View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15648_high_9 (Length: 241)

Name: NF15648_high_9
Description: NF15648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15648_high_9
NF15648_high_9
[»] chr5 (24 HSPs)
chr5 (21-228)||(33467881-33468086)
chr5 (87-197)||(22482238-22482348)
chr5 (131-220)||(2483711-2483800)
chr5 (89-197)||(9275439-9275547)
chr5 (131-200)||(22811072-22811141)
chr5 (88-197)||(41834941-41835050)
chr5 (86-197)||(40495310-40495421)
chr5 (87-197)||(5710339-5710449)
chr5 (89-171)||(13253038-13253120)
chr5 (131-225)||(20068935-20069029)
chr5 (78-200)||(35847834-35847956)
chr5 (84-197)||(10058123-10058236)
chr5 (87-197)||(35760238-35760348)
chr5 (131-192)||(24036627-24036688)
chr5 (131-171)||(2694757-2694797)
chr5 (84-168)||(24045908-24045992)
chr5 (131-197)||(8049048-8049114)
chr5 (86-193)||(27021181-27021288)
chr5 (131-197)||(39987964-39988030)
chr5 (131-197)||(3667903-3667969)
chr5 (158-196)||(18637375-18637413)
chr5 (131-171)||(2430294-2430334)
chr5 (131-195)||(19784864-19784928)
chr5 (83-155)||(41741572-41741644)
[»] chr2 (40 HSPs)
chr2 (87-228)||(30599858-30599999)
chr2 (131-220)||(3853921-3854010)
chr2 (131-200)||(23359928-23359997)
chr2 (86-197)||(9988454-9988565)
chr2 (87-197)||(1944993-1945103)
chr2 (94-220)||(18511123-18511249)
chr2 (88-170)||(39141425-39141507)
chr2 (85-170)||(28641713-28641798)
chr2 (88-196)||(31224725-31224833)
chr2 (143-202)||(26806265-26806324)
chr2 (86-197)||(36312321-36312431)
chr2 (87-197)||(5916196-5916305)
chr2 (87-197)||(8170357-8170466)
chr2 (150-200)||(23377545-23377595)
chr2 (131-197)||(34433304-34433370)
chr2 (88-197)||(2213550-2213659)
chr2 (88-169)||(7472629-7472710)
chr2 (88-197)||(25747837-25747945)
chr2 (131-196)||(27911451-27911516)
chr2 (86-166)||(31562640-31562720)
chr2 (83-197)||(2215296-2215410)
chr2 (158-197)||(16518869-16518908)
chr2 (87-197)||(36548243-36548353)
chr2 (90-200)||(1763261-1763370)
chr2 (131-197)||(2213691-2213757)
chr2 (131-197)||(11759788-11759853)
chr2 (87-197)||(12110918-12111027)
chr2 (131-196)||(16467131-16467196)
chr2 (87-197)||(28261338-28261448)
chr2 (131-193)||(30007551-30007613)
chr2 (131-197)||(41580708-41580774)
chr2 (131-196)||(3602458-3602522)
chr2 (84-197)||(7295299-7295412)
chr2 (84-197)||(7296199-7296312)
chr2 (157-202)||(14531978-14532023)
chr2 (88-197)||(28127242-28127351)
chr2 (143-196)||(42089538-42089591)
chr2 (135-195)||(10918649-10918709)
chr2 (89-169)||(32502057-32502137)
chr2 (137-197)||(38600447-38600507)
[»] chr1 (32 HSPs)
chr1 (88-228)||(43730002-43730142)
chr1 (85-197)||(13056056-13056168)
chr1 (87-197)||(31223433-31223543)
chr1 (85-197)||(35569157-35569269)
chr1 (87-197)||(1199886-1199996)
chr1 (87-197)||(20800234-20800344)
chr1 (87-200)||(25061282-25061395)
chr1 (84-197)||(47123445-47123558)
chr1 (131-200)||(4347030-4347098)
chr1 (84-197)||(5410698-5410811)
chr1 (87-167)||(7826311-7826391)
chr1 (85-197)||(10470649-10470760)
chr1 (85-195)||(26058302-26058412)
chr1 (86-195)||(27801608-27801717)
chr1 (87-197)||(42850176-42850286)
chr1 (87-197)||(48510967-48511077)
chr1 (87-197)||(50977297-50977407)
chr1 (85-193)||(13344836-13344943)
chr1 (131-198)||(4369804-4369870)
chr1 (132-197)||(15884286-15884351)
chr1 (83-200)||(47981749-47981865)
chr1 (87-195)||(50406191-50406299)
chr1 (84-192)||(41989-42097)
chr1 (89-169)||(11023289-11023369)
chr1 (131-191)||(47085898-47085958)
chr1 (86-197)||(12468271-12468381)
chr1 (131-197)||(40229471-40229537)
chr1 (85-196)||(40352451-40352561)
chr1 (135-200)||(5930816-5930881)
chr1 (148-197)||(29759710-29759759)
chr1 (89-197)||(25230066-25230173)
chr1 (141-197)||(40709235-40709290)
[»] chr6 (16 HSPs)
chr6 (87-228)||(29682171-29682312)
chr6 (90-228)||(16121960-16122098)
chr6 (88-196)||(10826127-10826235)
chr6 (87-197)||(6208019-6208128)
chr6 (87-169)||(13739268-13739350)
chr6 (87-169)||(13744768-13744850)
chr6 (83-197)||(29409203-29409317)
chr6 (131-197)||(16442350-16442416)
chr6 (143-197)||(16548174-16548228)
chr6 (131-204)||(1499984-1500056)
chr6 (131-199)||(3605752-3605819)
chr6 (131-191)||(17829998-17830058)
chr6 (87-197)||(1312395-1312505)
chr6 (83-197)||(21254831-21254944)
chr6 (87-200)||(15151461-15151574)
chr6 (86-197)||(33898960-33899071)
[»] chr8 (28 HSPs)
chr8 (88-228)||(26490945-26491085)
chr8 (89-225)||(31246273-31246409)
chr8 (87-225)||(3467548-3467686)
chr8 (85-197)||(22936747-22936859)
chr8 (85-197)||(28425426-28425538)
chr8 (89-196)||(4941739-4941846)
chr8 (82-170)||(30759256-30759344)
chr8 (89-197)||(41289016-41289124)
chr8 (148-200)||(19649226-19649278)
chr8 (87-195)||(22552696-22552804)
chr8 (131-225)||(23018111-23018205)
chr8 (148-202)||(29970840-29970894)
chr8 (131-197)||(40742167-40742233)
chr8 (131-196)||(41891820-41891884)
chr8 (148-197)||(43550934-43550983)
chr8 (85-197)||(440143-440255)
chr8 (90-170)||(32597863-32597943)
chr8 (115-171)||(40792188-40792244)
chr8 (148-191)||(10552926-10552969)
chr8 (90-196)||(42143323-42143429)
chr8 (131-197)||(3619069-3619134)
chr8 (131-197)||(15206739-15206805)
chr8 (131-196)||(42149049-42149114)
chr8 (87-200)||(3465396-3465509)
chr8 (89-166)||(27649819-27649896)
chr8 (131-196)||(36779435-36779499)
chr8 (131-171)||(35239567-35239607)
chr8 (131-171)||(45147250-45147290)
[»] chr7 (32 HSPs)
chr7 (85-225)||(42752132-42752272)
chr7 (131-228)||(41625500-41625597)
chr7 (85-197)||(3622401-3622513)
chr7 (85-225)||(39634106-39634246)
chr7 (86-197)||(34365924-34366035)
chr7 (83-195)||(41715715-41715827)
chr7 (85-197)||(37562626-37562738)
chr7 (90-197)||(39391083-39391190)
chr7 (90-197)||(47021975-47022082)
chr7 (131-197)||(48459766-48459832)
chr7 (91-196)||(386428-386533)
chr7 (91-192)||(46541661-46541762)
chr7 (86-194)||(37639489-37639597)
chr7 (88-196)||(40903112-40903219)
chr7 (87-170)||(34010422-34010504)
chr7 (90-169)||(43631642-43631721)
chr7 (131-197)||(3375546-3375612)
chr7 (131-197)||(3750742-3750808)
chr7 (131-193)||(10371945-10372007)
chr7 (148-202)||(20088920-20088974)
chr7 (143-197)||(38230124-38230178)
chr7 (131-197)||(44967386-44967452)
chr7 (131-200)||(1766478-1766547)
chr7 (86-169)||(39977636-39977719)
chr7 (148-202)||(4228598-4228652)
chr7 (131-197)||(45557456-45557522)
chr7 (87-195)||(32186998-32187106)
chr7 (131-200)||(38494269-38494338)
chr7 (131-196)||(42740449-42740514)
chr7 (131-195)||(2839349-2839412)
chr7 (131-195)||(16079460-16079524)
chr7 (131-202)||(36920165-36920236)
[»] chr4 (47 HSPs)
chr4 (87-225)||(54488597-54488735)
chr4 (133-228)||(26824220-26824315)
chr4 (87-225)||(38306003-38306141)
chr4 (84-197)||(39187754-39187867)
chr4 (86-195)||(41866176-41866285)
chr4 (85-197)||(43772077-43772189)
chr4 (82-197)||(54150546-54150661)
chr4 (88-197)||(6138577-6138686)
chr4 (131-200)||(22699759-22699828)
chr4 (131-200)||(22980702-22980771)
chr4 (131-200)||(22994289-22994358)
chr4 (131-200)||(46958040-46958109)
chr4 (87-195)||(48550239-48550347)
chr4 (131-196)||(48550427-48550492)
chr4 (88-169)||(48908321-48908402)
chr4 (87-197)||(13167545-13167655)
chr4 (131-197)||(16566325-16566391)
chr4 (87-197)||(19592187-19592297)
chr4 (87-197)||(46830025-46830135)
chr4 (88-197)||(14072523-14072631)
chr4 (88-197)||(26651805-26651914)
chr4 (131-196)||(36150625-36150690)
chr4 (131-196)||(42944898-42944963)
chr4 (84-197)||(51922960-51923073)
chr4 (91-184)||(54153077-54153170)
chr4 (87-199)||(5025547-5025658)
chr4 (85-169)||(28987066-28987150)
chr4 (87-171)||(32238015-32238099)
chr4 (89-197)||(39636805-39636913)
chr4 (89-169)||(43781477-43781557)
chr4 (85-200)||(14564100-14564215)
chr4 (88-197)||(25312735-25312844)
chr4 (84-145)||(26824140-26824202)
chr4 (131-197)||(54487220-54487286)
chr4 (148-200)||(28947766-28947818)
chr4 (85-197)||(29149261-29149373)
chr4 (131-198)||(4954051-4954118)
chr4 (94-197)||(55638718-55638821)
chr4 (131-197)||(49519750-49519816)
chr4 (84-169)||(6505249-6505334)
chr4 (131-200)||(28752532-28752600)
chr4 (131-192)||(33574203-33574264)
chr4 (131-196)||(33843803-33843868)
chr4 (85-170)||(53532024-53532109)
chr4 (150-191)||(53939482-53939523)
chr4 (133-197)||(20677069-20677133)
chr4 (141-197)||(40286302-40286358)
[»] chr3 (40 HSPs)
chr3 (85-197)||(50664793-50664905)
chr3 (131-228)||(49526669-49526766)
chr3 (87-197)||(15511332-15511442)
chr3 (87-197)||(38172263-38172373)
chr3 (87-197)||(48189398-48189507)
chr3 (135-200)||(7012672-7012737)
chr3 (85-197)||(23496352-23496464)
chr3 (84-197)||(4984616-4984729)
chr3 (131-197)||(31084242-31084308)
chr3 (84-197)||(10334173-10334286)
chr3 (115-196)||(14651086-14651166)
chr3 (131-199)||(10852713-10852781)
chr3 (88-196)||(10853224-10853332)
chr3 (86-166)||(52966764-52966844)
chr3 (135-202)||(23918872-23918939)
chr3 (87-198)||(44225599-44225709)
chr3 (84-171)||(44939369-44939456)
chr3 (83-194)||(16246048-16246157)
chr3 (131-196)||(19877453-19877518)
chr3 (88-197)||(26519699-26519808)
chr3 (131-200)||(41459247-41459316)
chr3 (88-169)||(42318392-42318473)
chr3 (148-197)||(52931589-52931638)
chr3 (87-184)||(55154549-55154646)
chr3 (83-203)||(32932066-32932185)
chr3 (137-197)||(34561143-34561203)
chr3 (86-197)||(42475744-42475855)
chr3 (86-197)||(3348278-3348389)
chr3 (86-197)||(30811487-30811597)
chr3 (137-196)||(38340841-38340900)
chr3 (85-200)||(52813247-52813362)
chr3 (131-197)||(8424730-8424795)
chr3 (131-197)||(21225025-21225091)
chr3 (90-200)||(25181242-25181351)
chr3 (87-165)||(38125398-38125476)
chr3 (131-197)||(53179883-53179949)
chr3 (131-192)||(29252125-29252186)
chr3 (148-196)||(42644298-42644346)
chr3 (85-125)||(43087499-43087539)
chr3 (148-204)||(53567960-53568016)
[»] scaffold0369 (1 HSPs)
scaffold0369 (87-197)||(8484-8594)
[»] scaffold0003 (1 HSPs)
scaffold0003 (131-225)||(301532-301626)
[»] scaffold0007 (1 HSPs)
scaffold0007 (88-197)||(29080-29188)
[»] scaffold0041 (1 HSPs)
scaffold0041 (88-196)||(46799-46906)
[»] scaffold0983 (1 HSPs)
scaffold0983 (88-194)||(2225-2331)
[»] scaffold0005 (1 HSPs)
scaffold0005 (85-200)||(253160-253275)
[»] scaffold0217 (1 HSPs)
scaffold0217 (84-169)||(1980-2065)
[»] scaffold0009 (1 HSPs)
scaffold0009 (143-200)||(199381-199438)
[»] scaffold0172 (1 HSPs)
scaffold0172 (86-197)||(15213-15323)
[»] scaffold0394 (1 HSPs)
scaffold0394 (85-171)||(5784-5870)
[»] scaffold0014 (1 HSPs)
scaffold0014 (131-197)||(118410-118476)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 33467881 - 33468086
Alignment:
Q  21 tactcattaaatctgatttgagtggagctatggtgttactaaaatgaaaattttatcaatacatttagtgtgtgtttggtttggcggtggctataattga 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||| || ||||||    
T  33467881 tactcattaaatctgatttgagtggagctatggtgttactaaaatgaaaattttatcaatacatttagtatgt--ttggtttgacggtggttagaattga 33467978  T
Q  121 ttctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttat 220  Q
    || |||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  33467979 ttttaacaaaattgattttgatagaactgattttggttaaaagtgagttgagtgtatattgatttgtgtttggatacctttatgcagaaatgattcttat 33468078  T
Q  221 taatttat 228  Q
    ||||||||    
T  33468079 taatttat 33468086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 22482348 - 22482238
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||| ||  | |||||||| | | |  ||||||||||| |||| ||||||||||||||||||||||||  || |||||||||     
T  22482348 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 22482249  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  22482248 tgtttggatac 22482238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 2483711 - 2483800
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttat 220  Q
    |||||||||| | ||| ||||||| ||||||||||||||||  || ||||||||| |||||||||| ||||| ||| || ||||||||||    
T  2483711 attgattttgttggaattgattttagttaaaagtgagttgaatgtgaattgatttatgtttggataactttaagcaaaagtgattcttat 2483800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 9275439 - 9275547
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgatttgt 187  Q
    ||||||||||||||||||||||  | |||||||| | | || ||||| ||| | |||| |||||||||||||||||||||| ||| || ||||||||| |    
T  9275439 tgtgtgtttggtttggcggtggggaaaattgattttgataaaattgagtttaagagaattgattttggttaaaagtgagtt-agatgttaattgatttat 9275537  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  9275538 gtttggatac 9275547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 22811141 - 22811072
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||| ||| ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||||||||    
T  22811141 attgatcttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 22811072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 41835050 - 41834941
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| |||||||||  | |||||||| | | |  ||| | ||||| |||| |||||||||||||||||||||||  ||| ||||||||| |    
T  41835050 gtgtgtgtttggtatggcggtggggagaattgattttgatagaattcagtttgagagaattgattttggttaaaagtgagttggaagtgaattgatttat 41834951  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  41834950 gtttggatac 41834941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 40495310 - 40495421
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    ||||||||||||||| |||||| ||  | |||||||| | | |  ||||| ||||||| || ||||||||||||||||||||||    ||||||||||||    
T  40495310 tagtgtgtgtttggtatggcggcgggaagaattgattttgatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtaaattgattt 40495409  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  40495410 atgtttggatac 40495421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 5710339 - 5710449
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||| | |||||||| | | |  || || ||||| |||| ||||||||||||||||||||||  | || ||||| |||     
T  5710339 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagtttggtgtgaattgcttta 5710438  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  5710439 tgtttggatac 5710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 13253038 - 13253120
