View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15644_low_29 (Length: 254)
Name: NF15644_low_29
Description: NF15644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15644_low_29 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 45467140 - 45467371
Alignment:
| Q |
1 |
ttgattttttggttgatattgttccgagagatgagattaaagatgaaggtgctgctgctattgttggtgctgctgctagtggtgttccttattattatcc |
100 |
Q |
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| T |
45467140 |
ttgattttttggttgatattgttccgagagatgagattaaagatgaaggtgctgctgctattgttggtgctgctgctagtggtgttccttattattatcc |
45467239 |
T |
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| Q |
101 |
tcctatgggacaacctgctggaatgatgattggtcgtccggctgttgatccggctaccggtgtttatgttcagccgccttctcaggcttggcagtctgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45467240 |
tcctatgggacaacctgctggaatgatgattggtcgtccggctgttgatcccgctaccggtgtttatgttcagccgccttctcaggcttggcagtctgtt |
45467339 |
T |
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| Q |
201 |
tggcagacgggcgcggatgatggttcttatgc |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
45467340 |
tggcagacgggcgcggatgatggttcttatgc |
45467371 |
T |
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