View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15642_high_36 (Length: 273)

Name: NF15642_high_36
Description: NF15642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15642_high_36
NF15642_high_36
[»] chr3 (33 HSPs)
chr3 (18-193)||(8319002-8319174)
chr3 (67-156)||(821515-821601)
chr3 (51-169)||(3116407-3116522)
chr3 (67-182)||(21303329-21303441)
chr3 (39-129)||(10744885-10744976)
chr3 (51-129)||(10917913-10917992)
chr3 (194-241)||(18547418-18547465)
chr3 (194-241)||(20884968-20885015)
chr3 (51-137)||(21301913-21302000)
chr3 (67-137)||(19908319-19908389)
chr3 (51-182)||(21325335-21325464)
chr3 (67-137)||(22349421-22349491)
chr3 (86-157)||(17438431-17438499)
chr3 (89-137)||(12411185-12411233)
chr3 (40-181)||(12805866-12806005)
chr3 (69-137)||(16245746-16245814)
chr3 (194-241)||(25230099-25230146)
chr3 (194-241)||(25237686-25237733)
chr3 (194-241)||(37045280-37045327)
chr3 (67-129)||(6289915-6289977)
chr3 (137-193)||(2723799-2723855)
chr3 (55-134)||(932742-932821)
chr3 (194-241)||(4067212-4067258)
chr3 (194-241)||(25238978-25239025)
chr3 (194-241)||(25802399-25802446)
chr3 (72-127)||(28728961-28729016)
chr3 (55-137)||(4650231-4650313)
chr3 (89-127)||(8557156-8557194)
chr3 (75-129)||(8889177-8889231)
chr3 (89-127)||(13908253-13908291)
chr3 (71-113)||(18458465-18458507)
chr3 (71-127)||(12759403-12759459)
chr3 (92-136)||(21825887-21825931)
[»] chr6 (32 HSPs)
chr6 (71-193)||(28933624-28933743)
chr6 (41-193)||(21907417-21907567)
chr6 (71-172)||(22410311-22410410)
chr6 (51-172)||(23143717-23143838)
chr6 (40-137)||(9726006-9726104)
chr6 (67-182)||(12183306-12183418)
chr6 (67-169)||(21672423-21672522)
chr6 (41-193)||(11176935-11177085)
chr6 (67-137)||(23645784-23645854)
chr6 (71-193)||(4339751-4339870)
chr6 (67-169)||(21679839-21679938)
chr6 (67-138)||(9516797-9516868)
chr6 (67-138)||(23844481-23844552)
chr6 (67-135)||(17729164-17729232)
chr6 (193-241)||(21312219-21312267)
chr6 (40-193)||(22567824-22567975)
chr6 (194-241)||(33774868-33774915)
chr6 (41-137)||(19244570-19244667)
chr6 (41-137)||(25927320-25927417)
chr6 (193-241)||(21312486-21312534)
chr6 (75-119)||(24657490-24657534)
chr6 (67-127)||(28589457-28589517)
chr6 (67-134)||(20005899-20005966)
chr6 (194-241)||(21311763-21311810)
chr6 (194-241)||(31821643-31821690)
chr6 (207-241)||(2891158-2891192)
chr6 (67-137)||(17299848-17299918)
chr6 (67-137)||(27737706-27737776)
chr6 (196-241)||(3653146-3653191)
chr6 (192-241)||(20126031-20126080)
chr6 (153-193)||(19244668-19244708)
chr6 (67-119)||(34478537-34478588)
[»] chr2 (31 HSPs)
chr2 (43-193)||(20174599-20174747)
chr2 (71-193)||(32085479-32085598)
chr2 (67-157)||(17743476-17743563)
chr2 (55-157)||(25196010-25196109)
chr2 (41-169)||(13776324-13776449)
chr2 (51-137)||(29719248-29719335)
chr2 (55-129)||(25530445-25530521)
chr2 (193-241)||(15639982-15640030)
chr2 (75-157)||(25535294-25535373)
chr2 (67-157)||(27909119-27909206)
chr2 (67-157)||(45621881-45621968)
chr2 (194-241)||(1912772-1912819)
chr2 (194-241)||(25433907-25433954)
chr2 (194-235)||(1707295-1707336)
chr2 (92-137)||(26667355-26667400)
chr2 (51-137)||(15339233-15339320)
chr2 (194-241)||(16379185-16379232)
chr2 (41-156)||(5777202-5777314)
chr2 (67-125)||(25070140-25070197)
chr2 (61-119)||(29142967-29143025)
chr2 (71-129)||(31804925-31804983)
chr2 (41-126)||(45553115-45553201)
chr2 (67-136)||(17349369-17349437)
chr2 (67-162)||(19200130-19200221)
chr2 (89-172)||(25618590-25618670)
chr2 (51-127)||(25888247-25888324)
chr2 (51-157)||(12953294-12953398)
chr2 (196-236)||(15620155-15620195)
chr2 (75-157)||(24090926-24091005)
chr2 (67-111)||(28770486-28770530)
chr2 (89-129)||(30411712-30411752)
[»] chr4 (40 HSPs)
chr4 (41-193)||(19092280-19092430)
chr4 (41-193)||(14648880-14649029)
chr4 (71-182)||(11490548-11490656)
chr4 (51-138)||(13128890-13128978)
chr4 (32-157)||(13692669-13692792)
chr4 (67-157)||(13908866-13908953)
chr4 (51-182)||(12578241-12578370)
chr4 (51-182)||(17671997-17672126)
chr4 (67-127)||(11521218-11521278)
chr4 (67-127)||(22526376-22526436)
chr4 (194-241)||(7381515-7381562)
chr4 (67-137)||(19882652-19882722)
chr4 (89-192)||(19929640-19929740)
chr4 (67-193)||(5679217-5679340)
chr4 (67-169)||(11933431-11933529)
chr4 (194-241)||(1645594-1645641)
chr4 (194-241)||(23943087-23943134)
chr4 (67-137)||(15164779-15164849)
chr4 (67-137)||(17216829-17216899)
chr4 (67-137)||(19374830-19374899)
chr4 (67-137)||(20315012-20315082)
chr4 (67-137)||(21323892-21323962)
chr4 (101-193)||(22357496-22357585)
chr4 (200-241)||(4414238-4414279)
chr4 (89-138)||(16730415-16730464)
chr4 (92-162)||(19636581-19636648)
chr4 (67-193)||(22175927-22176049)
chr4 (89-137)||(24639471-24639519)
chr4 (194-241)||(14352043-14352090)
chr4 (67-138)||(15047140-15047211)
chr4 (67-138)||(15107213-15107284)
chr4 (194-241)||(44471170-44471217)
chr4 (67-137)||(7582309-7582379)
chr4 (71-137)||(13992893-13992959)
chr4 (67-137)||(19492717-19492787)
chr4 (89-172)||(17337120-17337200)
chr4 (67-119)||(12839815-12839867)
chr4 (67-119)||(17709769-17709821)
chr4 (146-182)||(17951271-17951307)
chr4 (146-182)||(17955123-17955159)
[»] chr8 (25 HSPs)
chr8 (40-193)||(19786715-19786866)
chr8 (93-193)||(13697893-13697990)
chr8 (40-182)||(34497099-34497239)
chr8 (67-193)||(14528161-14528284)
chr8 (51-138)||(24114298-24114386)
chr8 (51-137)||(29382378-29382465)
chr8 (71-138)||(2637614-2637681)
chr8 (67-137)||(17101910-17101980)
chr8 (92-137)||(24269634-24269679)
chr8 (194-241)||(2044306-2044353)
chr8 (146-193)||(25182392-25182439)
chr8 (194-241)||(27926146-27926193)
chr8 (67-129)||(17976631-17976693)
chr8 (67-129)||(24904645-24904707)
chr8 (67-137)||(25226148-25226218)
chr8 (39-127)||(5850924-5851013)
chr8 (41-193)||(30806456-30806611)
chr8 (89-136)||(27659479-27659526)
chr8 (40-126)||(28276786-28276872)
chr8 (67-113)||(24110696-24110742)
chr8 (67-113)||(30783782-30783828)
chr8 (72-137)||(13315009-13315074)
chr8 (41-129)||(15238784-15238873)
chr8 (192-241)||(22705430-22705479)
chr8 (92-129)||(44011049-44011086)
[»] chr7 (57 HSPs)
chr7 (51-192)||(10586989-10587128)
chr7 (41-193)||(7318258-7318408)
chr7 (67-193)||(8313356-8313482)
chr7 (51-129)||(21230307-21230386)
chr7 (40-192)||(3734580-3734730)
chr7 (67-174)||(8054469-8054576)
chr7 (51-137)||(23099969-23100056)
chr7 (89-193)||(4785870-4785971)
chr7 (89-193)||(4818870-4818971)
chr7 (89-193)||(17153118-17153219)
chr7 (51-169)||(12181603-12181720)
chr7 (71-157)||(17077144-17077227)
chr7 (41-193)||(9574392-9574542)
chr7 (194-241)||(29038871-29038918)
chr7 (41-169)||(1584530-1584654)
chr7 (39-137)||(11803062-11803162)
chr7 (40-137)||(14195990-14196087)
chr7 (67-136)||(13759878-13759947)
chr7 (89-156)||(18662475-18662539)
chr7 (81-137)||(7492280-7492336)
chr7 (67-127)||(18466017-18466077)
chr7 (67-156)||(10584487-10584573)
chr7 (194-241)||(31743740-31743787)
chr7 (194-241)||(42515340-42515387)
chr7 (67-137)||(2563830-2563899)
chr7 (71-137)||(5530037-5530103)
chr7 (67-129)||(11221189-11221251)
chr7 (55-136)||(13418533-13418615)
chr7 (71-137)||(18368997-18369063)
chr7 (67-137)||(31492942-31493012)
chr7 (72-137)||(3329675-3329740)
chr7 (92-137)||(5108602-5108647)
chr7 (196-241)||(26957545-26957590)
chr7 (89-137)||(9731644-9731692)
chr7 (67-127)||(10937614-10937674)
chr7 (67-172)||(16365717-16365820)
chr7 (71-127)||(21912507-21912563)
chr7 (194-241)||(2611510-2611557)
chr7 (194-241)||(6747457-6747504)
chr7 (194-241)||(6747927-6747974)
chr7 (51-129)||(9864351-9864430)
chr7 (51-182)||(6013588-6013717)
chr7 (67-137)||(6042473-6042542)
chr7 (67-137)||(8979023-8979093)
chr7 (91-137)||(17203059-17203105)
chr7 (87-158)||(1872817-1872885)
chr7 (67-174)||(3191042-3191146)
chr7 (92-125)||(9078203-9078236)
chr7 (51-119)||(15869590-15869659)
chr7 (146-187)||(15869683-15869724)
chr7 (92-137)||(16059038-16059083)
chr7 (67-120)||(18661602-18661655)
chr7 (89-137)||(1848244-1848292)
chr7 (67-111)||(2953585-2953628)
chr7 (67-127)||(8054085-8054145)
chr7 (71-127)||(12391201-12391257)
chr7 (67-127)||(16306706-16306766)
[»] scaffold0005 (1 HSPs)
scaffold0005 (41-193)||(168263-168412)
[»] scaffold0622 (1 HSPs)
scaffold0622 (43-193)||(715-864)
[»] chr1 (33 HSPs)
chr1 (67-194)||(22664218-22664342)
chr1 (67-176)||(33190689-33190795)
chr1 (67-137)||(18736257-18736327)
chr1 (67-157)||(17610256-17610343)
chr1 (67-157)||(21449101-21449188)
chr1 (51-193)||(9787843-9787983)
chr1 (41-137)||(21847619-21847715)
chr1 (67-157)||(15543966-15544053)
chr1 (67-176)||(16179019-16179128)
chr1 (51-186)||(23037984-23038115)
chr1 (69-174)||(25405610-25405715)
chr1 (67-138)||(26648987-26649057)
chr1 (194-241)||(39582589-39582636)
chr1 (67-137)||(3591670-3591740)
chr1 (67-137)||(12208613-12208683)
chr1 (69-119)||(24306340-24306390)
chr1 (71-137)||(29242535-29242601)
chr1 (194-240)||(35009859-35009905)
chr1 (67-182)||(24281289-24281401)
chr1 (137-182)||(28008184-28008229)
chr1 (40-169)||(15813143-15813269)
chr1 (67-164)||(15813517-15813612)
chr1 (89-137)||(21666625-21666673)
chr1 (89-136)||(14779599-14779646)
chr1 (67-126)||(16787754-16787813)
chr1 (71-137)||(13345353-13345419)
chr1 (69-181)||(24214558-24214667)
chr1 (92-137)||(9401542-9401587)
chr1 (92-129)||(16916958-16916995)
chr1 (51-126)||(12012828-12012904)
chr1 (38-113)||(16359853-16359928)
chr1 (40-127)||(27117745-27117833)
chr1 (89-137)||(51473893-51473941)
[»] chr5 (28 HSPs)
chr5 (67-134)||(15375902-15375969)
chr5 (40-176)||(18937732-18937865)
chr5 (40-187)||(18208219-18208363)
chr5 (51-172)||(25550487-25550608)
chr5 (55-137)||(20315447-20315529)
chr5 (67-193)||(19283819-19283942)
chr5 (55-137)||(24140442-24140524)
chr5 (89-138)||(24245560-24245609)
chr5 (40-193)||(24266918-24267069)
chr5 (40-193)||(24343549-24343700)
chr5 (67-127)||(17185475-17185535)
chr5 (194-241)||(39147180-39147227)
chr5 (67-129)||(17171578-17171640)
chr5 (67-137)||(22755533-22755603)
chr5 (67-157)||(19004226-19004313)
chr5 (89-129)||(25402362-25402402)
chr5 (67-138)||(17431895-17431966)
chr5 (92-157)||(20549704-20549766)
chr5 (67-156)||(24852173-24852259)
chr5 (41-119)||(26110497-26110575)
chr5 (41-119)||(26121359-26121437)
chr5 (194-241)||(29679959-29680005)
chr5 (55-134)||(34128636-34128715)
chr5 (89-157)||(23388838-23388903)
chr5 (75-112)||(20858705-20858742)
chr5 (193-241)||(1822154-1822202)
chr5 (95-139)||(36175173-36175217)
chr5 (57-137)||(39434464-39434544)
[»] scaffold0062 (1 HSPs)
scaffold0062 (74-193)||(43191-43307)
[»] scaffold0102 (1 HSPs)
scaffold0102 (67-137)||(35549-35619)
[»] scaffold0024 (1 HSPs)
scaffold0024 (72-193)||(39601-39720)
[»] scaffold0333 (2 HSPs)
scaffold0333 (194-241)||(5268-5315)
scaffold0333 (194-241)||(4808-4855)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-126)||(54872-54931)
[»] scaffold0650 (1 HSPs)
scaffold0650 (40-137)||(6271-6369)
[»] scaffold0838 (1 HSPs)
scaffold0838 (67-119)||(2382-2434)
[»] scaffold0832 (1 HSPs)
scaffold0832 (67-119)||(2413-2465)
[»] scaffold0012 (1 HSPs)
scaffold0012 (193-241)||(246637-246685)
[»] scaffold0155 (1 HSPs)
scaffold0155 (89-162)||(35990-36060)
[»] scaffold0016 (1 HSPs)
scaffold0016 (89-157)||(3565-3630)
[»] scaffold1869 (1 HSPs)
scaffold1869 (68-137)||(406-475)
[»] scaffold0672 (1 HSPs)
scaffold0672 (89-126)||(1768-1805)
[»] scaffold0056 (1 HSPs)
scaffold0056 (56-129)||(21277-21350)
[»] scaffold0638 (1 HSPs)
scaffold0638 (89-137)||(840-888)
[»] scaffold0427 (1 HSPs)
scaffold0427 (91-157)||(2818-2881)
[»] scaffold0019 (1 HSPs)
scaffold0019 (71-119)||(11256-11304)