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttga 171  Q
    ||||||||||||| ||||||||| | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||||    
T  13253038 tgtgtgtttggttgggcggtggcgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttga 13253120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 20069029 - 20068935
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    ||||| |||||| ||| |||||||||| ||||||||||||||  |||||| |||| |||||||||||  | ||||| || |||||||| ||||||    
T  20069029 attgagtttgatcgaattgattttggtcaaaagtgagttgagtttaaatttatttatgtttggatacactaatgcaaaagtgattcttgttaatt 20068935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 35847834 - 35847956
Alignment:
Q  78 aatacatttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaa 177  Q
    ||||||||||||||||||||||||  ||||||  || |||||||| | | |  ||||| |||||  ||| |||||||||||| |||||||||  || |||    
T  35847834 aatacatttagtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagttatgactaa 35847933  T
Q  178 attgatttgtgtttggatacctt 200  Q
    | || ||| ||||||||||||||    
T  35847934 agtggtttatgtttggatacctt 35847956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 10058236 - 10058123
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    |||||||||||||| || |||||||||  | |||||||| | | |  ||||| ||||| || | |||||||||||||||||||||||  | | |||||||    
T  10058236 tttagtgtgtgtttagtatggcggtggggagaattgattttgatataattgagtttgagagtattgattttggttaaaagtgagttggaaatgaattgat 10058137  T
Q  184 ttgtgtttggatac 197  Q
    || |||||||||||    
T  10058136 ttatgtttggatac 10058123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 35760348 - 35760238
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| | |||||||  | |||||||| | | |  ||||| ||||| |||| |||||||| | |||||||||||||  || |||||||||     
T  35760348 agtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgattta 35760249  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  35760248 tgtttggatac 35760238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 24036688 - 24036627
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttg 192  Q
    |||||||||||||||| |||||||| | |||||||||||||  ||||| |||||| ||||||    
T  24036688 attgattttgatagaattgattttgatgaaaagtgagttgaatgtaaaatgatttatgtttg 24036627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 2694757 - 2694797
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttga 171  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  2694757 attgattttgattgaattgattttggttaaaagtgagttga 2694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 24045992 - 24045908
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagt 168  Q
    |||||| |||||||||| |||||||||  | |||||||| | | |  ||||| ||||| |||| |||||||||||||||||||||    
T  24045992 tttagtatgtgtttggtatggcggtggtgagaattgattttgatagaattgaatttgagagaattgattttggttaaaagtgagt 24045908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 8049048 - 8049114
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  8049048 attgagtttgagagaattgattttggttaaaagtgagtttgag-gttaattgatttatgtttggatac 8049114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 27021288 - 27021181
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    |||| |||||||||||||||||||| || || ||||| | | |  ||||| ||||| | || ||||||||||||||| |||||| |  || |||||||||    
T  27021288 tagtatgtgtttggtttggcggtggttagaactgattttgatataattgagtttgagaaaattgattttggttaaaaatgagttaaatgtgaattgattt 27021189  T
Q  186 gtgtttgg 193  Q
     |||||||    
T  27021188 atgtttgg 27021181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 39987964 - 39988030
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  39987964 attgagtttgagagaattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggatac 39988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 3667969 - 3667903
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| |||||||| | |||||||||||||  || ||||||||| |||||||||||    
T  3667969 attgagtttgagagaattgattttgttaaaaagtgagttgaatgtgaattgatttatgtttggatac 3667903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 18637413 - 18637375
Alignment:
Q  158 taaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  18637413 taaaagtgagttgagagtacagtgatttgtgtttggata 18637375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 2430294 - 2430334
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttga 171  Q
    ||||| ||||| |||| ||||||||||||||||||||||||    
T  2430294 attgagtttgagagaattgattttggttaaaagtgagttga 2430334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 19784928 - 19784864
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggat 195  Q
    |||||||||  | ||| ||||||||||||||||||||||||  ||||| || ||| |||||||||    
T  19784928 attgattttatttgaattgattttggttaaaagtgagttgaatgtaaagtggtttatgtttggat 19784864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 41741572 - 41741644
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttg 155  Q
    ||||||||||||||| |||  ||  ||| ||||||||||||| | |  |||||||||||||||| ||||||||    
T  41741572 atttagtgtgtgttttgttcagctttggatataattgattctgatagaattgattttgatagaattgattttg 41741644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 30599858 - 30599999
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||| |||||||||||||||||| || ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  30599858 agtgtatgtttggtttggcggtggttagaattgattctaacaaaattaattttgatagaattgattttggttaaaagtgagttgagtgtcaattgatttg 30599957  T
Q  187 tgtttggatacctttatgcagaaatgattcttattaatttat 228  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  30599958 tgtttggatacctttatgcataaatgattcttattaatttat 30599999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 3854010 - 3853921
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttat 220  Q
    |||||||||||||||| |||||||| |||||||||||||||  |||||||||||| ||||||||||| || ||| | || ||||||||||    
T  3854010 attgattttgatagaattgattttgattaaaagtgagttgaatgtaaattgatttatgtttggatacattcatgtaaaattgattcttat 3853921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 23359928 - 23359997
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||| ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||||||||    
T  23359928 attgattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 23359997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 9988454 - 9988565
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    |||||||||||||||||||||||||  | |||||||| | | |  ||||| ||||| |||| ||||||| |||||||||||||||   || |||||||||    
T  9988454 tagtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtgagttggatgtgaattgattt 9988553  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  9988554 atgtttggatac 9988565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 1944993 - 1945103
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||| ||  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||||  || |||||||||     
T  1944993 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 1945092  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  1945093 tgtttggatac 1945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 18511249 - 18511123
Alignment:
Q  94 gtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttgg 193  Q
    ||||||||  |||||||  | |||||||| | | || ||||||||||||| || ||||||||||||||||||| || |  || ||||||||| |||||||    
T  18511249 gtttggttcagcggtggagagaattgattttgataaaattgattttgatataattgattttggttaaaagtgatttaaatgttaattgatttatgtttgg 18511150  T
Q  194 atacctttatgcagaaatgattcttat 220  Q
    |||| |  ||| | |||||||||||||    
T  18511149 atacatcaatgtaaaaatgattcttat 18511123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 39141425 - 39141507
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttg 170  Q
    |||||||||||||| ||||||||| | |||||||| | | |  ||||| ||||| |||| |||||||||||||||||||||||    
T  39141425 gtgtgtgtttggttgggcggtggcgagaattgattttgatataattgagtttgaaagaattgattttggttaaaagtgagttg 39141507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 28641798 - 28641713
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttg 170  Q
    |||||||||||||||||||||| ||| || |||||||| |||    ||||||| ||| |||| |||||||||||||| ||||||||    
T  28641798 ttagtgtgtgtttggtttggcgatggataaaattgattttaattgaattgattctgagagaattgattttggttaaatgtgagttg 28641713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 31224833 - 31224725
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    |||||| ||||||||||||||| | | |||||||| | | |  ||||| ||||| |||| ||||||| |||||||||||||||   || ||||||||| |    
T  31224833 gtgtgtatttggtttggcggtgacgaaaattgattttgatagaattgagtttgaaagaattgattttagttaaaagtgagttggatgtgaattgatttat 31224734  T
Q  188 gtttggata 196  Q
    |||||||||    
T  31224733 gtttggata 31224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 26806265 - 26806324
Alignment:
Q  143 agaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggataccttta 202  Q
    |||| |||||||| |||||||||||||||| | ||| |||||| ||||||||||||||||    
T  26806265 agaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggataccttta 26806324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 36312431 - 36312321
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    ||||||||||||||| |||||| ||  | |||||||| | | |  ||| ||||||| |||| ||||||||||||||||||||||||  || |||||| ||    
T  36312431 tagtgtgtgtttggtatggcggcggggagaattgattttgatagaattaattttgagagaattgattttggttaaaagtgagttgaatgtgaattga-tt 36312333  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  36312332 atgtttggatac 36312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 5916196 - 5916305
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||| ||  | |||||||| | | |  ||| ||||||| |||| ||||||||||||||||||||||||  || |||||| ||     
T  5916196 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattaattttgagagaattgattttggttaaaagtgagttgaatgtgaattga-tta 5916294  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  5916295 tgtttggatac 5916305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 8170466 - 8170357
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||||||||||||  ||||||||| | |||| ||| | | |  ||||| ||||| |||| |||||||| |||||||||||||||  ||||||||| ||     
T  8170466 agtgtgtgtttggtagggcggtggcgagaattaattttgatagaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaaattga-tta 8170368  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  8170367 tgtttggatac 8170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 23377595 - 23377545
Alignment:
Q  150 attttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    ||||||||||||||||||||||  |||| ||||||| ||||||||||||||    
T  23377595 attttggttaaaagtgagttgaatgtaagttgatttatgtttggatacctt 23377545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 34433304 - 34433370
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| |||||||| |||||||||||||||  || ||||||||| |||||||||||    
T  34433304 attgagtttgacagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggatac 34433370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 2213659 - 2213550
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| | |||||||  | |||||||| | | |  ||||| ||||| |||| |||||||| | |||||||||||||  || ||||||||| |    
T  2213659 gtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttat 2213560  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  2213559 gtttggatac 2213550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 7472629 - 7472710
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    ||||||||||||| || ||||||| | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  7472629 gtgtgtgtttggtatgacggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 7472710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 25747837 - 25747945
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||||  |||||||  |||||||| | | | |  ||||| ||||| |||| |||||||| |||||||||||||||  || ||||||||| |    
T  25747837 gtgtgtgtttggttccgcggtggtgataattgagtttgatagaattgagtttgagagaattgattttgattaaaagtgagttgaatgt-aattgatttat 25747935  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  25747936 gtttggatac 25747945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 27911516 - 27911451
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||||||||||||||| ||| ||||||||||||||||||    || ||||||||| ||||||||||    
T  27911516 attgattttgatagaattgagtttggttaaaagtgagtttgatgtgaattgatttatgtttggata 27911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 31562640 - 31562720
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtga 166  Q
    ||||| ||||||||| ||| |||||| | |||||||| | | || ||||| ||||| |||| |||||||||||||||||||    
T  31562640 tagtgcgtgtttggtatggtggtggcgagaattgattttgataaaattgagtttgagagaattgattttggttaaaagtga 31562720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 197
Target Start/End: Complemental strand, 2215410 - 2215296
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattg 181  Q
    |||||||||||||||||| | ||||| |  | |||||||| | | |  |||||  |||| |||| |||||||||||||||||||| ||||| || |||||    
T  2215410 atttagtgtgtgtttggtatagcggttgtgagaattgattttgatagaattgagcttgagagaattgattttggttaaaagtgagtttgag-gtgaattg 2215312  T
Q  182 atttgtgtttggatac 197  Q
    |||| |||||||||||    
T  2215311 atttatgtttggatac 2215296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 16518908 - 16518869
Alignment:
Q  158 taaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  16518908 taaaagtgagttgagggtaaaatgatttgtgtttggatac 16518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 36548353 - 36548243
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagt-tgagagtaaattgattt 185  Q
    |||||||||||||| |||||||||  | |||||||| | | |  ||||| ||||| |||| |||||||| |||||||||||| |||  || |||||||||    
T  36548353 agtgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtctga-tgtgaattgattt 36548255  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  36548254 atgtttggatac 36548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 1763370 - 1763261
