View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15654_low_3 (Length: 313)

Name: NF15654_low_3
Description: NF15654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15654_low_3
NF15654_low_3
[»] chr2 (43 HSPs)
chr2 (68-262)||(43173112-43173306)
chr2 (21-124)||(43163561-43163663)
chr2 (107-185)||(11513865-11513943)
chr2 (260-303)||(43173050-43173093)
chr2 (79-143)||(34652033-34652097)
chr2 (105-185)||(36863648-36863728)
chr2 (79-185)||(1939329-1939435)
chr2 (109-185)||(8017401-8017477)
chr2 (84-180)||(43205281-43205377)
chr2 (43-157)||(43985204-43985319)
chr2 (107-185)||(6993749-6993827)
chr2 (79-185)||(9478266-9478372)
chr2 (107-181)||(18066099-18066173)
chr2 (73-186)||(31096266-31096380)
chr2 (79-185)||(35485884-35485990)
chr2 (79-164)||(10285848-10285933)
chr2 (108-165)||(16353848-16353905)
chr2 (96-185)||(22681199-22681288)
chr2 (96-185)||(28933791-28933880)
chr2 (149-185)||(3423835-3423871)
chr2 (107-183)||(6167308-6167384)
chr2 (73-185)||(29316766-29316878)
chr2 (149-185)||(31740026-31740062)
chr2 (140-184)||(33944573-33944617)
chr2 (60-185)||(41851142-41851268)
chr2 (149-184)||(1160811-1160846)
chr2 (98-185)||(6988082-6988169)
chr2 (138-185)||(25609763-25609810)
chr2 (108-183)||(39983311-39983386)
chr2 (107-185)||(11307279-11307357)
chr2 (107-185)||(12313198-12313276)
chr2 (76-134)||(16867757-16867815)
chr2 (151-185)||(17952770-17952804)
chr2 (79-185)||(33942117-33942223)
chr2 (79-185)||(43141838-43141944)
chr2 (21-51)||(43173306-43173336)
chr2 (124-185)||(5043602-5043663)
chr2 (96-185)||(25790093-25790182)
chr2 (117-181)||(1625871-1625935)
chr2 (107-183)||(17221565-17221641)
chr2 (149-185)||(20059109-20059145)
chr2 (38-138)||(24098116-24098215)
chr2 (149-185)||(34339873-34339909)
[»] chr1 (46 HSPs)
chr1 (79-183)||(7218071-7218175)
chr1 (116-183)||(25006068-25006135)
chr1 (107-185)||(27738205-27738283)
chr1 (96-185)||(4200196-4200285)
chr1 (73-170)||(11695843-11695940)
chr1 (98-182)||(17269220-17269304)
chr1 (100-184)||(5150905-5150989)
chr1 (81-185)||(30371115-30371219)
chr1 (98-185)||(16322816-16322903)
chr1 (73-185)||(28689443-28689557)
chr1 (78-185)||(30257650-30257757)
chr1 (79-165)||(4622080-4622166)
chr1 (79-185)||(12477284-12477390)
chr1 (79-185)||(17628566-17628672)
chr1 (151-185)||(28467376-28467410)
chr1 (81-183)||(44031998-44032100)
chr1 (108-181)||(26630434-26630507)
chr1 (79-185)||(35017541-35017649)
chr1 (117-185)||(5421955-5422023)
chr1 (149-185)||(15361680-15361716)
chr1 (73-145)||(27140485-27140557)
chr1 (81-185)||(31517739-31517843)
chr1 (149-185)||(48830143-48830179)
chr1 (149-184)||(9656618-9656653)
chr1 (150-185)||(10439653-10439688)
chr1 (107-186)||(44422665-44422744)
chr1 (98-185)||(45205035-45205122)
chr1 (98-164)||(12564515-12564581)
chr1 (79-185)||(15515508-15515614)
chr1 (116-182)||(25005831-25005897)
chr1 (73-147)||(35925695-35925769)
chr1 (107-185)||(49888734-49888812)
chr1 (98-171)||(23902083-23902156)
chr1 (107-184)||(27820362-27820439)
chr1 (73-178)||(29007707-29007812)
chr1 (111-179)||(8130409-8130477)
chr1 (113-185)||(10581108-10581180)
chr1 (73-185)||(10854700-10854812)
chr1 (85-165)||(12564877-12564957)
chr1 (149-185)||(15360861-15360897)
chr1 (149-185)||(28788605-28788641)
chr1 (142-186)||(37841964-37842008)
chr1 (149-185)||(43372026-43372062)
chr1 (149-185)||(44936657-44936693)
chr1 (149-185)||(45990125-45990161)
chr1 (149-185)||(49517037-49517073)
[»] chr4 (40 HSPs)
chr4 (79-185)||(52735089-52735194)
chr4 (38-184)||(21157736-21157883)
chr4 (79-185)||(2996540-2996646)
chr4 (98-184)||(49219107-49219193)
chr4 (149-185)||(4071849-4071885)
chr4 (73-184)||(23819057-23819168)
chr4 (61-184)||(30207550-30207672)
chr4 (79-185)||(11264268-11264374)
chr4 (75-185)||(11802501-11802611)
chr4 (131-185)||(13949893-13949947)
chr4 (107-145)||(28615530-28615568)
chr4 (107-185)||(30581702-30581780)
chr4 (150-184)||(55437354-55437388)
chr4 (76-185)||(54325031-54325140)
chr4 (149-185)||(8130141-8130177)
chr4 (149-185)||(11917526-11917562)
chr4 (79-183)||(20936226-20936330)
chr4 (149-181)||(24091434-24091466)
chr4 (98-182)||(28300315-28300399)
chr4 (98-185)||(10192251-10192337)
chr4 (122-185)||(27043870-27043933)
chr4 (98-185)||(47118981-47119068)
chr4 (79-185)||(6987738-6987844)
chr4 (149-183)||(21952930-21952964)
chr4 (38-127)||(27123307-27123397)
chr4 (108-185)||(9760407-9760484)
chr4 (73-186)||(29263336-29263449)
chr4 (122-179)||(44638213-44638270)
chr4 (96-185)||(54069431-54069520)
chr4 (79-143)||(1965950-1966014)
chr4 (79-182)||(2980462-2980566)
chr4 (82-146)||(4798566-4798630)
chr4 (98-182)||(18628559-18628643)
chr4 (151-183)||(21879418-21879450)
chr4 (149-185)||(27623602-27623638)
chr4 (149-185)||(30024667-30024703)
chr4 (149-185)||(31038934-31038970)
chr4 (153-185)||(32724086-32724118)
chr4 (107-171)||(38346011-38346075)
chr4 (46-165)||(52754587-52754706)
[»] chr7 (28 HSPs)
chr7 (45-185)||(48157082-48157223)
chr7 (96-185)||(28165058-28165147)
chr7 (79-185)||(12110327-12110433)
chr7 (108-185)||(30456476-30456553)
chr7 (96-185)||(40689000-40689089)
chr7 (78-185)||(44151476-44151583)
chr7 (107-185)||(11208416-11208494)
chr7 (107-185)||(27548230-27548308)
chr7 (109-178)||(24895330-24895399)
chr7 (109-178)||(24909638-24909707)
chr7 (73-134)||(27626114-27626175)
chr7 (96-185)||(38010681-38010770)
chr7 (108-184)||(17989049-17989125)
chr7 (149-185)||(23918924-23918960)
chr7 (152-199)||(27121656-27121704)
chr7 (149-185)||(31002728-31002764)
chr7 (79-185)||(46825065-46825173)
chr7 (122-185)||(1417231-1417294)
chr7 (82-185)||(24363601-24363704)
chr7 (149-184)||(40428523-40428558)
chr7 (149-184)||(49060508-49060543)
chr7 (79-185)||(39907992-39908097)
chr7 (124-185)||(22296270-22296331)
chr7 (107-180)||(23721478-23721551)
chr7 (152-185)||(47046178-47046211)
chr7 (149-185)||(12835004-12835040)
chr7 (156-184)||(30751485-30751513)
chr7 (149-185)||(35536074-35536110)
[»] chr6 (37 HSPs)
chr6 (66-185)||(7785728-7785845)
chr6 (110-185)||(1402963-1403038)
chr6 (79-185)||(9667982-9668088)
chr6 (62-185)||(2117370-2117493)
chr6 (60-185)||(4420612-4420735)
chr6 (79-180)||(6647359-6647460)
chr6 (73-145)||(31624097-31624169)
chr6 (38-185)||(32386518-32386666)
chr6 (79-185)||(281845-281951)
chr6 (73-187)||(283060-283174)
chr6 (61-127)||(8420176-8420242)
chr6 (79-181)||(25100014-25100116)
chr6 (112-185)||(415271-415344)
chr6 (151-184)||(2732308-2732341)
chr6 (129-186)||(4006680-4006737)
chr6 (100-185)||(25426137-25426222)
chr6 (152-185)||(27595637-27595670)
chr6 (152-185)||(27693509-27693542)
chr6 (140-184)||(1904783-1904827)
chr6 (140-184)||(1909016-1909060)
chr6 (149-185)||(22742333-22742369)
chr6 (149-185)||(29274296-29274332)
chr6 (79-183)||(30522437-30522541)
chr6 (154-185)||(3217262-3217293)
chr6 (152-198)||(27615343-27615390)
chr6 (98-185)||(28088238-28088325)
chr6 (109-184)||(33787772-33787847)
chr6 (38-127)||(2460106-2460196)
chr6 (107-185)||(24838768-24838846)
chr6 (151-185)||(27713474-27713508)
chr6 (38-103)||(32976027-32976093)
chr6 (45-134)||(34939762-34939852)
chr6 (152-185)||(7713992-7714025)
chr6 (149-185)||(2027473-2027509)
chr6 (79-143)||(2455819-2455883)
chr6 (149-185)||(5550099-5550135)
chr6 (97-185)||(9093571-9093659)
[»] chr8 (31 HSPs)
chr8 (73-177)||(5088823-5088931)
chr8 (79-185)||(12361159-12361265)
chr8 (107-185)||(3537054-3537134)
chr8 (53-185)||(6509273-6509406)
chr8 (105-186)||(9836877-9836958)
chr8 (80-184)||(28769337-28769441)
chr8 (97-184)||(7918788-7918875)
chr8 (108-183)||(29973050-29973125)
chr8 (107-185)||(6864484-6864562)
chr8 (79-185)||(39551206-39551312)
chr8 (108-185)||(4558765-4558842)
chr8 (152-185)||(29262944-29262977)
chr8 (96-145)||(43504758-43504807)
chr8 (149-185)||(1470923-1470959)
chr8 (96-176)||(13652191-13652271)
chr8 (96-176)||(13710834-13710914)
chr8 (76-176)||(24558829-24558929)
chr8 (129-185)||(34770859-34770915)
chr8 (98-185)||(41336661-41336748)
chr8 (79-134)||(42597456-42597511)
chr8 (149-183)||(7878553-7878587)
chr8 (79-145)||(20672757-20672823)
chr8 (79-185)||(41620288-41620394)
chr8 (79-180)||(11795064-11795165)
chr8 (149-185)||(787173-787209)
chr8 (126-182)||(9834833-9834889)
chr8 (149-185)||(11376670-11376706)
chr8 (79-143)||(25869263-25869327)
chr8 (149-185)||(35374440-35374476)
chr8 (73-185)||(42215297-42215409)
chr8 (149-185)||(42237489-42237525)
[»] chr3 (35 HSPs)
chr3 (79-180)||(37273103-37273207)
chr3 (73-182)||(21367637-21367747)
chr3 (79-185)||(21574458-21574563)
chr3 (73-170)||(50952314-50952412)
chr3 (61-185)||(20192585-20192709)
chr3 (73-185)||(36139845-36139957)
chr3 (150-185)||(1395638-1395673)
chr3 (122-184)||(19679368-19679430)
chr3 (96-185)||(24085352-24085442)
chr3 (79-185)||(36646379-36646485)
chr3 (73-171)||(45541552-45541650)
chr3 (100-169)||(901907-901976)
chr3 (140-185)||(32555039-32555084)
chr3 (98-185)||(2318611-2318699)
chr3 (97-185)||(24887298-24887386)
chr3 (149-230)||(32703065-32703141)
chr3 (59-182)||(1217777-1217900)
chr3 (78-185)||(24235680-24235786)
chr3 (107-178)||(51510218-51510289)
chr3 (78-146)||(52323890-52323960)
chr3 (139-181)||(28779327-28779369)
chr3 (79-185)||(44374642-44374747)
chr3 (96-165)||(14548735-14548804)
chr3 (124-185)||(21872313-21872374)
chr3 (73-186)||(52618969-52619082)
chr3 (149-185)||(23315593-23315629)
chr3 (73-185)||(23785222-23785334)
chr3 (157-185)||(25195391-25195419)
chr3 (109-185)||(30956653-30956729)
chr3 (109-185)||(30972465-30972541)
chr3 (107-199)||(32069103-32069194)
chr3 (115-183)||(33405200-33405268)
chr3 (73-185)||(36101535-36101647)
chr3 (149-185)||(37689451-37689487)
chr3 (129-185)||(40122800-40122855)
[»] chr5 (38 HSPs)
chr5 (113-185)||(38047886-38047958)
chr5 (98-185)||(12425538-12425625)
chr5 (98-184)||(12975315-12975400)
chr5 (98-185)||(10272447-10272534)
chr5 (126-185)||(34205206-34205265)
chr5 (59-182)||(41957428-41957551)
chr5 (111-184)||(912677-912751)
chr5 (107-185)||(26516367-26516445)
chr5 (107-181)||(39105435-39105509)
chr5 (73-182)||(4273368-4273477)
chr5 (73-185)||(14295473-14295585)
chr5 (149-185)||(35135729-35135765)
chr5 (79-146)||(17368682-17368749)
chr5 (98-165)||(26005013-26005080)
chr5 (150-185)||(32969185-32969220)
chr5 (82-185)||(34690841-34690943)
chr5 (107-185)||(9202773-9202851)
chr5 (73-162)||(10391331-10391421)
chr5 (76-182)||(18875331-18875437)
chr5 (79-185)||(32172620-32172726)
chr5 (76-134)||(33533533-33533591)
chr5 (107-185)||(35550916-35550993)
chr5 (107-181)||(35553213-35553287)
chr5 (122-183)||(3951584-3951645)
chr5 (152-185)||(8158371-8158404)
chr5 (60-133)||(31723824-31723897)
chr5 (107-172)||(32408617-32408682)
chr5 (136-185)||(36539713-36539762)
chr5 (96-165)||(37588374-37588443)
chr5 (124-185)||(41277392-41277453)
chr5 (149-185)||(583840-583876)
chr5 (107-179)||(7319379-7319451)
chr5 (73-165)||(13604840-13604932)
chr5 (73-165)||(21768188-21768280)
chr5 (149-185)||(32059656-32059692)
chr5 (82-146)||(37611215-37611279)
chr5 (82-146)||(37787945-37788009)
chr5 (149-185)||(39750110-39750146)
[»] scaffold0024 (1 HSPs)
scaffold0024 (125-185)||(27543-27603)
[»] scaffold0153 (2 HSPs)
scaffold0153 (149-184)||(6565-6600)
scaffold0153 (149-184)||(13585-13620)
[»] scaffold0015 (1 HSPs)
scaffold0015 (153-184)||(69014-69045)
[»] scaffold0349 (1 HSPs)
scaffold0349 (151-185)||(18436-18470)
[»] scaffold0085 (1 HSPs)
scaffold0085 (157-185)||(34072-34100)


Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 68 - 262
Target Start/End: Complemental strand, 43173306 - 43173112
Alignment:
Q  68 acaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaata 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43173306 acaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaata 43173207  T
Q  168 atttgactttattttatcaatattatagaaattgaaatagattatacataagcatttatatgaacgcttatgaagctgtttatttttccttttac 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43173206 atttgactttattttatcaatattatagaaattgaaatagattatacataagcatttatatgaacgcttatgaagctgtttatttttccttttac 43173112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 43163663 - 43163561
Alignment:
Q  21 tggaaaaggaaaaagtgtaagtacttgtgaaactgtttgaagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataag 120  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||| || |||||||||| |||| |||||| | |||||| ||||| || |||||||    
T  43163663 tggaaaaggaaaaagtgtaagtacttgtgaaacagtttggagagtttatagaaacagtttattacatttccacaagatgtttttaactt-ttaccataag 43163565  T
Q  121 atct 124  Q
    ||||    
T  43163564 atct 43163561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 11513943 - 11513865
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||| ||| |||||| |||||| ||| |||||||  ||||||||||||||||| |||||||||||||||||||    
T  11513943 cttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatc 11513865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 43173093 - 43173050
Alignment:
Q  260 tactatatgtaagatggctcacctgatttctttaccaccctttg 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43173093 tactatatgtaagatggctcacctgatttctttaccaccctttg 43173050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 34652033 - 34652097
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaa 143  Q
    |||||||||||||| | |||||||| |||||||||||||||| ||||||||||||| ||| ||||    
T  34652033 ttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 36863648 - 36863728
Alignment:
Q  105 aacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||| |||||| ||||||||||||| ||| |||||||  |||| ||||||| |||||  |||||||||||||||||    
T  36863648 aacttattttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgactttattttatc 36863728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 1939329 - 1939435
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagct-tatatgaaaataatttgacttt 177  Q
