View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15648_high_3 (Length: 405)
Name: NF15648_high_3
Description: NF15648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15648_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 60 - 390
Target Start/End: Original strand, 7209551 - 7209881
Alignment:
| Q |
60 |
aataatttgataatgatttagtaattaaatctgtgtatggatttttggtgtgacagaatggagatatgagaatgcaataactgatggaaattcaaatgaa |
159 |
Q |
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| T |
7209551 |
aataatttgataatgatttagtaattaaatttgtgtatggatttttggtgtgacagaatggagatatgagaatgcaataactgatggaaattcaaatgaa |
7209650 |
T |
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| Q |
160 |
gaaggaccaaaacttgaagattttttgggatgttactcaaaccaaaaccagaatagtactactactagtactatgtctaaaattaatgttaatgtgtcac |
259 |
Q |
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| T |
7209651 |
gaaggaccaaaacttgaagattttttgggatgttactcaaaccaaaaccagaatagtactactactagtactatgtctaaaattaatgttaatgtgtcac |
7209750 |
T |
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| Q |
260 |
caagtttttgtaccaataataatccagagattgacacaaggaagaatctaacaaaccaatctttgattcactcttttcatgcatataatgatcacagcaa |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7209751 |
caagtttttgtaccaataataatccagagattgacacaagggagaatctaacaaaccaatctttgattcactcttttcatgcatataatgatcacagcaa |
7209850 |
T |
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| Q |
360 |
caacaatcatcatgctttaatccatgataat |
390 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
7209851 |
caacaatcatcatgctttaatccatgataat |
7209881 |
T |
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