Alignment Details
Target: chr3 (Bit Score: 134; Significance: 8e-70; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 8319002 - 8319174
Alignment:
Q  18 agggaggtgagagacatggtagttgatggtcatattaggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacaggga 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||| ||||||||||| ||| |||||||||||||    
T  8319002 agggaggtgagagacatggtagttgatggtcagattaggcaagtataccaatcgtttaccaagtaatgaagtgataagtagaatatagtatccacaggga 8319101  T
Q  118 ttatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8319102 ttatcgtttcgtaca---aacaattcatgttacttattttaagttgatgatataaaatacaagagataagagttag 8319174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 821601 - 821515
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattt 156  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||| ||||| |||||||||  |   |||||||||||||||||||||    
T  821601 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgta---aacaattcatgttacttattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 3116522 - 3116407
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| | ||||| ||| |||| || |||||||| |||||| ||||||||||||||| ||||||||| ||   ||||||||| ||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtcca---aacaattcacgtta 3116427  T
Q  150 cttattttaagttgatgata 169  Q
    ||||||||||||||| ||||    
T  3116426 cttattttaagttgacgata 3116407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 182
Target Start/End: Complemental strand, 21303441 - 21303329
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||  |||| | ||||| | ||   |||||||   |||||||||||||||||||      
T  21303441 aatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatcca---aacaatttccgttacttattttaagttgact 21303345  T
Q  167 atataaaatacaagag 182  Q
    |||||||||| |||||    
T  21303344 atataaaataaaagag 21303329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 10744885 - 10744976
Alignment:
Q  39 gttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||| ||| ||||||||||| || ||| ||||||| ||| |||| || |||||||||||||||||| |||| ||||||| |||||||||    
T  10744885 gttgatgatcaaattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgt 10744976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 10917913 - 10917992
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||||||| || ||| ||||||| |||||||| || ||||||||||||||||||||||||| ||||| | |||||||    
T  10917913 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgt 10917992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 18547418 - 18547465
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  18547418 tgtaacatcccaatcgactttaagcattgccgactgaccctacaaacc 18547465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 20884968 - 20885015
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  20884968 tgtaacatcccaaacgactttaagcattgcagactgaccctacaaacc 20885015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 21301913 - 21302000
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||||||||||||| ||||| || |||||| |||||||    
T  21301913 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaa 21302000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 19908319 - 19908389
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||| || |  ||||||||| |||||||    
T  19908319 aatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaa 19908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 21325335 - 21325464
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| | ||||| ||| |||| || ||||||||| |||||||||||||||   ||| ||||||||| ||   |||||||  |||||    
T  21325335 attaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtcca---aacaatttgtgtta 21325431  T
Q  150 cttattttaagttgatgatataaaatacaagag 182  Q
    ||||||||||||| | ||||||||||| |||||    
T  21325432 cttattttaagttaacgatataaaataaaagag 21325464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 22349421 - 22349491
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||   ||| ||||||||| |||||||    
T  22349421 aatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaa 22349491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 17438499 - 17438431
Alignment:
Q  86 aaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||| ||   ||||||||| ||||||||||||    
T  17438499 aaatgataagtagagtatcatatccacatggattgtcgtttcgtcca---aacaattcacgttacttatttt 17438431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 12411185 - 12411233
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  12411185 tgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaa 12411233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 181
Target Start/End: Complemental strand, 12806005 - 12805866
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||||||||| || ||| || |||| ||| |||| || |||||||||||||||| |||||||| ||||| ||||||| | ||   |||    
T  12806005 ttgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatcca---aac 12805909  T
Q  139 aattcatgttacttattttaagttgatgatataaaatacaaga 181  Q
    ||||   |||||||||||||||| || | ||||||||| ||||    
T  12805908 aatttgcgttacttattttaagtcgacgttataaaataaaaga 12805866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 16245814 - 16245746
Alignment:
Q  69 tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||| ||| |||| || |||||||||||||||| |||||||| |||||||| |||||| |||||||    
T  16245814 tcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaa 16245746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 25230099 - 25230146
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  25230099 tgtaacatctcaaacgactttaagcattgtcgactgaccctacaaacc 25230146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 25237686 - 25237733
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  25237686 tgtaacatctcaaacgactttaagcattgtcgactgaccctacaaacc 25237733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 37045327 - 37045280
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  37045327 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaacc 37045280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 6289915 - 6289977
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||||| ||| |||| || |||||||||||||||| |||||||| |||||||| ||||||    
T  6289915 aatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgt 6289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 2723855 - 2723799
Alignment:
Q  137 acaattcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
    ||||||||||||||||||||||  |||||||||||||||| | ||| |||| |||||    
T  2723855 acaattcatgttacttattttagtttgatgatataaaataaatgagttaagggttag 2723799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 932742 - 932821
Alignment:
Q  55 ggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaa 134  Q
    ||||||| || ||||||||||  || |||| || |||||| ||||||||||||||||||| |||| || |||||| ||||    
T  932742 ggcaagtgtatcaatcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaa 932821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 4067212 - 4067258
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||| | ||||||||||||||| |||||||||||||||||||    
T  4067212 tgtaacatcc-agacgactttaagcattgccgactgaccctacaaacc 4067258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 25238978 - 25239025
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||| || |||||||||||||||  ||||||||||||||||||    
T  25238978 tgtaacatctcatacgactttaagcattgtcgactgaccctacaaacc 25239025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 25802399 - 25802446
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||| ||||||||||||||||||   |||||||||||||||||    
T  25802399 tgtaacatctcaaacgactttaagcattgttgactgaccctacaaacc 25802446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 28728961 - 28729016
Alignment:
Q  72 tttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||| |||| || |||||||||||||||||||||||||  |||| |||||||    
T  28728961 tttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttc 28729016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 4650231 - 4650313
Alignment:
Q  55 ggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||| || ||||| |||| ||| |||| || |||| |||| ||||||||||||||||||||| || |||||  |||||||    
T  4650231 ggcaagtgtaccaatcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaa 4650313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 8557194 - 8557156
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  8557194 tgataagtagagtatcgtatccacatggattgtcgtttc 8557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 8889231 - 8889177
Alignment:
Q  75 atcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||| |||| || ||||||||||||||| ||||||||||||||| || ||||||    
T  8889231 atcaagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgt 8889177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 13908291 - 13908253
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  13908291 tgataagtagagtatcatatccatagggattatcgtttc 13908253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 18458507 - 18458465
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccaca 113  Q
    ||||||||| |||| || |||||||||||||||||||||||||    
T  18458507 gtttatcaagtaataaagtgataagtagagtatcgtatccaca 18458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 12759403 - 12759459
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    ||||| ||| |||| || ||||||||||||||||||||||||| | ||| |||||||    
T  12759403 gtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttc 12759459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 21825931 - 21825887
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaaca 136  Q
    |||||||||||||||||||||| ||||| | ||||||| ||||||    
T  21825931 taagtagagtatcgtatccacatggatttttgtttcgtccaaaca 21825887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 28933743 - 28933624
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatat 170  Q
    ||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||   |||||||  |||| |||||||||||||||||||||    
T  28933743 gtttagcaaataataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtcca---aacaatttgtgttgcttattttaagttgatgatat 28933647  T
Q  171 aaaatacaagagataagagttag 193  Q
    |||||| |||||||||| |||||    
T  28933646 aaaataaaagagataagggttag 28933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 21907417 - 21907567
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||  |||||||||||||| ||| ||||||| ||| |||| || ||||||||| ||||||||||||||| ||||| ||||||||| ||   || |    
T  21907417 tgatggtcggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtcca---aaaa 21907513  T
Q  140 attcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
    | ||  |||||||| |||||||||||||||||||||| |||||||||| |||||    
T  21907514 agtcgcgttacttaatttaagttgatgatataaaataaaagagataagggttag 21907567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 22410410 - 22410311
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttactta-ttttaagttgatgata 169  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||| | ||   ||||||||| |||||||| ||||||||||| ||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattca---aacaattcacgttacttatttttaagttgacgata 22410314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 172
Target Start/End: Original strand, 23143717 - 23143838
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| || |||| ||| |||| || |||||||||||||||| |||||||||||||| ||||||||| ||   ||||||||||||||    
T  23143717 attaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtcca---aacaattcatgtta 23143813  T
Q  150 cttattt--taagttgatgatataa 172  Q
    |||||||  |||||||| |||||||    
T  23143814 cttattttgtaagttgacgatataa 23143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 9726006 - 9726104
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||  ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  9726006 ttgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaa 9726104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 182
Target Start/End: Complemental strand, 12183418 - 12183306
