View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15654_low_4 (Length: 249)
Name: NF15654_low_4
Description: NF15654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15654_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 240
Target Start/End: Complemental strand, 1803448 - 1803277
Alignment:
| Q |
74 |
ctgacacaaggagtcggtcgcctgttgggtcatgaagaaagcacgggggttcatctactatattagatcaagaataataaaacgagagagtttgacaaca |
173 |
Q |
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| T |
1803448 |
ctgacacaaggagtcggtcacatgttgggtcatgaaaaaagtataggggttcatctactatattagatcaagaataataaaacgagagagtttgacaaca |
1803349 |
T |
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| Q |
174 |
catcttaaccaaaaatcttaaagacatttaatttataagtt-----ctctcaatgatatattcttcgacatc |
240 |
Q |
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||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| ||||| |
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| T |
1803348 |
catcttaaccaaaaactttaaagacatttaatttataagctaagtcctctcaatgatatattcttcaacatc |
1803277 |
T |
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