View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15649_low_7 (Length: 386)
Name: NF15649_low_7
Description: NF15649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15649_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 79 - 370
Target Start/End: Complemental strand, 44766411 - 44766120
Alignment:
| Q |
79 |
agatatggaactggaggaagaaaatgaagttgtagagagtgctaaaggaaagaatagtaataaggttgagccgaaaaagcggaaactaggcggaggagca |
178 |
Q |
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| T |
44766411 |
agatatggaactggaggaagaaaatgaagttgtagagagtgctaaaggaaagaatagtaataaggttgagccgaaaaagcggaaactaggcggaggagca |
44766312 |
T |
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| Q |
179 |
aaaatggagccgatgaaaaagagcaagagtggaaatgaagttaacagggtagctgttaagctctcaccattggcgcctttgaataatttggagggtgagt |
278 |
Q |
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| T |
44766311 |
aaaatggagccgatgaaaaagagcaagagtggaaatgaagttaacagggtagctgttaagctctcaccattggcgcctttgaataatttggagggtgagt |
44766212 |
T |
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| Q |
279 |
gaccaagttaatccaccctcaatccttgttttaatgtattgagaattgagattaattttgtttctgtcatttacacctttttatagaatatt |
370 |
Q |
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| T |
44766211 |
gaccaagttaatccaccctcaatccttgttttaatgtattgagaattgagattaattttgtttctgtcatttacacctttttatagaatatt |
44766120 |
T |
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