803742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 41496127 - 41496014
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||| ||||||||||| ||||||||||  |||||| | |||       |  |||||||||||||||  |||| |||||    
T  41496127 ttaattgtagttagtggagtagttaaattggatgaaatgcaataaataaaggtataatagtggaaaagaat--aataaatgttgcattagtattgtaaag 41496030  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  41496029 tgacaattattttgag 41496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 41062226 - 41062338
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||||||| ||||||||||| |||||| | ||||||||||||| |||| | |||||        | |||||||||||||||| |||| |||||    
T  41062226 ttaattgtagttagtagaataattaagctggatggagttcaataaataagggtattataatggaaaaa---ataataaatgttgcattggtattctaaag 41062322  T
Q  105 tgacaattattttgag 120  Q
    | | ||||||||||||    
T  41062323 ttataattattttgag 41062338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 7827992 - 7828041
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  7827992 ttaattgtagttagtggagtagttaagttggatgaaatttaataaataag 7828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 8725075 - 8725136
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatg 66  Q
    |||||||||||||||||| || |||| ||| |||||||||||||||||| ||||||| ||||    
T  8725075 ttaattgtagttagtggagtagttaacttgaatgaaattcaataaataatagtataataatg 8725136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 4441068 - 4441020
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||    
T  4441068 ttaattgtagttagtggagtagttaaattggatgaaattcaataaataa 4441020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 18841526 - 18841478
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  18841526 ttaattgtagttagtgaaataattaaattgggtgaaattcaataaataa 18841478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 11796233 - 11796288
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtata 60  Q
    |||||||||||||||| | || ||||||| ||||||||| ||||||||||||||||    
T  11796233 ttaattgtagttagtgtagtagttaagttagatgaaatttaataaataagagtata 11796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 2232145 - 2232191
Alignment:
Q  15 ttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||| || |||||||||||||||||||||||||||| ||||||    
T  2232145 ttagtggagtagttaagttggatgaaattcaataaataagggtataa 2232191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 6615946 - 6616059
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| ||||||||||| |  |||||||||||||| ||||||||||||| |||||| | |||        | |||||||||||||| | |||| |||||    
T  6615946 ttaattttagttagtggagtggttaagttggatgaa-ttcaataaataagggtataatagtggaaaaaaa-ataataaatgttgcataggtattgtaaag 6616043  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  6616044 tgacaattattttgag 6616059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 29374169 - 29374128
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttga 119  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  29374169 aataaatgttgcattgatattgtaaagtgataattattttga 29374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 22848450 - 22848506
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||| |||| || |||  ||||||||||||||||||||||| ||||||    
T  22848450 ttaattgtagttaatggagtagttagattggatgaaattcaataaataagggtataa 22848506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 29374389 - 29374333
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||||||||||||| || |||| ||| || |||||||||||||||| ||||||    
T  29374389 ttaattgtagttagtggagtagttaaattgaataaaattcaataaataagggtataa 29374333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 30512757 - 30512801
Alignment:
Q  10 tgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||    
T  30512757 tgtagttagtgaaatagttaagttggatgaaatttaataaataag 30512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 30553097 - 30553141
Alignment:
Q  10 tgtagttagtggaataattaagttggatgaaattcaataaataag 54  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||    
T  30553097 tgtagttagtgaaatagttaagttggatgaaatttaataaataag 30553141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41478877 - 41478818
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||| ||||| |||| || ||||||| |||||||||||||||||||| ||||||    
T  41478877 cttgttaattgcagttaatgga-tagttaagttagatgaaattcaataaataagggtataa 41478818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41492352 - 41492293
Alignment:
Q  1 cttgttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    |||||||| |||||||| |||| || ||||||| |||||||||||||||||||| ||||||    
T  41492352 cttgttaaatgtagttaatgga-tagttaagttagatgaaattcaataaataagggtataa 41492293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 3348196 - 3348309
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||| ||||||| ||| | ||||||||||||||||| |||||||||||||  ||| | |||||       |  |||||||| ||||||| |||| ||||     
T  3348196 ttaaatgtagttggtgaagtaattaagttggatgaagttcaataaataaggatattataatggaaaaaaat--aataaatgctgcattggtattctaaaa 3348293  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  3348294 tgacaattattttgag 3348309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27580647 - 27580540
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| || |||||||| |||||||| | |||||||  |||||| |||||         ||| ||||||||||||| |  | |||||    
T  27580647 ttaattgtagttagtggagtagttaagttgaatgaaattaattaaataaatgtataataatggg--------aaaaaaatgttgcattggttatgtaaag 27580556  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  27580555 tgacaattattttgag 27580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 37101274 - 37101319
