View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15647_low_13 (Length: 239)
Name: NF15647_low_13
Description: NF15647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15647_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 7998951 - 7998746
Alignment:
| Q |
15 |
aatatcaccattttgcattctgatttgataattaaacttcgttgaatttttacaggggataaatgggtccatctatttcaaaaggggagggagccgatga |
114 |
Q |
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| T |
7998951 |
aatatcaccattttgcattctgatttgataattaaactttgttgaatttttacaggggataaatgggtcgatctatttcaaaaggggagggagccgatga |
7998852 |
T |
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| Q |
115 |
caattacaatcaaatgtttcatgaacttatgcagagaatttatgcagatgtaagtcttgtattgtcgtgcaagaaactcacttttattaaacttgcacac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7998851 |
caattacaatcaaatgtttcatgaacttatgcagagaatttatgcagatgtaagtcttgtattgtcgtgcaagaaactcacttttattaaacttgcacac |
7998752 |
T |
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| Q |
215 |
gctcac |
220 |
Q |
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|||||| |
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| T |
7998751 |
gctcac |
7998746 |
T |
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