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgt 189  Q
    ||||||||||||  |||||| | | |||||||| | | || |||||||||| || || ||||||||||||||| ||||||||   |||| |||||| |||    
T  1763370 gtgtgtttggttgtgcggtgacgagaattgattttgataaaattgattttg-taaaattgattttggttaaaattgagttgaatttaaagtgatttatgt 1763272  T
Q  190 ttggatacctt 200  Q
    || ||||||||    
T  1763271 ttagatacctt 1763261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 2213757 - 2213691
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| ||||||||||||||||||||||    || ||||||||||| |||||||||    
T  2213757 attgagtttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttgtctttggatac 2213691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 11759788 - 11759853
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||||||||| || || |||||||| |||||||||||||||  |||||||| |||||||||| ||||    
T  11759788 attgattttg-taaaattgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatac 11759853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 12111027 - 12110918
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  |||||| | | |||||||| | | |  ||||||||||  | || ||||||||||||||||||||||||   |||| ||||||     
T  12111027 agtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtca-aattgattttggttaaaagtgagttgaatataaagtgattta 12110929  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  12110928 tgtttggatac 12110918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 16467196 - 16467131
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgatttgtgtttggata 196  Q
    ||||||||||  | || |||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  16467196 attgattttggcataattgattttggttaaaagtgagtt-agatgtaaattgatttatgtttggata 16467131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 28261448 - 28261338
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||||||||||| | ||||||||  | |||| ||| ||| |  ||||| ||||| |||| |||||||| ||||||||||||||   || |||||||||     
T  28261448 agtgtgtgtttgggtgggcggtggagagaattaattttaatacaattgagtttgagagaattgattttgcttaaaagtgagttggatgtgaattgattta 28261349  T
Q  187 tgtttggatac 197  Q
    | |||||||||    
T  28261348 tatttggatac 28261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 30007551 - 30007613
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttgg 193  Q
    ||||| ||||| |||| | ||||||||||||||||||||||  || ||||||||| |||||||    
T  30007551 attgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttgg 30007613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 41580708 - 41580774
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| ||||||||||||||||||||||    ||||||| |||| |||||||||||    
T  41580708 attgagtttgagagaattgattttggttaaaagtgagtttgatgtaaattaatttatgtttggatac 41580774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 3602458 - 3602522
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||||||||||||||| ||||||||  |||||||||||||| | | |||||| || ||||||||||    
T  3602458 attgattttgatagaattgattttgtctaaaagtgagttga-acttaattgaattatgtttggata 3602522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 7295299 - 7295412
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    |||||||||||||||| ||| ||| | | |||||| ||| | | |  ||||| ||||| |||| ||||| ||||||||| ||||||    ||||||||||    
T  7295299 tttagtgtgtgtttggattgacggcgtcgataattaattttgatagaattgagtttgagagaattgattctggttaaaaatgagtttgacgtaaattgat 7295398  T
Q  184 ttgtgtttggatac 197  Q
    || |||||||||||    
T  7295399 ttatgtttggatac 7295412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 7296312 - 7296199
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    |||||||||||||||| |||| || | | |||||||| | | | |  ||||| ||||| |||| ||||||||||||||| ||||||    || |||||||    
T  7296312 tttagtgtgtgtttggattggtggcgccgataattgactttgatataattgagtttgagagaattgattttggttaaaaatgagtttgatgtgaattgat 7296213  T
Q  184 ttgtgtttggatac 197  Q
    || |||||||||||    
T  7296212 ttatgtttggatac 7296199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 14531978 - 14532023
Alignment:
Q  157 ttaaaagtgagttgagagtaaattgatttgtgtttggataccttta 202  Q
    |||||||||||||||  | ||| |||||||||||||||||||||||    
T  14531978 ttaaaagtgagttgaatgaaaagtgatttgtgtttggataccttta 14532023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 28127242 - 28127351
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| | |||||||  | |||||||| | | |  ||| | ||||| |||| |||||||| | |||||||||||||  || ||||||||| |    
T  28127242 gtgtgtgtttggtatagcggtggggagaattgattttgatagaatttagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttat 28127341  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  28127342 gtttggatac 28127351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 42089538 - 42089591
Alignment:
Q  143 agaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||| |||||||| |||||||||||||||  || ||||||||| ||||||||||    
T  42089538 agaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggata 42089591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 10918709 - 10918649
Alignment:
Q  135 attttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggat 195  Q
    |||||||  ||| ||||||||| ||||||||||||||  ||||| |||||| |||||||||    
T  10918709 attttgactgaattgattttggataaaagtgagttgaatgtaaagtgatttatgtttggat 10918649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 32502137 - 32502057
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||| ||||||| |  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  32502137 tgtgtgtttggtatggcggtcgtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 32502057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 38600447 - 38600507
Alignment:
Q  137 tttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| |||| ||||||||||||||||||||||    |||||||||||| |||||| ||||    
T  38600447 tttgagagaattgattttggttaaaagtgagtttgatgtaaattgatttatgtttgaatac 38600507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 43730002 - 43730142
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    |||| ||||||||||||| ||||||| ||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||| || |||||||||||    
T  43730002 gtgtatgtttggtttggcagtggctagaattgattctaacaaaattaattttgatataattgattttggttaaaagtgagttgagtgtcaattgatttgt 43730101  T
Q  188 gtttggatacctttatgcagaaatgattcttattaatttat 228  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  43730102 gtttggatacctttatgcataagtgattcttattaatttat 43730142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 13056168 - 13056056
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||| |||||||||| |||||||||| | | |  || || ||||| |||| ||||||||||||||||||||||||| || ||||||||    
T  13056168 ttagtgtgtgtttggtatggcggtggcgataattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagttgagtgtgaattgatt 13056069  T
Q  185 tgtgtttggatac 197  Q
    | |||||| ||||    
T  13056068 tatgtttgaatac 13056056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 31223543 - 31223433
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||||||||||||||||||||||  | |||||||| ||| |  ||||| ||||| |||| |||||||||||||||||||||||   || |||||||||     
T  31223543 agtgtgtgtttggtttggcggtggggagaattgattttaatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgattta 31223444  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  31223443 tgtttggatac 31223433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 35569157 - 35569269
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||| |||||| ||  | |||||||| | | |  ||||||||||| |||| ||||||||||||||||||||||||  || ||||||||    
T  35569157 ttagtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatt 35569256  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  35569257 tatgtttggatac 35569269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 1199996 - 1199886
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| | ||||||||||||||||||||||  || |||||||||     
T  1199996 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgattta 1199897  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  1199896 tgtttggatac 1199886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 20800234 - 20800344
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||| ||  | |||||||| | | |  ||||||||||| |||| ||||||||||||||||||||||||  || |||||||||     
T  20800234 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 20800333  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  20800334 tgtttggatac 20800344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 25061395 - 25061282
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  |||||| | | |||||||| |   || |||||||||| | ||| ||||||||||||||||||||||||   |||||||||||     
T  25061395 agtgtgtgtttggttctgcggtgacaaaaattgattttgttaaaattgattttggttgaattgattttggttaaaagtgagttgaacataaattgattta 25061296  T
Q  187 tgtttggatacctt 200  Q
    ||||||||||||||    
T  25061295 tgtttggatacctt 25061282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 47123558 - 47123445
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattga 182  Q
    ||||||||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| |||||||| ||||||||||||| ||| || ||||||    
T  47123558 tttagtgtgtgtttggtatggcggtggcaaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt-agatgtgaattga 47123460  T
Q  183 tttgtgtttggatac 197  Q
    ||| |||||||||||    
T  47123459 tttttgtttggatac 47123445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 4347098 - 4347030
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||| ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||||||||    
T  4347098 attgattttg-tagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 4347030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 5410811 - 5410698
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    |||| ||||||||||||||||||| ||| | |||||||| | | |  ||||| ||||| |||| |||||||| ||||||||||||||   ||||||||||    
T  5410811 tttaatgtgtgtttggtttggcggcggcgagaattgattttgatataattgaatttgaaagaattgattttgattaaaagtgagttggatgtaaattgat 5410712  T
Q  184 ttgtgtttggatac 197  Q
    || |||||| ||||    
T  5410711 ttatgtttgaatac 5410698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 7826311 - 7826391
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgag 167  Q
    ||||||||||||||||||||||||  | |||||||| | | |  ||||||||||| |||| ||||||||||||||||||||    
T  7826311 agtgtgtgtttggtttggcggtggagaaaattgattttgatagaattgattttgagagaattgattttggttaaaagtgag 7826391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 10470760 - 10470649
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    ||||||||||||||||  ||||||||| | |||||||| | | |  ||||| ||||| |||| |||||||| |||||||||||||||  ||||||||| |    
T  10470760 ttagtgtgtgtttggtagggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaaattga-t 10470662  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  10470661 tatgtttggatac 10470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 26058412 - 26058302
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgat 183  Q
    |||||||||||||||| |||||||||| | |||||||| | | |  ||||||||| | |||| |||||||| |||||||||| || ||| ||||||||||    
T  26058412 ttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgaatt-agatgtaaattgat 26058314  T
Q  184 ttgtgtttggat 195  Q
    || |||||||||    
T  26058313 ttatgtttggat 26058302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 27801608 - 27801717
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgatt 184  Q
    ||||||||||||||| || ||||||| | |||||||| | | |  ||||||||| | |||| |||||||| ||||||||||||| ||| |||||||||||    
T  27801608 tagtgtgtgtttggtatgacggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagtt-agatgtaaattgatt 27801706  T
Q  185 tgtgtttggat 195  Q
    | |||||||||    
T  27801707 tatgtttggat 27801717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 42850176 - 42850286
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||| | |||||||| | | |  ||||| ||| |  ||| |||||||||||||||||||||||   || |||||||||     
T  42850176 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtgagttggatgtgaattgattta 42850275  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  42850276 tgtttggatac 42850286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 48511077 - 48510967
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||| ||| | |||||||| | |    ||||| ||||| | || ||||||||||||||||||||||||  || |||||||||     
T  48511077 agtgtgtgtttggtatggcggcggcgagaattgattttgattgaattgagtttgagataattgattttggttaaaagtgagttgaatgtgaattgattta 48510978  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  48510977 tgtttggatac 48510967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 50977297 - 50977407
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||| | |||||||| | | |  || || ||||| |||| ||||||||||||||||||||||  | || ||||| |||     
T  50977297 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagtttggtgtgaattgtttta 50977396  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  50977397 tgtttggatac 50977407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 13344943 - 13344836
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||| |||||||||||| |||||||   |||||||||| | |    |||||||||| ||||| ||||||||||||||||||||||||  ||||| |||||    
T  13344943 ttagcgtgtgtttggttgggcggtgaagataattgattttgattgaattgattttg-tagaattgattttggttaaaagtgagttgaacgtaaagtgatt 13344845  T
Q  185 tgtgtttgg 193  Q
    | |||||||    
T  13344844 tatgtttgg 13344836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 4369804 - 4369870
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacc 198  Q
    ||||||||||| |||| ||||||||||||||||||||||||  || ||||||||| ||||||| ||||    
T  4369804 attgattttgagagaattgattttggttaaaagtgagttga-tgtgaattgatttatgtttgggtacc 4369870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 15884351 - 15884286