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| ||| |||| || ||||||||| ||||||||||||||| ||||| || |||||| |    ||||||||| ||||||||||||||| ||| |    
T  12183418 aatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcc---taacaattcacgttacttattttaaggtgacg 12183322  T
Q  167 atataaaatacaagag 182  Q
    |||||||||| |||||    
T  12183321 atataaaataaaagag 12183306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 21672522 - 21672423
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||| |||||||| |||||| ||   |||||||| |||||||| |||| |||||| |    
T  21672522 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtcca---aacaattcgtgttacttttttttagttgacg 21672426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 11176935 - 11177085
Alignment:
Q  41 tgatggtcatattaggcaagtatagc-aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||  ||||||||||| || | ||||||||| | | || | || ||||||||||||||||||||||||| || || ||||||| |  ||| ||      
T  11176935 tgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataa-- 11177032  T
Q  140 attcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
     ||| ||||||||||||||| |||| ||||||||||| |||||||||| |||||    
T  11177033 -ttcgtgttacttattttaaattgacgatataaaataaaagagataagggttag 11177085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 23645854 - 23645784
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  23645854 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaa 23645784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 4339751 - 4339870
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatat 170  Q
    |||||||||||||| || ||||||||||||||| |||||||||  |||| |||||| || ||   | ||||||   ||||||||||||  |||| |||||    
T  4339751 gtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtcca---accaattcgcattacttattttagtttgacgatat 4339847  T
Q  171 aaaatacaagagataagagttag 193  Q
    |||||| |||||||||| |||||    
T  4339848 aaaataaaagagataagggttag 4339870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 21679938 - 21679839
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    |||||||||  || |||| || ||||||||||||||||||||||||| |||||||| |||||| ||   |||||||| |||||||| |||| |||||| |    
T  21679938 aatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtcca---aacaattcgtgttacttttttttagttgacg 21679842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 9516797 - 9516868
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||| | | |||| || ||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  9516797 aatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaac 9516868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 23844552 - 23844481
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||| | ||||||| ||||||||| ||||||||    
T  23844552 aatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaac 23844481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 17729164 - 17729232
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaac 135  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||  |||| ||||||||| |||||    
T  17729164 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaac 17729232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 21312267 - 21312219
Alignment:
Q  193 gtgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  21312267 gtgtaacatcccagacgactttaagcattgtcgactgaccctacaaacc 21312219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 22567824 - 22567975
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||||||||| || ||| | ||||| ||| |||| |  ||| ||||| ||||| ||||||||| ||||| | ||||||| ||||||||    
T  22567824 ttgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaac 22567923  T
Q  139 aattcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
       ||| ||||||||||||||||| | ||||||||||| ||| | |||| |||||    
T  22567924 ---tcacgttacttattttaagttaacgatataaaataaaagggttaagggttag 22567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 33774868 - 33774915
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||    
T  33774868 tgtaacatcccagacgactttaaacattgccgactgaccctacaaacc 33774915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 19244570 - 19244667
Alignment:
Q  41 tgatggtcatattaggcaagtatagca-atcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||||||||||| ||  | |||||||| ||| |||| || ||||||||||||||||| ||| | || |||| ||||||||| |||||||    
T  19244570 tgatggtcagattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 25927417 - 25927320
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaat-cgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||  ||||||||||| || |||  |||||| ||| |||| || ||||||||||| ||||||||||||| ||||| | ||||||| |||||||    
T  25927417 tgatggtcggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaa 25927320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 21312534 - 21312486
Alignment:
Q  193 gtgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||||    
T  21312534 gtgtaacatcccagacgactttaaccattgtcgactgaccctacaaacc 21312486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 24657534 - 24657490
Alignment:
Q  75 atcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  24657534 atcaagtaataaaatgataagtcgagtatcgtatccacagggatt 24657490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 28589517 - 28589457
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||||||||||||  || ||||||||| ||||||||| ||||| ||||| |||||||    
T  28589517 aatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttc 28589457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 20005966 - 20005899
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaa 134  Q
    ||||||||| ||| |||| || ||||||| ||||||||||||| ||| ||||| ||||||||| ||||    
T  20005966 aatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 21311810 - 21311763
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| |||||||||||||||  ||| ||||||||||||||    
T  21311810 tgtaacatcccagacgactttaagcattgtcgattgaccctacaaacc 21311763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 31821643 - 31821690
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  31821643 tgtaacatcccatatgactttaagcattgccgactgaccatacaaacc 31821690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 241
Target Start/End: Original strand, 2891158 - 2891192
Alignment:
Q  207 acgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||||| |||||||||||||||||||    
T  2891158 acgactttaagcattgccgactgaccctacaaacc 2891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 17299918 - 17299848
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || |||||||||||||||||||| ||  |||||| |||||| || |||||||    
T  17299918 aatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaa 17299848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 27737776 - 27737706
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || |||||||||||||||| || ||||| ||||| | ||||||| |||||||    
T  27737776 aatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaa 27737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 3653191 - 3653146
Alignment:
Q  196 taacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||| |||| |||||||||| |||| ||||||||||||||    
T  3653191 taacatcccagacgattttaagcattgccgattgaccctacaaacc 3653146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 20126031 - 20126080
Alignment:
Q  192 agtgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||| ||||| |||||||||||||||  |||| |||||||||||||    
T  20126031 agtgtaacgtcccagacgactttaagcattgtcgacggaccctacaaacc 20126080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 19244668 - 19244708
Alignment:
Q  153 attttaagttgatgatataaaatacaagagataagagttag 193  Q
    |||||||||||||||||||||||| ||||||| || |||||    
T  19244668 attttaagttgatgatataaaataaaagagatgagggttag 19244708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 34478537 - 34478588
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||||| |||||||| || || |||||||||||||||||||||| |||||    
T  34478537 aatcgtttaccaaataataaagtg-taagtagagtatcgtatccacaaggatt 34478588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 20174747 - 20174599
Alignment:
Q  43 atggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaat 141  Q
    ||||||| |||||| |||| || ||| ||||||| ||| |||| || |||||||||||||||| | |||||| ||||| ||||||||| |||||||   |    
T  20174747 atggtcagattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaa---t 20174651  T
Q  142 tcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
    ||||||||||||||||||||||||||||||||||| || || |||| |||||    
T  20174650 tcatgttacttattttaagttgatgatataaaataaaatagttaagggttag 20174599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 32085479 - 32085598
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatat 170  Q
    ||||| ||| |||| || |||||||||||||||| |||||||| ||||| |||||||||  ||||| |   || |||||||||||||||||||| |||||    
T  32085479 gtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagc---tcgtgttacttattttaagttgacgatat 32085575  T
Q  171 aaaatacaagagataagagttag 193  Q
    |||||| ||||| ||||||||||    
T  32085576 aaaataaaagagttaagagttag 32085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 17743563 - 17743476
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||| ||||||||||||||| ||   |||||||| |||||||||||||    
T  17743563 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtcca---aacaattcgtgttacttatttt 17743476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 25196010 - 25196109
Alignment:
Q  55 ggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttat 154  Q
    ||||||| || |||||||||| ||| |||| || |||||||||||||||| ||||||||||| || || |||||| ||   ||||||||| |||||||||    
T  25196010 ggcaagtgtaccaatcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtcca---aacaattcacgttacttat 25196106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 13776324 - 13776449
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||  ||||| ||||| |||||| |||||||| ||||||| || |||||||| ||||||||||||||||  |||| || |||||| ||||||||     
T  13776324 tgatggtcgaattagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaac- 13776421  T
Q  140 attcatgttacttattttaagttgatgata 169  Q
       || ||||||||||||||||||| ||||    
T  13776422 --ccacgttacttattttaagttgacgata 13776449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 29719335 - 29719248
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||| || ||| ||||||| ||| |||| || ||||||||||| ||||||||||||| ||||| ||||||||| |||||||    
T  29719335 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaa 29719248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 25530445 - 25530521
Alignment:
Q  55 ggcaagtatagcaatcgttt--atcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||| || |||||||||  ||||| |||| || ||||||||||||||||||||||||||||||| || ||||||    
T  25530445 ggcaagtgtaccaatcgttttcatcaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgt 25530521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 15640030 - 15639982
Alignment:
Q  193 gtgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  15640030 gtgtaacatcccagacgactttaagcattgccgactgaccctaccaacc 15639982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 25535294 - 25535373
Alignment:
Q  75 atcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||| |||| || ||||||||||||||||||||||||||||||| || |||||| |    |||||||| |||||||||||||    
T  25535294 atcaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtcc---gaacaattcttgttacttatttt 25535373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 27909206 - 27909119
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||| || |||| ||||| | ||   ||||||||| ||||||||||||    
T  27909206 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatcca---aacaattcacgttacttatttt 27909119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 45621968 - 45621881
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || ||| ||||||||||||||||| ||| ||||| ||||||||| ||   |||||||| |||||||||||||    
T  45621968 aatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtcca---aacaattcgtgttacttatttt 45621881  T