    |||||||||||||| | |||||||| |||||||||||||||| ||||||  ||||| ||| ||||| |  |||||||  ||||||||||| ||| |||||    
T  1939329 ttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaac-agttatagctcaatatgaaaatagtttcacttt 1939427  T
Q  178 attttatc 185  Q
    ||||||||    
T  1939428 attttatc 1939435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 8017477 - 8017401
Alignment:
Q  109 tatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| |||||| ||||||||||||| ||| ||||||   || |||||||||||||||||||| ||||| |||||||    
T  8017477 tattttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatttaactttgttttatc 8017401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 43205377 - 43205281
Alignment:
Q  84 acatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatt 180  Q
    |||||||| ||  ||||||| |||||||||||||||| |||||  |||||| ||| |||||| | |||| |||||||||||| | |||| |||||||    
T  43205377 acatgtccgcaaactgttttcaacttatttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaacagtttggctttatt 43205281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 43985319 - 43985204
Alignment:
Q  43 acttgtgaaactgtttga-agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaa 141  Q
    |||||| ||||||||||| |||| |||| | ||||  |||||||||||||| | ||| |||| ||||| |||||||||| ||| || | |||| || |||    
T  43985319 acttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttttcaacttgtttccataagctcttcacggtagcttacaaa 43985220  T
Q  142 aacaaaatatagctta 157  Q
    |||||| |||||||||    
T  43985219 aacaaattatagctta 43985204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 6993749 - 6993827
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| |||||| |||| |  ||||| ||| |||||||  ||||||||||||||| |||||||||| ||||||||||    
T  6993749 cttattttcataagctctcaagcatagcttatgaaaacaacctatagcttatatgaatataatttgaccttattttatc 6993827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 9478372 - 9478266
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||| ||||||||| | |||||||| | |||| |||||| |  |||||| |||||| ||  || |||  |||||||||||||||||||| ||||| ||||    
T  9478372 ttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagcttacgaacacagcatatagcttatatgaaaatattttgagttta 9478273  T
Q  179 ttttatc 185  Q
    |||||||    
T  9478272 ttttatc 9478266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 18066173 - 18066099
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    ||||||| | |||| ||||||||||||| ||| ||||||   ||||||||||||||||| ||||| |||||||||    
T  18066173 cttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 31096380 - 31096266
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||||| || ||||||||| | |||||||||||||||||| |||||| |||  |||||||||| | ||| |||    ||||||| ||||||| | ||||    
T  31096380 aacagttaataacatgtccataagctgttttaaacttattttcataagttcttaaagatagcctgtgaaagcaactattagcttaaatgaaaacagtttg 31096281  T
Q  173 acttt-attttatca 186  Q
    ||||| |||||||||    
T  31096280 actttaattttatca 31096266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 35485990 - 35485884
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||| |||| || | |||||||| | || ||||||||| | ||| || |||||| |||||||||||  |||||||||||   ||||| ||||||||||    
T  35485990 ttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagcttataatgaaatagtttgacttta 35485891  T
Q  179 ttttatc 185  Q
    |||||||    
T  35485890 ttttatc 35485884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 10285933 - 10285848
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaa 164  Q
    |||||||||||||| | |||||||| |||||||||||||||| |||| | | |||| |||  |||| |  ||||||||||||||||    
T  10285933 ttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatatgaaa 10285848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 16353905 - 16353848
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    |||||| || ||||||||||||||||| ||||||||||   |||||||||||||||||    
T  16353905 ttattttcacaagatctccaagatagcttataaaaacagcttatagcttatatgaaaa 16353848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 22681199 - 22681288
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| | |||||||||||||| |||| | |||||  ||| ||||||   ||||||||||||||||| |||||| |||| |||||||    
T  22681199 gctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatc 22681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 28933880 - 28933791
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| |||||||||| || || |||| | |||||| ||| |||||||  |||| |||| ||||||||||||||| || ||||||||    
T  28933880 gctgttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatc 28933791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 3423835 - 3423871
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3423835 tataggttatatgaaaataatttgactttattttatc 3423871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 6167308 - 6167384
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttta 183  Q
    |||||||||||||| ||||||| ||||| ||||||||||   ||||||||| | ||||  ||||| |||||||||||    
T  6167308 cttatttccataagttctccaaaatagcttataaaaacagcttatagcttaaacgaaagcaatttcactttatttta 6167384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 29316766 - 29316878
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| ||||||||||| || | | | |||| | |||||||||||||| |||||||||||||  || ||||||   ||||| |||| |||||| |||||     
T  29316766 aacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaattta 29316865  T
Q  173 actttattttatc 185  Q
    || ||||||||||    
T  29316866 accttattttatc 29316878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 31740026 - 31740062
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31740026 tatagcttatatgaaaatagtttgactttattttatc 31740062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 33944617 - 33944573
Alignment:
Q  140 aaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||    
T  33944617 aaaacaatttatagcttatatgaaaacaatttgactttattttat 33944573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 41851142 - 41851268
Alignment:
Q  60 aagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa--aatatagctta 157  Q
    |||||||||| | ||||| |||||||||||||| | || | ||| |  |||| |||||||| | ||||||||||| |||||||| ||   ||||| ||||    
T  41851142 aagagcttacggaaacagcttatgacatgtccataagccgatttcactttatctccataagttatccaagatagcatataaaaataacttatataactta 41851241  T
Q  158 tatgaaaataatttgactttattttatc 185  Q
    || | ||| |||||||||||||||||||    
T  41851242 tacg-aaacaatttgactttattttatc 41851268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 1160811 - 1160846
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1160811 tatagcttatatgaaaatagtttgactttattttat 1160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 6988169 - 6988082
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | |||||||| ||||  ||| ||||||||| ||| |||||||  |||| ||  || |||||||||||||||||||||||||    
T  6988169 tgttttcatcttatttctataaactcttcaagatagcttatgaaaacaacttataactagtaagaaaataatttgactttattttatc 6988082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 25609810 - 25609763
Alignment:
Q  138 taaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||  ||||||||||| |||||||| ||||||||||||||||    
T  25609810 taaaaacaacttatagcttatacgaaaataaattgactttattttatc 25609763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 39983386 - 39983311
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttta 183  Q
    |||||| ||| || |||||| |||||| ||| |||||||  |||||||||||||||||| |||| | |||||||||    
T  39983386 ttattttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaaattattttattttatttta 39983311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 11307357 - 11307279
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| ||| || ||||||||||||| ||| || | ||  |||||||| |||||||||| |||||||||| ||||||    
T  11307357 cttattttcattagctctccaagatagcgtatgaagataagttatagcttttatgaaaatagtttgactttactttatc 11307279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 12313198 - 12313276
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| |||||| ||||||||||||| |||  ||||||  | ||||||| |  |||||||||| |||||||||||||    
T  12313198 cttattttcataagctctccaagatagcttatgtaaacaatttgtagcttaaacaaaaataatttaactttattttatc 12313276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 16867815 - 16867757
Alignment:
Q  76 agtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagc 134  Q
    |||||||||||| | || | | |||||| |||||||||||||||| |||||||||||||    
T  16867815 agtttatgacatattcataagttgttttcaacttatttccataagctctccaagatagc 16867757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 17952770 - 17952804
Alignment:
Q  151 tagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| |||||||||||||||||    
T  17952770 tagcttatatgaaaatagtttgactttattttatc 17952804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 33942223 - 33942117
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||||||||| || | |||||||| | || |||| ||| || |||| | ||| || ||| |||||||  ||||||||| ||||||| | ||||||||||    
T  33942223 ttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagtttgacttta 33942124  T
Q  179 ttttatc 185  Q
    |||||||    
T  33942123 ttttatc 33942117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 43141944 - 43141838
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||| ||| | | |||||| |  ||||||||||||  ||| || |||||| ||| ||||||   ||||||||||||| ||| ||||||||||||    
T  43141944 ttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgacttta 43141845  T
Q  179 ttttatc 185  Q
     ||||||    
T  43141844 ctttatc 43141838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 43173336 - 43173306
Alignment:
Q  21 tggaaaaggaaaaagtgtaagtacttgtgaa 51  Q
    |||||||||||||||||||||||||||||||    
T  43173336 tggaaaaggaaaaagtgtaagtacttgtgaa 43173306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 5043602 - 5043663
Alignment:
Q  124 tccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||| ||| |||||||  | ||||||||||||||| | |||||||||||||||||    
T  5043602 tccatgatagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatc 5043663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 25790182 - 25790093
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| ||||||||| |||||| |||||| |||||  |||  ||||||  | ||||||||||||||| | |||||||| | ||||||    
T  25790182 gctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagtttgacttcactttatc 25790093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 1625935 - 1625871
Alignment:
Q  117 taagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    |||| ||||||||||||| ||| |||||||  |||| |||||| ||||| ||||| |||||||||    
T  1625935 taagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 17221565 - 17221641
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttta 183  Q
    ||||||||| |||||||||   |||||| ||| ||||||    ||||||||||||| || |||||||||||||||||    
T  17221565 cttatttccgtaagatctctcggatagcttatgaaaacacttaatagcttatatgagaacaatttgactttatttta 17221641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 20059145 - 20059109
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  20059145 tatagcttatatgaaagtaattagactttattttatc 20059109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 24098215 - 24098116
Alignment:
Q  38 taagtacttgtgaaactgtttgaagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagccta 137  Q
    |||| |||||| ||||| ||||| |||||||||| |||| || || ||||| ||| |  ||||||| | |||||||||||||| ||||||| |||| |||    
T  24098215 taagcacttgtaaaactatttga-gagcttacagaaacaattaataacatgcccataaactgttttcagcttatttccataagctctccaaaataggcta 24098117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 34339909 - 34339873
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||| |||||||||||||||||||||||||    
T  34339909 tataccttatacgaaaataatttgactttattttatc 34339873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 7218071 - 7218175
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||| || |||| |||||||| ||||||||| |||||| |||||| |||||  ||| |||||||  ||||||||||||||||| ||||||||||||    
T  7218071 ttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgacttta 7218170  T
Q  179 tttta 183  Q
    |||||    
T  7218171 tttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 25006068 - 25006135
Alignment:
Q  116 ataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttta 183  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||||||||| |||||||||||||||||    
T  25006068 ataagatctccaagatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 27738205 - 27738283
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| |||||||| |||||   ||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  27738205 cttatatccataagctctcctgtatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatc 27738283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 4200285 - 4200196
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||| ||||||| ||||||  ||||| |||| | ||  ||||||| |||||||||||||||||| || ||||||||||||||||    
T  4200285 gctgttttaagcttattttcataagccctccaggatatcttacgaaaacaatatatagcttatatgaaaacaacttgactttattttatc 4200196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 11695940 - 11695843
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatt 170  Q
    |||||||||||||||||||| | |||||||| ||||||||| |||||| | ||||  |||| |||||||||||   |||||||||| |||||| ||||    
T  11695940 aacagtttatgacatgtccataagctgttttcaacttattttcataagctttccagaatagtctataaaaacattttatagcttatttgaaaacaatt 11695843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 17269304 - 17269220
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttt 182  Q
    |||||| |||||||| || |||| |||||| |||||| ||| |||||||  ||| ||||||||||||| ||||||||||||||||    
T  17269304 tgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttatttt 17269220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 5150989 - 5150905
Alignment:
Q  100 ttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||| |||||||||| ||||| ||| || |||||| ||| |||||||| || | |||| ||||||||| ||||||||||||||||    