Alignment:
Q  132 ttgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||| ||||| |||| |||||||||||||||||||||||   || ||||||||| |||||||||||    
T  15884351 ttgagtttgacagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 15884286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 47981749 - 47981865
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattga 182  Q
    |||||| ||||||||||||  | |||| | | |||||||| ||| || |||||||||| || || | ||||||||||||| ||||||||   |||| |||    
T  47981749 atttagcgtgtgtttggttgtgtggtgacgagaattgattttaataaaattgattttg-taaaattaattttggttaaaattgagttgaatttaaagtga 47981847  T
Q  183 tttgtgtttggatacctt 200  Q
    ||| ||||||||||||||    
T  47981848 tttatgtttggatacctt 47981865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 50406299 - 50406191
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgattt 185  Q
    |||||||||||||| | |||||||| | |||||||| | | || ||||| ||||| |||  |||||||| ||||||||||||| ||| || |||||||||    
T  50406299 agtgtgtgtttggtatagcggtggcgagaattgattttgataaaattgagtttgaaagatttgattttgattaaaagtgagtt-agatgtgaattgattt 50406201  T
Q  186 gtgtttggat 195  Q
     |||||||||    
T  50406200 ttgtttggat 50406191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 42097 - 41989
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    ||||||||||||||| ||  |||||||  | |||||||| | | || |||||||||| ||||| ||||||| || ||| |||||||||  || |||||||    
T  42097 tttagtgtgtgtttgattctgcggtggagaaaattgattttgataaaattgattttgttagaattgattttagtaaaaggtgagttgaacgtgaattgat 41998  T
Q  184 ttgtgtttg 192  Q
    || ||||||    
T  41997 ttatgtttg 41989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 11023289 - 11023369
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||| |||||||||  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  11023289 tgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 11023369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 47085958 - 47085898
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgttt 191  Q
    |||||||||||||||| |||||||  |||||||||||||||  || ||||||||| |||||    
T  47085958 attgattttgatagaattgattttaattaaaagtgagttgaatgtgaattgatttatgttt 47085898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 12468381 - 12468271
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    ||||||||||||||| |||||| ||  | |||||||| | | |  ||||| ||||||| || ||||||||||||||||||||||    ||||||||||||    
T  12468381 tagtgtgtgtttggtatggcggcgggaagaattgatt-tgatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtaaattgattt 12468283  T
Q  186 gtgtttggatac 197  Q
     | |||||||||    
T  12468282 atatttggatac 12468271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 40229471 - 40229537
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttgtgtttggatac 197  Q
    |||||||||| | ||| |||||||||||||||||||| ||||| || ||||||||| |||||||||||    
T  40229471 attgattttgttggaattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggatac 40229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 40352561 - 40352451
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||||  ||||||   | |||||||| | | |  |||||||||| | ||| |||||||||||||||||||||| |  ||||| |||||    
T  40352561 ttagtgtgtgtttggttgtgcggtgaggagaattgattttgatagaattgattttg-tggaattgattttggttaaaagtgagtttaatgtaaagtgatt 40352463  T
Q  185 tgtgtttggata 196  Q
    | ||||||||||    
T  40352462 tatgtttggata 40352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 5930881 - 5930816
Alignment:
Q  135 attttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||| ||||||| ||||||||||||||||| | ||||  ||||| |||||| ||||||| ||||||    
T  5930881 atttagatagaattgattttggttaaaagtaaattgaatgtaaagtgatttatgtttggttacctt 5930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 29759759 - 29759710
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||||||||||||||||  ||||| |||||| |||||||||||    
T  29759759 tgattatggttaaaagtgagttgaatgtaaaatgatttatgtttggatac 29759710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 25230173 - 25230066
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtg 188  Q
    |||||||||||| || ||||||| | |||||||| | | |  | ||| ||||| |||| ||||||| ||||||||||||||||  || |||||| || ||    
T  25230173 tgtgtgtttggtatgacggtggcgagaattgattttgatagaactgagtttgagagaattgattttagttaaaagtgagttgaatgtgaattga-ttatg 25230075  T
Q  189 tttggatac 197  Q
    |||||||||    
T  25230074 tttggatac 25230066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 40709290 - 40709235
Alignment:
Q  141 atagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||||| |||||||| |||| ||||||||||| || ||||||||| |||||||||||    
T  40709290 atagaattgattttgattaatagtgagttgagtgt-aattgatttatgtttggatac 40709235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 5e-46; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 29682312 - 29682171
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||| |||| |||||||||||||||| ||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||||||| | |||||||||||||    
T  29682312 agtgtatgttgggtttggcggtggctagaatagattctaacaaaattaattttgatagaattgattttggttaaaattgagttgcgtgtaaattgatttg 29682213  T
Q  187 tgtttggatacctttatgcagaaatgattcttattaatttat 228  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  29682212 tgtttggatacttttatgcagaagtgattcttattaatttat 29682171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 228
Target Start/End: Original strand, 16121960 - 16122098
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgt 189  Q
    |||| |||||| ||||||||| ||||||||||| | | || |||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||    
T  16121960 gtgtctttggtatggcggtggttataattgattttgataaaattgattttgatagaattgattttggttaaaagtgatttgagtgtaagttgatttgtgt 16122059  T
Q  190 ttggatacctttatgcagaaatgattcttattaatttat 228  Q
    ||| ||||||||||| | || ||||||||||||||||||    
T  16122060 ttgaatacctttatgtataagtgattcttattaatttat 16122098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 10826235 - 10826127
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    |||||||||||||||||||| ||  | |||| ||| | | || ||||| ||||| |||| ||||||||||||||||||||||||   | ||||||||| |    
T  10826235 gtgtgtgtttggtttggcggcggtgagaattaattttgataaaattgagtttgagagaattgattttggttaaaagtgagttgaatttgaattgattttt 10826136  T
Q  188 gtttggata 196  Q
    |||||||||    
T  10826135 gtttggata 10826127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 6208019 - 6208128
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| | |||||||| |||||||||| | | |  |||||||||||  ||| |||||||| |||||||||||||||  || |||||| ||     
T  6208019 agtgtgtgtttggtatagcggtggcgataattgattttgatagaattgattttgagtgaattgattttgattaaaagtgagttgaatgtgaattga-tta 6208117  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  6208118 tgtttggatac 6208128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 13739350 - 13739268
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  13739350 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 13739268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 13744850 - 13744768
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  13744850 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 13744768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 29409203 - 29409317
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattga 182  Q
    ||||||||||| |||||| || ||||||| | |||||||| ||| |  ||||| ||||| |||| |||||||| |||||||||||||    || ||||||    
T  29409203 atttagtgtgtttttggtatgacggtggcgaaaattgattttaatagaattgagtttgaaagaattgattttgattaaaagtgagtttgatgtgaattga 29409302  T
Q  183 tttgtgtttggatac 197  Q
    ||| |||||||||||    
T  29409303 tttatgtttggatac 29409317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 16442350 - 16442416
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||||||||| |||| ||||||| |||| |||||||||||  || ||||||||| |||||||||||    
T  16442350 attgattttgagagaattgattttagttacaagtgagttgaatgtgaattgatttatgtttggatac 16442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 16548228 - 16548174
Alignment:
Q  143 agaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||| ||||||||||||||||||||||||  || ||||||||| |||||||||||    
T  16548228 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 16548174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 1500056 - 1499984
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatg 204  Q
    |||||||||| || || ||||||||| |||||| |||||||| |||||||||||| |||||| |||| ||||||    
T  1500056 attgattttg-taaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacatttatg 1499984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 3605752 - 3605819
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacct 199  Q
    |||||||||| ||||| |||||||| |||||||||||||||| | ||| |||||| |||||||| ||||    
T  3605752 attgattttg-tagaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggacacct 3605819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 17829998 - 17830058
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgttt 191  Q
    ||||| ||||| |||| ||||||||||||||||||||||||  || ||||||||| |||||    
T  17829998 attgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 17830058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 1312395 - 1312505
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  |||||||  | |||||||| | | |  || || ||||||| || ||||||||||||||||||||||||  |  |||||||||     
T  1312395 agtgtgtgtttggttcagcggtggagaaaattgattttgatagaatcgagtttgataaaattgattttggttaaaagtgagttgaatgcgaattgattta 1312494  T
Q  187 tgtttggatac 197  Q
    |||| ||||||    
T  1312495 tgttcggatac 1312505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 21254831 - 21254944
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattga 182  Q
    |||||||||||||||||||   ||||||  |||||||| | | | |  ||||| ||||| |||| ||| |||| |||||||||||||||  || ||||||    
T  21254831 atttagtgtgtgtttggttccacggtggtgataattgagtttgatagaattgagtttgagagaattgaatttgattaaaagtgagttgaatgt-aattga 21254929  T
Q  183 tttgtgtttggatac 197  Q
    ||| |||||||||||    
T  21254930 tttatgtttggatac 21254944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 15151461 - 15151574
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  ||||||  || |||||||| | | |  ||||| |||||  ||| |||||||||||| |||||||||  || |||| || |||     
T  15151461 agtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagttatgactaaagtggttta 15151560  T
Q  187 tgtttggatacctt 200  Q
    ||||||||||||||    
T  15151561 tgtttggatacctt 15151574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 33898960 - 33899071
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt-gagagtaaattgatt 184  Q
    ||||||||||||||| | |||||||  | |||||||| | | |  ||||| ||||| |||| |||||||| ||||||||||||| || | | ||||||||    
T  33898960 tagtgtgtgtttggtatagcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtttgata-tgaattgatt 33899058  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  33899059 tatgtttggatac 33899071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 26491085 - 26490945
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| |||||||| ||| ||||||||||  ||| |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26491085 gtgtgtgtttggtgtggcggtgactagaattgattctgtcaaaattgattttggtagaattgattttggttaaaagtgagttgagtgtaaattgatttgt 26490986  T
Q  188 gtttggatacctttatgcagaaatgattcttattaatttat 228  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  26490985 gtttggatacctttatatagaagtgattcttattaatttat 26490945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 31246273 - 31246409
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtg 188  Q
    |||||||||||||  |||||||  |||||||||| | |||  |||||||||| ||||| ||||||| ||||||||||||||||  || ||||||||| ||    
T  31246273 tgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatg 31246372  T
Q  189 tttggatacctttatgcagaaatgattcttattaatt 225  Q
    |||||||||||| | ||| || |||||||||| ||||    
T  31246373 tttggataccttaaagcaaaagtgattcttataaatt 31246409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 3467686 - 3467548
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||||  || |||||||||     
T  3467686 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttc 3467587  T
Q  187 tgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    ||||||||||  |||||  | || |||||||||| ||||    
T  3467586 tgtttggatatatttatttaaaagtgattcttatgaatt 3467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 22936747 - 22936859
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||| |||||||||| | |||||||| | | |  ||| | ||||| |||| ||||||||||||||||||||||||  || ||||||||    
T  22936747 ttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattaagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatt 22936846  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  22936847 tatgtttggatac 22936859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 28425426 - 28425538
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgat 183  Q
    |||||||||||||||| || ||||||| | |||||||| | | |  |||||||||| ||||| |||||||||||||||||||| ||||| || |||||||    
T  28425426 ttagtgtgtgtttggtatgacggtggcgaaaattgattttgatagaattgattttgttagaattgattttggttaaaagtgagtttgag-gtgaattgat 28425524  T
Q  184 ttgtgtttggatac 197  Q
    || |||||||||||    
T  28425525 ttatgtttggatac 28425538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 4941739 - 4941846
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttgt 187  Q
    |||||||||||| |||||||||||| |||||||||| | |  ||||| ||||| |||| |||||||| ||||||||||| ||||| || ||||||||| |    
T  4941739 tgtgtgtttggtatggcggtggctagaattgattctgatataattgagtttgagagaattgattttgattaaaagtgagtttgag-gtgaattgatttat 4941837  T
Q  188 gtttggata 196  Q
    |||||||||    
T  4941838 gtttggata 4941846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 30759256 - 30759344
Alignment:
Q  82 catttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttg 170  Q
