View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15653_high_7 (Length: 236)
Name: NF15653_high_7
Description: NF15653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15653_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 40646832 - 40647051
Alignment:
| Q |
1 |
cacaaacaacttcctctccaaacgctactcttcctcaacaccatgttggcgttgcaccttgcgtaactctgacgtcatcatcttccaacgcaaattccgt |
100 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
40646832 |
cacaaataacttcctctccaaacgctactcttcctcaacaccatgctggcgttgcaccttacgtaactctgacgtcatcatcttccaacgcaaattccgt |
40646931 |
T |
|
| Q |
101 |
cgcaaactccaaacccaacagctgcaagagcttctttccaccatctgtcgcagccaccacgtcagcatcgtgaaactcctcggcgtttcgatctccggtg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40646932 |
cgcaaactccaaacccaacagctgcaagagcttctttccaccatctgtcgcagccaccacgtcagcatcgtgaaactcctcggcgtttcgatctccggtg |
40647031 |
T |
|
| Q |
201 |
aacatatctaccttgtttac |
220 |
Q |
| |
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|||||||||||||||||||| |
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| T |
40647032 |
aacatatctaccttgtttac |
40647051 |
T |
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