T  5150989 ttttcaacttatttctataagctcttcatgatagcttatgaaaacaaattacaacttaaatgaaaatagtttgactttattttat 5150905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 30371219 - 30371115
Alignment:
Q  81 atgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatt 180  Q
    |||||||||||| | | |||||| | |||||||| ||| | ||||||| ||  | ||| |||||||  ||||||||||||||||| ||||||| ||||||    
T  30371219 atgacatgtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaacaatttgagtttatt 30371120  T
Q  181 ttatc 185  Q
    |||||    
T  30371119 ttatc 30371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 16322903 - 16322816
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | |||||||||||||| ||| ||| ||||||||| ||||||   |||| ||| |||||||||| ||||||| |||||||||    
T  16322903 tgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatattttatc 16322816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 28689443 - 28689557
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctata--aaaacaaaatatagcttatatgaaaataatt 170  Q
    ||||| |||||||||||||| | | |||||| | ||||||| |||||| | ||||||||||| ||||  |||||||  |||||||||||||||||  | |    
T  28689443 aacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaaccact 28689542  T
Q  171 tgactttattttatc 185  Q
    ||  |||||||||||    
T  28689543 tgcatttattttatc 28689557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 30257757 - 30257650
Alignment:
Q  78 tttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttt 177  Q
    |||||||||||| || | |||||||| | |||||||| |||||  ||||| |||||  ||| |||||||  || |||||||||| ||| | |||||||||    
T  30257757 tttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgacttt 30257658  T
Q  178 attttatc 185  Q
    ||||||||    
T  30257657 attttatc 30257650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 4622166 - 4622080
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    |||||||||||||| | |||||||| | ||||||| || ||| ||||||||||||| |||  |||||   |||||||||||||||||    
T  4622166 ttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaa 4622080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 12477284 - 12477390
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | | |||||| | ||||||||||||   |||||| |||||| ||| |||| |  ||||| |||| ||||||| | ||||||||||    
T  12477284 ttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaaaagcatatatcttacatgaaaacagtttgacttta 12477383  T
Q  179 ttttatc 185  Q
    |||||||    
T  12477384 ttttatc 12477390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 17628672 - 17628566
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | |||||||| | | |||||||| |||| |||||| ||||   |||||||||   ||||  ||||||||||| ||||||||||||    
T  17628672 ttatgacatgtccataagctgttttcagcatatttccaaaagacctccaaaatagttaataaaaacagcttataatttatatgaaaacaatttgacttta 17628573  T
Q  179 ttttatc 185  Q
     ||||||    
T  17628572 ctttatc 17628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 28467376 - 28467410
Alignment:
Q  151 tagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||||||||||||||||||||||    
T  28467376 tagcttatatgaaaataatttgactttattttatc 28467410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 44031998 - 44032100
Alignment:
Q  81 atgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatt 180  Q
    |||||||||||| | ||| |||| | || ||||||||||| ||| ||||||| | ||  |||| |   ||||||||||||||||| ||||||||||||||    
T  44031998 atgacatgtccataagctattttcagctaatttccataagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttatt 44032097  T
Q  181 tta 183  Q
    |||    
T  44032098 tta 44032100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 26630507 - 26630434
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    ||||||||||| | |||||| |||||| ||| ||||||   ||||||||||||||||| ||||| |||||||||    
T  26630507 ttatttccatatgttctccaggatagcgtatcaaaacagtttatagcttatatgaaaacaattttactttattt 26630434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 35017649 - 35017541
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaata--atttgactt 176  Q
    |||||||||||||| | | | |||| |||||||||||||||| |||||| || ||| ||| ||||||  |||||| ||||| ||||| |   ||||||||    
T  35017649 ttatgacatgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactt 35017550  T
Q  177 tattttatc 185  Q
    |||||||||    
T  35017549 tattttatc 35017541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 5421955 - 5422023
Alignment:
Q  117 taagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||| |||||||| ||| |||||||  ||||||||||| ||||| ||||||||| |||||||||    
T  5421955 taagctctctaagatagcttatcaaaacaacttatagcttataagaaaacaatttgactatattttatc 5422023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 15361716 - 15361680
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||||||||||||||||| ||||||    
T  15361716 tatagcttatatgaaaataatttgactttactttatc 15361680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 27140557 - 27140485
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaaca 145  Q
    ||||| |||||||||||||| | | |||||| | ||||||| |||||| |||||| |||||| ||||||||||    
T  27140557 aacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaaca 27140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 31517739 - 31517843
Alignment:
Q  81 atgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatt 180  Q
    ||||||||| || | |||||||| | ||||||| |||||| ||||||||| ||  ||| || |||   ||||||||||||||||  ||||| ||||||||    
T  31517739 atgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatgaaatcaatttaactttatt 31517838  T
Q  181 ttatc 185  Q
    |||||    
T  31517839 ttatc 31517843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 48830143 - 48830179
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48830143 tatagcttatatgaaaatagtttgactttattttatc 48830179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 9656653 - 9656618
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9656653 tatagcttatatgaaaataatttaactttattttat 9656618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 10439688 - 10439653
Alignment:
Q  150 atagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||||||| ||||||||    
T  10439688 atagcttatatgaaaataatttgacttcattttatc 10439653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 44422744 - 44422665
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatca 186  Q
    ||||||| |||||| |||||| |||||| |||||||| |   ||||||||||||||||| | |||||  |||||||||||    
T  44422744 cttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagtttgagattattttatca 44422665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 45205122 - 45205035
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | ||||||||||| |  ||| || |||||| ||| |||||||  | ||||||||||| ||||| |||||||||||||||||    
T  45205122 tgttttcagcttatttccatgaactctacatgatagcttatgaaaacaacttctagcttatatggaaatagtttgactttattttatc 45205035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 12564515 - 12564581
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaa 164  Q
    |||||| | |||||||||||||| ||||||||||||| ||| |||||||  |||| ||| |||||||    
T  12564515 tgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctataccttgtatgaaa 12564581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 15515614 - 15515508
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||| | | ||| |||| || ||||||||||||| | |||| |||| | ||| |||||||  ||||||||||| ||||| | ||||| ||||    
T  15515614 ttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttatgaaaacaacttatagcttatacgaaaacattttgatttta 15515515  T
Q  179 ttttatc 185  Q
    || ||||    
T  15515514 ttctatc 15515508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 25005831 - 25005897
Alignment:
Q  116 ataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttt 182  Q
    ||||| |||||| |||||| ||| |||||||  ||||||||||||||||| || ||||||| |||||    
T  25005831 ataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaacaagttgacttcatttt 25005897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 35925769 - 35925695
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaa 147  Q
    ||||| ||||||||||| || | |||||||| |||||||||||||||  |||||| |||||| |||  |||||||    
T  35925769 aacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatggaaacaaa 35925695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 49888812 - 49888734
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| |||||| |||| |||||||| ||| |||||||   |||||||||| ||||| ||||  |||||||||||||    
T  49888812 cttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatc 49888734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 23902083 - 23902156
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataattt 171  Q
    |||||| | |||| ||||||||| |||| |||||||| | | |||||||  |||||||||||||||||| ||||    
T  23902083 tgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaattattt 23902156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 27820362 - 27820439
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||| |||||  ||||||||||||| ||||||||||  ||||||||||||   ||| |||||  |||||||||||    
T  27820362 cttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaatttagctttattttat 27820439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 29007707 - 29007812
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    |||| ||||||| |||| || | | |||||| | |||||||| ||||| | | |||  ||||| || |||||||  ||||||||||||||||||| ||||    
T  29007707 aacaatttatgatatgttcataagttgttttcagcttatttcgataagcttttcaaagtagccgatgaaaacaacttatagcttatatgaaaatagtttg 29007806  T
Q  173 acttta 178  Q
    ||||||    
T  29007807 acttta 29007812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 8130477 - 8130409
Alignment:
Q  111 tttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttat 179  Q
    |||||||||| | |||| |||||| ||| |||||||  |||||||||| |||||| | |||||||||||    
T  8130477 tttccataagttttccatgatagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttat 8130409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 10581108 - 10581180
Alignment:
Q  113 tccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| || |||  ||||| ||| |||||||  ||||||||| ||||||| | |||||||||||||||||    
T  10581108 tccataagttccccataatagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttattttatc 10581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 10854812 - 10854700
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| ||||||||||| |||| |||||||| | ||||||| | |||| | | || |||||  ||| ||||||| |||||| |||||  |||  | ||||    
T  10854812 aacagcttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaacaacatatagattatacaaaatcagtttg 10854713  T
Q  173 actttattttatc 185  Q
    |||||||||||||    
T  10854712 actttattttatc 10854700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 12564877 - 12564957
Alignment:
Q  85 catgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    |||||||| | |||||||| | ||||||||| ||||  ||  |||||||| ||| |||||||  |||||||||||||||||    
T  12564877 catgtccataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaacaacttatagcttatatgaaaa 12564957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 15360897 - 15360861
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| | |||||||||||||||||    
T  15360897 tatagcttatatgaaaacagtttgactttattttatc 15360861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 28788605 - 28788641
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| | |||||||||||||||||    
T  28788605 tatagcttatatgaaaacagtttgactttattttatc 28788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 37842008 - 37841964
Alignment:
Q  142 aacaaaatatagcttatatgaaaataatttgactttattttatca 186  Q
    ||||| |||||||||||| ||||| ||||| ||||||||||||||    
T  37842008 aacaacatatagcttatacgaaaacaatttaactttattttatca 37841964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 43372026 - 43372062
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||| |||||||||||||||| |||||||||    
T  43372026 tatagcttatgtgaaaataatttgactctattttatc 43372062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 44936657 - 44936693
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  44936657 tatagcttatatgaaaatagtttgactttatcttatc 44936693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 45990125 - 45990161
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  45990125 tatagcttatatgaaaacaattttactttattttatc 45990161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 49517073 - 49517037
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  49517073 tatagcttaaatgaaaacaatttgactttattttatc 49517037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 52735194 - 52735089
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| ||| | |||||  |||||||||||||| ||| ||||||||| ||  ||||||| ||||| ||||||||||| |||||||||||||    
T  52735194 ttatgacatgtccatatgttattttag-cttatttccataagctcttcaagatagcttacgaaaacaacatataacttatatgaaagtaatttgacttta 52735096  T
Q  179 ttttatc 185  Q
    |||||||    
T  52735095 ttttatc 52735089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 184
Target Start/End: Complemental strand, 21157883 - 21157736
Alignment:
Q  38 taagtacttgtgaaactgtttg-aagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcct 136  Q
    |||| |||||| | |||||||| |||||||||||| ||||| ||||||||| | || | |||||||| | |||||||||||||| ||| || |||||| |    
T  21157883 taagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatttccataagctcttcaggatagcat 21157784  T
Q  137 ataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    || ||||||   ||||||||| ||||||| | |||||||||| |||||    
T  21157783 atgaaaacatcttatagcttacatgaaaacagtttgactttagtttat 21157736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 2996646 - 2996540
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | ||| |||| ||||||||| |||| | ||||||||||||| ||| |||||||  |||| ||||||| |||| ||||||||| ||    
