View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1563_low_23 (Length: 235)
Name: NF1563_low_23
Description: NF1563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1563_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 49082663 - 49082423
Alignment:
| Q |
1 |
tgaatcttgagaagacatcactgcaaattacatttacatacatgatgtaatgaggaaacatgaagaaggaagttatttaattagttcagacataacata- |
99 |
Q |
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| T |
49082663 |
tgaatcttgagaagacatcactgcaaattacatttacatacatgatgtaatgaggaaacatgaagaaggaagttatttaattagttcagacataacataa |
49082564 |
T |
|
| Q |
100 |
-------------------cttatgagaggaatgtttttgcaatagtgatggtccatgatttgggtaagtaatgaaaaaccagagattgatggtagatcg |
180 |
Q |
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| T |
49082563 |
cataacataacataacatacttatgagaggaatgtttttgcaattgtgatggtccatgatttgggtaagtaatgaaaaaccagagattgatgggagatcg |
49082464 |
T |
|
| Q |
181 |
acttctgttaatacgagatctatgtcaagtgatttattctt |
221 |
Q |
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| T |
49082463 |
acttctgttaatacgagatctatgtcaagtgatttattctt |
49082423 |
T |
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