View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15644_low_11 (Length: 460)
Name: NF15644_low_11
Description: NF15644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15644_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 9 - 443
Target Start/End: Complemental strand, 3490730 - 3490296
Alignment:
| Q |
9 |
gataattcttaacacgtgacgcagttttcaggctcttgtggatattaatacctgcaactcttcttcgagaagatttcgatgacaaggaagcccttggtga |
108 |
Q |
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| T |
3490730 |
gataattcttaacacgtgacgcagttttcaggctcttgtggatattaatacctgcaactcttcttcgagaagattttgatgacaaggaagcccttggtga |
3490631 |
T |
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| Q |
109 |
atctgctttggaggaatctagattcaatgaagtcacattcttttcagaaaacttcgatgaagtttgcgtcttcttagaagtggaatttgatgaagttttg |
208 |
Q |
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| T |
3490630 |
atctgctttggaggaatctagattcaatgaagtcacattcttttcagaaaacttcgatgaaatttgcgtcttcttagaagtggaatttgatgaagttttg |
3490531 |
T |
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| Q |
209 |
gccaattgaaaagttgatactggatgagttttcacccttcgagaggttgatttcaatagaagttcctctttcttgaaatttgatattaatgaagctccaa |
308 |
Q |
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| T |
3490530 |
gccaattgaaaagttgatactggatgagttttcacccttcgagaggttgatttcaatagaagttcctctttcttgaaatttgatattgatgaagctccaa |
3490431 |
T |
|
| Q |
309 |
ccctcttggaaattggtttcggtgtagtgtccaccttagaacttgatgaaatttctggcttccttgttttataggtagagcaattctgcgaccttggaag |
408 |
Q |
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| T |
3490430 |
ccctcttggaaattggtttcggtgtagtgtccaccttagaacttgatgaaatttctggcttccttgttttataggtagagcaattctgcgaccttggaag |
3490331 |
T |
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| Q |
409 |
gaggggcaatcgcttcacaccggccagtgatgttt |
443 |
Q |
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| T |
3490330 |
gaggggcaatcgcttcacaccggccagtgatgttt |
3490296 |
T |
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