T  2996646 ttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaatttgactgta 2996547  T
Q  179 ttttatc 185  Q
    |||||||    
T  2996546 ttttatc 2996540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 49219193 - 49219107
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||||| | |||||||||||||  |||  |||||||  ||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  49219193 tgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttat 49219107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 4071885 - 4071849
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||||||||||||||||||||||||    
T  4071885 tatagcttatatgaaaataatttgactttattttatc 4071849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 23819168 - 23819057
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| |||||||||||||| | | |||||| | |||||||| ||||| ||| ||||||||| ||| ||||||   |||| |||||||||||| | ||||    
T  23819168 aacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagtttg 23819069  T
Q  173 actttattttat 184  Q
    |||  |||||||    
T  23819068 actacattttat 23819057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 30207550 - 30207672
Alignment:
Q  61 agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatat 160  Q
    |||||||| | ||||||  |||||||||||   | |||||||| | |||||||||||||  |||| ||| |||| ||| |||||||  ||||||||||||    
T  30207550 agagcttataagaacagcatatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatat 30207649  T
Q  161 gaaaataatttgactttattttat 184  Q
    ||||| | ||||| ||||||||||    
T  30207650 gaaaacagtttga-tttattttat 30207672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 11264374 - 11264268
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| |  ||||||| |||||||||||||||| |||| | ||| || ||| |||||||  |||| | |||||||| ||||  ||| ||||    
T  11264374 ttatgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaacttataacatatatgaatataacatgagttta 11264275  T
Q  179 ttttatc 185  Q
    |||||||    
T  11264274 ttttatc 11264268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 11802611 - 11802501
Alignment:
Q  75 cagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgac 174  Q
    ||||||||| |||| ||| | |||||||| | ||||||  |||||| ||||||  ||||| ||| |||||||  | |||||||| ||| || ||||||||    
T  11802611 cagtttatggcatggccataagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttatgtgagaaaaatttgac 11802512  T
Q  175 tttattttatc 185  Q
    |||||||||||    
T  11802511 tttattttatc 11802501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 13949893 - 13949947
Alignment:
Q  131 tagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||| ||||||  ||||||||||||||||| |||||||||||||||||||    
T  13949893 tagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatc 13949947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 145
Target Start/End: Complemental strand, 28615568 - 28615530
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaaca 145  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28615568 cttatttccataagctctccaagatagcctataaaaaca 28615530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 30581702 - 30581780
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||  ||||||||||| | ||| ||||||   ||||||||||| ||||||| |||||||| ||||||||    
T  30581702 cttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcattttatc 30581780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 55437354 - 55437388
Alignment:
Q  150 atagcttatatgaaaataatttgactttattttat 184  Q
    |||||||||||||||||||||||||||||||||||    
T  55437354 atagcttatatgaaaataatttgactttattttat 55437388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 54325031 - 54325140
Alignment:
Q  76 agtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgact 175  Q
    ||||||||| ||||||| | |||||||| |  |||| |||||||  |||||| |||||| | | |||| |   ||||||||||||||||| | |||||||    
T  54325031 agtttatgatatgtccataagctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgact 54325130  T
Q  176 ttattttatc 185  Q
    ||||||||||    
T  54325131 ttattttatc 54325140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 8130177 - 8130141
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8130177 tatagcttatatgaaaataatttgactttatgttatc 8130141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 11917562 - 11917526
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11917562 tataggttatatgaaaataatttgactttattttatc 11917526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 20936226 - 20936330
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||| |||| || | |||||||| | |||||||||||||  |||||| |||||  ||| |||||||  ||||| |||||| |||| |||||||||| |    
T  20936226 ttatgatatgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaaacaacctatagattatataaaaacaatttgacttca 20936325  T
Q  179 tttta 183  Q
    |||||    
T  20936326 tttta 20936330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 24091466 - 24091434
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattt 181  Q
    |||||||||||||||||||||||||||||||||    
T  24091466 tatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 28300315 - 28300399
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttt 182  Q
    |||||| ||||||||| |||||| ||| ||||||||||||| |||| |   |||||||||||  |||| ||||| ||||||||||    
T  28300315 tgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttatacaaaaacaatttaactttatttt 28300399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 10192337 - 10192251
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| ||||||||| |||| | |||||| |||||| | | |||||||  |||| |||||||||||| |||||||||||||| ||||    
T  10192337 tgttttcaacttattttcata-gctctccaggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatc 10192251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 27043870 - 27043933
Alignment:
Q  122 tctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||  ||||||||||   ||||||||||| ||||| ||||| |||||||||||||    
T  27043870 tctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattttatc 27043933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 47118981 - 47119068
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | ||||| | |||||| ||| ||||||||| ||| || ||||  ||||||||||||||||| ||||| ||||| |||||||    
T  47118981 tgttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatc 47119068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 6987738 - 6987844
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| |  || |||| |||||||||||||||| |||||| |||||| || ||||| ||   |||| | ||| ||||| | |||||||||     
T  6987738 ttatgacatgtccataaactattttcaacttatttccataagctctccaggatagcgtaaaaaaataactaatagttaatacgaaaacagtttgactttg 6987837  T
Q  179 ttttatc 185  Q
    |||||||    
T  6987838 ttttatc 6987844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 21952964 - 21952930
Alignment:
Q  149 tatagcttatatgaaaataatttgactttatttta 183  Q
    ||||||||||||||||| |||||||||||||||||    
T  21952964 tatagcttatatgaaaacaatttgactttatttta 21952930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 27123307 - 27123397
Alignment:
Q  38 taagtacttgtgaaactgtttga-agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctcca 127  Q
    ||||||||||||| ||||||||| ||||||||  | ||||  ||||||||||||   | | |||||| |||||||||||||||| ||||||    
T  27123307 taagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctcca 27123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 9760484 - 9760407
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| |||||| ||||||| ||||| |||||||||||  |||||| |||   |||| ||||| |||||||||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatc 9760407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 29263449 - 29263336
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| |||||| |||| || | | |||||| | |||||||||| ||| ||| || |||||| ||| |||||||  ||| |||||| |||||| ||| |     
T  29263449 aacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaatgta 29263350  T
Q  173 actttattttatca 186  Q
    ||||||||||||||    
T  29263349 actttattttatca 29263336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 44638213 - 44638270
Alignment:
Q  122 tctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttat 179  Q
    ||||||||||||| |||| ||||||  |||||||||||||||  |||||| |||||||    
T  44638213 tctccaagatagcttatacaaacaacttatagcttatatgaatgtaatttaactttat 44638270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 54069431 - 54069520
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| ||||||||| |||| | ||| ||| ||| | |||||||||||| |||||| ||||  |||| ||||| || ||||||||||    
T  54069431 gctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaacaatttaacattattttatc 54069520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 1966014 - 1965950
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaa 143  Q
    ||||||||||| || | |||||||| |||||||||||| ||||| || | |||||| ||||||||    
T  1966014 ttatgacatgttcataagctgtttttaacttatttccagaagatttctaggatagcttataaaaa 1965950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 2980462 - 2980566
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctcc-aagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttt 177  Q
    |||||||||||||| | ||||| || | ||||||| |||| |||||   |||||||| ||| | |||||  |||| ||| |||||||||| |||||||||    
T  2980462 ttatgacatgtccataagctgtgttcagcttattttcatatgatctttgaagatagcttatgagaacaacttataacttgtatgaaaatagtttgacttt 2980561  T
Q  178 atttt 182  Q
    |||||    
T  2980562 atttt 2980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 4798566 - 4798630
Alignment:
Q  82 tgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa 146  Q
    |||||||| || | |||||||| | ||||||| |||||| ||||||||||||| ||| |||||||    
T  4798566 tgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaaacaa 4798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 18628559 - 18628643
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttt 182  Q
    |||||| | |||||||||||||| ||||||||||| | ||| ||||||   |||| ||||||| |||| | ||||||| ||||||    
T  18628559 tgttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttt 18628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 21879450 - 21879418
Alignment:
Q  151 tagcttatatgaaaataatttgactttatttta 183  Q
    ||||||| |||||||||||||||||||||||||    
T  21879450 tagcttaaatgaaaataatttgactttatttta 21879418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 27623638 - 27623602
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||| |||||| |||||||||||||||||    
T  27623638 tatagcttatattaaaatagtttgactttattttatc 27623602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 30024703 - 30024667
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  30024703 tatagcttatatgaaaacaattttactttattttatc 30024667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 31038934 - 31038970
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||||||||| |||||||||||||||||||    
T  31038934 tataacttatatgaaaacaatttgactttattttatc 31038970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 32724118 - 32724086
Alignment:
Q  153 gcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||| |||||||||||||||||    
T  32724118 gcttatatgaaaatagtttgactttattttatc 32724086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 38346011 - 38346075
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataattt 171  Q
    ||||||| |||||  | ||||||||||||||| ||||||  ||||| |||||| |||||||||||    
T  38346011 cttatttacataacctatccaagatagcctatgaaaacatcatatatcttatacgaaaataattt 38346075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 52754706 - 52754587
Alignment:
Q  46 tgtgaaactgtttg-aagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaac 144  Q
    |||||||||||||| |||||||||    ||||||||||||| |||||| | |||| ||| | ||||||||| |||||| ||| | ||||| ||| |||||    
T  52754706 tgtgaaactgtttggaagagcttatgaaaacagtttatgacgtgtccataagctgctttcagcttatttcc-taagatttccgaaatagcttatgaaaac 52754608  T
Q  145 aaaatatagcttatatgaaaa 165  Q
    |   |||||||||| ||||||    
T  52754607 agcttatagcttatgtgaaaa 52754587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 185
Target Start/End: Original strand, 48157082 - 48157223
Alignment:
Q  45 ttgtgaaactgtttga-agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaa 143  Q
    |||||| ||||||||  |||||||| || ||||  ||||| |||||||| | |||||||| | ||||||||||||||||||||   ||||| | | ||||    
T  48157082 ttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaa 48157181  T
Q  144 caaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||||||||| |||| ||||| |||||||||||||    
T  48157182 caaattatagcttatattaaaacaatttcactttattttatc 48157223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 28165147 - 28165058
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| |||||||||||||||| |||||| |||||| |||||| |||   |||||||||||| |||| |||||||||| ||||||||    
T  28165147 gctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatc 28165058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 12110433 - 12110327
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||||||||| ||||  ||||||| |  |||||| |||||| ||| ||||||||| ||| ||||||   |||||||||||  |||| ||||||||||||    
T  12110433 ttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgacttta 12110334  T
Q  179 ttttatc 185  Q
    |||||||    
T  12110333 ttttatc 12110327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 30456476 - 30456553
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| |||||| ||||||||||||  ||| ||||| |  |||| |||||||||||| |||||||||||||||||||    
T  30456476 ttattttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatc 30456553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 40689000 - 40689089
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| | ||||||| |||||| | |||| |||||| ||| || |||   ||||||||||||||||||||||| |||||||||||||    