    ||||||||||||||||||||||||| |||  | |||||||| ||| |  ||||| ||||| |||| |||||||||||||||||||||||    
T  30759256 catttagtgtgtgtttggtttggcgatgggaagaattgattttaatataattgagtttgagagaattgattttggttaaaagtgagttg 30759344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 41289016 - 41289124
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtg 188  Q
    |||| |||||||||||||| ||| | |||||||| | |||  ||||| ||||| |||| |||||||  |||||||||||||||  || ||||||||| ||    
T  41289016 tgtgggtttggtttggcggcggcgagaattgattttgacagaattgagtttgagagaattgattttaattaaaagtgagttgattgtgaattgatttatg 41289115  T
Q  189 tttggatac 197  Q
    |||||||||    
T  41289116 tttggatac 41289124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 19649278 - 19649226
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||||||||||    
T  19649278 tgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 19649226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 22552696 - 22552804
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||| |||||||||  || |||  ||||||||||| | |||  ||||||||| || ||| ||||||||| ||||||||||||||  | ||||||||||     
T  22552696 agtgtatgtttggttatgctgtgagtataattgattttgacataattgattttaattgaattgattttggataaaagtgagttgatggaaaattgattta 22552795  T
Q  187 tgtttggat 195  Q
    |||||||||    
T  22552796 tgtttggat 22552804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 23018205 - 23018111
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    ||||| |||||| ||| |||||||| | ||||||||||||||  |||||| |||| |||||||||||    ||||| || |||||||||||||||    
T  23018205 attgagtttgatcgaattgattttgatcaaaagtgagttgagtataaatttatttatgtttggatacacgaatgcaaaagtgattcttattaatt 23018111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 29970894 - 29970840
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggataccttta 202  Q
    ||||||| |||||||||||||||||  |||| |||||| ||||||||||||||||    
T  29970894 tgattttagttaaaagtgagttgagtttaaagtgatttatgtttggataccttta 29970840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 40742233 - 40742167
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| |||||||||||||||||||||||   || ||||||||| |||||||||||    
T  40742233 attgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 40742167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 41891820 - 41891884
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||||||||| ||||| ||||||| |||| ||||||||||||   |||||||||||||||||||||    
T  41891820 attgattttg-tagaattgattttagttagaagtgagttgagcaaaaattgatttgtgtttggata 41891884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 43550983 - 43550934
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||||||    
T  43550983 tgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 43550934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 440143 - 440255
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    ||||||||||||||||| | ||| ||  |||||||||| | | |  ||||| | ||| |||| |||||||||||||| ||||||||   || ||||||||    
T  440143 ttagtgtgtgtttggttggacggcggagataattgattttgatagaattgagtctgagagaattgattttggttaaatgtgagttggatgtgaattgatt 440242  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  440243 tatgtttggatac 440255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 32597863 - 32597943
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttg 170  Q
    ||||||||||||  |||||||| | |||||| | | | || |||||||||||||||| |||||| ||| ||||||||||||    
T  32597863 gtgtgtttggttatgcggtggcaaaaattgagtttgagaaaattgattttgatagaattgatttcggtcaaaagtgagttg 32597943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 40792188 - 40792244
Alignment:
Q  115 aattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttga 171  Q
    |||||||| ||| || ||||||||||||| || |||||||| |||||||||||||||    
T  40792188 aattgattttaataaaattgattttgatataattgattttgattaaaagtgagttga 40792244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 10552926 - 10552969
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgttt 191  Q
    ||||||||||||||||||||||||  |||||||||||| |||||    
T  10552926 tgattttggttaaaagtgagttgaatgtaaattgatttatgttt 10552969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 196
Target Start/End: Original strand, 42143323 - 42143429
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttgtg 188  Q
    ||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| | || ||||||| |||||||||||| ||||| || ||||||||| ||    
T  42143323 gtgtgtttggtatggcggtggcgagaattgattatgatataattgagtttgagaaaattgattttagttaaaagtgagtttgag-gtgaattgatttatg 42143421  T
Q  189 tttggata 196  Q
    ||||||||    
T  42143422 tttggata 42143429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 3619069 - 3619134
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||||||||||  ||| ||||| || | |||||||||||||| | ||||||||||||||||||||||    
T  3619069 attgattttgaatgaattgattctgatcaaaagtgagttgagtg-aaattgatttgtgtttggatac 3619134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 15206805 - 15206739
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| | || ||||||||| ||||||||||||||  || ||||||||| |||||||||||    
T  15206805 attgagtttgacaaaattgattttgggtaaaagtgagttgaatgtgaattgatttatgtttggatac 15206739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 42149114 - 42149049
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttgtgtttggata 196  Q
    ||||||| ||||| || |||||||||||||||||||| ||||| || ||||||||| ||||||||||    
T  42149114 attgattctgatataattgattttggttaaaagtgagtttgag-gtgaattgatttatgtttggata 42149049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 3465396 - 3465509
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  ||||||  || |||||||| | | |  ||||| |||||  ||| |||||||||||| |||||||||  || |||| || |||     
T  3465396 agtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagttatgactaaagtggttta 3465495  T
Q  187 tgtttggatacctt 200  Q
    ||||||||||||||    
T  3465496 tgtttggatacctt 3465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 27649896 - 27649819
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtga 166  Q
    ||||||||||||| ||||||| | | |||||||| | | |  ||||| ||||| |||| |||||||||||||||||||    
T  27649896 tgtgtgtttggttgggcggtgacgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtga 27649819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 36779499 - 36779435
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||||||||| ||||| |||||||| |||||||||||||||  ||||| | |||| ||||||||||    
T  36779499 attgattttg-tagaattgattttgattaaaagtgagttgaatgtaaagtaatttatgtttggata 36779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 35239607 - 35239567
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttga 171  Q
    ||||||||||||| || ||||||||||||||||||| ||||    
T  35239607 attgattttgataaaattgattttggttaaaagtgaattga 35239567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 45147250 - 45147290
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttga 171  Q
    ||||||||||||||||  || ||||||||||||||||||||    
T  45147250 attgattttgatagaatcgaatttggttaaaagtgagttga 45147290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 42752132 - 42752272
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||||  |||||||  |||||||||| | |||  |||||||||| ||||| ||||||| ||||||||||||||||  || ||||||||    
T  42752132 ttagtgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatt 42752231  T
Q  185 tgtgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    | |||||||||||||| | ||| |||| |||||||| ||||    
T  42752232 tatgtttggataccttaaagcaaaaataattcttataaatt 42752272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 41625500 - 41625597
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttat 228  Q
    ||||||| ||| | || |||||||| |||||||||| ||||| ||||||| |||||||||||||||| |||| | |||| ||||||||||||||||||    
T  41625500 attgattctgacaaaattgattttgattaaaagtgacttgagtgtaaattaatttgtgtttggatacttttaagtagaagtgattcttattaatttat 41625597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 3622401 - 3622513
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||| | |||||||||| | |||||||| | | |  ||||| ||||| |||| |||||||||||||||||||||||   || ||||||||    
T  3622401 ttagtgtgtgtttgttatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatt 3622500  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  3622501 tatgtttggatac 3622513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 225
Target Start/End: Original strand, 39634106 - 39634246
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||||  |||||||  | ||||||||   |||  |||||||||| ||||| ||||||||||||||||||||||||   | ||||||||    
T  39634106 ttagtgtgtgtttggttctgcggtggagagaattgatttggacagaattgattttgttagaattgattttggttaaaagtgagttgaatatgaattgatt 39634205  T
Q  185 tgtgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    | |||||||||| ||| |  || || |||||||||| ||||    
T  39634206 tatgtttggataacttaaaacaaaagtgattcttataaatt 39634246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 34365924 - 34366035
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    ||||||||||||||| |||||||||||| |||||||| | | |  || || ||||| |||| ||||||| ||||||||| ||||| | || |||||||||    
T  34365924 tagtgtgtgtttggtatggcggtggctagaattgattttgatataatggagtttgaaagaattgattttagttaaaagttagttgggtgtgaattgattt 34366023  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  34366024 atgtttggatac 34366035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 41715827 - 41715715
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattg 181  Q
    |||| ||||||||||||| |||||||||| | |||||||| | | |  ||||||||| | |||| |||||||| ||||||||||||| ||| ||||||||    
T  41715827 attttgtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagtt-agatgtaaattg 41715729  T
Q  182 atttgtgtttggat 195  Q
    |||| |||||||||    
T  41715728 atttatgtttggat 41715715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 37562738 - 37562626
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    ||||||||||||||||||||||||||  | |||||||| | | |  ||||| ||| | |||| ||||||| |||||||||||||||   || ||||||||    
T  37562738 ttagtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttaagagaattgatttttgttaaaagtgagttggatgtgaattgatt 37562639  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  37562638 tatgtttggatac 37562626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 39391083 - 39391190
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttgtg 188  Q
    ||||||||||| |||||||||| | |||||||| | | |  |||||||||  ||||| |||||||||||||||||||| ||||| || ||||||||| ||    
T  39391083 gtgtgtttggtatggcggtggcgaaaattgattttgatagaattgatttttttagaattgattttggttaaaagtgagtttgag-gtgaattgatttatg 39391181  T
Q  189 tttggatac 197  Q
    |||||||||    
T  39391182 tttggatac 39391190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 47022082 - 47021975
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgt 189  Q
    ||||||||||| ||  |||||  |||||||||| | | |  ||||| ||||| |||| ||||||||||||||||| |||||| ||| ||||||||| |||    
T  47022082 gtgtgtttggtatgatggtggggataattgattttgatagaattgagtttgagagaattgattttggttaaaagtaagttgaaagtgaattgatttatgt 47021983  T
Q  190 ttggatac 197  Q
    ||||||||    
T  47021982 ttggatac 47021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 48459832 - 48459766
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| ||||||||||||||||||||||||  || ||||||||| |||||||||||    
T  48459832 attgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 48459766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 196
Target Start/End: Original strand, 386428 - 386533
Alignment:
Q  91 tgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtt 190  Q
    |||||||||||||||||||| || |||||||| | | |  ||||| ||||| || | ||||||||||||||||| || |||  || ||||||||| ||||    
T  386428 tgtgtttggtttggcggtggttaaaattgattttgatataattgagtttgagagtattgattttggttaaaagttagctgaatgtgaattgatttatgtt 386527  T
Q  191 tggata 196  Q
    ||||||    
T  386528 tggata 386533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 46541762 - 46541661
Alignment:
Q  91 tgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtt 190  Q
    |||||||||||||||||||| || |||||||| | | |  ||||| ||||| |||| |||||||||||| |||||||||||  || ||||| ||| ||||    
T  46541762 tgtgtttggtttggcggtggttaaaattgattttgatagaattgagtttgagagaattgattttggttagaagtgagttgaatgtgaattggtttatgtt 46541663  T
Q  191 tg 192  Q
    ||    
T  46541662 tg 46541661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 37639597 - 37639489
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    ||||||||||||||| |||||| ||  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||| ||||  || |||||||||    
T  37639597 tagtgtgtgtttggtatggcggcggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgaattgaatgtgaattgattt 37639498  T
Q  186 gtgtttgga 194  Q
     ||||||||    
T  37639497 atgtttgga 37639489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 40903112 - 40903219
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    |||||||||||||||  | ||||| | |||||||| | |||  |||||||||||||||| ||||||||  |||||||||||||| | | ||||| ||| |    
T  40903112 gtgtgtgtttggttttccagtggcgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagttga-acttaattggtttat 40903210  T
Q  188 gtttggata 196  Q
    |||||||||    
T  40903211 gtttggata 40903219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 34010504 - 34010422
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttg 170  Q
    ||||||||||||||| ||||||||| | |||||||| | | |  ||||| ||||| |||| |||||||||||||||||||||||    
T  34010504 agtgtgtgtttggtt-ggcggtggcgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttg 34010422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 43631642 - 43631721
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    ||||||||||| |||||||||  |||||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  43631642 gtgtgtttggtatggcggtggggataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 43631721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 3375612 - 3375546