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Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 1912819 - 1912772
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  1912819 tgtaacatcccagacgactttaagcattgccgactgactctacaaacc 1912772  T

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Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 25433907 - 25433954
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||    
T  25433907 tgtaacatcccagatgactttaagcattgccgactgaccctacaaacc 25433954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 1707336 - 1707295
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgacccta 235  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  1707336 tgtaacatcccagacgactttaagcattgccgactgacccta 1707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 26667355 - 26667400
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||||||||||||||||||||| || |||||||| |||||    
T  26667355 taagtagagtatcgtatccacagggattttcctttcgtacgaacaa 26667400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 15339233 - 15339320
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||| || ||| || |||| ||| |||| || ||| |||||||||||| |||||||| ||||| ||||||||| |||||||    
T  15339233 attaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaa 15339320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 16379232 - 16379185
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||| |||||| ||||||||||||  ||||||||||||||||||    
T  16379232 tgtaacattccaaacaactttaagcattgtcgactgaccctacaaacc 16379185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 5777202 - 5777314
Alignment:
Q  41 tgatggtcatattaggcaagtatagca-atcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||| ||||||||||| || || ||||||||||||||||| |||   |||||| ||||||| ||| | | ||||| ||||||||| ||   ||||    
T  5777202 tgatggtcagattaggcaagtgtatcatatcgtttatcaaataat-aaagtttaagtaaagtatcgaatctatatggattgtcgtttcgtcca---aaca 5777297  T
Q  140 attcatgttacttattt 156  Q
    ||||| |||||||||||    
T  5777298 attcacgttacttattt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 25070140 - 25070197
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtt 125  Q
    |||||||||||||||||| || || |||||||||||||| ||||||| ||||| |||||    
T  25070140 aatcgtttatcaaataataaagtg-taagtagagtatcgcatccacaaggattgtcgtt 25070197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 29142967 - 29143025
Alignment:
Q  61 tatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    |||| |||||||| ||||| |||| ||| ||||||||||||| |||||||||| |||||    
T  29142967 tataccaatcgttaatcaagtaataaaacgataagtagagtaccgtatccacatggatt 29143025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 31804983 - 31804925
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||| |||||||| || ||||||||||||||| |||||||||| ||||  ||||||||    
T  31804983 gtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgt 31804925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 45553115 - 45553201
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgttt 126  Q
    ||||||| | ||||||||||| || ||| ||||||||||| |||| || ||||||||| | ||||||||  ||||||||| ||||||    
T  45553115 tgatggttagattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttt 45553201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 17349369 - 17349437
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaaca 136  Q
    ||||||||| ||| |||| || || ||||||||||||||||||||||  |||| ||||||||| ||||||    
T  17349369 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaaca 17349437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 19200221 - 19200130
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagtt 162  Q
    |||| |||| |||||||| |  |||||||| |||||||||||||||| ||||| ||||||| | ||||||||   |||  ||||||||||||||||    
T  19200221 aatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaac---tcacattacttattttaagtt 19200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 25618590 - 25618670
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataa 172  Q
    |||||||||||||||| |||||||| ||||| |||||||||  |   ||||||||  || ||||||||| |||||| |||||||    
T  25618590 tgataagtagagtatcatatccacatggattgtcgtttcgtcta---aacaattcgcgtaacttatttttagttgacgatataa 25618670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 25888324 - 25888247
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    ||||||||||| || ||| | ||||| ||| |||| || ||||||||| ||||||||||||||| ||||| |||||||    
T  25888324 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgtttc 25888247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 12953398 - 12953294
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| || |||||||| |||| || | ||||||||||||| || |||||| ||||| ||||||||| |||  ||||||||  ||||    
T  12953398 attaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgt-caa--aacaattcgcgtta 12953302  T
Q  150 cttatttt 157  Q
    ||||||||    
T  12953301 cttatttt 12953294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 15620195 - 15620155
Alignment:
Q  196 taacatcccaaacgactttaagcattaccgactgaccctac 236  Q
    ||||||| || ||||||||||||||| ||||||||||||||    
T  15620195 taacatctcagacgactttaagcatttccgactgaccctac 15620155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 24091005 - 24090926
Alignment:
Q  75 atcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||| |||| || |||||| |||| ||||||||||||| ||||| || |||||| ||   |||||||| |||||||||||||    
T  24091005 atcaagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtcca---aacaattcttgttacttatttt 24090926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 28770530 - 28770486
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatcca 111  Q
    |||| |||| |||||||| || |||||||||||||||||||||||    
T  28770530 aatcctttaccaaataataaagtgataagtagagtatcgtatcca 28770486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 30411712 - 30411752
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||||||||||||||||| ||||||||| || ||||||    
T  30411712 tgataagtagagtatcgtatcaacagggattgtcatttcgt 30411752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 19092280 - 19092430
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||| ||||||||||| || ||| | ||||||||| |||| || ||||||| ||||||||| || |||| ||||| ||||||||| ||||||||     
T  19092280 tgatggtcagattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaac- 19092378  T
Q  140 attcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
      ||| ||| ||||||||||||||| ||||| ||||| ||||||||||||||||    
T  19092379 --tcacgttgcttattttaagttgacgatattaaataaaagagataagagttag 19092430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 14648880 - 14649029
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||| ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||||||||||||| ||||| ||||||| |  ||| | |     
T  14648880 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagc- 14648977  T
Q  140 attcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
      || |||||||||||||||||||| ||||||||||| |||| ||||| |||||    
T  14648978 --tcgtgttacttattttaagttgacgatataaaataaaagacataagggttag 14649029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 11490548 - 11490656
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatat 170  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||| | ||||| | ||   ||||||||  |||||||||||||  |||| |||||    
T  11490548 gtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttcca---aacaattcgcgttacttattttagtttgacgatat 11490644  T
Q  171 aaaatacaagag 182  Q
    |||||| |||||    
T  11490645 aaaataaaagag 11490656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 13128978 - 13128890
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||||| || ||| ||||||| ||| |||| |||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaac 13128890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 13692792 - 13692669
Alignment:
Q  32 catggtagttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgta 130  Q
    |||||| | ||||||||| ||||||||||| || ||| ||||||| ||| |||| || |||||||||||||||| |||||||| ||||| ||||||||      
T  13692792 catggtggatgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgac 13692693  T
Q  131 caaacaacaattcatgttacttatttt 157  Q
    ||   |||||||| |||||||||||||    
T  13692692 ca---aacaattcgtgttacttatttt 13692669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 13908866 - 13908953
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||| ||||| ||||||||| ||   |||||||| |||||||||||||    
T  13908866 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtcca---aacaattcgtgttacttatttt 13908953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 12578370 - 12578241
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| || |||| |||||||| || |||||| |||||||||||||||||| ||||| |||||| || |||||||   ||   |||     
T  12578370 attaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaa---tttgcgttt 12578274  T
Q  150 cttattttaagttgatgatataaaatacaagag 182  Q
    ||||||||||||||| ||||||||||| |||||    
T  12578273 cttattttaagttgacgatataaaataaaagag 12578241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 17671997 - 17672126
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||| ||||||||| ||||| | |||||||  |||||||   ||  ||||    
T  17671997 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaac---tcgcgtta 17672093  T
Q  150 cttattttaagttgatgatataaaatacaagag 182  Q
    ||||||||||||| | ||||||||||| |||||    
T  17672094 cttattttaagttaacgatataaaataaaagag 17672126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 11521278 - 11521218
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||    
T  11521278 aatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtttc 11521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 22526376 - 22526436
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| | ||| |||||||    
T  22526376 aatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttc 22526436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 7381562 - 7381515
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  7381562 tgtaacatcccatacgactttaagcattgccgactgaccctacaaacc 7381515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 19882652 - 19882722
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||| |||| || |||| |||||||||||||||| ||| ||||| ||||||||| |||||||    
T  19882652 aatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaa 19882722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 19929740 - 19929640
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaaatacaagagataaga 188  Q
    |||||| |||||||||||||||||| ||||| |||||||||  ||| | |    | ||||||||||||||||||||  |||||||||| ||||||||||     
T  19929740 tgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcc---cgtgttacttattttaagttgacaatataaaataaaagagataagg 19929644  T
Q  189 gtta 192  Q
    ||||    
T  19929643 gtta 19929640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 5679217 - 5679340
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| ||| |||| || |||| |||||||||||||||| ||| | | | | ||||||| ||   ||||||||  ||||||||||||||||| | |    
T  5679217 aatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtcca---aacaattcgcgttacttattttaagttaacg 5679313  T
Q  167 atataaaatacaagagataagagttag 193  Q
    |||||||||| ||||| |||| |||||    
T  5679314 atataaaataaaagagttaagggttag 5679340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 11933431 - 11933529
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| ||| ||||||| |||||||| |||||||||  ||||| ||||| ||||||||| ||||||||   ||  |||||||||||||| ||||||    
T  11933431 aatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaac---tcgcgttacttattttaatttgatg 11933526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 1645594 - 1645641
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||    
T  1645594 tgtaacatcccatacgactttaagcattgccaactgaccctacaaacc 1645641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 23943087 - 23943134
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  23943087 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaacc 23943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 15164779 - 15164849
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || | ||||| ||||||||||||||||||||||| || |||||| |||||||    
T  15164779 aatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaa 15164849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 17216829 - 17216899
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| |||  ||| || |||||||||||||||| |||||||| ||||| ||||||||| |||||||    
T  17216829 aatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaa 17216899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 19374899 - 19374830
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||| | |||| |||||| || |||||||    
T  19374899 aatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttttgtccaaacaa 19374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 20315012 - 20315082
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || ||||||||||| |||| |||||||| ||||| ||||||||| |||||||    
T  20315012 aatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaa 20315082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 21323962 - 21323892
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| |||||||| |  |||| ||||||||||||||||||||  |||| ||||||||| |||||||    
T  21323962 aatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaa 21323892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 22357585 - 22357496
Alignment:
Q  101 tatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
    ||||||||||||| ||||| ||||||| |  |||||    ||| |||||||||||| ||||||| ||||||||| | ||||||||||||||||    
T  22357585 tatcgtatccacatggattgtcgtttcatttaaacag---ttcgtgttacttatttaaagttgacgatataaaaaataagagataagagttag 22357496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 4414238 - 4414279
Alignment:
Q  200 atcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  4414238 atcccatacgactttaagcattgccgactgaccctacaaacc 4414279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 16730464 - 16730415
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||||||||||||||||| | ||||| ||||||||| ||||||||    
T  16730464 tgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaac 16730415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 19636648 - 19636581
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagtt 162  Q
    |||||||||||| ||||| | ||||||| ||||||| | |||||||   ||||||||||||||||||||||    
T  19636648 taagtagagtattgtatctatagggattgtcgtttcatccaaacaa---ttcatgttacttattttaagtt 19636581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 22176049 - 22175927
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||||||| |||| || ||||||||||||||| ||||||| || |||| || |||  | ||   ||||||||  | || ||||||| ||||||||    
T  22176049 aatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctcca---aacaattcgcg-taattattttgagttgatg 22175954  T