T  40689000 gctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatc 40689089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 44151476 - 44151583
Alignment:
Q  78 tttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttt 177  Q
    ||||||||||||||| | | |||||| | |||||||||||||| | | ||||||||  ||| |||||||  ||||||||||||| ||| | ||| |||||    
T  44151476 tttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttacttt 44151575  T
Q  178 attttatc 185  Q
    ||| ||||    
T  44151576 attctatc 44151583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 11208494 - 11208416
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||| ||  |||||||||| ||| ||||||| |||||| |||||||||||   ||||| |||||||||||    
T  11208494 cttatttccataaaatacccaagatagcttatgaaaacaacatatagtttatatgaaaacggtttgagtttattttatc 11208416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 27548308 - 27548230
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| |||||||| | ||||||||||| ||| ||||||   ||||||||| ||||||| |||| ||||||||||||||    
T  27548308 cttatctccataagttatccaagatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatc 27548230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 24895399 - 24895330
Alignment:
Q  109 tatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||| ||||||  ||| | | | |||||||  ||||||||||||||||||||||||||||||    
T  24895399 tatttccataagctctccacaatatcttgtgaaaacaacttatagcttatatgaaaataatttgacttta 24895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 24909707 - 24909638
Alignment:
Q  109 tatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||| ||| ||||||  ||| | ||| |||||||  ||||||||||||||||||||||||||||||    
T  24909707 tatttccacaagctctccacaatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 24909638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 27626114 - 27626175
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagc 134  Q
    ||||| |||||||||||||| |  |||||||||||||||||||||||| ||| || ||||||    
T  27626114 aacagcttatgacatgtccataaactgttttaaacttatttccataagctcttcatgatagc 27626175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 38010770 - 38010681
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| | |||||||||||||| |||| | |||||  ||| ||||||   ||||||||||||||||| |||||| |||| |||||||    
T  38010770 gctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatc 38010681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 17989049 - 17989125
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||||| |||||| ||| || || ||| ||| |||||||| ||||| ||||||||||| | ||||||||||||||||    
T  17989049 ttattttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttat 17989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 23918960 - 23918924
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| |||||||||||||||||||    
T  23918960 tatagcttatatgaaaacaatttgactttattttatc 23918924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 27121656 - 27121704
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatca-atattatagaaat 199  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  27121656 agcttatatgaaaacaatttgactttattttatcatttattatagaaat 27121704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 31002764 - 31002728
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31002764 tatagcttatatgaaaatattttgactttattttatc 31002728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 46825173 - 46825065
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaa-cttatttc-cataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactt 176  Q
    |||||||||||||||  | ||||||  | |||||||| ||||||  |||||||||||| ||| |||||    ||| ||||||||||||| ||||||||||    
T  46825173 ttatgacatgtccacgagttgttttttagcttatttctcataagcactccaagatagcttatgaaaacggtttatggcttatatgaaaacaatttgactt 46825074  T
Q  177 tattttatc 185  Q
    |||||||||    
T  46825073 tattttatc 46825065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 1417294 - 1417231
Alignment:
Q  122 tctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | |||| ||| |||||||  ||| ||||||||||||| |||||||||||||||||||    
T  1417294 tctccatgctagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatc 1417231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 24363601 - 24363704
Alignment:
Q  82 tgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    ||||||||||| | | |||||| | |||||||||||||  |||||| |||||| ||| |||||||  |||| | | ||||||||||  |||||| |||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataacctgtatgaaaatagattgactctattt 24363700  T
Q  182 tatc 185  Q
    ||||    
T  24363701 tatc 24363704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 40428558 - 40428523
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||||||||||||| ||||||||||||    
T  40428558 tatagcttatatgaaaataatttaactttattttat 40428523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 49060543 - 49060508
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttat 184  Q
    |||||||||||| |||||||||||||||||||||||    
T  49060543 tatagcttatataaaaataatttgactttattttat 49060508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 39907992 - 39908097
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | |||| ||| | |||||||||| ||| |||||||  |||| |||  || ||   |||||||||||||| ||| |||||||||||    
T  39907992 ttatgacatgtccataagctggtttcatcttatttccacaagctctccaatttagcttatggaa-cagcttatagcttatatgataattatttgacttta 39908090  T
Q  179 ttttatc 185  Q
    |||||||    
T  39908091 ttttatc 39908097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 22296270 - 22296331
Alignment:
Q  124 tccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||  ||| |||||||  ||||| ||||| ||||||||||| |||||||||||||    
T  22296270 tccaagatagtttatgaaaacaatttataggttataggaaaataatttaactttattttatc 22296331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 23721551 - 23721478
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatt 180  Q
    ||||||||||||||  | | | |||||| |||||||||||  ||||| ||| ||||||||| ||||||||||||    
T  23721551 cttatttccataagcgcacaaggatagcttataaaaacaacttatagtttaaatgaaaatagtttgactttatt 23721478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 47046178 - 47046211
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||| |||||||||||||||||||    
T  47046178 agcttatatgaaaacaatttgactttattttatc 47046211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 12835004 - 12835040
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  12835004 tatagctaatatgaaaacaatttgactttattttatc 12835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 30751513 - 30751485
Alignment:
Q  156 tatatgaaaataatttgactttattttat 184  Q
    |||||||||||||||||||||||||||||    
T  30751513 tatatgaaaataatttgactttattttat 30751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 35536110 - 35536074
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||||||||| |||||||||||||||||||    
T  35536110 tataacttatatgaaaacaatttgactttattttatc 35536074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 7785728 - 7785845
Alignment:
Q  66 ttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    |||||| ||||| |||||||||||| | | | |||||| | |||||||||||||| ||||||| |||||  || || ||||  |||||||||||||||||    
T  7785728 ttacagaaacagcttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatagc--atgaagacaatttatagcttatatgaaaa 7785825  T
Q  166 taatttgactttattttatc 185  Q
     | |||||||||||||||||    
T  7785826 gagtttgactttattttatc 7785845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 1403038 - 1402963
Alignment:
Q  110 atttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| |||||||||||| |||||| ||| |||||||  ||||||||||||||||||| ||| |||||||||||||    
T  1403038 atttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatc 1402963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 9667982 - 9668088
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | |||||||| |||||||||||||||| ||||| | | ||  ||| |||||||| | ||||||||||||||| |||| |||| ||    
T  9667982 ttatgacatgtccataagctgttttcaacttatttccataagctctccgaaacagtttatgaaaacaaattgtagcttatatgaaaacaattcgactcta 9668081  T
Q  179 ttttatc 185  Q
    | |||||    
T  9668082 tgttatc 9668088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 2117493 - 2117370
Alignment:
Q  62 gagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatg 161  Q
    ||||||| || |||| |||||| |||||| | | |||||||| | |||||||| ||||| |||| | |||| | ||| |||||||  ||||| |||||||    
T  2117493 gagcttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatg 2117394  T
Q  162 aaaataatttgactttattttatc 185  Q
    |||||| ||||||||| |||||||    
T  2117393 aaaatagtttgactttgttttatc 2117370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 4420735 - 4420612
Alignment:
Q  60 aagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttata 159  Q
    ||||||||| || ||||  ||||||||||| || | |||||||| | |||||||||||||| ||||||||||||| ||  |||  | ||  |||||||||    
T  4420735 aagagcttatagaaacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaa--ataacttagcttata 4420638  T
Q  160 tgaaaataatttgactttattttatc 185  Q
      |||||| |||||||||||||||||    
T  4420637 caaaaatagtttgactttattttatc 4420612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 6647460 - 6647359
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||||||||| || | | |||||| ||||||||| |||||| |||| |||||||| ||| |||||| | |||| | ||||| ||| |||||||||||||    
T  6647460 ttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaacagattataacctatattaaagtaatttgacttta 6647361  T
Q  179 tt 180  Q
    ||    
T  6647360 tt 6647359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 31624169 - 31624097
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaaca 145  Q
    ||||| ||||||||||| || | |||||||| ||||||||| |||||  ||||||||||||||||| ||||||    
T  31624169 aacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaaca 31624097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 32386518 - 32386666
Alignment:
Q  38 taagtacttgtgaaactgtttgaa-gagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcct 136  Q
    ||||||||||||| || ||||||| |||||||  | || |  |||| |||||||||||   |||||| | ||||||| |||||| |||||| |||| |      
T  32386518 taagtacttgtgagaccgtttgaaagagcttatggaaatatcttataacatgtccacaacttgttttcagcttattttcataagctctccaggataacta 32386617  T
Q  137 ataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    || |||||||  |||| |||||||||||| |||||||| ||||||||||    
T  32386618 atgaaaacaacgtataccttatatgaaaacaatttgaccttattttatc 32386666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 281845 - 281951
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||| | | | |||||| | ||||||||||| || |||| | |||||| ||| || |||   ||||||||||||||||| || |||||||||    
T  281845 ttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgacttta 281944  T
Q  179 ttttatc 185  Q
    |||||||    
T  281945 ttttatc 281951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 283174 - 283060
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| |||||||||||||| |  || |||| | |||||||| ||||| |  | ||||||||||||  ||||| | ||||||||||| ||||| | ||||    
T  283174 aacagcttatgacatgtccataaactattttcagcttatttctataagcttccgaagatagcctatgcaaacagattatagcttatacgaaaacagtttg 283075  T
Q  173 actttattttatcaa 187  Q
    | |||||||||||||    
T  283074 attttattttatcaa 283060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 8420176 - 8420242
Alignment:
Q  61 agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctcca 127  Q
    |||||||| || || || |||||||||||||||| ||| |||| |||||||||||||||| ||||||    
T  8420176 agagcttatagaaatagcttatgacatgtccacaagctattttcaacttatttccataagctctcca 8420242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 25100116 - 25100014
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||||||||| ||  |||| |||| |||||||||| ||||| |||  |||||||| ||| |||||||  |||| ||| |||||||| ||||||||| ||    
T  25100116 ttatgacatgttcatttgctattttcaacttatttctataagctctttaagatagcttatgaaaacaacttataacttctatgaaaacaatttgactcta 25100017  T
Q  179 ttt 181  Q
    |||    
T  25100016 ttt 25100014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 415344 - 415271
Alignment:
Q  112 ttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||| ||||||  ||||| |||||||||||  ||||||||||| ||||| ||||| ||||| |||||||    
T  415344 ttccataagttctccactatagcttataaaaacaacttatagcttatacgaaaacaatttaactttgttttatc 415271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 2732308 - 2732341
Alignment:
Q  151 tagcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||||||||||||||||||||||||    
T  2732308 tagcttatatgaaaataatttgactttattttat 2732341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 4006737 - 4006680
Alignment:
Q  129 gatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatca 186  Q
    |||||| ||| |||||||  |||||||||||| |||| ||||||||||||||||||||    
T  4006737 gatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatca 4006680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 25426222 - 25426137
Alignment:
Q  100 ttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||||||| ||||  |||||| |||||| |||||||| |   ||||||||| ||||||  |||||||||||||||||||    
T  25426222 tttttaacttatttctataaattctccaggatagcttataaaaatagcttatagcttacatgaaagcaatttgactttattttatc 25426137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 27595637 - 27595670
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||||||||||||||    
T  27595637 agcttatatgaaaataatttgactttattttatc 27595670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 27693509 - 27693542
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||||||||||||||    
T  27693509 agcttatatgaaaataatttgactttattttatc 27693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 1904827 - 1904783
Alignment:
Q  140 aaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||||||  |||||||||||| |||||||||||||||||||||||    