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| | ||||||||||||||||||||  | || |||||||||||||||||||||    
T  3375612 attgagtttgagagaattaattttggttaaaagtgagtttggtgtgaattgatttgtgtttggatac 3375546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 3750808 - 3750742
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| |||||||||||||||||||||||   || ||||||||| |||||||||||    
T  3750808 attgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 3750742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 10371945 - 10372007
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttgg 193  Q
    ||||| ||||| |||| ||||||||||||||||||||||||  || ||||||||| |||||||    
T  10371945 attgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttgg 10372007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 20088974 - 20088920
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggataccttta 202  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||||    
T  20088974 tgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttaccttta 20088920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 38230178 - 38230124
Alignment:
Q  143 agaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||| ||||||||||||||||||||||||  || ||||||||| |||||||||||    
T  38230178 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 38230124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 44967386 - 44967452
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| ||||||||||||||||||||||||  || ||||||||| |||||| ||||    
T  44967386 attgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttgaatac 44967452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 1766547 - 1766478
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    ||||||||||||  || |||||||| |||||||||||||||   ||||||||||| | ||||||||||||    
T  1766547 attgattttgattaaattgattttgattaaaagtgagttgaacctaaattgatttatatttggatacctt 1766478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 39977719 - 39977636
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    ||||||||||||||| |||||||||| |||||||||| | | |  ||| | ||||| |||| ||||||| || |||||||||||    
T  39977719 tagtgtgtgtttggtatggcggtggcgataattgattttgatagaatttagtttgaaagaattgattttagtcaaaagtgagtt 39977636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 4228652 - 4228598
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggataccttta 202  Q
    |||||||| |||||||||||||||  | ||| |||||| ||||||||||||||||    
T  4228652 tgattttgattaaaagtgagttgaatgaaaagtgatttatgtttggataccttta 4228598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 45557522 - 45557456
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||||||||||  ||| ||||| ||  ||||||||||||||  ||||| ||||||||||||||||||    
T  45557522 attgattttgaatgaattgattctgactaaaagtgagttgaaggtaaagtgatttgtgtttggatac 45557456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 32187106 - 32186998
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgattt 185  Q
    ||||| |||||||| || ||||||| | |||||||| | | |  ||| ||||| | |||| |||||||| ||||||||||||| ||| ||||||||||||    
T  32187106 agtgtatgtttggtatgacggtggcgagaattgattttgatagaattaattttaagagaattgattttgattaaaagtgagtt-agatgtaaattgattt 32187008  T
Q  186 gtgtttggat 195  Q
     |||||||||    
T  32187007 atgtttggat 32186998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 38494338 - 38494269
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||| | ||| ||||||||||||||||||||||||  || || || ||| ||||||| ||||||    
T  38494338 attgattttgtttgaattgattttggttaaaagtgagttgaatgtgaagtggtttatgtttggttacctt 38494269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 42740514 - 42740449
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    ||||| ||||| |||| ||||||||||||||||| ||||||  || ||||||||| ||||| ||||    
T  42740514 attgagtttgagagaattgattttggttaaaagtaagttgaatgttaattgatttatgtttagata 42740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 2839412 - 2839349
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggat 195  Q
    ||||||||||||||||  ||||||  | ||||||||||||| | ||||||||||| |||||||||    
T  2839412 attgattttgatagaatagatttttatgaaaagtgagttga-actaaattgatttatgtttggat 2839349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 16079524 - 16079460
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggat 195  Q
    |||||||||  ||||| ||||||||||| ||||||||||||  | ||| |||||| |||||||||    
T  16079524 attgattttagtagaattgattttggtttaaagtgagttgaatgaaaagtgatttatgtttggat 16079460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 36920165 - 36920236
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgatttgtgtttggataccttta 202  Q
    ||||| ||||| |||| |||||||||||||||||||||| |||  ||||||||||| |||||| |||| ||||    
T  36920165 attgagtttgaaagaattgattttggttaaaagtgagtt-agatataaattgatttatgtttgaatacgttta 36920236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 54488735 - 54488597
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  |||||||  |||||||||| | |||  |||||||||| ||||| ||||||| ||||||||||||||||  || |||||||||     
T  54488735 agtgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgattta 54488636  T
Q  187 tgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    |||||| ||||||| | ||| || |||||||||| ||||    
T  54488635 tgtttgaataccttaaagcaaaagtgattcttataaatt 54488597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 26824220 - 26824315
Alignment:
Q  133 tgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttat 228  Q
    |||||||||||||| ||||||||||||||| | | ||||| |||||||||||| | ||| ||||| |||||| |||| ||||||||||||||||||    
T  26824220 tgattttgatagaattgattttggttaaaaataaattgagtgtaaattgatttatatttagatacttttatgtagaagtgattcttattaatttat 26824315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 38306141 - 38306003
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||   ||||||  |||||||||| | |||  |||||||||| ||||| ||||||| ||||||||||||||||  |  |||||||||     
T  38306141 agtgtgtgtttggttctacggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgcgaattgattta 38306042  T
Q  187 tgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    |||||||||||||| | ||| || |||||||||| ||||    
T  38306041 tgtttggataccttaaagcaaaagtgattcttataaatt 38306003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 39187867 - 39187754
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    |||||||||||||||||||||||||||  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||| | ||||  || |||||||    
T  39187867 tttagtgtgtgtttggtttggcggtggagagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtaatttgaatgtgaattgat 39187768  T
Q  184 ttgtgtttggatac 197  Q
    || |||||||||||    
T  39187767 ttatgtttggatac 39187754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 41866285 - 41866176
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    |||||||||||||||||||||||||| |||||||||| | | || ||||| |||||  ||| ||| ||| |||||||||||||||   || |||||||||    
T  41866285 tagtgtgtgtttggtttggcggtggcgataattgattttgataaaattgagtttgagggaattgagtttagttaaaagtgagttggatgtgaattgattt 41866186  T
Q  186 gtgtttggat 195  Q
     |||||||||    
T  41866185 atgtttggat 41866176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 43772077 - 43772189
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||||||| |||| | |||||||||| | | |  ||||| ||||| |||| |||||||||||||||||||||||   || ||| ||||    
T  43772077 ttagtgtgtgtttggtttggtggtgacgataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaatcgatt 43772176  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  43772177 tatgtttggatac 43772189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 54150661 - 54150546
Alignment:
Q  82 catttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaatt 180  Q
    ||||||||||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| |||||||| ||||||||||||| ||| || ||||    
T  54150661 catttagtgtgtgtttggtatggcggtggcaagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt-agatgtgaatt 54150563  T
Q  181 gatttgtgtttggatac 197  Q
    ||||| |||||||||||    
T  54150562 gatttttgtttggatac 54150546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 6138577 - 6138686
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    |||||||||||||||||||||||  | |||||||| | | |  ||||| ||||| | || |||||||||||||||||||||||   || ||||||||| |    
T  6138577 gtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttgaaataattgattttggttaaaagtgagttggatgtgaattgatttat 6138676  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  6138677 gtttggatac 6138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 22699828 - 22699759
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||| ||||| ||||||||||||||||| ||||||  ||||| |||||| ||||||||||||||    
T  22699828 attgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggatacctt 22699759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 22980702 - 22980771
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||| ||||| ||||||||||||||||| ||||||  ||||| |||||| ||||||||||||||    
T  22980702 attgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggatacctt 22980771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 22994289 - 22994358
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||| ||||| ||||||||||||||||| ||||||  ||||| |||||| ||||||||||||||    
T  22994289 attgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggatacctt 22994358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 46958109 - 46958040
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||| | |||| ||||||| ||||||    
T  46958109 attgattttgatagaattgattttggttaaaagtgagttgaacgtaaagtaatttatgtttggttacctt 46958040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 48550347 - 48550239
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgattt 185  Q
    |||||||||||||| |||||||||| | |||||||| | | |  ||||||||| | |||| |||||||| ||||||||||||| ||| ||||||||||||    
T  48550347 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagtt-agatgtaaattgattt 48550249  T
Q  186 gtgtttggat 195  Q
     |||||||||    
T  48550248 atgtttggat 48550239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 48550427 - 48550492
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||||||||||||||| |||||||||||||||||||||||   || ||||||||| ||||||||||    
T  48550427 attgattttgatagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 48550492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 48908402 - 48908321
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||||||||||| ||  | |||||||| ||| | |||||| ||||| |||| ||||||||||||||||||||||    
T  48908402 gtgtgtgtttggtttggcggcggtgaaaattgattttaatattattgagtttgagagaattgattttggttaaaagtgagtt 48908321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 13167655 - 13167545
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| ||||||| |  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||||  || |||||||||     
T  13167655 agtgtgtgtttggtatggcggtaggaaaaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 13167556  T
Q  187 tgtttggatac 197  Q
    | |||||||||    
T  13167555 tatttggatac 13167545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 16566391 - 16566325
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| ||||||||||||||||||||||||  || ||||||||| |||||||||||    
T  16566391 attgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 16566325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 19592187 - 19592297
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||| | |||||||||  | |||||||| | | |  ||||| ||| | |||| |||||||||||||||||||||||  ||| |||||||||     
T  19592187 agtgtgtgtttgatatggcggtggggagaattgattttgatagaattgagttttagagaattgattttggttaaaagtgagttggaagtgaattgattta 19592286  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  19592287 tgtttggatac 19592297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 46830025 - 46830135
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||| | |||||||| | | |  ||||| ||| |  ||| |||||||||||||||||||||||   || |||||||||     
T  46830025 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtgagttggatgtgaattgattta 46830124  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  46830125 tgtttggatac 46830135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 14072631 - 14072523
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| |||||||||  | |||||||| | | |  ||||| ||||| |||| |||||||| |||||||||||||||  ||||||||| || |    
T  14072631 gtgtgtgtttggtatggcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgtttaaaagtgagttgaaggtaaattga-ttat 14072533  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  14072532 gtttggatac 14072523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 26651805 - 26651914
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| |||||| ||| | |||||||| | | |  ||| | ||||| |||| ||||||||||||||||||||||||  || ||||||||| |    
T  26651805 gtgtgtgtttggtatggcggcggcgagaattgattttgatagaattaagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttat 26651904  T
Q  188 gtttggatac 197  Q
    |||| |||||    
T  26651905 gtttagatac 26651914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 36150690 - 36150625
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    ||||||||||||| || |||||||| |||||||||||||||  ||||| |||||| ||||||||||    
T  36150690 attgattttgatataattgattttgattaaaagtgagttgaatgtaaagtgatttatgtttggata 36150625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 42944898 - 42944963
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    ||||||||||| |||| ||||||||||||||||||||||||  || ||||||||| ||||| ||||    
T  42944898 attgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttagata 42944963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 51923073 - 51922960