Alignment:
Q  8 attgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||||||||| || ||||||| || |||||||||||||||||||    
T  37101274 attgtagttagtagagtaattaaatttgatgaaattcaataaataa 37101319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 39325903 - 39325862
Alignment:
Q  12 tagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    ||||||||||| || ||||||||||| |||||||||||||||    
T  39325903 tagttagtggagtagttaagttggattaaattcaataaataa 39325862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 8049 - 8163
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| | |||||        | |||||||| ||||||| |||| |||||    
T  8049 ttaattgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatgggaaaaaa-ataataaatgctgcattggtattctaaag 8147  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  8148 tgacaattattttgag 8163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 34087 - 34199
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||  |||||| | |||        | |||||||| |||||||||||| |||||    
T  34087 ttaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtggaaaaa---ataataaatgatgcattgatattgtaaag 34183  T
Q  105 tgacaattattttgag 120  Q
    ||||||||||||||||    
T  34184 tgacaattattttgag 34199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 252873 - 252984
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    ||||||||||| | |||| || |||||||| |||||||||||||||||||||||||| ||||         | |||||||||||||||| ||||||||||    
T  252873 ttaattgtagt-attggagtagttaagttgaatgaaattcaataaataagagtataataatgaaaaaa---ataataaatgttgcattggtattataaag 252968  T
Q  105 tgacaattattttgag 120  Q
    |||||||| |||||||    
T  252969 tgacaatttttttgag 252984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 56708 - 56664
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataa 49  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  56708 ttaattgtagttagtggaataattaagttggaagaaattcaataa 56664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 2072 - 2010
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||||| ||||||  || |||||||||||||||||||| |||||| |||||    
T  2072 ttaattgtagttagtggattaattacattcgatgaaattcaataaataagggtataataatgg 2010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 1751 - 1689
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    ||||||||||| |||||| || ||||||||||| |||||||||||||||| |||||| |||||    
T  1751 ttaattgtagtcagtggagtagttaagttggattaaattcaataaataagggtataataatgg 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 1532 - 1442
Alignment:
Q  78 aataaatgttgcattgatattataaagtgacaattattttgagnnnnnnnnnnnntggtaaagagacaattatcgtgagacggagggagta 168  Q
    |||||||||||||| | |||| |||||||||||||||||| ||            |||||||||||||||||| |||||||||||||||||    
T  1532 aataaatgttgcatcggtattctaaagtgacaattattttaagaaaaagaaaaaatggtaaagagacaattattgtgagacggagggagta 1442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 50243 - 50139
Alignment:
Q  13 agttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaagtgacaatt 112  Q
    |||||||||| ||||||||||| |||||||| |||||||||| |||||| | ||        |||  |||||| |||||||||||| |||||||||||||    
T  50243 agttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataataa--taaatgctgcattgatattctaaagtgacaatt 50146  T
Q  113 attttga 119  Q
    |||||||    
T  50145 attttga 50139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 5437 - 5389
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataa 53  Q
    |||||| ||||||||||| || |||||||||||||||||||||||||||    
T  5437 ttaattttagttagtggagtagttaagttggatgaaattcaataaataa 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 17082 - 16973
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatggnnnnnnntaaaataaatgttgcattgatattataaag 104  Q
    |||||| |||||| |||  |||||| |||| |||||||||||||||||| | ||||| | |||        |||| ||||| ||||||||||||||||||    
T  17082 ttaattatagttaatggcgtaattacgttgaatgaaattcaataaataaaattataatagtggaa------aaaaaaaatgctgcattgatattataaag 16989  T
Q  105 tgacaattattttgag 120  Q
    ||| ||||||||||||    
T  16988 tgataattattttgag 16973  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 105731 - 105669
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataacaatgg 67  Q
    |||||||||||||||| | || |||||||| ||||||||| ||||||||| |||||| |||||    
T  105731 ttaattgtagttagtgaagtagttaagttgaatgaaattcgataaataagggtataataatgg 105669  T

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Target: scaffold1809 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 755 - 808
Alignment:
Q  8 attgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||||||||||| |  |||| ||||||||||||||||||||||| ||||||    
T  755 attgtagttagtggagtgtttaaattggatgaaattcaataaataagggtataa 808  T

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Target: scaffold0182 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 20421 - 20477
Alignment:
Q  5 ttaattgtagttagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||| |||||||| | || ||||||||||||||||||||||||| || ||||||    
T  20421 ttaattgcagttagtgaagtagttaagttggatgaaattcaataaatgagggtataa 20477  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 76328 - 76283
Alignment:
Q  16 tagtggaataattaagttggatgaaattcaataaataagagtataa 61  Q
    ||||||| || ||||||| |||||||||||||||||||| ||||||    
T  76328 tagtggagtagttaagttagatgaaattcaataaataagggtataa 76283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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