T  1904827 aaaacaatctatagcttatataaaaataatttgactttattttat 1904783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 1909060 - 1909016
Alignment:
Q  140 aaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||||||  |||||||||||| |||||||||||||||||||||||    
T  1909060 aaaacaatctatagcttatataaaaataatttgactttattttat 1909016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 22742369 - 22742333
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| |||||||||||||||||||    
T  22742369 tatagcttatatgaaaacaatttgactttattttatc 22742333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 29274296 - 29274332
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29274296 tatagcttatatgaaaacaatttgactttattttatc 29274332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 30522437 - 30522541
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||||||||| || | || ||| | | ||||||| |||||  |||||| ||||||  |||||| || | ||||||||||||||||||| ||| ||||||    
T  30522437 ttatgacatgttcaaaagccgttgttagcttatttgcataaactctccaggatagctaataaaagcagattatagcttatatgaaaatagtttcacttta 30522536  T
Q  179 tttta 183  Q
    |||||    
T  30522537 tttta 30522541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 185
Target Start/End: Original strand, 3217262 - 3217293
Alignment:
Q  154 cttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||||||||||||    
T  3217262 cttatatgaaaataatttgactttattttatc 3217293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 27615343 - 27615390
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatc-aatattatagaaa 198  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||    
T  27615343 agcttatatgaaaagaatttgactttattttatctattattatagaaa 27615390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 28088238 - 28088325
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | ||||||||||| || |||||| |||||| ||| ||||||   ||||||||||||||||| ||| ||  |||||||||||    
T  28088238 tgttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaacaatctgcatttattttatc 28088325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 33787772 - 33787847
Alignment:
Q  109 tatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||||||||||| ||||||||||| | ||| ||||||   |||| |||||||||||  ||||||||||| ||||||    
T  33787772 tatttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttat 33787847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 2460106 - 2460196
Alignment:
Q  38 taagtacttgtgaaactgtttga-agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctcca 127  Q
    ||||||||||||| ||||||||| ||||||||  | ||||  ||||||||||||   | | |||||| |||||||||||||||| ||||||    
T  2460106 taagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctcca 2460196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 24838768 - 24838846
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| ||||| |||||| |||||| ||| ||| ||   |||||||||||||||||||||| | |||| |||||||    
T  24838768 cttatttctataagctctccatgatagcttatgaaatcagcttatagcttatatgaaaataattagtctttgttttatc 24838846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 27713508 - 27713474
Alignment:
Q  151 tagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||| |||||||||||||||||||    
T  27713508 tagcttatatgaaaagaatttgactttattttatc 27713474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 32976093 - 32976027
Alignment:
Q  38 taagtacttgtgaaactgttt-gaagagcttacaggaacagtttatgacatgtccacatgctgtttt 103  Q
    ||||||||||||| ||||||| |||||||||| || ||||| ||||||||| |||| | ||||||||    
T  32976093 taagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagctgtttt 32976027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 34939852 - 34939762
Alignment:
Q  45 ttgtgaaactgttt-gaagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagc 134  Q
    |||||||||||||| | ||||||||| | ||||| |||||||||||||| |   |||||| | |||||||||||||  |||||| ||||||    
T  34939852 ttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagc 34939762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 7714025 - 7713992
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||| |||||||||||||||||||    
T  7714025 agcttatatgaaaacaatttgactttattttatc 7713992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 2027473 - 2027509
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  2027473 tataggttatatgaaaatagtttgactttattttatc 2027509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 2455883 - 2455819
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaa 143  Q
    |||||||||| ||| |  || |||| |||||||||||||||| ||||||||||||| ||| ||||    
T  2455883 ttatgacatgcccataaactattttcaacttatttccataagctctccaagatagcttatgaaaa 2455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 5550135 - 5550099
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  5550135 tatagcttatatgaaaacaatttgactttatgttatc 5550099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 9093571 - 9093659
Alignment:
Q  97 ctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| | ||||||| | |||| |||| |||| ||| ||| ||||||   ||||||||||| ||||| ||||| |||||||||||||    
T  9093571 ctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatc 9093659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 177
Target Start/End: Complemental strand, 5088931 - 5088823
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaa----atatagcttatatgaaaataa 168  Q
    |||||||||| ||||||||| | |||||||| |||||||||| ||||| |||||| ||| || | | |||||||     |||||||||||||||||||||    
T  5088931 aacagtttataacatgtccataagctgttttcaacttatttcaataagctctccaggatcgcttgtgaaaacaacttatatatagcttatatgaaaataa 5088832  T
Q  169 tttgacttt 177  Q
    |||||||||    
T  5088831 tttgacttt 5088823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 12361265 - 12361159
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | |||||||| ||||||||||||| || |||||   ||| | ||| ||||||   ||||||||||||||||| |||||||||| |    
T  12361265 ttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttca 12361166  T
Q  179 ttttatc 185  Q
    |||||||    
T  12361165 ttttatc 12361159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 3537054 - 3537134
Alignment:
Q  107 cttatttccataagatctccaagatagcctata--aaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||| ||||||||||| | ||||  | |||||  ||||||||||| ||||| |||||||||||||||||||    
T  3537054 cttatttccataagttctccaagatatcttatatgataacaacctatagcttatacgaaaacaatttgactttattttatc 3537134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 6509273 - 6509406
Alignment:
Q  53 ctgtttga-agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatat 151  Q
    |||||||| |||||||| || ||||| |||||||||| | | |  || |||| | |||||||| ||||| |||||| |||||| ||| ||||||   |||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttcaccttatttcaataagctctccaggatagcttatgaaaacagcttat 6509372  T
Q  152 agcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||| || | |||||||||||||||||||    
T  6509373 agcttatataaatacaatttgactttattttatc 6509406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 9836877 - 9836958
Alignment:
Q  105 aacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatca 186  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||   | || |||||||||||||| |||||||||| |||||||    
T  9836877 aactcatttccataagctctccaagatagcttatgaaaacaggttgtaacttatatgaaaatagtttgactttactttatca 9836958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 28769337 - 28769441
Alignment:
Q  80 tatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttat 179  Q
    ||||| ||||||| | | |||||| | |||||||||||||  ||||||| ||||| ||| ||||||   ||||||||||| ||||||| |||||||| ||    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaat 28769436  T
Q  180 tttat 184  Q
    |||||    
T  28769437 tttat 28769441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 7918788 - 7918875
Alignment:
Q  97 ctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||| | |||||||||| ||| ||| ||||||||| ||| |||||||  ||||||||| | ||||| ||||| ||||||||||||    
T  7918788 ctgttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttattttat 7918875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 29973125 - 29973050
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttta 183  Q
    ||||||||||||  |||| | |||||| ||| |||||||  |||||||||| |||||||| |||||||||||||||    
T  29973125 ttatttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttatttta 29973050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 6864484 - 6864562
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||  ||| ||||||| ||||| ||| |||||||  |||| |||| ||||||||| |||||||||||||||||    
T  6864484 cttatttcctcaagctctccaaaatagcttatgaaaacaacttataacttacatgaaaatagtttgactttattttatc 6864562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 39551206 - 39551312
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | |||||||| |||||||||  ||||| |||||| || ||| ||| |||||||  |||||||| |||||| | | |||  |||||    
T  39551206 ttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttatagcttgtatgaagacagtttagcttta 39551305  T
Q  179 ttttatc 185  Q
    |||||||    
T  39551306 ttttatc 39551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 4558842 - 4558765
Alignment:
Q  108 ttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||| |||| | |||||| |||  |||||   |||||| |||||||||||||||| |||||||||||||    
T  4558842 ttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatc 4558765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 29262944 - 29262977
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||||||||||||||    
T  29262944 agcttatatgaaaataatttgactttattttatc 29262977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 43504807 - 43504758
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaaca 145  Q
    |||||||| | |||||||||||||| ||||||||||||| ||||||||||    
T  43504807 gctgttttcagcttatttccataagttctccaagatagcttataaaaaca 43504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 1470923 - 1470959
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1470923 tatagcttatatgaaagtaatttgactttattttatc 1470959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 13652271 - 13652191
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactt 176  Q
    ||||||||  |||||||||| |||| ||||||  ||||| |||||||||||  |||| |||||||||||| ||||| ||||    
T  13652271 gctgttttctacttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcactt 13652191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 13710914 - 13710834
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactt 176  Q
    ||||||||  |||||||||| |||| ||||||  ||||| |||||||||||  |||| |||||||||||| ||||| ||||    
T  13710914 gctgttttctacttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcactt 13710834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 24558929 - 24558829
Alignment:
Q  76 agtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgact 175  Q
    ||||||||||| || || | ||| | || ||||||||| ||| |  ||||||||||||| ||| |||||||  ||||||||||| ||||||||||| |||    
T  24558929 agtttatgacacgttcataagctatgttcaacttatttacattaagtctccaagatagcttatgaaaacaacttatagcttatacgaaaataatttaact 24558830  T
Q  176 t 176  Q
    |    
T  24558829 t 24558829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 34770915 - 34770859
Alignment:
Q  129 gatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| ||| |||||||  ||||||||| ||||||| |||||||||||||||||||    
T  34770915 gatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatc 34770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 41336661 - 41336748
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | |||||||||  ||| ||||| ||||||| ||| |||||||  | ||| ||||||||||| ||||||||| |||||||||    
T  41336661 tgttttcagcttatttccgcaagctctcctagatagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattttatc 41336748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 42597511 - 42597456
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagc 134  Q
    |||||||||||| | | |||||||| |||||||||||||||| | |||||||||||    
T  42597511 ttatgacatgtctataagctgttttcaacttatttccataagttatccaagatagc 42597456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 7878553 - 7878587
Alignment:
Q  149 tatagcttatatgaaaataatttgactttatttta 183  Q
    ||||||||||||||||| |||||||||||||||||    
T  7878553 tatagcttatatgaaaacaatttgactttatttta 7878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 20672823 - 20672757
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaaca 145  Q
    ||||||||||| || | |||||||| | ||||||| |||||| |||||| |||||| ||||||||||    
T  20672823 ttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 41620288 - 41620394
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | | ||||||   ||||||| || ||| ||  ||||||||| ||||||||||   | |||  |||||||| ||||||||||||||    
T  41620288 ttatgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaacagcttttagaatatatgaacataatttgacttta 41620387  T
Q  179 ttttatc 185  Q
    |||||||    
T  41620388 ttttatc 41620394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 11795165 - 11795064
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| |  ||||||| | |||||||||||||| ||||||  ||||| ||| ||| ||   |||| |||||||||||| | | ||||||||    
T  11795165 ttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgacttta 11795066  T
Q  179 tt 180  Q
    ||    
T  11795065 tt 11795064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 787173 - 787209
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||| || |||||||||||||||||||    
T  787173 tatagcttatatgataacaatttgactttattttatc 787209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 9834833 - 9834889
Alignment:
Q  126 caagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttt 182  Q
    ||||||||| ||| |||||||  ||||||||||||||||| ||||||  ||||||||    
T  9834833 caagatagcttatgaaaacaacttatagcttatatgaaaacaatttggttttatttt 9834889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 11376706 - 11376670