Q  167 atataaaatacaagagataagagttag 193  Q
    |||||||||| ||||| |||| |||||    
T  22175953 atataaaataaaagagttaagggttag 22175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 24639519 - 24639471
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||||||||||||||| ||||| |||||| || |||||||    
T  24639519 tgataagtagagtatcgtatccacatggattttcgttttgtccaaacaa 24639471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 14352090 - 14352043
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| ||||||||||||||| | |||||||| ||||||||    
T  14352090 tgtaacatcccatacgactttaagcattgctgactgaccatacaaacc 14352043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 15047140 - 15047211
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||| ||| |||| || |||||||||||| |||||||| ||| ||||| |||||||||  |||||||    
T  15047140 aatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaac 15047211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 15107284 - 15107213
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||| ||| |||| || |||||||||||| |||||||| ||| ||||| |||||||||  |||||||    
T  15107284 aatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaac 15107213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 44471170 - 44471217
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||| |||||||||||||||| |||  ||||||||||||||||||    
T  44471170 tgtaacaccccaaacgactttaagaattgtcgactgaccctacaaacc 44471217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 7582309 - 7582379
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||| |||| ||| |||| || |||||||||||||||| |||||||| ||||| | ||||||| |||||||    
T  7582309 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaa 7582379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 13992959 - 13992893
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||| ||| |||| || || |||||||||||||||||||||| ||||| |||||| || |||||||    
T  13992959 gtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaa 13992893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 19492787 - 19492717
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| ||  |||||||||||||||||||||||| | ||| ||||||| | |||||||    
T  19492787 aatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaa 19492717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 17337200 - 17337120
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataa 172  Q
    ||||||||||||||||||||||| || |||| || |||||| |||||||   ||   |||||||||||| |||||| |||||||    
T  17337200 tgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaa---tttgcgttacttatttttagttgacgatataa 17337120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 12839867 - 12839815
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||| ||| ||| |||| |||||||| ||||||||||||||||||| |||||    
T  12839867 aatcgcttaccaattaataaaatgataggtagagtatcgtatccacaaggatt 12839815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 17709769 - 17709821
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||||| ||| |||| || ||||||||||||||| ||||||| |||||||    
T  17709769 aatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggatt 17709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 17951307 - 17951271
Alignment:
Q  146 gttacttattttaagttgatgatataaaatacaagag 182  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  17951307 gttacttattttaagttgacgatataaaataaaagag 17951271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 17955159 - 17955123
Alignment:
Q  146 gttacttattttaagttgatgatataaaatacaagag 182  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  17955159 gttacttattttaagttgacgatataaaataaaagag 17955123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 19786715 - 19786866
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||| |||||||| ||| ||||||| ||| |||| || ||| ||||| |||||| |||||| ||||| | ||||||||| ||||||||    
T  19786715 ttgatggtcggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaac 19786814  T
Q  139 aattcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
       || |||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  19786815 ---tcgtgttacttgttttaagttgatgatataaaataaaagagataaaagttag 19786866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 13697893 - 13697990
Alignment:
Q  93 aagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaaatacaagagataagagtta 192  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||  | |  ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  13697893 aagtagagtatcgtatccacaaggattttcgtttcgtccaaacaacc-tgc--gttacttattttaagttgacgatataaaatacaagagataagggtta 13697989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 34497099 - 34497239
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||| ||||||||||| || ||| ||||||| ||| |||| || |||| |||||||||||||||||| || || | ||||||||| ||   |||    
T  34497099 ttgatggtcagattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtcca---aac 34497195  T
Q  139 aattcatgttacttattttaagttgatgatataaaatacaagag 182  Q
    ||| || |||||||||||||| |||| ||||||||||| |||||    
T  34497196 aatccacgttacttattttaaattgacgatataaaataaaagag 34497239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 14528161 - 14528284
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| ||| |||| || ||||| |||||||||||||||||||  |||| ||||||||| ||||||||   ||| ||||||||||||||  ||| |    
T  14528161 aatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaac---tcacgttacttattttaaactgacg 14528257  T
Q  167 atataaaatacaagagataagagttag 193  Q
    |||||||||| || || |||| |||||    
T  14528258 atataaaataaaatagttaagggttag 14528284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 24114386 - 24114298
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||||| || ||| | ||||| ||| |||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  24114386 attaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaac 24114298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 29382465 - 29382378
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||||||||||||||||||| ||||||| | |||||||    
T  29382465 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaa 29382378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 2637614 - 2637681
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||| |||| || ||||||||||||||||||||||||| ||||| |||||||||  |||||||    
T  2637614 gtttatcaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaac 2637681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 17101980 - 17101910
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||| ||||||| ||||||| | |||||||    
T  17101980 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaa 17101910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 24269634 - 24269679
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  24269634 taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaa 24269679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 2044353 - 2044306
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||    
T  2044353 tgtaacatcccaaacgactttaagcattggtgactgaccctacaaacc 2044306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 25182439 - 25182392
Alignment:
Q  146 gttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  25182439 gttacttattttaagttgacgatataaaataaaagagataagggttag 25182392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 27926193 - 27926146
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  27926193 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaacc 27926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 17976631 - 17976693
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||| |||||||| |||| || |||||||||||||||||||||||||  |||| |||||||||    
T  17976631 aatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgt 17976693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 24904645 - 24904707
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||| |||| |||||||| || |||||||||||||||| ||||||||| |||| |||||||||    
T  24904645 aatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgt 24904707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 25226148 - 25226218
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||| |||| || |||||||| |||||||||||  ||||||||||| ||||| | |||||||    
T  25226148 aatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaa 25226218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 5850924 - 5851013
Alignment:
Q  39 gttgatggtcatattaggcaagtatagc-aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    ||||||||||  ||||| ||||| || | ||||||||| ||| |||| || |||||||||||||||||||||||||  |||| |||||||    
T  5850924 gttgatggtcggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttc 5851013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 30806611 - 30806456
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgta-----tccacagggattatcgtttcgtacaaa 134  Q
    ||||||||  ||||||||||| || ||| |||||||| || |||| || |||||||||||||||||||     |||||| ||||| ||||||| | ||      
T  30806611 tgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatcca-- 30806514  T
Q  135 caacaattcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
     |||||||   |||||||||||||  |||| ||||||||||| ||||| |||| |||||    
T  30806513 -aacaatttgcgttacttattttagtttgacgatataaaataaaagagttaagggttag 30806456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 27659479 - 27659526
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaaca 136  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| ||||||    
T  27659479 tgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaaca 27659526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 28276872 - 28276786
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgttt 126  Q
    |||||||||  ||||||||||| || ||| ||||||| |||||||  || |||||||| |||||||||||||| ||||||||| ||||    
T  28276872 ttgatggtcggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatccatagggattatagttt 28276786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 24110742 - 24110696
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccaca 113  Q
    |||| |||| ||| |||| ||||||||||||||||||||||||||||    
T  24110742 aatcatttaccaagtaataaaatgataagtagagtatcgtatccaca 24110696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 30783828 - 30783782
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccaca 113  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||    
T  30783828 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 30783782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 13315074 - 13315009
Alignment:
Q  72 tttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||| ||| |||| || ||||||||| ||||||||||||||| ||||| | ||||||| |||||||    
T  13315074 tttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaa 13315009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 15238784 - 15238873
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||||  ||||||||||| || ||| | ||||| ||| |||  |||||||||||||| ||||||||||||| | ||| |||||||||    
T  15238784 tgatggtcgaattaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgt 15238873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 22705479 - 22705430
Alignment:
Q  192 agtgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||| ||||||||||||||||||| |||| |||| ||| |||||    
T  22705479 agtgtaacattccaaacgactttaagcattgccgattgacactataaacc 22705430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 44011086 - 44011049
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  44011086 taagtagagtatcgtatccacatggattgtcgtttcgt 44011049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 10587128 - 10586989
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||||||||| ||||||||| |||||||||  |||||||   ||||||||    
T  10587128 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaac---tcatgtta 10587032  T
Q  150 cttattttaagttgatgatataaaatacaagagataagagtta 192  Q
    ||||||||||||| |  |||||||||| |||| ||||| ||||    
T  10587031 cttattttaagtttacaatataaaataaaagaaataagggtta 10586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 7318258 - 7318408
Alignment:
Q  41 tgatggtcatattaggcaagtatagca-atcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||  ||||||||||| || || |||||||| ||| |||| || ||||||||||||||||||||||||| ||||| |||||||||  ||||| |     
T  7318258 tgatggtcggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagc- 7318356  T
Q  140 attcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
      ||   |||||||||||||||||| ||||||||||| |||||||||| |||||    
T  7318357 --tcgcattacttattttaagttgacgatataaaataaaagagataagggttag 7318408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 8313482 - 8313356
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    |||| |||| ||| |||| || ||||||||||| ||||||||||||||||||| |||||||||  ||||||| | |  |||||||||||||||||||| |    
T  8313482 aatcatttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttattttaagttgaag 8313383  T
Q  167 atataaaatacaagagataagagttag 193  Q
     ||||||||| ||||| |||| |||||    
T  8313382 gtataaaataaaagagttaagggttag 8313356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 21230307 - 21230386
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  21230307 attaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttcgt 21230386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 3734580 - 3734730
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||| |||||| |||| || ||| |  |||| ||| |||| || ||||||||||||||||||||||||| | ||| | |||| || ||   |||    
T  3734580 ttgatggtcagattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtcca---aac 3734676  T
Q  139 aattcatgttacttattttaagttgatgatataaaatacaagagataagagtta 192  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| |||| ||||    
T  3734677 aattcacgttacttattttaagttgacgatataaaataaaagagttaagggtta 3734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 8054576 - 8054469
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattt---taagttg 163  Q
    ||||||||| |||||||| || |||||||||||||||||||| |||||| ||| ||||||||| ||   |||||||| ||||||||||||   |||||||    
T  8054576 aatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtcca---aacaattcttgttacttatttttgtaagttg 8054480  T
Q  164 atgatataaaa 174  Q
    | |||||||||    
T  8054479 acgatataaaa 8054469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 23100056 - 23099969
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||| || ||| ||||||| |||||||| || |||||||||||||||||||||||||  |||| ||||||||| |||||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaa 23099969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 4785870 - 4785971
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaaatacaagagataaga 188  Q
    ||||||||||||||||  ||||||||||||| ||||||||| ||   | || |||| |||||||||||| |||||| ||||||||||| ||||| ||||     
T  4785870 tgataagtagagtatcacatccacagggattgtcgtttcgtcca---agcacttcacgttacttatttttagttgacgatataaaataaaagagttaagg 4785966  T
Q  189 gttag 193  Q
    |||||    