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    ||||||||||||||||| |||||| | | | |||||||| |   |  ||||| ||||| |||| ||||||||||||||||||||||||   | |||||||    
T  51923073 tttagtgtgtgtttggtatggcggcgacgagaattgattttgttagaattgagtttgagagaattgattttggttaaaagtgagttgaatctgaattgat 51922974  T
Q  184 ttgtgtttggatac 197  Q
    || |||||||||||    
T  51922973 ttatgtttggatac 51922960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 54153170 - 54153077
Alignment:
Q  91 tgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||| | |||||||| |||||||||| ||| |  ||||| |||||  ||| ||||||||||||||||||||||||  || ||||||||    
T  54153170 tgtgtttggtatagcggtggcgataattgattttaatataattgagtttgagtgaattgattttggttaaaagtgagttgaatgtgaattgatt 54153077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 5025658 - 5025547
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  |||||| ||| |||||||| | |    |||||||||| ||||| ||||||| |||| ||||||||||||   ||||||||||     
T  5025658 agtgtgtgtttggttatgcggtgactaaaattgattttgattgaattgattttg-tagaattgattttagttagaagtgagttgagcaaaaattgattta 5025560  T
Q  187 tgtttggatacct 199  Q
    |||||||||||||    
T  5025559 tgtttggatacct 5025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 28987150 - 28987066
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||||||| |||||||||  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  28987150 ttagtgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 28987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 32238015 - 32238099
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttga 171  Q
    |||||||||||||| | |||||||| |||||||||| | | |  ||||| |||||  ||| ||||||||||||||||||||||||    
T  32238015 agtgtgtgtttggtatagcggtggcgataattgattttgatagaattgagtttgagtgaattgattttggttaaaagtgagttga 32238099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 39636913 - 39636805
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtg 188  Q
    |||||||||||| || ||||||| | |||||||| | | |  ||||| ||||| |||| |||||||| ||||||||||||||   || ||||||||| ||    
T  39636913 tgtgtgtttggtatgacggtggcgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttggatgtgaattgatttatg 39636814  T
Q  189 tttggatac 197  Q
    |||||||||    
T  39636813 tttggatac 39636805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 43781477 - 43781557
Alignment:
Q  89 tgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  43781477 tgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 43781557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 14564100 - 14564215
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    ||||||||||||||||| ||||| ||  | |||||||| | | |  ||||| ||||| |||| |||||||||||||| ||||||||    | ||||||||    
T  14564100 ttagtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttggatatgaattgatt 14564199  T
Q  185 tgtgtttggatacctt 200  Q
    | ||||||||||||||    
T  14564200 tatgtttggatacctt 14564215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 25312844 - 25312735
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgatttg 186  Q
    |||||||||||||||||||||  | | |||||||| | | |  ||||| ||||| |||| |||||||| ||||||||||||| ||| || |||||||||     
T  25312844 gtgtgtgtttggtttggcggtaacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt-agatgtgaattgatttt 25312746  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  25312745 tgtttggatac 25312735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 26824140 - 26824202
Alignment:
Q  84 tttagtgtgt-gtttggtttggcggtggctataattgattctaacaatattgattttgataga 145  Q
    |||||||||| ||||||| ||||||||||||||||| ||||| | || |||||||||||||||    
T  26824140 tttagtgtgttgtttggtgtggcggtggctataattaattctgataaaattgattttgataga 26824202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 54487220 - 54487286
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| |||||||||| |||||| | | |||||||||||||  |||||||||||| |||||||||||    
T  54487220 attgagtttgatagaattgatttcgatcaaaagtgagttgaatgtaaattgatttatgtttggatac 54487286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 28947766 - 28947818
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||    
T  28947766 tgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttacctt 28947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 29149261 - 29149373
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    ||||||||| |||||| | |||||||  | |||||||| | | |  ||||| ||||| |||| |||||||| | |||||||||||||  || ||||||||    
T  29149261 ttagtgtgtatttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatt 29149360  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  29149361 tatgtttggatac 29149373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 4954051 - 4954118
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacc 198  Q
    ||||||||||| |||| ||||||||||||||||||||||    || ||||||||| ||||||| ||||    
T  4954051 attgattttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttatgtttgggtacc 4954118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 55638718 - 55638821
Alignment:
Q  94 gtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttgg 193  Q
    ||||||||||| || ||| | |||||||| | | |  ||||| ||||| |||| ||||||| |||||||||||||| |  |||||||||||| ||||| |    
T  55638718 gtttggtttggtggcggcgagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtgagttaaatgtaaattgatttatgtttag 55638817  T
Q  194 atac 197  Q
    ||||    
T  55638818 atac 55638821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 49519816 - 49519750
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| |||||||||||||||||||||||   || |||| |||| |||||||||||    
T  49519816 attgagtttgagagaattgattttggttaaaagtgagttggatgtgaatttatttatgtttggatac 49519750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 6505334 - 6505249
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||||||| ||||||| | | |||||||| | | | |  ||||| ||||| |||| ||||||||||||||| ||||||    
T  6505334 tttagtgtgtgtttggattggcggcgtcgataattgactttgatagaattgagtttgagagaattgattttggttaaaaatgagtt 6505249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 28752600 - 28752532
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    ||||||||||   ||| |||||||||||||||||||||||| | ||| ||||||| ||||||||| ||||    
T  28752600 attgattttgtctgaattgattttggttaaaagtgagttgaca-taatttgatttatgtttggatgcctt 28752532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 33574264 - 33574203
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttg 192  Q
    ||||| ||||| |||| | ||||||||||||||||||||||  || ||||||||| ||||||    
T  33574264 attgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttg 33574203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 33843868 - 33843803
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||||||||||| ||| ||||| ||| |||||||||||||   ||||| |||||| ||||||||||    
T  33843868 attgattttgattgaattgattctggctaaaagtgagttggatgtaaagtgatttatgtttggata 33843803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 53532109 - 53532024
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttg 170  Q
    ||||| ||||||||||| ||||||||  | |||||||| | | || ||||| ||||| | || ||||||| |||||||||||||||    
T  53532109 ttagtatgtgtttggttcggcggtggtgagaattgattttgataaaattgagtttgacataattgattttagttaaaagtgagttg 53532024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 53939482 - 53939523
Alignment:
Q  150 attttggttaaaagtgagttgagagtaaattgatttgtgttt 191  Q
    ||||| ||||||||||||||||||||||||| |||| |||||    
T  53939482 attttagttaaaagtgagttgagagtaaattaatttatgttt 53939523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 20677133 - 20677069
Alignment:
Q  133 tgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||||||||| ||| |||||||| | |||||||| || || ||||| |||||| |||||||||||    
T  20677133 tgattttgattgaattgattttgatcaaaagtgaatttagtgtaaagtgatttatgtttggatac 20677069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 40286358 - 40286302
Alignment:
Q  141 atagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    |||||| |||||||| |||||| ||||||||| | ||| |||||| |||||||||||    
T  40286358 atagaattgattttgattaaaattgagttgagtgaaaaatgatttatgtttggatac 40286302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 50664905 - 50664793
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||| |||||||||| | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||||  || ||||||||    
T  50664905 ttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatt 50664806  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  50664805 tatgtttggatac 50664793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 49526669 - 49526766
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatttat 228  Q
    |||||||||||||||| |||||||| |||||||||| ||||  |||||||||||| ||||||||||| || ||| | || |||||||||| |||||||    
T  49526669 attgattttgatagaattgattttgattaaaagtgaattgattgtaaattgatttatgtttggatacattcatgtaaaattgattcttatcaatttat 49526766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 15511332 - 15511442
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||| |||||||||| | | |  |  || ||||| |||| ||||||||||||||||||||||| | || |||||||||     
T  15511332 agtgtgtgtttggtatggcggtggcgataattgattttgatagaacggagtttgaaagaattgattttggttaaaagtgagttgggtgtgaattgattta 15511431  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  15511432 tgtttggatac 15511442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 38172263 - 38172373
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||||||||||||||||||||||  | |||||||| ||| |  ||||| ||||| |||| ||||||||||||||||||||| |   || |||||||||     
T  38172263 agtgtgtgtttggtttggcggtggggagaattgattttaatagaattgagtttgagagaattgattttggttaaaagtgagtgggatgtgaattgattta 38172362  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  38172363 tgtttggatac 38172373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 48189398 - 48189507
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    ||||||||||||||  ||||||||| |||||||||| | | |  ||||| ||||| |||| |||||||| |||||||||||||||  ||||||||| ||     
T  48189398 agtgtgtgtttggtagggcggtggcgataattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaaattga-tta 48189496  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  48189497 tgtttggatac 48189507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 7012737 - 7012672
Alignment:
Q  135 attttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||| ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||||||||    
T  7012737 attttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatacctt 7012672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 23496464 - 23496352
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||| |||||| |   | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||||  || ||||||||    
T  23496464 ttagtgtgtgtttggtatggcggcgaggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatt 23496365  T
Q  185 tgtgtttggatac 197  Q
    | |||||||||||    
T  23496364 tatgtttggatac 23496352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 4984729 - 4984616
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattga 182  Q
    ||||||||||||||||| |||||||||  | |||||||| | | |  ||||| ||||| | || |||||||||||||||||||||| ||| || ||||||    
T  4984729 tttagtgtgtgtttggtatggcggtggggagaattgattttgatataattgaatttgagaaaattgattttggttaaaagtgagtt-agatgtgaattga 4984631  T
Q  183 tttgtgtttggatac 197  Q
    ||| |||||||||||    
T  4984630 tttatgtttggatac 4984616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 31084308 - 31084242
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||||||||| |||| |||||||| |||||||||||||||  || ||||||||| |||||||||||    
T  31084308 attgattttgaaagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggatac 31084242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 10334286 - 10334173
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgat 183  Q
    ||||||||||||||| | |||||||| | | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||| ||||||   | |||||||    
T  10334286 tttagtgtgtgtttgatatggcggtgacgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtcagttgaatatgaattgat 10334187  T
Q  184 ttgtgtttggatac 197  Q
    || |||||||||||    
T  10334186 ttatgtttggatac 10334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 14651086 - 14651166
Alignment:
Q  115 aattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    |||||||| ||| || |||||||||||||||| |||||||| ||||||||||||||| |   ||||||||||||||| ||||    
T  14651086 aattgattttaataaaattgattttgatagaattgattttgattaaaagtgagttga-atataattgatttgtgttttgata 14651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 10852713 - 10852781
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacct 199  Q
    |||||||||| || || ||||||||||||||||||||||||  ||||| |||||| ||||||| |||||    
T  10852713 attgattttggtataattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggctacct 10852781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 10853224 - 10853332
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| | |||||||  | |||||||| | | |  ||||| ||||| |||| |||||||||||||||||||||| |   ||||||||||| |    
T  10853224 gtgtgtgtttggtatagcggtggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttaatataaattgatttat 10853323  T
Q  188 gtttggata 196  Q
    |||||||||    
T  10853324 gtttggata 10853332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 52966764 - 52966844
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtga 166  Q
    ||||||||||||||||||| |||||  | |||||||| | | |  ||||||||||| |||| |||||||||||||||||||    
T  52966764 tagtgtgtgtttggtttggaggtggagaaaattgattttgatagaattgattttgagagaattgattttggttaaaagtga 52966844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 23918939 - 23918872
Alignment:
Q  135 attttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggataccttta 202  Q
    |||||| ||||| | ||||||||||||||||||||||  ||||| |||||| ||||||| ||||||||    
T  23918939 attttggtagaattaattttggttaaaagtgagttgaatgtaaagtgatttatgtttggttaccttta 23918872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 44225709 - 44225599