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  11376706 tatagcttatatcaaaataattagactttattttatc 11376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 25869263 - 25869327
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaa 143  Q
    |||||||||||||| | | |||||| | |||||||||||||  |||||| |||||||||| ||||    
T  25869263 ttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaa 25869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 35374440 - 35374476
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  35374440 tatagcttatatgaaaacaatttaactttattttatc 35374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 42215297 - 42215409
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| ||||||| ||| || | |||||||| | ||||||| |||||| |||||| |||||| ||| |||| |   ||||| |||||  |||| | ||||    
T  42215297 aacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagtttg 42215396  T
Q  173 actttattttatc 185  Q
    |||||||||||||    
T  42215397 actttattttatc 42215409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 42237489 - 42237525
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  42237489 tatagcttatatgaaaacaatttaactttattttatc 42237525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 37273207 - 37273103
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaaca---aaatatagcttatatgaaaataatttgact 175  Q
    |||||||||||||| | | |||||| |||||||||||||||| ||||||||||||| ||| ||||||    | |||| ||||||| |||| |||||||||    
T  37273207 ttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacagtttattatatcttatataaaaacaatttgact 37273108  T
Q  176 ttatt 180  Q
    |||||    
T  37273107 ttatt 37273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 21367747 - 21367637
Alignment:
Q  73 aacagtttatgacat-gtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataattt 171  Q
    ||||| ||||||||| || |||| |||||||| | ||||||| |||||| ||||||||||||| ||| |||||||  ||||  ||||| ||||| |||||    
T  21367747 aacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaattt 21367648  T
Q  172 gactttatttt 182  Q
     ||||||||||    
T  21367647 aactttatttt 21367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 21574563 - 21574458
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||||||||| || | |||| ||| | |||||||||||||| |||||| | |||| |||||||| ||  ||||||||||||| ||| ||||| ||||||    
T  21574563 ttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa-aagttatagcttatatgtaaacaatttaacttta 21574465  T
Q  179 ttttatc 185  Q
    |||||||    
T  21574464 ttttatc 21574458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 50952412 - 50952314
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa-aatatagcttatatgaaaataatt 170  Q
    ||||| ||||||||||| || |  ||||||||| |||||||||||||| ||||||||||||  ||| | |||||  |||||||||||||||||| ||||    
T  50952412 aacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttattacaacaactatatagcttatatgaaaacaatt 50952314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 20192585 - 20192709
Alignment:
Q  61 agagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatat 160  Q
    |||||||| || ||||| |||||||||||||| | |||||||| |||| ||||||||||| |||||   |||   || |||||||   ||||| ||||||    
T  20192585 agagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagttacaaaaacagcttatagattatat 20192684  T
Q  161 gaaaataatttgactttattttatc 185  Q
    |||||   |||||||||||||||||    
T  20192685 gaaaactgtttgactttattttatc 20192709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 36139957 - 36139845
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| ||||||||||| |||| |||||||| | ||||||| |||||| ||| ||||||||  ||   ||||||  ||||||||||| ||||  | ||||    
T  36139957 aacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatagtataatgaaacaacttatagcttatacgaaatcagtttg 36139858  T
Q  173 actttattttatc 185  Q
    |||||||||||||    
T  36139857 actttattttatc 36139845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 1395673 - 1395638
Alignment:
Q  150 atagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||||||||||||||||    
T  1395673 atagcttatatgaaaataatttgactttattttatc 1395638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 19679368 - 19679430
Alignment:
Q  122 tctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||  |||||||||||  ||||||||||| ||||| | ||||||||||||||||    
T  19679368 tctccaagatagtttataaaaacaacttatagcttataagaaaacagtttgactttattttat 19679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 24085352 - 24085442
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatg-aaaataatttgactttattttatc 185  Q
    |||||||| | ||||||| || ||| ||||||||||||| || ||||||||| |||||||||| || |||| || || |||||||||||||    
T  24085352 gctgttttcagcttattttcacaagttctccaagatagcttacaaaaacaaattatagcttatgtgaaaaacaaattcactttattttatc 24085442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 36646379 - 36646485
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||| |||||||| | |||||||| | |||||||| ||||  |||| | |||||| ||| |||||||  |||| |||||||||||| ||||  ||||||    
T  36646379 ttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataacttatatgaaaacaattatacttta 36646478  T
Q  179 ttttatc 185  Q
    |||||||    
T  36646479 ttttatc 36646485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 45541650 - 45541552
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataattt 171  Q
    ||||| ||||||||||| || | |||||||| |  |||||  |||||| | ||||||||||| ||| |||| ||| ||||||||||| |||||||||||    
T  45541650 aacagcttatgacatgttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaataaactatagcttatacgaaaataattt 45541552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 901976 - 901907
Alignment:
Q  100 ttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataat 169  Q
    |||| ||||||||| |||||| ||||||| ||||| |||||||||||| |||| | ||||| ||||||||    
T  901976 ttttcaacttattttcataagttctccaatatagcttataaaaacaaagtataacatatataaaaataat 901907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 32555039 - 32555084
Alignment:
Q  140 aaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||  ||||||||||| |||||||||||||||||||||||||    
T  32555039 aaaacaacttatagcttataggaaaataatttgactttattttatc 32555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 2318699 - 2318611
Alignment:
Q  98 tgttttaaacttatttccataagatctccaaga-tagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | |||||||| ||||| ||||||||| || | |||||||||||  ||||| ||||||||||| ||||||| || ||||||||    
T  2318699 tgttttcagcttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaaacaatttgatttgattttatc 2318611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 24887298 - 24887386
Alignment:
Q  97 ctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| | |||||| ||||||| |||||| |||||| ||| ||||||   | ||||||||||||| | | |||||||||||||||||    
T  24887298 ctgttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatc 24887386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 32703141 - 32703065
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatcaatattatagaaattgaaatagattatacataagcatttatatga 230  Q
    ||||||||||||||||| ||||||| |||||||||||  | ||||   ||| ||||||| |||||||||| |||||||||||    
T  32703141 tatagcttatatgaaaacaatttgagtttattttatc--ttttat---aatagaaatagcttatacataaacatttatatga 32703065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 1217777 - 1217900
Alignment:
Q  59 gaagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttat 158  Q
    ||||||||||| | ||||| |||||||||||||| | | |||||| | |||| || |||||| |||| | |||||| ||| ||||||   |||| ||||     
T  1217777 gaagagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttac 1217876  T
Q  159 atgaaaataatttgactttatttt 182  Q
    ||||||| ||||| |||| |||||    
T  1217877 atgaaaacaatttaacttcatttt 1217900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 24235680 - 24235786
Alignment:
Q  78 tttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttt 177  Q
    ||||||||||||||  |||||||||| | ||||||| || ||  || |||| ||||| ||| |||||||  ||||||||||||  ||||| |||||||||    
T  24235680 tttatgacatgtccttatgctgttttcagcttatttacacaacgtc-ccaatatagcttatgaaaacaacttatagcttatattcaaatagtttgacttt 24235778  T
Q  178 attttatc 185  Q
    || |||||    
T  24235779 atattatc 24235786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 51510218 - 51510289
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| |||||| |||| | ||| |||||||  ||||| |||||| |||||||||| ||||||    
T  51510218 cttatttccataagctctccacgataacttatgaaaacaacttatagtttatatcaaaataattttacttta 51510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 52323890 - 52323960
Alignment:
Q  78 tttatgacatgtccacatgctgttttaaacttatttc--cataagatctccaagatagcctataaaaacaa 146  Q
    ||||||||| ||||| | |||||||| ||||||||||  |||||| ||||||||||||| ||| |||||||    
T  52323890 tttatgacacgtccataagctgttttcaacttatttccacataagctctccaagatagcttatcaaaacaa 52323960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 28779369 - 28779327
Alignment:
Q  139 aaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    ||||||||  ||||||||||||||||||| |||||||||||||    
T  28779369 aaaaacaacttatagcttatatgaaaatagtttgactttattt 28779327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 44374642 - 44374747
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    ||||||||||| || | ||| |||| | ||||||||||| || ||||||||||| | ||   ||||||| | ||| || |||||||| ||||||||||||    
T  44374642 ttatgacatgtacataagctattttcaccttatttccattagctctccaagatatctta-cgaaacaaattttagattgtatgaaaacaatttgacttta 44374740  T
Q  179 ttttatc 185  Q
    |||||||    
T  44374741 ttttatc 44374747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 14548735 - 14548804
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    |||||||| | |||||||||||||| ||||||  ||| | ||| |||||||  |||||||||||||||||    
T  14548735 gctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaa 14548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 21872313 - 21872374
Alignment:
Q  124 tccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||| ||| |||||||  |||||||||||| |||| |||||||| ||||||||||    
T  21872313 tccaggatagcttatgaaaacaacttatagcttatatcaaaaaaatttgaccttattttatc 21872374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 52619082 - 52618969
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    |||| |||||||||||| || | ||| |||| | ||||||| || ||| ||| ||||||||| | | ||||||   |||| |||||||||||| |||||     
T  52619082 aacaatttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaattta 52618983  T
Q  173 actttattttatca 186  Q
    ||||||||| ||||    
T  52618982 actttatttaatca 52618969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 23315629 - 23315593
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| |||||||||| |||||||||||||||||||    
T  23315629 tatagcctatatgaaaacaatttgactttattttatc 23315593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 23785334 - 23785222
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| ||||| | |||||| | | |||||| | ||| |||||||||| |||||| || ||| | | ||||||   ||||||||||||||| | | ||||    
T  23785334 aacagcttatggcgtgtccataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaatacagtttg 23785235  T
Q  173 actttattttatc 185  Q
    |||||||||||||    
T  23785234 actttattttatc 23785222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 25195419 - 25195391
Alignment:
Q  157 atatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||||||||||||||||    
T  25195419 atatgaaaataatttgactttattttatc 25195391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 30956653 - 30956729
Alignment:
Q  109 tatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| ||||||| ||||||||||||| | | |||||||  |||||| ||||  |||| ||||| |||||||||||||    
T  30956653 tattcccataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatc 30956729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 30972465 - 30972541
Alignment:
Q  109 tatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| ||||||| ||||||||||||| | | |||||||  |||||| ||||  |||| ||||| |||||||||||||    
T  30972465 tattcccataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatc 30972541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 32069194 - 32069103
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatcaatattatagaaat 199  Q
    ||||||| |||||  ||||||||||||| ||| ||||||    ||||||| ||||||| || |||||||||||||||||  | ||||||||||    
T  32069194 cttattttcataatctctccaagatagcttattaaaacagttgatagcttttatgaaatta-tttgactttattttatcttttttatagaaat 32069103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 33405200 - 33405268
Alignment:
Q  115 cataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttta 183  Q
    |||||| ||| ||||||||| ||| ||||||   ||||||||||||||||| || || |||||||||||    
T  33405200 cataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttatttta 33405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 36101647 - 36101535
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| ||||||||||| |||| |||||||| | ||||||| |||||| ||| || |||||  ||   ||||||  ||||| ||||| ||||  | ||||    
T  36101647 aacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatagtataatgaaacaacttatagattatacgaaatcagtttg 36101548  T
Q  173 actttattttatc 185  Q
    |||||||||||||    
T  36101547 actttattttatc 36101535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 37689451 - 37689487
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  37689451 tatagcttatatgaaaataatttaactttactttatc 37689487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 40122800 - 40122855
Alignment:
Q  129 gatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| |||||||||||  |||||||| |||||||| | |||||||||||||||||    
T  40122800 gatagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatc 40122855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 38047886 - 38047958