T  4785967 gttag 4785971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 4818870 - 4818971
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaaatacaagagataaga 188  Q
    ||||||||||||||||  ||||||||||||| ||||||||| ||   | || |||| |||||||||||| |||||| ||||||||||| ||||| ||||     
T  4818870 tgataagtagagtatcacatccacagggattgtcgtttcgtcca---agcacttcacgttacttatttttagttgacgatataaaataaaagagttaagg 4818966  T
Q  189 gttag 193  Q
    |||||    
T  4818967 gttag 4818971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 17153219 - 17153118
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaaatacaagagataaga 188  Q
    |||||||||||||||||||||||||  |||| |||||||||  ||||| |   ||  ||||||||||||||||||| || |||||||| ||||||||||     
T  17153219 tgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagc---tcgcgttacttattttaagttgacgacataaaataaaagagataagg 17153123  T
Q  189 gttag 193  Q
    |||||    
T  17153122 gttag 17153118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 12181603 - 12181720
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    |||||||||||||| ||| |||||||| || |||| || ||| |||||||||| |||||||||| | ||| ||||||||| | ||  |||||||  ||||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaa--acaattcgagtta 12181700  T
Q  150 cttattttaagttgatgata 169  Q
    ||||||||||||||| ||||    
T  12181701 cttattttaagttgacgata 12181720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 17077144 - 17077227
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    |||||||||||||| || ||||| ||||||||| |||||||  |||||| ||||||||| ||   ||||||||||||||||||||||    
T  17077144 gtttatcaaataataaagtgataggtagagtattgtatccatggggattgtcgtttcgtcca---aacaattcatgttacttatttt 17077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 9574392 - 9574542
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||| ||||||||||| ||  || ||||||| |||  ||| || ||||||||||||||||||||| |||| |||| | |||||||  |||| ||     
T  9574392 tgatggtcagattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgac- 9574490  T
Q  140 attcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
      ||  |||| |||||||||||||| ||||||||||| ||||| |||| |||||    
T  9574491 --tcgcgttatttattttaagttgacgatataaaataaaagagttaagggttag 9574542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 29038871 - 29038918
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  29038871 tgtaacatcccagacgactttaagcattgccgactgaccctacaaacc 29038918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 1584530 - 1584654
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaa 140  Q
    ||||||||  ||||||||||| || ||||| |||| ||| |||| || |||||||| |||||||||||||||||||||| | |||||||  |   |||||    
T  1584530 tgatggtcggattaggcaagtgtaccaatcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtcta---aacaa 1584625  T
Q  141 ttcatgttacttattttaagttgatgata 169  Q
     ||  ||||||||||||||||||| ||||    
T  1584626 atcgcgttacttattttaagttgacgata 1584654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 11803062 - 11803162
Alignment:
Q  39 gttgatggtcatattag--gcaagtatagcaatcgtttatcaaa-taatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaac 135  Q
    ||||||||||| |||||  |||||| || ||||| |||| |||| |||| || ||||||||||||||||||||||||||||||| || |||||| |||||    
T  11803062 gttgatggtcaaattagtggcaagtgtaccaatc-tttaacaaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaac 11803160  T
Q  136 aa 137  Q
    ||    
T  11803161 aa 11803162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 14196087 - 14195990
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||| ||||||||||| || ||| |||||||||||||||| || || |||||| |||| |||||||||| | ||||| ||||||| |||||||    
T  14196087 ttgatggtcagattaggcaagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaa 14195990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 13759947 - 13759878
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaaca 136  Q
    ||||||||| ||| |||| || |||||||||||||||| |||||||| ||||| ||||||||| ||||||    
T  13759947 aatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaaca 13759878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 18662475 - 18662539
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattt 156  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||   ||||||||| |||||||||||    
T  18662475 tgataagtagagtatcgtatccacaaggattgtcgtttcgtcca---aacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 7492336 - 7492280
Alignment:
Q  81 taatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||| |||||||||||||||||||||||||||| ||||| | ||||||| |||||||    
T  7492336 taataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaa 7492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 18466017 - 18466077
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||| ||||||||||||| || |||||||||||||| |||||||| ||||||| |||||||    
T  18466017 aatcatttatcaaataataaagtgataagtagagtaacgtatccatagggattctcgtttc 18466077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 10584573 - 10584487
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattt 156  Q
    ||||||||||||| |||| || ||||||| | ||||||||||||||| ||||| ||||||| || |   |||||||| ||||||||||||    
T  10584573 aatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcataga---aacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 31743740 - 31743787
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  31743740 tgtaacatcccaaacgactttaagcattgtcgactaaccctacaaacc 31743787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 42515387 - 42515340
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||    
T  42515387 tgtaacatcacagacgactttaagcattgccgactgaccctacaaacc 42515340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 2563830 - 2563899
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || || |||||||||||||||||||||| ||||| ||||||||| |||||||    
T  2563830 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaa 2563899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 5530037 - 5530103
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||| ||| |||| |||||||||||| || ||||||||||||| |||| ||||||||| |||||||    
T  5530037 gtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaa 5530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 11221251 - 11221189
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||||||||  || |||| || ||||||||||||||| ||||||||||||||| |||||||||    
T  11221251 aatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgt 11221189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 13418533 - 13418615
Alignment:
Q  55 ggcaagtatagcaatcgtttatcaaataatgaaa-tgataagtagagtatcgtatccacagggattatcgtttcgtacaaaca 136  Q
    ||||||| || |||||||| | ||| |||| ||| ||||||||||||||||||||||| ||||||| || |||||| ||||||    
T  13418533 ggcaagtgtaccaatcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaaca 13418615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 18369063 - 18368997
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||| ||| |||| || ||||||||||||||| ||||||| ||||||| ||||||||| |||||||    
T  18369063 gtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaa 18368997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 31492942 - 31493012
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||  |||| || ||||||||||||||||||||||||| ||||| |||||| || |||||||    
T  31492942 aatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaa 31493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 3329740 - 3329675
Alignment:
Q  72 tttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||| ||| |||| || ||||||||||||||||||||||||| ||||| ||||||| | |||||||    
T  3329740 tttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaa 3329675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 5108602 - 5108647
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||    
T  5108602 taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaa 5108647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 26957545 - 26957590
Alignment:
Q  196 taacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||    
T  26957545 taacatcccagacgactttaagcattgccgactggccctacaaacc 26957590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 9731692 - 9731644
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| |||||||    
T  9731692 tgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaa 9731644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 10937614 - 10937674
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    ||||||||| ||| |||| || ||||||||| ||||||||||||||| ||||| |||||||    
T  10937614 aatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 10937674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 16365717 - 16365820
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttactta-ttttaagttgat 165  Q
    ||||||||| ||| |||| || | | ||||||||||||||||||||| ||||| |||||| || ||   ||||||||  |||||||| |||||||||||     
T  16365717 aatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgca---aacaattcgcgttacttatttttaagttgac 16365813  T
Q  166 gatataa 172  Q
    |||||||    
T  16365814 gatataa 16365820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 21912563 - 21912507
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||||||||| || |||||||| |||||||||||| || |||||| |||||||    
T  21912563 gtttatcaaataataaagtgataagttgagtatcgtatctacggggattgtcgtttc 21912507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 2611510 - 2611557
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  2611510 tgtaacattccatacgactttaagcattgtcgactgaccctacaaacc 2611557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 6747457 - 6747504
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  6747457 tgtaacatcccagactgctttaagcattgccgactgaccctacaaacc 6747504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 6747927 - 6747974
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||| || || ||||||||||||||| |||||||||||||||||||    
T  6747927 tgtaacctctcagacgactttaagcattgccgactgaccctacaaacc 6747974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 9864430 - 9864351
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||||||| || ||| | ||||| ||| |||| || |||||||||||||||| |||||||| ||||| |||||||||    
T  9864430 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgt 9864351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 6013588 - 6013717
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| || |||||||| || | || ||||||||||||||||||||||||| ||||| || |||  | ||   |||||||    |||    
T  6013588 attaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatcca---aacaattggcttta 6013684  T
Q  150 cttattttaagttgatgatataaaatacaagag 182  Q
    |||||||||  |||||||||||||||| |||||    
T  6013685 cttattttagtttgatgatataaaataaaagag 6013717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 6042473 - 6042542
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||  |||| ||||| ||||||||||||||||||||||| | || ||||||||| |||||||    
T  6042473 aatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaa 6042542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 8979093 - 8979023
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||| |||| ||| |||| || |||||||||||||||| |||||||| ||||| | ||||||| |||||||    
T  8979093 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaa 8979023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 17203059 - 17203105
Alignment:
Q  91 ataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||||||||||| ||| |||||| ||||||||| |||||||    
T  17203059 ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaa 17203105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 1872817 - 1872885
Alignment:
Q  87 aatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttta 158  Q
    |||||||||||||||||||||||||||    || ||||||| ||||   |||||||| ||||||||||||||    
T  1872817 aatgataagtagagtatcgtatccacataagttgtcgtttcataca---aacaattcgtgttacttatttta 1872885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 3191146 - 3191042
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||||  | |||| || ||| ||||| |||||  |||| | ||||||| ||||||||| |||||||   ||| ||||| |||||||||||||| |    
T  3191146 aatcgtttatttagtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaa---ttcgtgttatttattttaagttgagg 3191050  T
Q  167 atataaaa 174  Q
    ||||||||    
T  3191049 atataaaa 3191042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 9078203 - 9078236
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtt 125  Q
    |||||||| |||||||||||||||||||||||||    
T  9078203 taagtagattatcgtatccacagggattatcgtt 9078236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 15869590 - 15869659
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||||||| || ||| ||||||| ||| |||| || |||||||||||||||||||||| || |||||    
T  15869590 attaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatt 15869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 15869683 - 15869724
Alignment:
Q  146 gttacttattttaagttgatgatataaaatacaagagataag 187  Q
    ||||||||||||||||||| ||||||||||| || |||||||    
T  15869683 gttacttattttaagttgacgatataaaataaaatagataag 15869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 16059083 - 16059038
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||||||||||||||| ||||| || |||||| |||||||    
T  16059083 taagtagagtatcgtatccacatggattgtcctttcgtccaaacaa 16059038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 18661602 - 18661655
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatta 120  Q
    ||||||||| |||| ||| || ||||||||||||||| ||||||||| ||||||    
T  18661602 aatcgtttaccaaacaataaagtgataagtagagtattgtatccacaaggatta 18661655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 1848292 - 1848244
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| |||||||||||||| |||||| || |||||| |||||||    
T  1848292 tgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaa 1848244  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 2953585 - 2953628
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatcca 111  Q
    |||||||||||||||||| || || ||||||||||||||||||||    
T  2953585 aatcgtttatcaaataataaagtg-taagtagagtatcgtatcca 2953628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 8054145 - 8054085
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    ||||||||| ||| |||| || |||||| |||||||||||||||||| | ||| |||||||    
T  8054145 aatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtttc 8054085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 12391201 - 12391257
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||||||||| || ||||||| ||||| |||||| |||||| ||| |||||||    
T  12391201 gtttatcaaataataaagtgataagaagagtgtcgtattcacaggaattgtcgtttc 12391257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 16306706 - 16306766
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||| |||| ||| |||| || ||||||||||||||||||||| ||| |||||||| ||||    
T  16306706 aatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttc 16306766  T