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||||  | |||||  | |||||||| ||| |  |||||||||| ||||| ||||||| |||||||||||||| |  ||||| ||||||     
T  44225709 agtgtgtgtttggttgtgtggtggagaaaattgattttaatataattgattttg-tagaattgattttcgttaaaagtgagtttaatgtaaagtgattta 44225611  T
Q  187 tgtttggatacc 198  Q
    ||||||||||||    
T  44225610 tgtttggatacc 44225599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 44939369 - 44939456
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttga 171  Q
    ||||||||||||||||| | |||||||| |||||||||| | | |  ||||| |||||  ||| |||||||| |||||||||||||||    
T  44939369 tttagtgtgtgtttggtatagcggtggcgataattgattttgatagaattgaatttgagtgaattgattttgattaaaagtgagttga 44939456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 16246048 - 16246157
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattg 181  Q
    ||||| |||||||||||||||||||| || | |||||||  ||| |  ||||| ||||  |||| ||||||| |||||||||||||| ||| ||||||||    
T  16246048 atttactgtgtgtttggtttggcggtagcgagaattgatattaatagaattgagtttg--agaattgattttagttaaaagtgagtt-agatgtaaattg 16246144  T
Q  182 atttgtgtttgga 194  Q
    |||| ||||||||    
T  16246145 atttatgtttgga 16246157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 19877518 - 19877453
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    ||||| ||||| |||| |||||||||||||||||||||||   |||||||||||| ||||| ||||    
T  19877518 attgagtttgaaagaattgattttggttaaaagtgagttggatgtaaattgatttatgtttagata 19877453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 26519808 - 26519699
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||| | |||||||  | |||||||| | | |  ||||| ||||| |||| |||||||| | |||||||||||||  || ||||||||| |    
T  26519808 gtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttat 26519709  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  26519708 gtttggatac 26519699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 41459316 - 41459247
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||||||||||| ||| ||| ||||||||||||||| ||||   ||||||||||| |||||| |||||||    
T  41459316 attgattttgattgaattgactttggttaaaagtgatttgaagataaattgatttatgtttgaatacctt 41459247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 42318473 - 42318392
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    ||||||||||||| | |||||| | |||||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||    
T  42318473 gtgtgtgtttggtatagcggtgacgataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 42318392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 52931589 - 52931638
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||||| |||||||||||||| || |||||||||||| |||||||||||    
T  52931589 tgattttagttaaaagtgagtttagtgtaaattgatttatgtttggatac 52931638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 55154646 - 55154549
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||| |||| ||||| | |||||||| | | |  ||||| ||||| |||| ||||||| ||||||||||||||||  || ||||||||    
T  55154646 agtgtgtgtttggtatggcagtggcgagaattgattttgatagaattgagtttgagagaattgattttagttaaaagtgagttgaatgtgaattgatt 55154549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 32932066 - 32932185
Alignment:
Q  83 atttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattga 182  Q
    |||||||||||||||||||  || || | |||||||||||||||    ||||||||||  |||| |||||||   ||||||  |||| || |||||||||    
T  32932066 atttagtgtgtgtttggttatgctgtagttataattgattctaattgaattgattttg-cagaattgattttacataaaagcaagttcagtgtaaattga 32932164  T
Q  183 tttgtgtttggatacctttat 203  Q
    ||| |||||| ||||||||||    
T  32932165 tttatgtttgaatacctttat 32932185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 34561203 - 34561143
Alignment:
Q  137 tttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||||| || ||||||||||||||||||||||||  |  ||||||||| |||||||||||    
T  34561203 tttgataaaattgattttggttaaaagtgagttgaatgcgaattgatttatgtttggatac 34561143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 42475855 - 42475744
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgaga-gtaaattgatt 184  Q
    ||||||| |||||||||||||||| | | |||||||| | | |  ||||| ||||| |||| |||||||| ||||||||||||| ||| || ||||||||    
T  42475855 tagtgtgcgtttggtttggcggtgacgagaattgatttttatagaattgagtttgagagaattgattttgattaaaagtgagtt-agatgtgaattgatt 42475757  T
Q  185 tgtgtttggatac 197  Q
    | |||||| ||||    
T  42475756 tttgtttgaatac 42475744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 3348389 - 3348278
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    ||||||||||||||  | |||||||| | |||||||| | | |  ||||| ||| |  ||| |||||||||||| ||||||||||   ||||||||||||    
T  3348389 tagtgtgtgtttggcatagcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttagaagtgagttggatgtaaattgattt 3348290  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  3348289 atgtttggatac 3348278  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 30811487 - 30811597
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    |||||||||||||||  ||||||| | | |||||||| | | |  ||||| ||||| |||| |||||||| |||||||||||||||  || |||||| ||    
T  30811487 tagtgtgtgtttggtagggcggtgacgagaattgattttgatataattgaatttgagagaattgattttgattaaaagtgagttgaatgtgaattga-tt 30811585  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  30811586 atgtttggatac 30811597  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 38340900 - 38340841
Alignment:
Q  137 tttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    ||||| |||| |||||||||||||||||||||||   || ||||||||| ||||||||||    
T  38340900 tttgaaagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggata 38340841  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 52813362 - 52813247
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    |||||||||||||||||  ||||||  || |||||||| | | |  ||||| |||||  ||| |||||||||||| |||||||||  || |||| || ||    
T  52813362 ttagtgtgtgtttggttctgcggtgagtaaaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagttatgactaaagtggtt 52813263  T
Q  185 tgtgtttggatacctt 200  Q
    | ||||||||||||||    
T  52813262 tatgtttggatacctt 52813247  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 8424730 - 8424795
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| ||||||||||||||||||||||||  || |||||| || |||||||||||    
T  8424730 attgagtttgagagaattgattttggttaaaagtgagttgaacgtgaattga-ttatgtttggatac 8424795  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 21225091 - 21225025
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||| |||| ||||||||||||||||||||||    |||||||||| | |||||||||||    
T  21225091 attgagtttgagagaattgattttggttaaaagtgagtttgatgtaaattgatatatgtttggatac 21225025  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 25181351 - 25181242
Alignment:
Q  90 gtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgt 189  Q
    ||||||||||||  |||||||||| |||||||  | |    |||||||||| ||||| |||||||| ||||||||||||| |  ||||| | |||| |||    
T  25181351 gtgtgtttggttatgcggtggctagaattgatattgattgaattgattttg-tagaattgattttgattaaaagtgagtttaatgtaaaattatttatgt 25181253  T
Q  190 ttggatacctt 200  Q
    |||||||||||    
T  25181252 ttggatacctt 25181242  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 38125398 - 38125476
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtg 165  Q
    |||||||||||||| |||||||| | | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||    
T  38125398 agtgtgtgtttggtatggcggtgacgagaattgattttgatagaattgaatttgagagaattgattttggttaaaagtg 38125476  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 53179949 - 53179883
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||| ||| || ||||||||||||||||||||||    |||||||||||| |||||||||||    
T  53179949 attgagttttatataattgattttggttaaaagtgagtttgatgtaaattgatttatgtttggatac 53179883  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 29252125 - 29252186
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttg 192  Q
    |||||||||||| ||| |||||||| | ||||||||||| |  |||||||||||| ||||||    
T  29252125 attgattttgattgaattgattttgatcaaaagtgagttaattgtaaattgatttatgtttg 29252186  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 42644346 - 42644298
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggata 196  Q
    ||||||| ||||||||||||||||  ||||| |||||| ||||||||||    
T  42644346 tgattttagttaaaagtgagttgaatgtaaagtgatttatgtttggata 42644298  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 43087499 - 43087539
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattcta 125  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  43087499 ttagtgtgtgtttggttatgcggtggttataattgattcta 43087539  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 53568016 - 53567960
Alignment:
Q  148 tgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatg 204  Q
    |||||||| |||||||||||||||  | ||| | |||| ||||||||||||||||||    
T  53568016 tgattttgattaaaagtgagttgaatgaaaagtaatttatgtttggatacctttatg 53567960  T

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Target: scaffold0369 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 8594 - 8484
Alignment:
Q  87 agtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttg 186  Q
    |||||||||||||| |||||||||  |||||||||| | | |  ||||| ||||||| || ||||||||||||||||||||||    || |||||||||     
T  8594 agtgtgtgtttggtatggcggtgggaataattgattttgatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtgaattgattta 8495  T
Q  187 tgtttggatac 197  Q
    |||||||||||    
T  8494 tgtttggatac 8484  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 301626 - 301532
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctttatgcagaaatgattcttattaatt 225  Q
    ||||| |||||| ||| |||||||||| ||||||||||||||  |||||| |||| ||||||||| |  | ||||| ||||||||||| ||||||    
T  301626 attgagtttgatcgaattgattttggtcaaaagtgagttgagtataaatttatttatgtttggattcagtaatgcaaaaatgattcttgttaatt 301532  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 29080 - 29188
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    ||||||||||||||||| |||||  |||||||||| | | |  ||| | ||||| |||| ||||||||||||||||||||||||  || |||||| || |    
T  29080 gtgtgtgtttggtttggtggtggtaataattgattttgatagaattaagtttgaaagaattgattttggttaaaagtgagttgaatgtgaattga-ttat 29178  T
Q  188 gtttggatac 197  Q
    ||||||||||    
T  29179 gtttggatac 29188  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 46906 - 46799
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgt 187  Q
    |||||||||||||||  | ||||| | |||||||| | |||  |||||||||||||||| ||||||||  |||||||||||||| | | ||||| ||| |    
T  46906 gtgtgtgtttggttttccagtggcgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagttga-acttaattggtttat 46808  T
Q  188 gtttggata 196  Q
    |||||||||    
T  46807 gtttggata 46799  T

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Target: scaffold0983 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 2225 - 2331
Alignment:
Q  88 gtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgag-ttgagagtaaattgatttg 186  Q
    |||| |||||||| |||||||||| | |||||||| | |||  ||||| ||||| | || |||||||||||||||||||| ||||| || |||||||||     
T  2225 gtgtctgtttggtatggcggtggcgaaaattgattttgacagaattgagtttgacataattgattttggttaaaagtgagtttgag-gtgaattgattta 2323  T
Q  187 tgtttgga 194  Q
    ||||||||    
T  2324 tgtttgga 2331  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 253275 - 253160
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatt 184  Q
    ||||||||||||||||| ||||| ||  | |||||||| | | |  ||||| ||||| |||| |||||||||||||| ||||||||    | ||||||||    
T  253275 ttagtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttggatatgaattgatt 253176  T
Q  185 tgtgtttggatacctt 200  Q
    | ||||||||||||||    
T  253175 tatgtttggatacctt 253160  T

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Target: scaffold0217 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 1980 - 2065
Alignment:
Q  84 tttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagtt 169  Q
    |||||||||||||||| ||||||||| | |||||||||| | | |  ||||| ||||| |||| ||||||||||| ||| ||||||    
T  1980 tttagtgtgtgtttggattggcggtgtcgataattgattttgatagaattgagtttgaaagaattgattttggttcaaaatgagtt 2065  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 199381 - 199438
Alignment:
Q  143 agaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatacctt 200  Q
    |||| ||||||||||||||||||||||||  ||||| |||||| ||||||| ||||||    
T  199381 agaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttggttacctt 199438  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 15213 - 15323
Alignment:
Q  86 tagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttgagagtaaattgattt 185  Q
    ||||||||||||||||  |||||| | | |||||||| | | |  ||||||||||  | || ||||||||||||||||||||||||   |||| ||||||    
T  15213 tagtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtca-aattgattttggttaaaagtgagttgaatataaagtgattt 15311  T
Q  186 gtgtttggatac 197  Q
     |||||||||||    
T  15312 atgtttggatac 15323  T

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Target: scaffold0394 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 5784 - 5870
Alignment:
Q  85 ttagtgtgtgtttggtttggcggtggctataattgattctaacaatattgattttgatagaactgattttggttaaaagtgagttga 171  Q
    |||||||||||||||| ||| ||| |  | |||||||| | | |  ||||| ||||| |||| ||||||||||||||||||||||||    
T  5784 ttagtgtgtgtttggtatggtggtagggagaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttga 5870  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 118410 - 118476
Alignment:
Q  131 attgattttgatagaactgattttggttaaaagtgagttgagagtaaattgatttgtgtttggatac 197  Q
    ||||| ||||||||||  |||||| ||||||||||||||    |||||||||||| |||||||||||    
T  118410 attgagtttgatagaatagatttttgttaaaagtgagtttgatgtaaattgatttatgtttggatac 118476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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