Alignment:
Q  113 tccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||| |||||| |||||| ||| ||||||  ||||||  ||||||||||||||||||||||||||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatc 38047958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 12425625 - 12425538
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| ||||||||| |||||| ||||||||||||| | | ||||||   ||||||||||| ||||| ||||| |||||||||||||    
T  12425625 tgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatc 12425538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 12975400 - 12975315
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttat 184  Q
    |||||| |||||||| ||||||| ||||||||||||| ||| || |||   ||||||||||||||||| ||||||| ||||||||||    
T  12975400 tgttttcaacttatt-ccataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttat 12975315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 10272447 - 10272534
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||| | ||||||| |||||  |||||||||| || ||| |||||||  ||||||||||| ||||| |||||||||| ||||||||    
T  10272447 tgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttatc 10272534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 34205265 - 34205206
Alignment:
Q  126 caagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||| ||| |||||||  |||||||||||| ||||||||||||||||| ||||||    
T  34205265 caagatagcttatgaaaacaacttatagcttatataaaaataatttgactttactttatc 34205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 41957428 - 41957551
Alignment:
Q  59 gaagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttat 158  Q
    ||||||||||| | ||||| |||||||||||||| | | |||||| | ||||||| |||||| |||| | |||||| ||| ||||||   |||| ||||     
T  41957428 gaagagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttac 41957527  T
Q  159 atgaaaataatttgactttatttt 182  Q
    ||||||| ||||| |||| |||||    
T  41957528 atgaaaacaatttaacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 912677 - 912751
Alignment:
Q  111 tttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataa-tttgactttattttat 184  Q
    |||||||||| | ||||||||||  |||||||||||  ||| ||||||||||||| || ||||||||||||||||    
T  912677 tttccataagctttccaagatagtttataaaaacaacttattgcttatatgaaaacaattttgactttattttat 912751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 26516445 - 26516367
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||| |||| | ||||||| ||| ||||||   |||| ||||||||||| || |||||||||||||||||    
T  26516445 cttatttccataaaatctgctagatagcttatgaaaacagtttataacttatatgaaagtagtttgactttattttatc 26516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 39105509 - 39105435
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    ||||||| |||||| ||||||||||||| ||| |||||| | ||||||||||| ||||| ||||| |||| ||||    
T  39105509 cttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcattt 39105435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 4273368 - 4273477
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| ||||||| |||| | | | |||||| |||||||| | ||||| |||| |||||| | | |||||||| | |||||||||| | |||| ||||||    
T  4273368 aacagcttatgacttgtctataagttgttttcaacttattgctataagctctcaaagataccgtgtaaaaacagattatagcttattttaaaacaatttg 4273467  T
Q  173 actttatttt 182  Q
    ||||||||||    
T  4273468 actttatttt 4273477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 14295585 - 14295473
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    ||||| |||||| ||||| | | |||||||| | |||| ||| | ||| |||||| |||||| ||  ||||||   ||||||||||||||||| | ||||    
T  14295585 aacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttg 14295486  T
Q  173 actttattttatc 185  Q
    |||||||||||||    
T  14295485 actttattttatc 14295473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 35135729 - 35135765
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35135729 tatagcttatatgaaaatagtttgactttattttatc 35135765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 17368749 - 17368682
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa 146  Q
    ||||||||||| || |||| ||||| | |||||||||||||  ||||||||||||| ||| |||||||    
T  17368749 ttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaa 17368682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 26005013 - 26005080
Alignment:
Q  98 tgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    |||||| | |||||||||||||| |||||||| |||| ||| ||||||  |||||||||||| |||||    
T  26005013 tgttttcaccttatttccataagctctccaagctagcttatgaaaacagtatatagcttatacgaaaa 26005080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 32969185 - 32969220
Alignment:
Q  150 atagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32969185 atagcttatataaaaataatttgactttattttatc 32969220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 34690943 - 34690841
Alignment:
Q  82 tgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    ||||||||||| | | |||| |  ||||||||||||||| |||||||||| || ||| | |||||  |||||| ||||||||| || | |||||||||||    
T  34690943 tgacatgtccataagttgttatcgacttatttccataagctctccaagatggcttatgagaacaacttatagc-tatatgaaagtattgtgactttattt 34690845  T
Q  182 tatc 185  Q
    ||||    
T  34690844 tatc 34690841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 9202773 - 9202851
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||| |||||| ||| ||||||| | ||| ||||||   ||| ||||||||||||| ||||| |||||||||||||    
T  9202773 cttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatc 9202851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 10391421 - 10391331
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataaga-tctccaagatagcctataaaaacaaaatatagcttatatga 162  Q
    |||| ||||||||||||| |   | |||||| ||||||||||| ||| | |||| | |||||| |||||||||||| ||||||||||||||    
T  10391421 aacactttatgacatgtctattagttgttttcaacttatttccttaaaactctctaggatagcttataaaaacaaattatagcttatatga 10391331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 18875437 - 18875331
Alignment:
Q  76 agtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgact 175  Q
    |||||||| |||| ||| | | |||||| ||||| |||||||||| |||||| |||| | ||| ||||||   |||| ||| |||||||  |||||||||    
T  18875437 agtttatggcatgcccataagttgttttcaacttgtttccataagctctccaggatatcttattaaaacagcttataacttgtatgaaatcaatttgact 18875338  T
Q  176 ttatttt 182  Q
    |||||||    
T  18875337 ttatttt 18875331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 32172726 - 32172620
Alignment:
Q  79 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 178  Q
    |||||||||||||| | ||  |||| | ||||||||||| || ||| || |||||| ||| ||||||   ||||||||||||| ||| || ||||||| |    
T  32172726 ttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttca 32172627  T
Q  179 ttttatc 185  Q
    |||||||    
T  32172626 ttttatc 32172620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 33533533 - 33533591
Alignment:
Q  76 agtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagc 134  Q
    |||||||||||| | || | | |||||| |||||||||||||||| |||||||||||||    
T  33533533 agtttatgacatattcataagttgttttcaacttatttccataagctctccaagatagc 33533591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 35550993 - 35550916
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||| ||||| || |||||| |||||  ||||||||||   ||||| |||||||||||||| ||||||||||||||||    
T  35550993 cttatctccattagttctccaggataggttataaaaacagcttatagtttatatgaaaataa-ttgactttattttatc 35550916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 35553213 - 35553287
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattt 181  Q
    |||||||||||||| ||||||  ||||| ||| |||| |   ||||||||||||||||| |||||||||| ||||    
T  35553213 cttatttccataagctctccagaatagcgtatgaaaatagtttatagcttatatgaaaagaatttgacttaattt 35553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 3951645 - 3951584
Alignment:
Q  122 tctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttatttta 183  Q
    |||||| |||||| ||||||||||   ||||||| ||||||||||||||||| || ||||||    
T  3951645 tctccaggatagcttataaaaacagcttatagctaatatgaaaataatttgatttcatttta 3951584  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 8158371 - 8158404
Alignment:
Q  152 agcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||||||| |||||||||||||    
T  8158371 agcttatatgaaaataatttaactttattttatc 8158404  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 31723897 - 31723824
Alignment:
Q  60 aagagcttacaggaacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatag 133  Q
    ||||||||||  |||||| || || |||||||| | |||||||||| ||| ||||| |||| ||||||||||||    
T  31723897 aagagcttacgcgaacagcttgtgtcatgtccataagctgttttaagcttttttccgtaaggtctccaagatag 31723824  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 32408617 - 32408682
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttg 172  Q
    |||||||||||||| ||| || |||||| ||| |||| |   ||||||||||||||||||||||||    
T  32408617 cttatttccataagctcttcaggatagcttatgaaaatagtttatagcttatatgaaaataatttg 32408682  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 36539762 - 36539713
Alignment:
Q  136 tataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||||  ||||||||||||||||| |  ||||||||||||||||    
T  36539762 tataaaaacaacttatagcttatatgaaaacaggttgactttattttatc 36539713  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 37588374 - 37588443
Alignment:
Q  96 gctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    |||||||| | |||||||||||||| ||||||  ||| | ||| |||||||  |||||||||||||||||    
T  37588374 gctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaa 37588443  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 41277392 - 41277453
Alignment:
Q  124 tccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||| ||| |||||||  | || |||||||||||| | |||||||||||||||||    
T  41277392 tccaagatagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatc 41277453  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 583840 - 583876
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| | |||||||||||||||||    
T  583840 tatagcttatatgaaaacagtttgactttattttatc 583876  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 7319451 - 7319379
Alignment:
Q  107 cttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttat 179  Q
    |||||||  ||||| ||||||||||||| ||  ||||||   ||||||||||||||||| ||||| |||||||    
T  7319451 cttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactttat 7319379  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 13604840 - 13604932
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    ||||| |||||||||||||| | | |||||| ||||||||| |||||| ||| ||||||| | ||| ||||||   || || |||||||||||    
T  13604840 aacagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaa 13604932  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 21768188 - 21768280
Alignment:
Q  73 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaa 165  Q
    ||||| |||||||||||||| | |||||||| ||||||||| | |||| ||| ||||||| | ||| ||||||   || || |||||||||||    
T  21768188 aacagcttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaa 21768280  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 32059656 - 32059692
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||||| | |||||||||||||||||    
T  32059656 tatagcttatatgaaaacagtttgactttattttatc 32059692  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 37611215 - 37611279
Alignment:
Q  82 tgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa 146  Q
    |||||||| || | |||||||| |  ||||||||||||| ||||||||||||| ||| |||||||    
T  37611215 tgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37611279  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 37787945 - 37788009
Alignment:
Q  82 tgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa 146  Q
    |||||||| || | |||||||| |  ||||||||||||| ||||||||||||| ||| |||||||    
T  37787945 tgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37788009  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 39750146 - 39750110
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttatc 185  Q
    |||| |||||||||||||| |||||||||||||||||    
T  39750146 tataacttatatgaaaatagtttgactttattttatc 39750110  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 27603 - 27543
Alignment:
Q  125 ccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgactttattttatc 185  Q
    |||||||||  ||| |||||||  ||||| ||||||||||| |||||||||||||||||||    
T  27603 ccaagatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatc 27543  T

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Target: scaffold0153 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 6565 - 6600
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6565 tatagcttatatgaaaatagtttgactttattttat 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 13585 - 13620
Alignment:
Q  149 tatagcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13585 tatagcttatatgaaaatagtttgactttattttat 13620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 184
Target Start/End: Original strand, 69014 - 69045
Alignment:
Q  153 gcttatatgaaaataatttgactttattttat 184  Q
    ||||||||||||||||||||||||||||||||    
T  69014 gcttatatgaaaataatttgactttattttat 69045  T

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Target: scaffold0349 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 18436 - 18470
Alignment:
Q  151 tagcttatatgaaaataatttgactttattttatc 185  Q
    ||||||||||||||| |||||||||||||||||||    
T  18436 tagcttatatgaaaagaatttgactttattttatc 18470  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 185
Target Start/End: Original strand, 34072 - 34100
Alignment:
Q  157 atatgaaaataatttgactttattttatc 185  Q
    |||||||||||||||||||||||||||||    
T  34072 atatgaaaataatttgactttattttatc 34100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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