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Target: scaffold0005 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 168412 - 168263
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||| ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||||||||||||| ||||| ||||||| |  ||| | |     
T  168412 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagc- 168315  T
Q  140 attcatgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
      || |||||||||||||||||||| ||||||||||| |||| ||||| |||||    
T  168314 --tcgtgttacttattttaagttgacgatataaaataaaagacataagggttag 168263  T

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Target: scaffold0622 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 193
Target Start/End: Original strand, 715 - 864
Alignment:
Q  43 atggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaat 141  Q
    ||||||| ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||| ||||| ||| ||||| ||||||||| ||   ||||||    
T  715 atggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtcca---aacaat 811  T
Q  142 tc-atgttacttattttaagttgatgatataaaatacaagagataagagttag 193  Q
     | | ||||||||||||||||||| ||||||||||| ||||| |||| |||||    
T  812 ccgacgttacttattttaagttgaagatataaaataaaagagttaagggttag 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 22664218 - 22664342
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| ||| |||| || |||||||||||||||| ||||||| |||||| || ||||||  |||||||   ||  ||| ||||||||||||||| |    
T  22664218 aatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaac---tcgcgttgcttattttaagttgacg 22664314  T
Q  167 atataaaatacaagagataagagttagt 194  Q
    |||||||||| |||||||||| ||||||    
T  22664315 atataaaataaaagagataagggttagt 22664342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 33190689 - 33190795
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||||||| |||| ||||||||||||||||||  ||||||||   ||| ||||||| |  |||||||   || |||||||||||||||||||| |    
T  33190689 aatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaac---tcgtgttacttattttaagttgacg 33190785  T
Q  167 atataaaata 176  Q
    ||||||||||    
T  33190786 atataaaata 33190795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 18736327 - 18736257
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || |||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  18736327 aatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaa 18736257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 17610343 - 17610256
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || | ||||||||||||||||||||||| ||||| ||||||||| ||   ||||||||| ||||||||||||    
T  17610343 aatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtcca---aacaattcacgttacttatttt 17610256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 21449101 - 21449188
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||| ||||| ||||||||  ||   ||||||| ||||||||||||||    
T  21449101 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggcca---aacaatttatgttacttatttt 21449188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 9787983 - 9787843
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| || |||| ||| |||| || ||||||||||||||||||||||| |   ||| |||||||||  |||||||   ||   |||    
T  9787983 attaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaac---tccaatta 9787887  T
Q  150 cttattttaagttgatgatataaaatacaagagataagagttag 193  Q
    ||||||||||||| ||||||||||||| |||||| ||| |||||    
T  9787886 cttattttaagtttatgatataaaatagaagagaaaagggttag 9787843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 21847619 - 21847715
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||||||||||| || ||| ||||||| ||| |||| || |  |||||||||||| ||||||||| ||||| ||||||||| |||||||    
T  21847619 tgatggtcatattaggcaagtgtaccaaatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaa 21847715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 15544053 - 15543966
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||| |  ||| ||||||||| ||   |||||||| |||||||||||||    
T  15544053 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtcca---aacaattcgtgttacttatttt 15543966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 16179019 - 16179128
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattt---taagttg 163  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||| | |||   ||||||||| ||   |||||||| ||||||||||||   |||||||    
T  16179019 aatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtcca---aacaattcttgttacttatttttgtaagttg 16179115  T
Q  164 atgatataaaata 176  Q
    | |||||||||||    
T  16179116 acgatataaaata 16179128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 23038115 - 23037984
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| ||||||| ||| |||| || |||||||| |||||||||||||||| ||||| |||||||||  |||||||   ||  ||||    
T  23038115 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaac---tctcgtta 23038020  T
Q  150 cttattttaag-ttgatgatataaaatacaagagataa 186  Q
    ||||||||||| ||||||  |||||||| |||||||||    
T  23038019 cttattttaagtttgatg--ataaaataaaagagataa 23037984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 25405715 - 25405610
Alignment:
Q  69 tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattt---taagttgat 165  Q
    ||||||| ||| |||| || ||||||||| ||||||||||||||| ||||| ||||||||| ||   |||| |||| |||||||||||   ||||||||     
T  25405715 tcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtcca---aacagttcacgttacttatttttgtaagttgac 25405619  T
Q  166 gatataaaa 174  Q
    |||||||||    
T  25405618 gatataaaa 25405610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 26649057 - 26648987
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||| ||| |||| ||||||||||| || ||| ||||||||| ||||||||||||||| ||||||||    
T  26649057 aatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaaacaac 26648987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 39582636 - 39582589
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  39582636 tgtaacatcccaaactactttaagcattgccgactgatcctacaaacc 39582589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 3591740 - 3591670
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||| |||| || |||||| ||||||||||||||||||  |||| |||||| || |||||||    
T  3591740 aatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaa 3591670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 12208613 - 12208683
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||| || ||||||||||| |||| |||||||| ||||| ||||||||| |||||||    
T  12208613 aatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaa 12208683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 24306390 - 24306340
Alignment:
Q  69 tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||| ||| |||| || |||||||||||||||||||||||||||||||    
T  24306390 tcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggatt 24306340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 29242535 - 29242601
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| |||| || ||||||||||||||||||||||| || |||| ||||||| | |||||||    
T  29242535 gtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaa 29242601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 35009859 - 35009905
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaac 240  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||||    
T  35009859 tgtaacatcccagacgactttgagcattgccgactgaccctacaaac 35009905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 24281289 - 24281401
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| ||| |||| || ||||||||||| |||| |||||||| ||||||||||||  | |    |||||||   |||||||||||||||||||      
T  24281289 aatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttcc---gaacaatttgcgttacttattttaagttgaca 24281385  T
Q  167 atataaaatacaagag 182  Q
    |||||||||| |||||    
T  24281386 atataaaataaaagag 24281401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 28008184 - 28008229
Alignment:
Q  137 acaattcatgttacttattttaagttgatgatataaaatacaagag 182  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||    
T  28008184 acaattcgtgttacttattttaagttgacgatataaaataaaagag 28008229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 15813269 - 15813143
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||||||||| || ||| ||||||||||  |||| || |||||||| || ||||||||||||| ||||| ||||| ||| ||||||||    
T  15813269 ttgatggtcggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaac 15813171  T
Q  139 aattcatgttacttattttaagttgatgata 169  Q
       ||  |||||||||||||| |||| ||||    
T  15813170 ---tctcgttacttattttaatttgacgata 15813143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 15813612 - 15813517
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataa-gtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttga 164  Q
    |||||||||||||| ||| || |||||| ||||||||| ||||||||| ||||| ||||||| |  |   |||||||| ||||||||||||| ||||||    
T  15813612 aatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttga---aacaattcgtgttacttatttttagttga 15813517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 21666673 - 21666625
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||||    
T  21666673 tgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaa 21666625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 14779599 - 14779646
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaaca 136  Q
    |||||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  14779599 tgataattagagtatcatatccacagggattgtcgtttcgtccaaaca 14779646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 16787813 - 16787754
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgttt 126  Q
    ||||||||||||| |||| || |||||||||||||||||||| ||||  |||| ||||||    
T  16787813 aatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttt 16787754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 13345419 - 13345353
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||| ||| |||| || |||||||||||||||| |||||||| ||||| |||||| || |||||||    
T  13345419 gtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaa 13345353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 24214558 - 24214667
Alignment:
Q  69 tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgat 168  Q
    ||||||| ||| |||| || ||||||||| ||||  ||||||||| ||||| | |||||||  |||||||   | | |||||||||||||||| || |||    
T  24214558 tcgtttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaac---ttacgttacttattttaagtggacgat 24214654  T
Q  169 ataaaatacaaga 181  Q
    |||||||| ||||    
T  24214655 ataaaataaaaga 24214667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 9401542 - 9401587
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||||||||||||||| | ||| ||||||||| |||||||    
T  9401542 taagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaa 9401587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 16916995 - 16916958
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||||||||||||||||||||||||||| || ||||||    
T  16916995 taagtagagtatcgtatccacagggattgtcctttcgt 16916958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 12012904 - 12012828
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgttt 126  Q
    ||||||||||| || ||| ||||||||||| || | || ||||||||||||||| ||||||||| | ||| ||||||    
T  12012904 attaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttt 12012828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 16359853 - 16359928
Alignment:
Q  38 agttgatggtcatattaggcaagtatagc-aatcgtttatcaaataatgaaatgataagtagagtatcgtatccaca 113  Q
    |||||||||||| ||||||||||| || | ||||||||| ||| |||| ||||| |||||| ||||| |||||||||    
T  16359853 agttgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagtatagtattgtatccaca 16359928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 27117833 - 27117745
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||||||||  ||||||||||| || ||| ||||||| ||| |||| || ||||||||||||||| |||| |||| | ||| |||||||    
T  27117833 ttgatggtcggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttc 27117745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 51473941 - 51473893
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||||||||||||| | ||||| |||||| || |||||||    
T  51473941 tgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaa 51473893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 15375969 - 15375902
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaa 134  Q
    ||||||||| |||||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  15375969 aatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaa 15375902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 18937732 - 18937865
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||||||||| || ||| |||||||| || |||| || ||||||||| |||||||||| || ||||||| | ||||||| |||||||     
T  18937732 ttgatggtcggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaa- 18937829  T
Q  139 aattcatgttacttattttaagttgatgatataaaata 176  Q
      |||| ||||||||||||||||| |||||||||||||    
T  18937830 --ttcacgttacttattttaagttaatgatataaaata 18937865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 187
Target Start/End: Complemental strand, 18208363 - 18208219
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||||||||| || ||| |||||||  || |||| || || |||||||||||||||||||||| ||||| || |||||| |||||||     
T  18208363 ttgatggtcggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaa- 18208266  T
Q  139 aattcatgttacttattttaagttgatgatataaaatacaagagataag 187  Q
      |||||||||||||||||   |||||||||||||||| ||||| ||||    
T  18208265 --ttcatgttacttattttgttttgatgatataaaataaaagagttaag 18208219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 25550608 - 25550487
Alignment:
Q  51 attaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgtta 149  Q
    ||||||||||| || ||| ||||||| ||| |||| || |||||||||||||||| |||||||||||||| || |||||| ||   |||||||| |||||    
T  25550608 attaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtcca---aacaattcttgtta 25550512  T
Q  150 cttattt--taagttgatgatataa 172  Q
    |||||||  |||||||| |||||||    
T  25550511 cttattttgtaagttgacgatataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 20315529 - 20315447
Alignment:
Q  55 ggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||| || |||||||||| ||| |||| |  ||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  20315529 ggcaagtgtaccaatcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaa 20315447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 19283942 - 19283819
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatg 166  Q
    ||||||||| |||||||| || ||||||||||||||| ||||||||| | |||| |||||||| ||   |||||||    | |||||||||||||||| |    
T  19283942 aatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtcca---aacaatttgcttaacttattttaagttgacg 19283846  T
Q  167 atataaaatacaagagataagagttag 193  Q
    ||||||| || ||||| |||| |||||    
T  19283845 atataaagtaaaagagttaagggttag 19283819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 24140442 - 24140524
Alignment:
Q  55 ggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||| || |||||||||| ||| |||| || ||||||||||||||| |||||||| |||||| || |||||| |||||||    
T  24140442 ggcaagtgtaccaatcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaa 24140524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 24245609 - 24245560
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  24245609 tgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaac 24245560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 24267069 - 24266918
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||||||||| || ||| ||||||| ||| |||| || || |||||||||||||||||||||| |||||||| ||| || ||   |||    
T  24267069 ttgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtcca---aac 24266974  T
Q  139 aattcatgttacttattttaagttgatgatataa-aatacaagagataagagttag 193  Q
    ||||| |||||||||||||   |||| ||||||| |||| ||||| |||| |||||    
T  24266973 aattcgtgttacttattttgttttgacgatataataataaaagagttaagggttag 24266918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 24343700 - 24343549
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    |||||||||  ||||||||||| || ||| ||||||| ||| |||| || || |||||||||||||||||||||| |||||||| ||| || ||   |||    
T  24343700 ttgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtcca---aac 24343605  T
Q  139 aattcatgttacttattttaagttgatgatataa-aatacaagagataagagttag 193  Q
    ||||| |||||||||||||   |||| ||||||| |||| ||||| |||| |||||    
T  24343604 aattcgtgttacttattttgttttgacgatataataataaaagagttaagggttag 24343549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 17185475 - 17185535
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttc 127  Q
    |||| |||| |||||||| || ||||||||||||||||||||| ||||||||| |||||||    
T  17185475 aatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttc 17185535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 39147227 - 39147180
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  39147227 tgtaacatcccagacgactttaagcattgccgattgaccctacaaacc 39147180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 17171640 - 17171578
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||| |||||||| |||| || |||||||||||| |||||||||||| ||||| |||||||||    
T  17171640 aatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgt 17171578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 22755533 - 22755603
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||| ||| |||||||  |||||||||||||||||||||| | ||||| ||||||| | |||||||    
T  22755533 aatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaa 22755603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 19004313 - 19004226
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||| ||| |||| || |||||||| |||||||||||||||| ||||| || ||| || ||   ||||||||| ||||||||||||    
T  19004313 aatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtcca---aacaattcacgttacttatttt 19004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 25402402 - 25402362
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  25402402 tgataagtagagtattgtatccacagggattgtcgtttcgt 25402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 17431895 - 17431966
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaac 138  Q
    ||||||||| ||| |||| || ||  |||||||||||||||||||||| |||| ||||||| | ||||||||    
T  17431895 aatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaac 17431966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 20549766 - 20549704
Alignment:
Q  92 taagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    |||||||||||||||||||||||||||| || |||||| |    |||||||| |||||||||||||    
T  20549766 taagtagagtatcgtatccacagggattgtcctttcgtcc---gaacaattcttgttacttatttt 20549704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 24852259 - 24852173
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattt 156  Q
    ||||| ||| ||| |||| |||||||||||| ||||||||||||||| ||||| | |||||||  |   ||||||||| |||||||||||    
T  24852259 aatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtcta---aacaattcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 26110575 - 26110497
Alignment:
Q  41 tgatggtcatattaggcaagtatagc-aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||||  ||||||||||| || | ||||||||||||| |||| ||||| ||||||||||||  ||||||||||||||    
T  26110575 tgatggtcggattaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagggatt 26110497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 26121437 - 26121359
Alignment:
Q  41 tgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||||  ||||||||||| || ||| ||||||| ||| |||| ||||| |||||||||||| |||||||||||||||    
T  26121437 tgatggtcggattaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagggatt 26121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 29679959 - 29680005
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||| | ||||||||||||||| |||||||||||||||||||    
T  29679959 tgtaacatcc-agacgactttaagcattgccgactgaccctacaaacc 29680005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 34128636 - 34128715
Alignment:
Q  55 ggcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaa 134  Q
    ||||||| || |||||||| | ||| |||| || ||||||||||| ||||||||||||||| ||| || |||||| ||||    
T  34128636 ggcaagtgtaccaatcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaa 34128715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 23388903 - 23388838
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||||||||||||||||||| ||||| || |||||| |    |||||||| |||||||||||||    
T  23388903 tgataagtagagtatcgtatccacatggattgtcctttcgtcc---gaacaattcttgttacttatttt 23388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 20858705 - 20858742
Alignment:
Q  75 atcaaataatgaaatgataagtagagtatcgtatccac 112  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  20858705 atcaagtaataaaatgataagtagagtatcgtatccac 20858742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 1822202 - 1822154
Alignment:
Q  193 gtgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||| |||||||||||||||   ||| |||||||||||||    
T  1822202 gtgtaacatcccagacgactttaagcattgttgaccgaccctacaaacc 1822154  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 36175173 - 36175217
Alignment:
Q  95 gtagagtatcgtatccacagggattatcgtttcgtacaaacaaca 139  Q
    ||||||||||||||||| | ||||| ||||||||| |||||||||    
T  36175173 gtagagtatcgtatccataaggattgtcgtttcgtccaaacaaca 36175217  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 39434464 - 39434544
Alignment:
Q  57 caagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||| || |||||||||| ||| |||| || |||||||||||  |||||||||||| ||||| || ||| || |||||||    
T  39434464 caagtgtaccaatcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaa 39434544  T

