View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15643_high_4 (Length: 240)
Name: NF15643_high_4
Description: NF15643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15643_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 802893 - 803107
Alignment:
| Q |
16 |
gtttcaactgagggagtttggtaccataccaatgttttttgtgggatttttgcaaaccatattcctggtagaaaaagaccattgggaagagggtaggaat |
115 |
Q |
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| T |
802893 |
gtttcaactgagggagtttggtaccatacaaatgttttttgtgggatttttgcaaaccatattcctggtagaaaaagaccattgggaagagggtag-aat |
802991 |
T |
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| Q |
116 |
ccgaattcgaaatcgccagaaggtgatttccaagttgaaattgatccagcagtgatgcttgattttaagtctatggcataaaagacatttagtgatgaaa |
215 |
Q |
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| T |
802992 |
ccgaattcgaaatagccagaaggtgatttccaagttgaatttgaaccagcagtgatgcttgattttaagtctatggcatataagacatttagtgatgaaa |
803091 |
T |
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| Q |
216 |
ttagtacaagaataat |
231 |
Q |
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|||||||||||||||| |
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| T |
803092 |
ttagtacaagaataat |
803107 |
T |
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