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Target: scaffold0062 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 43307 - 43191
Alignment:
Q  74 tatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatataaa 173  Q
    |||||| |||| || ||||||||| |||| |||||||||| ||||| |||||||||  ||||| |   || ||||||||||||||| |||| ||||||||    
T  43307 tatcaagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagc---tcgtgttacttattttaaattgacgatataaa 43211  T
Q  174 atacaagagataagagttag 193  Q
    ||| |||||||||| |||||    
T  43210 ataaaagagataagggttag 43191  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 35549 - 35619
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||||||| |||| || |||||| |||||||| ||||||||| ||||| ||||||||| |||||||    
T  35549 aatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaa 35619  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 39601 - 39720
Alignment:
Q  72 tttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagttgatgatata 171  Q
    |||| ||| |||| || |||||||||||| ||||||||||||  |||| | |||| || |||| ||  | |||  |||||||||||||||||| ||||||    
T  39601 tttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaa--actcactttacttattttaagttgacgatata 39698  T
Q  172 aaatacaagagataagagttag 193  Q
    ||||| ||||||||||| ||||    
T  39699 aaataaaagagataagaattag 39720  T

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Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 5315 - 5268
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  5315 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaacc 5268  T

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Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 4855 - 4808
Alignment:
Q  194 tgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||  ||||||||||||||  ||||||||||||||||||    
T  4855 tgtaacatcccagtcgactttaagcattgtcgactgaccctacaaacc 4808  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 54872 - 54931
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgttt 126  Q
    ||||||||| ||| |||| || ||||||||||||||| ||||||||||||||| ||||||    
T  54872 aatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttt 54931  T

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Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 6271 - 6369
Alignment:
Q  40 ttgatggtcatattaggcaagtatagcaa-tcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||| |||||||||||||||| || ||| |||||||  || |||| || | ||||||| ||||||||||||||| ||||| | ||||||| |||||||    
T  6271 ttgatagtcatattaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaa 6369  T

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Target: scaffold0838 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 2382 - 2434
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||||| |||||||| ||  |||||||||||||||||||||||| |||||    
T  2382 aatcgtttaccaaataataaagggataagtagagtatcgtatccacatggatt 2434  T

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Target: scaffold0832 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 2413 - 2465
Alignment:
Q  67 aatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    ||||||||| |||||||| ||  |||||||||||||||||||||||| |||||    
T  2413 aatcgtttaccaaataataaagggataagtagagtatcgtatccacatggatt 2465  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 246637 - 246685
Alignment:
Q  193 gtgtaacatcccaaacgactttaagcattaccgactgaccctacaaacc 241  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||||||||    
T  246637 gtgtaacatcccagacgactttaagcattgccgacagacactacaaacc 246685  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 36060 - 35990
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttattttaagtt 162  Q
    ||||||||||||||||||||||||| | ||| ||||||| | ||   || ||||| ||||||||||||||||||    
T  36060 tgataagtagagtatcgtatccacatgaattgtcgtttcatcca---aataattcgtgttacttattttaagtt 35990  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 3565 - 3630
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    ||||||||||||||||||||||||| ||||| || |||||| |    |||||||| |||||||||||||    
T  3565 tgataagtagagtatcgtatccacatggattgtcctttcgtcc---gaacaattcttgttacttatttt 3630  T

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Target: scaffold1869 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 475 - 406
Alignment:
Q  68 atcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    ||||||||  || |||| || ||||| ||||||||||||||| ||||||||| || |||||| |||||||    
T  475 atcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaa 406  T

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Target: scaffold0672 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 1768 - 1805
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgttt 126  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  1768 tgataagtagagtatcgtatccacaggaattgtcgttt 1805  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 21277 - 21350
Alignment:
Q  56 gcaagtatagcaatcgtttatcaaataatgaaatgataagtagagtatcgtatccacagggattatcgtttcgt 129  Q
    |||||| || |||||||| |  || |||| || |||||||||||||||| |||||||||||||| || ||||||    
T  21277 gcaagtgtaccaatcgttaacaaagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgt 21350  T

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Target: scaffold0638 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 888 - 840
Alignment:
Q  89 tgataagtagagtatcgtatccacagggattatcgtttcgtacaaacaa 137  Q
    |||||||||||||||||||||||  | |||| ||||||||| |||||||    
T  888 tgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaa 840  T

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Target: scaffold0427 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 2881 - 2818
Alignment:
Q  91 ataagtagagtatcgtatccacagggattatcgtttcgtacaaacaacaattcatgttacttatttt 157  Q
    |||||| |||||||||||||||| | ||| ||||||||| ||   |||||||| |||||||||||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtcca---aacaattcgtgttacttatttt 2818  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 11256 - 11304
Alignment:
Q  71 gtttatcaaataatgaaatgataagtagagtatcgtatccacagggatt 119  Q
    |||||||||||||| || |||||||||||||||| |||| ||| |||||    
T  11256 gtttatcaaataataaagtgataagtagagtatcatatctacatggatt 11304  T

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